Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020490.01.T01 | XP_013455787.1 | 96.032 | 252 | 10 | 0 | 1 | 252 | 1 | 252 | 4.33E-175 | 496 |
| MsG0480020490.01.T01 | XP_013455787.1 | 86.667 | 45 | 6 | 0 | 266 | 310 | 146 | 190 | 2.13E-12 | 78.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020490.01.T01 | Q94KL7 | 56.299 | 254 | 107 | 1 | 2 | 251 | 3 | 256 | 6.07E-98 | 293 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020490.01.T01 | I3SBG4 | 96.032 | 252 | 10 | 0 | 1 | 252 | 1 | 252 | 2.07e-175 | 496 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0380014103.01 | MsG0480020490.01 | 0.800121 | 1.671796e-48 | 7.721986e-46 |
| MsG0480020490.01 | MsG0780036596.01 | 0.819449 | 1.154710e-52 | 8.888780e-50 |
| MsG0480020490.01 | MsG0880041858.01 | 0.807711 | 4.423727e-50 | 2.481463e-47 |
| MsG0480020490.01 | MsG0880043157.01 | 0.816254 | 6.079838e-52 | 4.286620e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020490.01.T01 | MTR_4g052350 | 96.032 | 252 | 10 | 0 | 1 | 252 | 1 | 252 | 5.24e-179 | 496 |
| MsG0480020490.01.T01 | MTR_4g052350 | 86.667 | 45 | 6 | 0 | 266 | 310 | 146 | 190 | 2.58e-16 | 78.2 |
| MsG0480020490.01.T01 | MTR_4g052340 | 83.333 | 252 | 42 | 0 | 1 | 252 | 1 | 252 | 9.07e-160 | 447 |
| MsG0480020490.01.T01 | MTR_4g052340 | 55.224 | 67 | 24 | 1 | 250 | 310 | 124 | 190 | 5.20e-13 | 68.6 |
| MsG0480020490.01.T01 | MTR_4g052300 | 82.716 | 243 | 42 | 0 | 10 | 252 | 4 | 246 | 2.65e-147 | 415 |
| MsG0480020490.01.T01 | MTR_4g052300 | 77.778 | 45 | 10 | 0 | 266 | 310 | 140 | 184 | 4.34e-14 | 71.6 |
| MsG0480020490.01.T01 | MTR_4g052320 | 84.016 | 244 | 38 | 1 | 10 | 252 | 4 | 247 | 2.86e-143 | 405 |
| MsG0480020490.01.T01 | MTR_4g052320 | 75.556 | 45 | 11 | 0 | 266 | 310 | 140 | 184 | 1.79e-13 | 69.7 |
| MsG0480020490.01.T01 | MTR_7g105460 | 57.088 | 261 | 105 | 2 | 13 | 266 | 12 | 272 | 8.14e-95 | 282 |
| MsG0480020490.01.T01 | MTR_7g071680 | 52.091 | 263 | 103 | 4 | 12 | 252 | 27 | 288 | 6.66e-86 | 261 |
| MsG0480020490.01.T01 | MTR_7g107670 | 51.807 | 249 | 111 | 3 | 12 | 252 | 31 | 278 | 8.85e-79 | 242 |
| MsG0480020490.01.T01 | MTR_7g105590 | 61.413 | 184 | 71 | 0 | 12 | 195 | 6 | 189 | 1.54e-76 | 233 |
| MsG0480020490.01.T01 | MTR_7g110130 | 50.612 | 245 | 117 | 2 | 12 | 252 | 4 | 248 | 1.27e-75 | 233 |
| MsG0480020490.01.T01 | MTR_2g090165 | 49.796 | 245 | 118 | 3 | 12 | 252 | 4 | 247 | 7.42e-74 | 229 |
| MsG0480020490.01.T01 | MTR_7g110140 | 50.000 | 244 | 117 | 3 | 13 | 252 | 5 | 247 | 3.86e-73 | 227 |
| MsG0480020490.01.T01 | MTR_3g020670 | 49.077 | 271 | 127 | 4 | 8 | 268 | 10 | 279 | 4.22e-73 | 227 |
| MsG0480020490.01.T01 | MTR_7g105580 | 51.012 | 247 | 96 | 4 | 12 | 253 | 6 | 232 | 1.28e-72 | 225 |
| MsG0480020490.01.T01 | MTR_7g083870 | 50.800 | 250 | 113 | 3 | 12 | 252 | 33 | 281 | 1.61e-71 | 224 |
| MsG0480020490.01.T01 | MTR_6g023590 | 45.312 | 256 | 134 | 4 | 1 | 251 | 1 | 255 | 8.41e-71 | 221 |
| MsG0480020490.01.T01 | MTR_4g078630 | 47.036 | 253 | 120 | 4 | 10 | 251 | 15 | 264 | 2.23e-66 | 210 |
| MsG0480020490.01.T01 | MTR_6g023610 | 46.311 | 244 | 126 | 3 | 13 | 251 | 12 | 255 | 1.98e-65 | 207 |
| MsG0480020490.01.T01 | MTR_7g110160 | 47.347 | 245 | 106 | 3 | 12 | 252 | 4 | 229 | 2.43e-65 | 206 |
| MsG0480020490.01.T01 | MTR_6g023950 | 45.525 | 257 | 134 | 4 | 1 | 252 | 1 | 256 | 1.06e-64 | 205 |
| MsG0480020490.01.T01 | MTR_6g023990 | 44.262 | 244 | 131 | 3 | 13 | 251 | 13 | 256 | 2.15e-64 | 204 |
| MsG0480020490.01.T01 | MTR_6g023910 | 44.672 | 244 | 130 | 3 | 13 | 251 | 12 | 255 | 1.11e-63 | 202 |
| MsG0480020490.01.T01 | MTR_6g023600 | 44.141 | 256 | 137 | 4 | 1 | 251 | 1 | 255 | 3.31e-63 | 201 |
| MsG0480020490.01.T01 | MTR_7g105570 | 45.385 | 260 | 84 | 3 | 14 | 266 | 21 | 229 | 2.25e-62 | 198 |
| MsG0480020490.01.T01 | MTR_6g035395 | 46.531 | 245 | 113 | 4 | 12 | 252 | 3 | 233 | 4.20e-62 | 198 |
| MsG0480020490.01.T01 | MTR_6g023600 | 43.359 | 256 | 133 | 5 | 1 | 251 | 1 | 249 | 1.37e-58 | 189 |
| MsG0480020490.01.T01 | MTR_4g084800 | 62.879 | 132 | 49 | 0 | 12 | 143 | 11 | 142 | 1.38e-55 | 178 |
| MsG0480020490.01.T01 | MTR_3g113870 | 49.000 | 200 | 96 | 2 | 3 | 202 | 15 | 208 | 1.56e-55 | 181 |
| MsG0480020490.01.T01 | MTR_3g085740 | 32.245 | 245 | 156 | 6 | 10 | 249 | 71 | 310 | 1.71e-31 | 120 |
| MsG0480020490.01.T01 | MTR_1g082760 | 33.600 | 250 | 150 | 7 | 13 | 251 | 39 | 283 | 3.41e-25 | 103 |
| MsG0480020490.01.T01 | MTR_4g058840 | 32.245 | 245 | 156 | 6 | 14 | 249 | 11 | 254 | 6.95e-24 | 99.0 |
| MsG0480020490.01.T01 | MTR_4g058820 | 32.245 | 245 | 156 | 6 | 14 | 249 | 11 | 254 | 6.95e-24 | 99.0 |
| MsG0480020490.01.T01 | MTR_7g113650 | 29.600 | 250 | 160 | 7 | 13 | 251 | 39 | 283 | 8.78e-23 | 96.3 |
| MsG0480020490.01.T01 | MTR_4g058810 | 31.429 | 245 | 158 | 6 | 14 | 249 | 11 | 254 | 3.24e-22 | 94.4 |
| MsG0480020490.01.T01 | MTR_1g051165 | 30.588 | 255 | 162 | 6 | 12 | 252 | 12 | 265 | 3.43e-22 | 94.7 |
| MsG0480020490.01.T01 | MTR_4g131740 | 31.076 | 251 | 156 | 8 | 13 | 251 | 39 | 284 | 8.71e-21 | 90.9 |
| MsG0480020490.01.T01 | MTR_8g096580 | 30.769 | 234 | 136 | 9 | 14 | 235 | 45 | 264 | 3.47e-20 | 89.7 |
| MsG0480020490.01.T01 | MTR_8g442750 | 30.116 | 259 | 149 | 7 | 14 | 252 | 14 | 260 | 3.77e-20 | 89.4 |
| MsG0480020490.01.T01 | MTR_7g094510 | 28.309 | 272 | 146 | 11 | 1 | 249 | 1 | 246 | 1.44e-18 | 84.0 |
| MsG0480020490.01.T01 | MTR_3g068155 | 31.301 | 246 | 150 | 9 | 14 | 249 | 19 | 255 | 1.69e-18 | 84.3 |
| MsG0480020490.01.T01 | MTR_4g086400 | 31.496 | 254 | 145 | 11 | 16 | 254 | 6 | 245 | 2.58e-18 | 85.9 |
| MsG0480020490.01.T01 | MTR_4g097510 | 31.156 | 199 | 132 | 4 | 15 | 211 | 3 | 198 | 4.21e-18 | 83.2 |
| MsG0480020490.01.T01 | MTR_4g086410 | 29.762 | 252 | 152 | 8 | 16 | 254 | 6 | 245 | 6.81e-18 | 84.7 |
| MsG0480020490.01.T01 | MTR_4g132850 | 27.823 | 248 | 163 | 7 | 12 | 252 | 5 | 243 | 7.06e-18 | 82.0 |
| MsG0480020490.01.T01 | MTR_7g105560 | 67.857 | 56 | 18 | 0 | 12 | 67 | 11 | 66 | 1.04e-17 | 79.3 |
| MsG0480020490.01.T01 | MTR_4g064887 | 28.916 | 249 | 156 | 10 | 14 | 251 | 15 | 253 | 2.08e-17 | 80.9 |
| MsG0480020490.01.T01 | MTR_3g068175 | 31.373 | 204 | 123 | 7 | 14 | 208 | 17 | 212 | 3.49e-17 | 80.5 |
| MsG0480020490.01.T01 | MTR_1196s0010 | 27.692 | 260 | 152 | 8 | 15 | 256 | 275 | 516 | 5.85e-17 | 81.6 |
| MsG0480020490.01.T01 | MTR_7g063390 | 29.545 | 264 | 163 | 10 | 1 | 249 | 1 | 256 | 1.80e-16 | 78.2 |
| MsG0480020490.01.T01 | MTR_4g064887 | 32.663 | 199 | 117 | 8 | 14 | 203 | 15 | 205 | 2.22e-16 | 77.4 |
| MsG0480020490.01.T01 | MTR_3g068070 | 31.000 | 200 | 125 | 7 | 14 | 206 | 15 | 208 | 3.50e-16 | 77.4 |
| MsG0480020490.01.T01 | MTR_3g068085 | 31.343 | 201 | 123 | 9 | 14 | 206 | 15 | 208 | 1.11e-15 | 76.3 |
| MsG0480020490.01.T01 | MTR_4g064883 | 28.689 | 244 | 159 | 9 | 14 | 249 | 14 | 250 | 2.43e-15 | 75.1 |
| MsG0480020490.01.T01 | MTR_3g068175 | 30.769 | 208 | 123 | 8 | 14 | 208 | 17 | 216 | 3.33e-15 | 75.1 |
| MsG0480020490.01.T01 | MTR_7g063320 | 31.474 | 251 | 147 | 9 | 14 | 249 | 15 | 255 | 3.75e-15 | 74.7 |
| MsG0480020490.01.T01 | MTR_7g063330 | 29.032 | 248 | 156 | 9 | 14 | 249 | 15 | 254 | 4.16e-15 | 74.3 |
| MsG0480020490.01.T01 | MTR_3g087850 | 31.016 | 187 | 107 | 5 | 18 | 195 | 30 | 203 | 1.49e-14 | 73.2 |
| MsG0480020490.01.T01 | MTR_3g068065 | 30.612 | 196 | 123 | 7 | 14 | 202 | 17 | 206 | 1.60e-14 | 72.8 |
| MsG0480020490.01.T01 | MTR_7g063270 | 29.658 | 263 | 163 | 10 | 1 | 249 | 1 | 255 | 3.31e-14 | 72.0 |
| MsG0480020490.01.T01 | MTR_8g096620 | 26.190 | 210 | 149 | 4 | 16 | 222 | 47 | 253 | 8.60e-14 | 71.6 |
| MsG0480020490.01.T01 | MTR_3g087860 | 30.460 | 174 | 100 | 4 | 30 | 195 | 28 | 188 | 9.00e-14 | 70.9 |
| MsG0480020490.01.T01 | MTR_7g094520 | 26.122 | 245 | 168 | 4 | 14 | 249 | 11 | 251 | 1.48e-13 | 70.1 |
| MsG0480020490.01.T01 | MTR_4g064883 | 29.612 | 206 | 129 | 8 | 14 | 209 | 14 | 213 | 1.59e-13 | 68.9 |
| MsG0480020490.01.T01 | MTR_7g063260 | 30.804 | 224 | 136 | 8 | 1 | 213 | 1 | 216 | 2.88e-13 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020490.01.T01 | AT3G51680 | 52.692 | 260 | 104 | 5 | 12 | 252 | 30 | 289 | 5.22e-81 | 248 |
| MsG0480020490.01.T01 | AT1G52340 | 50.394 | 254 | 113 | 3 | 12 | 252 | 16 | 269 | 8.97e-75 | 232 |
| MsG0480020490.01.T01 | AT2G47140 | 50.410 | 244 | 116 | 3 | 12 | 251 | 4 | 246 | 8.54e-74 | 228 |
| MsG0480020490.01.T01 | AT4G03140 | 51.807 | 249 | 111 | 3 | 12 | 252 | 76 | 323 | 1.27e-73 | 231 |
| MsG0480020490.01.T01 | AT3G26770 | 50.000 | 250 | 115 | 4 | 12 | 252 | 39 | 287 | 3.58e-73 | 228 |
| MsG0480020490.01.T01 | AT3G26760 | 44.444 | 261 | 133 | 4 | 3 | 252 | 25 | 284 | 4.33e-69 | 218 |
| MsG0480020490.01.T01 | AT2G47130 | 48.374 | 246 | 115 | 5 | 13 | 251 | 5 | 245 | 1.26e-67 | 213 |
| MsG0480020490.01.T01 | AT3G29250 | 45.749 | 247 | 123 | 5 | 13 | 252 | 5 | 247 | 2.28e-64 | 204 |
| MsG0480020490.01.T01 | AT3G29250 | 45.749 | 247 | 123 | 5 | 13 | 252 | 41 | 283 | 7.54e-64 | 204 |
| MsG0480020490.01.T01 | AT2G47120 | 42.322 | 267 | 129 | 7 | 9 | 260 | 2 | 258 | 2.00e-63 | 202 |
| MsG0480020490.01.T01 | AT3G29250 | 45.238 | 252 | 126 | 6 | 9 | 252 | 38 | 285 | 5.68e-63 | 202 |
| MsG0480020490.01.T01 | AT2G47120 | 42.586 | 263 | 126 | 7 | 13 | 260 | 5 | 257 | 1.09e-62 | 200 |
| MsG0480020490.01.T01 | AT3G29260 | 45.082 | 244 | 128 | 4 | 12 | 251 | 4 | 245 | 2.85e-62 | 199 |
| MsG0480020490.01.T01 | AT3G42960 | 44.882 | 254 | 123 | 6 | 12 | 252 | 6 | 255 | 7.01e-52 | 172 |
| MsG0480020490.01.T01 | AT1G24360 | 32.227 | 211 | 134 | 3 | 11 | 216 | 71 | 277 | 9.12e-27 | 107 |
| MsG0480020490.01.T01 | AT1G63380 | 31.727 | 249 | 159 | 6 | 14 | 252 | 17 | 264 | 8.98e-25 | 101 |
| MsG0480020490.01.T01 | AT1G63380 | 31.727 | 249 | 159 | 6 | 14 | 252 | 22 | 269 | 1.00e-24 | 101 |
| MsG0480020490.01.T01 | AT1G63380 | 31.727 | 249 | 159 | 6 | 14 | 252 | 15 | 262 | 1.05e-24 | 101 |
| MsG0480020490.01.T01 | AT1G63380 | 31.727 | 249 | 159 | 6 | 14 | 252 | 19 | 266 | 1.07e-24 | 101 |
| MsG0480020490.01.T01 | AT1G62610 | 30.924 | 249 | 161 | 6 | 14 | 252 | 13 | 260 | 6.35e-24 | 99.4 |
| MsG0480020490.01.T01 | AT3G55290 | 30.924 | 249 | 162 | 6 | 13 | 252 | 16 | 263 | 6.50e-24 | 99.4 |
| MsG0480020490.01.T01 | AT1G62610 | 30.924 | 249 | 161 | 6 | 14 | 252 | 14 | 261 | 6.73e-24 | 99.4 |
| MsG0480020490.01.T01 | AT1G62610 | 30.924 | 249 | 161 | 6 | 14 | 252 | 15 | 262 | 7.29e-24 | 99.0 |
| MsG0480020490.01.T01 | AT3G55290 | 30.924 | 249 | 162 | 6 | 13 | 252 | 17 | 264 | 7.48e-24 | 99.4 |
| MsG0480020490.01.T01 | AT1G62610 | 30.924 | 249 | 161 | 6 | 14 | 252 | 19 | 266 | 8.58e-24 | 99.0 |
| MsG0480020490.01.T01 | AT1G54870 | 30.597 | 268 | 162 | 9 | 1 | 251 | 65 | 325 | 1.19e-22 | 97.1 |
| MsG0480020490.01.T01 | AT1G54870 | 30.597 | 268 | 162 | 9 | 1 | 251 | 67 | 327 | 1.20e-22 | 97.1 |
| MsG0480020490.01.T01 | AT3G55310 | 31.349 | 252 | 157 | 7 | 13 | 252 | 16 | 263 | 1.25e-22 | 95.9 |
| MsG0480020490.01.T01 | AT3G05260 | 30.000 | 250 | 158 | 7 | 13 | 251 | 36 | 279 | 5.32e-22 | 94.4 |
| MsG0480020490.01.T01 | AT2G17845 | 29.528 | 254 | 160 | 7 | 14 | 252 | 47 | 296 | 2.85e-21 | 92.8 |
| MsG0480020490.01.T01 | AT2G47150 | 30.962 | 239 | 113 | 7 | 14 | 251 | 1 | 188 | 3.44e-21 | 90.1 |
| MsG0480020490.01.T01 | AT2G30670 | 29.461 | 241 | 165 | 3 | 14 | 251 | 7 | 245 | 4.09e-21 | 91.3 |
| MsG0480020490.01.T01 | AT3G46170 | 30.040 | 253 | 159 | 7 | 13 | 252 | 25 | 272 | 4.09e-21 | 91.7 |
| MsG0480020490.01.T01 | AT2G29310 | 30.453 | 243 | 160 | 6 | 14 | 251 | 7 | 245 | 3.92e-20 | 88.6 |
| MsG0480020490.01.T01 | AT2G29330 | 29.150 | 247 | 158 | 7 | 14 | 251 | 7 | 245 | 1.90e-19 | 86.7 |
| MsG0480020490.01.T01 | AT2G29340 | 29.675 | 246 | 158 | 7 | 14 | 251 | 7 | 245 | 3.00e-19 | 87.0 |
| MsG0480020490.01.T01 | AT2G29340 | 31.313 | 198 | 131 | 3 | 14 | 208 | 7 | 202 | 3.07e-19 | 86.3 |
| MsG0480020490.01.T01 | AT2G29340 | 31.795 | 195 | 128 | 3 | 14 | 205 | 7 | 199 | 5.72e-19 | 84.0 |
| MsG0480020490.01.T01 | AT2G29340 | 31.795 | 195 | 128 | 3 | 14 | 205 | 7 | 199 | 5.72e-19 | 84.0 |
| MsG0480020490.01.T01 | AT5G50600 | 28.070 | 228 | 151 | 6 | 14 | 235 | 45 | 265 | 1.24e-18 | 85.9 |
| MsG0480020490.01.T01 | AT5G50700 | 28.070 | 228 | 151 | 6 | 14 | 235 | 45 | 265 | 1.24e-18 | 85.9 |
| MsG0480020490.01.T01 | AT5G50770 | 31.839 | 223 | 143 | 8 | 16 | 233 | 47 | 265 | 2.39e-18 | 84.7 |
| MsG0480020490.01.T01 | AT5G10050 | 30.055 | 183 | 120 | 4 | 15 | 195 | 6 | 182 | 3.43e-18 | 83.6 |
| MsG0480020490.01.T01 | AT2G29310 | 32.308 | 195 | 127 | 3 | 14 | 205 | 7 | 199 | 3.84e-18 | 81.6 |
| MsG0480020490.01.T01 | AT4G05530 | 32.400 | 250 | 149 | 10 | 12 | 252 | 7 | 245 | 4.56e-18 | 82.8 |
| MsG0480020490.01.T01 | AT5G18210 | 28.626 | 262 | 163 | 10 | 7 | 252 | 1 | 254 | 4.89e-18 | 82.8 |
| MsG0480020490.01.T01 | AT2G29300 | 29.555 | 247 | 158 | 8 | 14 | 251 | 7 | 246 | 8.16e-18 | 82.4 |
| MsG0480020490.01.T01 | AT2G29300 | 29.555 | 247 | 158 | 8 | 14 | 251 | 7 | 246 | 9.70e-18 | 82.0 |
| MsG0480020490.01.T01 | AT1G07450 | 27.686 | 242 | 167 | 6 | 14 | 251 | 8 | 245 | 1.02e-17 | 81.6 |
| MsG0480020490.01.T01 | AT5G06060 | 28.163 | 245 | 159 | 8 | 14 | 249 | 9 | 245 | 2.67e-17 | 80.9 |
| MsG0480020490.01.T01 | AT1G49670 | 31.683 | 202 | 124 | 4 | 16 | 204 | 6 | 206 | 4.32e-17 | 82.4 |
| MsG0480020490.01.T01 | AT1G07440 | 27.935 | 247 | 160 | 8 | 14 | 251 | 12 | 249 | 4.41e-17 | 80.1 |
| MsG0480020490.01.T01 | AT5G65205 | 31.148 | 183 | 118 | 4 | 15 | 195 | 7 | 183 | 4.79e-17 | 80.5 |
| MsG0480020490.01.T01 | AT1G49670 | 31.683 | 202 | 124 | 4 | 16 | 204 | 6 | 206 | 5.14e-17 | 82.0 |
| MsG0480020490.01.T01 | AT1G10310 | 30.097 | 206 | 141 | 3 | 3 | 207 | 4 | 207 | 1.89e-16 | 77.8 |
| MsG0480020490.01.T01 | AT5G50690 | 30.337 | 178 | 115 | 4 | 13 | 185 | 44 | 217 | 2.23e-16 | 77.8 |
| MsG0480020490.01.T01 | AT5G50590 | 30.337 | 178 | 115 | 4 | 13 | 185 | 44 | 217 | 2.23e-16 | 77.8 |
| MsG0480020490.01.T01 | AT3G12800 | 31.746 | 252 | 155 | 7 | 14 | 252 | 10 | 257 | 3.59e-16 | 78.2 |
| MsG0480020490.01.T01 | AT5G18210 | 29.084 | 251 | 154 | 10 | 7 | 241 | 1 | 243 | 4.76e-16 | 77.4 |
| MsG0480020490.01.T01 | AT5G50690 | 30.337 | 178 | 115 | 4 | 13 | 185 | 44 | 217 | 4.85e-16 | 77.8 |
| MsG0480020490.01.T01 | AT5G50590 | 30.337 | 178 | 115 | 4 | 13 | 185 | 44 | 217 | 4.85e-16 | 77.8 |
| MsG0480020490.01.T01 | AT4G13180 | 30.153 | 262 | 161 | 9 | 1 | 249 | 1 | 253 | 6.57e-16 | 76.6 |
| MsG0480020490.01.T01 | AT2G29150 | 32.338 | 201 | 122 | 7 | 14 | 207 | 16 | 209 | 1.02e-15 | 76.3 |
| MsG0480020490.01.T01 | AT3G47350 | 27.670 | 206 | 133 | 6 | 11 | 208 | 41 | 238 | 1.71e-15 | 76.3 |
| MsG0480020490.01.T01 | AT2G29370 | 30.846 | 201 | 134 | 4 | 14 | 211 | 16 | 214 | 1.84e-15 | 75.5 |
| MsG0480020490.01.T01 | AT3G47350 | 28.358 | 201 | 128 | 6 | 16 | 208 | 46 | 238 | 2.09e-15 | 76.3 |
| MsG0480020490.01.T01 | AT2G29290 | 28.358 | 201 | 139 | 3 | 14 | 211 | 7 | 205 | 4.29e-15 | 74.3 |
| MsG0480020490.01.T01 | AT2G29320 | 28.800 | 250 | 162 | 8 | 11 | 251 | 10 | 252 | 4.39e-15 | 74.7 |
| MsG0480020490.01.T01 | AT2G29260 | 27.132 | 258 | 173 | 8 | 2 | 251 | 56 | 306 | 6.19e-15 | 74.7 |
| MsG0480020490.01.T01 | AT2G29350 | 29.949 | 197 | 133 | 3 | 14 | 207 | 15 | 209 | 2.55e-14 | 72.4 |
| MsG0480020490.01.T01 | AT2G29360 | 30.729 | 192 | 128 | 4 | 14 | 202 | 16 | 205 | 1.89e-13 | 69.7 |
| MsG0480020490.01.T01 | AT3G47360 | 29.688 | 192 | 119 | 6 | 17 | 200 | 48 | 231 | 2.54e-13 | 70.1 |
| MsG0480020490.01.T01 | AT2G29320 | 30.542 | 203 | 127 | 6 | 11 | 205 | 10 | 206 | 2.67e-13 | 68.2 |
| MsG0480020490.01.T01 | AT2G29350 | 29.231 | 195 | 133 | 3 | 14 | 205 | 15 | 207 | 8.73e-13 | 67.4 |
| MsG0480020490.01.T01 | AT3G04000 | 27.547 | 265 | 173 | 7 | 1 | 249 | 1 | 262 | 1.00e-12 | 67.8 |
| MsG0480020490.01.T01 | AT2G29310 | 28.054 | 221 | 150 | 6 | 36 | 251 | 27 | 243 | 1.10e-12 | 67.4 |
| MsG0480020490.01.T01 | AT5G04900 | 30.366 | 191 | 125 | 3 | 20 | 202 | 83 | 273 | 1.10e-11 | 65.5 |
Find 78 sgRNAs with CRISPR-Local
Find 205 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTGAAGCTGCTTTGTATT+TGG | 0.166719 | 4:-42393142 | MsG0480020490.01.T01:CDS |
| TGCAACTTGTTTACCTTCTT+AGG | 0.212297 | 4:+42394367 | None:intergenic |
| GCAGCTTCAGCCACATCTTT+TGG | 0.258023 | 4:+42393153 | None:intergenic |
| TGCTTAGAGTGTACGTGGTT+TGG | 0.300551 | 4:+42391047 | None:intergenic |
| GTCAATCACTTCTTGAAATT+CGG | 0.305956 | 4:+42393491 | None:intergenic |
| GCTGAAGCTGCTTTGTATTT+GGG | 0.312530 | 4:-42393141 | MsG0480020490.01.T01:CDS |
| GCTTAGAGTGTACGTGGTTT+GGG | 0.374318 | 4:+42391048 | None:intergenic |
| GATGTCTAGTTTACCGTACT+TGG | 0.377024 | 4:+42393575 | None:intergenic |
| ATTATGCTACCTCGTCGAAC+GGG | 0.382112 | 4:+42393414 | None:intergenic |
| AACTTGGCTGGTGTATTTCT+CGG | 0.386916 | 4:-42393465 | MsG0480020490.01.T01:CDS |
| ACCCATGGCAAGCGTTCCTT+TGG | 0.387041 | 4:-42394400 | MsG0480020490.01.T01:exon |
| CTTGGAAACGGTTGTGTTCA+CGG | 0.391770 | 4:+42393593 | None:intergenic |
| AGGGGTTTATTCTAATCTAA+AGG | 0.394298 | 4:-42393190 | MsG0480020490.01.T01:CDS |
| GGGGTTTATTCTAATCTAAA+GGG | 0.410132 | 4:-42393189 | MsG0480020490.01.T01:CDS |
| AATTGATTTGCAAGGCTTGA+AGG | 0.412288 | 4:-42393810 | MsG0480020490.01.T01:intron |
| ATTAACACAGCTAGTGTTTG+TGG | 0.418206 | 4:-42393393 | MsG0480020490.01.T01:CDS |
| TTCTTTAAGCTTGATGATGA+TGG | 0.418334 | 4:-42393219 | MsG0480020490.01.T01:CDS |
| TTTAACAACGCAGGCATAAC+CGG | 0.433713 | 4:-42393549 | MsG0480020490.01.T01:CDS |
| GCAACTTGTTTACCTTCTTA+GGG | 0.438236 | 4:+42394368 | None:intergenic |
| TGTGTGTCACCTTATGTTGT+TGG | 0.443444 | 4:-42393261 | MsG0480020490.01.T01:CDS |
| GTATGTTAGTGGTCATAATC+TGG | 0.450617 | 4:-42393103 | MsG0480020490.01.T01:intron |
| AGTTCAAAGGACGCAATTGT+TGG | 0.452998 | 4:-42390965 | MsG0480020490.01.T01:CDS |
| CAGAAGATTTGTGTAACTCT+TGG | 0.459167 | 4:+42393664 | None:intergenic |
| GTTCAAAGCACGCCGTTGTC+GGG | 0.459412 | 4:-42393335 | MsG0480020490.01.T01:CDS |
| AACACAACCGTTTCCAAGTA+CGG | 0.463216 | 4:-42393588 | MsG0480020490.01.T01:CDS |
| TGGTTTCTGCTGCCCTAAGA+AGG | 0.468552 | 4:-42394380 | MsG0480020490.01.T01:intron |
| AGTTCAAAGCACGCCGTTGT+CGG | 0.484187 | 4:-42393336 | MsG0480020490.01.T01:CDS |
| GTTCAAAGGACGCAATTGTT+GGG | 0.485443 | 4:-42390964 | MsG0480020490.01.T01:CDS |
| GATGAGTCGAAGTATGTTAG+TGG | 0.487950 | 4:-42393114 | MsG0480020490.01.T01:CDS |
| TCGGAACAAAACACGCTGCT+AGG | 0.488852 | 4:-42393446 | MsG0480020490.01.T01:CDS |
| ACAGGTGGTGCGAGCGGCAT+CGG | 0.490938 | 4:-42393771 | MsG0480020490.01.T01:CDS |
| ATTGATTTGCAAGGCTTGAA+GGG | 0.500137 | 4:-42393809 | MsG0480020490.01.T01:intron |
| AACGGAGTTCCAACAACATA+AGG | 0.500717 | 4:+42393252 | None:intergenic |
| TAGTTTACCGTACTTGGAAA+CGG | 0.502375 | 4:+42393581 | None:intergenic |
| TGTCCATTGTGACGTAAGAA+AGG | 0.504465 | 4:-42393634 | MsG0480020490.01.T01:CDS |
| AGAAGTGATTGACATTAACT+TGG | 0.510820 | 4:-42393481 | MsG0480020490.01.T01:CDS |
| AACCAAAGGAACGCTTGCCA+TGG | 0.523073 | 4:+42394398 | None:intergenic |
| AGAGTGTACGTGGTTTGGGT+TGG | 0.529053 | 4:+42391052 | None:intergenic |
| TTATGTTGTTGGAACTCCGT+TGG | 0.530258 | 4:-42393250 | MsG0480020490.01.T01:CDS |
| CGGAACAAAACACGCTGCTA+GGG | 0.533738 | 4:-42393445 | MsG0480020490.01.T01:CDS |
| ACAATCGAGCTTGGACAGTA+CGG | 0.538137 | 4:-42390926 | MsG0480020490.01.T01:CDS |
| GGGAAAGTAGCTCTGATCAC+AGG | 0.540590 | 4:-42393789 | MsG0480020490.01.T01:CDS |
| TTAAAGAAATTCTTAGCCAA+CGG | 0.547896 | 4:+42393234 | None:intergenic |
| AACGACTTGAGCTCCGTGGT+TGG | 0.548195 | 4:+42393725 | None:intergenic |
| TCTTACGTCACAATGGACAT+AGG | 0.551868 | 4:+42393638 | None:intergenic |
| ATTAACGCAGCTAGTGTTGG+TGG | 0.554442 | 4:-42391022 | MsG0480020490.01.T01:CDS |
| GTGATTGACATTAACTTGGC+TGG | 0.556342 | 4:-42393477 | MsG0480020490.01.T01:CDS |
| AGCTGATATTCAAGATGACA+TGG | 0.557757 | 4:-42393700 | MsG0480020490.01.T01:CDS |
| TGCGTCCTTTGAACTTGTGT+AGG | 0.565260 | 4:+42390973 | None:intergenic |
| ATAATTAACGCAGCTAGTGT+TGG | 0.568649 | 4:-42391025 | MsG0480020490.01.T01:CDS |
| ACCAAAGGAACGCTTGCCAT+GGG | 0.575522 | 4:+42394399 | None:intergenic |
| AATTATGCTACCTCGTCGAA+CGG | 0.577311 | 4:+42393413 | None:intergenic |
| GCCATCGAGCTTGGACCGTA+CGG | 0.580938 | 4:-42393297 | MsG0480020490.01.T01:CDS |
| GCAAGACTCTTCTCCAACCA+CGG | 0.582010 | 4:-42393738 | MsG0480020490.01.T01:CDS |
| CTGATCACAGGTGGTGCGAG+CGG | 0.585318 | 4:-42393777 | MsG0480020490.01.T01:CDS |
| TGGGAATGAGCAAAATGTGT+TGG | 0.587081 | 4:+42390876 | None:intergenic |
| GCTAGTGTTGGTGGATGCAT+AGG | 0.591630 | 4:-42391013 | MsG0480020490.01.T01:CDS |
| AGTGTTGGTGGATGCATAGG+TGG | 0.595612 | 4:-42391010 | MsG0480020490.01.T01:CDS |
| AGTGTTTGTGGATGCATAGG+TGG | 0.595612 | 4:-42393381 | MsG0480020490.01.T01:CDS |
| GACATCATGTTTAACAACGC+AGG | 0.601580 | 4:-42393558 | MsG0480020490.01.T01:CDS |
| TTGTGGATGCATAGGTGGTG+TGG | 0.603697 | 4:-42393376 | MsG0480020490.01.T01:CDS |
| ACATGCCTACACAAGTTCAA+AGG | 0.609154 | 4:-42390978 | MsG0480020490.01.T01:CDS |
| TTTCCTTTCTTACGTCACAA+TGG | 0.611758 | 4:+42393631 | None:intergenic |
| TTATGCTACCTCGTCGAACG+GGG | 0.611852 | 4:+42393415 | None:intergenic |
| GCTAGTGTTTGTGGATGCAT+AGG | 0.616627 | 4:-42393384 | MsG0480020490.01.T01:CDS |
| TAATCTTATGCCAAAAGATG+TGG | 0.618201 | 4:-42393163 | MsG0480020490.01.T01:CDS |
| TGGTGGATGCATAGGTGGTG+TGG | 0.620200 | 4:-42391005 | MsG0480020490.01.T01:CDS |
| GGCGTGCTTTGAACTTGTGT+AGG | 0.622128 | 4:+42393344 | None:intergenic |
| AAAAGTGAAAAGCTCACCCA+TGG | 0.628928 | 4:-42394415 | MsG0480020490.01.T01:exon |
| CAATTCACTCTAATACCGTA+CGG | 0.635264 | 4:+42393282 | None:intergenic |
| ACCGTACGGTCCAAGCTCGA+TGG | 0.637467 | 4:+42393296 | None:intergenic |
| AATTATGCTTAGAGTGTACG+TGG | 0.645225 | 4:+42391042 | None:intergenic |
| CTTAGGGCAGCAGAAACCAA+AGG | 0.669735 | 4:+42394384 | None:intergenic |
| AAAGTAGCTCTGATCACAGG+TGG | 0.672097 | 4:-42393786 | MsG0480020490.01.T01:CDS |
| GTAATGATCCCCGTTCGACG+AGG | 0.673490 | 4:-42393423 | MsG0480020490.01.T01:CDS |
| GTTGGAGAAGAGTCTTGCAG+TGG | 0.680597 | 4:+42393743 | None:intergenic |
| CTATAACGACTTGAGCTCCG+TGG | 0.687548 | 4:+42393721 | None:intergenic |
| GCTGATATTCAAGATGACAT+GGG | 0.689593 | 4:-42393699 | MsG0480020490.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAGAGTTTTTTTTAA+AGG | + | Chr4:42393427-42393446 | None:intergenic | 10.0% |
| !!! | AAATTAATCATATTTGAAAT+AGG | + | Chr4:42391375-42391394 | None:intergenic | 10.0% |
| !!! | ATTCATTCATTTTTTTTTTT+TGG | - | Chr4:42392599-42392618 | MsG0480020490.01.T01:intron | 10.0% |
| !!! | GAATTATTCTAATTTTTTTT+TGG | - | Chr4:42391130-42391149 | MsG0480020490.01.T01:intron | 10.0% |
| !! | AAAACAAAATTGTTATCTAA+AGG | + | Chr4:42392465-42392484 | None:intergenic | 15.0% |
| !! | AAACAAAAGAAAAAAAAGTA+CGG | - | Chr4:42391437-42391456 | MsG0480020490.01.T01:intron | 15.0% |
| !! | AGAGAGTTTATTTAATAATA+TGG | + | Chr4:42393932-42393951 | None:intergenic | 15.0% |
| !! | AGTATTTATATGGATAATTA+GGG | + | Chr4:42393874-42393893 | None:intergenic | 15.0% |
| !! | TAGTATTTATATGGATAATT+AGG | + | Chr4:42393875-42393894 | None:intergenic | 15.0% |
| !!! | AATTTAACTTTGATATAGTT+TGG | - | Chr4:42391015-42391034 | MsG0480020490.01.T01:CDS | 15.0% |
| !!! | ACGAAGATAATATTATTTTA+TGG | + | Chr4:42393331-42393350 | None:intergenic | 15.0% |
| !!! | ATTTAACTTTGATATAGTTT+GGG | - | Chr4:42391016-42391035 | MsG0480020490.01.T01:CDS | 15.0% |
| !!! | TATATTTTTATGTATGATTG+TGG | + | Chr4:42391202-42391221 | None:intergenic | 15.0% |
| !!! | TTTTATCTAATTTTTAAGCT+AGG | + | Chr4:42391049-42391068 | None:intergenic | 15.0% |
| !!! | TTTTTTCTTTTGTTTTTTTG+AGG | + | Chr4:42391432-42391451 | None:intergenic | 15.0% |
| !! | AATACAGAAGAAACTATATA+TGG | + | Chr4:42393572-42393591 | None:intergenic | 20.0% |
| !! | ACAATTAATTTCAGTTACAA+AGG | + | Chr4:42391466-42391485 | None:intergenic | 20.0% |
| !! | TAGTTTCTTCTGTATTTAAA+TGG | - | Chr4:42393576-42393595 | MsG0480020490.01.T01:CDS | 20.0% |
| !! | TTGAATTAAATTTGTGTACA+TGG | - | Chr4:42391071-42391090 | MsG0480020490.01.T01:CDS | 20.0% |
| !!! | AAACAACTTCTATTTTTCTT+AGG | + | Chr4:42391308-42391327 | None:intergenic | 20.0% |
| !!! | GCTTTTAATGTTCAAATATA+TGG | - | Chr4:42392574-42392593 | MsG0480020490.01.T01:intron | 20.0% |
| !!! | TCTAAAATCATAAGTTTGTT+GGG | + | Chr4:42394091-42394110 | None:intergenic | 20.0% |
| !!! | TGTTCAAAAGTTTTTATCTT+TGG | + | Chr4:42391398-42391417 | None:intergenic | 20.0% |
| !!! | TTCTAAAATCATAAGTTTGT+TGG | + | Chr4:42394092-42394111 | None:intergenic | 20.0% |
| !!! | TTTAGAACTGCTATTAATAA+AGG | - | Chr4:42394105-42394124 | MsG0480020490.01.T01:intron | 20.0% |
| ! | AGAACAAAAACAATAAAGTC+TGG | + | Chr4:42393050-42393069 | None:intergenic | 25.0% |
| ! | AGCATTTATGGAAAGAATAA+AGG | + | Chr4:42392848-42392867 | None:intergenic | 25.0% |
| ! | ATAATGTGTTCAATACATGT+TGG | - | Chr4:42392653-42392672 | MsG0480020490.01.T01:intron | 25.0% |
| ! | ATCTTATGAACTCTTATGTT+AGG | + | Chr4:42392766-42392785 | None:intergenic | 25.0% |
| ! | CATATATCTAAGTATACGTA+CGG | + | Chr4:42392313-42392332 | None:intergenic | 25.0% |
| ! | CTAGGTAAAATAATCATTAG+TGG | + | Chr4:42394210-42394229 | None:intergenic | 25.0% |
| ! | GGAGAAAGAAAATAGTTAAA+TGG | + | Chr4:42393406-42393425 | None:intergenic | 25.0% |
| ! | GTTGTGCATTAGTATTTATA+TGG | + | Chr4:42393884-42393903 | None:intergenic | 25.0% |
| ! | TTAAAGAAATTCTTAGCCAA+CGG | + | Chr4:42392088-42392107 | None:intergenic | 25.0% |
| !! | ATTTTTATGTATGATTGTGG+AGG | + | Chr4:42391199-42391218 | None:intergenic | 25.0% |
| !! | TGCCAAATTTTATTCATAGT+GGG | + | Chr4:42392426-42392445 | None:intergenic | 25.0% |
| !! | TTGCCAAATTTTATTCATAG+TGG | + | Chr4:42392427-42392446 | None:intergenic | 25.0% |
| !! | TTGGAATTTTGTAATGAATG+TGG | - | Chr4:42392672-42392691 | MsG0480020490.01.T01:intron | 25.0% |
| !!! | ATATTACTCTGAAGTTTGTT+TGG | + | Chr4:42391106-42391125 | None:intergenic | 25.0% |
| !!! | TAACTTGTTTTCAAGTATGT+TGG | + | Chr4:42391807-42391826 | None:intergenic | 25.0% |
| AAAGTCTCAAACAACTCAAT+GGG | + | Chr4:42393487-42393506 | None:intergenic | 30.0% | |
| AACTTTGATATAGTTTGGGT+TGG | - | Chr4:42391020-42391039 | MsG0480020490.01.T01:CDS | 30.0% | |
| AATATGAATGAATGACCATG+TGG | + | Chr4:42393212-42393231 | None:intergenic | 30.0% | |
| ACCCCACTATGAATAAAATT+TGG | - | Chr4:42392421-42392440 | MsG0480020490.01.T01:intron | 30.0% | |
| AGAAGTGATTGACATTAACT+TGG | - | Chr4:42391838-42391857 | MsG0480020490.01.T01:intron | 30.0% | |
| AGGGGTTTATTCTAATCTAA+AGG | - | Chr4:42392129-42392148 | MsG0480020490.01.T01:intron | 30.0% | |
| AGTAAAATGAGTCTAAGAAG+TGG | + | Chr4:42391230-42391249 | None:intergenic | 30.0% | |
| AGTCTATCAAAATTGGTATC+AGG | + | Chr4:42393546-42393565 | None:intergenic | 30.0% | |
| ATATCATATCTTACTCCACA+TGG | - | Chr4:42393194-42393213 | MsG0480020490.01.T01:CDS | 30.0% | |
| CAAAATCCATGTTTCATAGA+TGG | - | Chr4:42392894-42392913 | MsG0480020490.01.T01:intron | 30.0% | |
| GGGGTTTATTCTAATCTAAA+GGG | - | Chr4:42392130-42392149 | MsG0480020490.01.T01:intron | 30.0% | |
| GTCAATCACTTCTTGAAATT+CGG | + | Chr4:42391831-42391850 | None:intergenic | 30.0% | |
| TAAACCACACATAGTATTCT+AGG | + | Chr4:42394228-42394247 | None:intergenic | 30.0% | |
| TAATCTTATGCCAAAAGATG+TGG | - | Chr4:42392156-42392175 | MsG0480020490.01.T01:intron | 30.0% | |
| TAGAATACTATGTGTGGTTT+AGG | - | Chr4:42394227-42394246 | MsG0480020490.01.T01:intron | 30.0% | |
| TCATAAGATTTGTGCAAAGT+AGG | - | Chr4:42392777-42392796 | MsG0480020490.01.T01:intron | 30.0% | |
| TTTACCTAGAATACTATGTG+TGG | - | Chr4:42394221-42394240 | MsG0480020490.01.T01:intron | 30.0% | |
| ! | GCCAAATTTTATTCATAGTG+GGG | + | Chr4:42392425-42392444 | None:intergenic | 30.0% |
| !! | ATGGACTAGTCTATCAAAAT+TGG | + | Chr4:42393553-42393572 | None:intergenic | 30.0% |
| !! | TTCTTTAAGCTTGATGATGA+TGG | - | Chr4:42392100-42392119 | MsG0480020490.01.T01:intron | 30.0% |
| !!! | AATTAGGGTTTTAGTTGCTA+TGG | + | Chr4:42393859-42393878 | None:intergenic | 30.0% |
| !!! | ATTAGGGTTTTAGTTGCTAT+GGG | + | Chr4:42393858-42393877 | None:intergenic | 30.0% |
| !!! | TATGTTGGTTTTGTTTACAC+CGG | + | Chr4:42391792-42391811 | None:intergenic | 30.0% |
| !!! | TTGATGATGATGGAGTTTTA+GGG | - | Chr4:42392110-42392129 | MsG0480020490.01.T01:intron | 30.0% |
| AATTATGCTTAGAGTGTACG+TGG | + | Chr4:42394280-42394299 | None:intergenic | 35.0% | |
| AGCTGATATTCAAGATGACA+TGG | - | Chr4:42391619-42391638 | MsG0480020490.01.T01:intron | 35.0% | |
| AGTTGCTCATAGTTTAGCTA+AGG | + | Chr4:42392720-42392739 | None:intergenic | 35.0% | |
| ATAATCTGGTCATAGATGGA+GGG | - | Chr4:42392230-42392249 | MsG0480020490.01.T01:intron | 35.0% | |
| ATAATTAACGCAGCTAGTGT+TGG | - | Chr4:42394294-42394313 | MsG0480020490.01.T01:intron | 35.0% | |
| ATATATCTGTGTGTGTGTGT+GGG | + | Chr4:42394178-42394197 | None:intergenic | 35.0% | |
| ATCAAAGATCTGTCGTAAAG+AGG | + | Chr4:42394034-42394053 | None:intergenic | 35.0% | |
| ATTAACACAGCTAGTGTTTG+TGG | - | Chr4:42391926-42391945 | MsG0480020490.01.T01:intron | 35.0% | |
| CAAAGTCTCAAACAACTCAA+TGG | + | Chr4:42393488-42393507 | None:intergenic | 35.0% | |
| CAATTCACTCTAATACCGTA+CGG | + | Chr4:42392040-42392059 | None:intergenic | 35.0% | |
| CACATGAGAGAACTGAAAAT+TGG | - | Chr4:42393081-42393100 | MsG0480020490.01.T01:intron | 35.0% | |
| CACTCGAATTATGTGTTCTT+GGG | - | Chr4:42393629-42393648 | MsG0480020490.01.T01:CDS | 35.0% | |
| CAGAAGATTTGTGTAACTCT+TGG | + | Chr4:42391658-42391677 | None:intergenic | 35.0% | |
| GCGTGTACAAGTATAACTAT+TGG | - | Chr4:42392799-42392818 | MsG0480020490.01.T01:intron | 35.0% | |
| GCTGATATTCAAGATGACAT+GGG | - | Chr4:42391620-42391639 | MsG0480020490.01.T01:intron | 35.0% | |
| GCTGCATCATCATACATAAA+AGG | + | Chr4:42390986-42391005 | None:intergenic | 35.0% | |
| GGCAAAGTCTAACAGTAATT+TGG | + | Chr4:42394070-42394089 | None:intergenic | 35.0% | |
| GTATGTTAGTGGTCATAATC+TGG | - | Chr4:42392216-42392235 | MsG0480020490.01.T01:intron | 35.0% | |
| TAGTTTACCGTACTTGGAAA+CGG | + | Chr4:42391741-42391760 | None:intergenic | 35.0% | |
| TATATATCTGTGTGTGTGTG+TGG | + | Chr4:42394179-42394198 | None:intergenic | 35.0% | |
| TCTCTTAAACTCTCACTGAA+AGG | - | Chr4:42393947-42393966 | MsG0480020490.01.T01:intron | 35.0% | |
| TGACATTTATGCTATTGAGC+TGG | + | Chr4:42393139-42393158 | None:intergenic | 35.0% | |
| TTTCCTTTCTTACGTCACAA+TGG | + | Chr4:42391691-42391710 | None:intergenic | 35.0% | |
| ! | CAATTTTCAGTTCTCTCATG+TGG | + | Chr4:42393083-42393102 | None:intergenic | 35.0% |
| ! | CATTGAGTTGTTTGAGACTT+TGG | - | Chr4:42393486-42393505 | MsG0480020490.01.T01:CDS | 35.0% |
| ! | GCAACTTGTTTACCTTCTTA+GGG | + | Chr4:42390954-42390973 | None:intergenic | 35.0% |
| ! | TACTATGTGTGGTTTAGGTT+TGG | - | Chr4:42394232-42394251 | MsG0480020490.01.T01:intron | 35.0% |
| ! | TCAAAAAAGCACAGTGAGAT+TGG | - | Chr4:42393604-42393623 | MsG0480020490.01.T01:CDS | 35.0% |
| ! | TGCAACTTGTTTACCTTCTT+AGG | + | Chr4:42390955-42390974 | None:intergenic | 35.0% |
| !! | AAGCTCAATGGAATGGATTA+AGG | + | Chr4:42392924-42392943 | None:intergenic | 35.0% |
| !! | AATTGATTTGCAAGGCTTGA+AGG | - | Chr4:42391509-42391528 | MsG0480020490.01.T01:intron | 35.0% |
| !! | ATTGATTTGCAAGGCTTGAA+GGG | - | Chr4:42391510-42391529 | MsG0480020490.01.T01:intron | 35.0% |
| !! | TCATGCTCAATTGATTTGCA+AGG | - | Chr4:42391501-42391520 | MsG0480020490.01.T01:intron | 35.0% |
| !!! | AATCTCACTGTGCTTTTTTG+AGG | + | Chr4:42393605-42393624 | None:intergenic | 35.0% |
| !!! | ATCTCACTGTGCTTTTTTGA+GGG | + | Chr4:42393604-42393623 | None:intergenic | 35.0% |
| !!! | CTTGATGATGATGGAGTTTT+AGG | - | Chr4:42392109-42392128 | MsG0480020490.01.T01:intron | 35.0% |
| !!! | TGATGATGATGGAGTTTTAG+GGG | - | Chr4:42392111-42392130 | MsG0480020490.01.T01:intron | 35.0% |
| AAAAACACGACAATCGAGCT+TGG | - | Chr4:42394384-42394403 | MsG0480020490.01.T01:CDS | 40.0% | |
| AAAAGTGAAAAGCTCACCCA+TGG | - | Chr4:42390904-42390923 | MsG0480020490.01.T01:CDS | 40.0% | |
| AACACAACCGTTTCCAAGTA+CGG | - | Chr4:42391731-42391750 | MsG0480020490.01.T01:intron | 40.0% | |
| AACGGAGTTCCAACAACATA+AGG | + | Chr4:42392070-42392089 | None:intergenic | 40.0% | |
| AACTTGGCTGGTGTATTTCT+CGG | - | Chr4:42391854-42391873 | MsG0480020490.01.T01:intron | 40.0% | |
| AATTATGCTACCTCGTCGAA+CGG | + | Chr4:42391909-42391928 | None:intergenic | 40.0% | |
| ACAGTCGTTGACAGCATTTA+TGG | + | Chr4:42392860-42392879 | None:intergenic | 40.0% | |
| ACAGTTTGGATCACAATCAG+TGG | + | Chr4:42393107-42393126 | None:intergenic | 40.0% | |
| ACATGCCTACACAAGTTCAA+AGG | - | Chr4:42391970-42391989 | MsG0480020490.01.T01:intron | 40.0% | |
| AGTTCAAAGGACGCAATTGT+TGG | - | Chr4:42394354-42394373 | MsG0480020490.01.T01:intron | 40.0% | |
| ATCGAACTTGAGATCTTGAG+AGG | + | Chr4:42393520-42393539 | None:intergenic | 40.0% | |
| CATAATCTGGTCATAGATGG+AGG | - | Chr4:42392229-42392248 | MsG0480020490.01.T01:intron | 40.0% | |
| CCAAGAACACATAATTCGAG+TGG | + | Chr4:42393631-42393650 | None:intergenic | 40.0% | |
| CCACTCGAATTATGTGTTCT+TGG | - | Chr4:42393628-42393647 | MsG0480020490.01.T01:CDS | 40.0% | |
| GACATCATGTTTAACAACGC+AGG | - | Chr4:42391761-42391780 | MsG0480020490.01.T01:intron | 40.0% | |
| GATGAGTCGAAGTATGTTAG+TGG | - | Chr4:42392205-42392224 | MsG0480020490.01.T01:intron | 40.0% | |
| GGATCTCCATCTATGAAACA+TGG | + | Chr4:42392903-42392922 | None:intergenic | 40.0% | |
| GGTCATAATCTGGTCATAGA+TGG | - | Chr4:42392226-42392245 | MsG0480020490.01.T01:intron | 40.0% | |
| GTTCAAAGGACGCAATTGTT+GGG | - | Chr4:42394355-42394374 | MsG0480020490.01.T01:intron | 40.0% | |
| TATATCTGTGTGTGTGTGTG+GGG | + | Chr4:42394177-42394196 | None:intergenic | 40.0% | |
| TCTTACGTCACAATGGACAT+AGG | + | Chr4:42391684-42391703 | None:intergenic | 40.0% | |
| TGAAACAGCAAATGTGCACA+AGG | + | Chr4:42392948-42392967 | None:intergenic | 40.0% | |
| TGCTCATAGTTTAGCTAAGG+CGG | + | Chr4:42392717-42392736 | None:intergenic | 40.0% | |
| TGGGAATGAGCAAAATGTGT+TGG | + | Chr4:42394446-42394465 | None:intergenic | 40.0% | |
| TGTCCATTGTGACGTAAGAA+AGG | - | Chr4:42391685-42391704 | MsG0480020490.01.T01:intron | 40.0% | |
| TGTCGGGCTAATGAAAAACA+CGG | - | Chr4:42392000-42392019 | MsG0480020490.01.T01:intron | 40.0% | |
| TGTGTGTCACCTTATGTTGT+TGG | - | Chr4:42392058-42392077 | MsG0480020490.01.T01:intron | 40.0% | |
| TTATGTTGTTGGAACTCCGT+TGG | - | Chr4:42392069-42392088 | MsG0480020490.01.T01:intron | 40.0% | |
| TTTAACAACGCAGGCATAAC+CGG | - | Chr4:42391770-42391789 | MsG0480020490.01.T01:intron | 40.0% | |
| ! | GATGTCTAGTTTACCGTACT+TGG | + | Chr4:42391747-42391766 | None:intergenic | 40.0% |
| ! | GCTGAAGCTGCTTTGTATTT+GGG | - | Chr4:42392178-42392197 | MsG0480020490.01.T01:intron | 40.0% |
| ! | GTGATTGACATTAACTTGGC+TGG | - | Chr4:42391842-42391861 | MsG0480020490.01.T01:intron | 40.0% |
| ! | GTTTTTCATTAGCCCGACAA+CGG | + | Chr4:42391999-42392018 | None:intergenic | 40.0% |
| ACAAGGCAAGCTCAATGGAA+TGG | + | Chr4:42392931-42392950 | None:intergenic | 45.0% | |
| ACAATCGAGCTTGGACAGTA+CGG | - | Chr4:42394393-42394412 | MsG0480020490.01.T01:CDS | 45.0% | |
| AGTGTTTGTGGATGCATAGG+TGG | - | Chr4:42391938-42391957 | MsG0480020490.01.T01:intron | 45.0% | |
| ATTATGCTACCTCGTCGAAC+GGG | + | Chr4:42391908-42391927 | None:intergenic | 45.0% | |
| CTTGGAAACGGTTGTGTTCA+CGG | + | Chr4:42391729-42391748 | None:intergenic | 45.0% | |
| CTTGTAAGTTGCGTCAAAGC+TGG | - | Chr4:42392397-42392416 | MsG0480020490.01.T01:intron | 45.0% | |
| GCTAGTGTTTGTGGATGCAT+AGG | - | Chr4:42391935-42391954 | MsG0480020490.01.T01:intron | 45.0% | |
| GCTGGAAATTCTGCACAGTT+TGG | + | Chr4:42393121-42393140 | None:intergenic | 45.0% | |
| GCTTAGAGTGTACGTGGTTT+GGG | + | Chr4:42394274-42394293 | None:intergenic | 45.0% | |
| GGGTTCACGGTCGAAAATAA+TGG | - | Chr4:42392250-42392269 | MsG0480020490.01.T01:intron | 45.0% | |
| GTCTATCTATGACCGAGCTA+AGG | + | Chr4:42393004-42393023 | None:intergenic | 45.0% | |
| TATCAAGCAGTGCCTTAGCT+CGG | - | Chr4:42392989-42393008 | MsG0480020490.01.T01:intron | 45.0% | |
| TGCGTCCTTTGAACTTGTGT+AGG | + | Chr4:42394349-42394368 | None:intergenic | 45.0% | |
| TGCTTAGAGTGTACGTGGTT+TGG | + | Chr4:42394275-42394294 | None:intergenic | 45.0% | |
| ! | ATTAACGCAGCTAGTGTTGG+TGG | - | Chr4:42394297-42394316 | MsG0480020490.01.T01:intron | 45.0% |
| ! | GGCTGAAGCTGCTTTGTATT+TGG | - | Chr4:42392177-42392196 | MsG0480020490.01.T01:intron | 45.0% |
| !! | AAAGTAGCTCTGATCACAGG+TGG | - | Chr4:42391533-42391552 | MsG0480020490.01.T01:intron | 45.0% |
| !! | CTAAGGCACTGCTTGATAGT+TGG | + | Chr4:42392987-42393006 | None:intergenic | 45.0% |
| !!! | AATTATTCTAATTTTTTTTT+GGG | - | Chr4:42391131-42391150 | MsG0480020490.01.T01:intron | 5.0% |
| !!! | ATTGTTTTTTTTTTTTTTTA+AGG | - | Chr4:42392348-42392367 | MsG0480020490.01.T01:intron | 5.0% |
| !!! | ATTTTTAAAATTTAAATCTA+TGG | - | Chr4:42392535-42392554 | MsG0480020490.01.T01:intron | 5.0% |
| !!! | GATTTTATTTTATTTTTTAT+TGG | + | Chr4:42393273-42393292 | None:intergenic | 5.0% |
| !!! | TTTTTTTTAAAAAAAAAACT+TGG | + | Chr4:42393662-42393681 | None:intergenic | 5.0% |
| AAAAACACGGCCATCGAGCT+TGG | - | Chr4:42392013-42392032 | MsG0480020490.01.T01:intron | 50.0% | |
| AACCAAAGGAACGCTTGCCA+TGG | + | Chr4:42390924-42390943 | None:intergenic | 50.0% | |
| ACCAAAGGAACGCTTGCCAT+GGG | + | Chr4:42390923-42390942 | None:intergenic | 50.0% | |
| AGTTCAAAGCACGCCGTTGT+CGG | - | Chr4:42391983-42392002 | MsG0480020490.01.T01:intron | 50.0% | |
| CGGAACAAAACACGCTGCTA+GGG | - | Chr4:42391874-42391893 | MsG0480020490.01.T01:intron | 50.0% | |
| CTATAACGACTTGAGCTCCG+TGG | + | Chr4:42391601-42391620 | None:intergenic | 50.0% | |
| CTTAGGGCAGCAGAAACCAA+AGG | + | Chr4:42390938-42390957 | None:intergenic | 50.0% | |
| GCAAGACTCTTCTCCAACCA+CGG | - | Chr4:42391581-42391600 | MsG0480020490.01.T01:intron | 50.0% | |
| GGTCATAGATGGAGGGTTCA+CGG | - | Chr4:42392237-42392256 | MsG0480020490.01.T01:intron | 50.0% | |
| GTTGGAGAAGAGTCTTGCAG+TGG | + | Chr4:42391579-42391598 | None:intergenic | 50.0% | |
| TCGGAACAAAACACGCTGCT+AGG | - | Chr4:42391873-42391892 | MsG0480020490.01.T01:intron | 50.0% | |
| TGCCTCTTGAGCTCAATCGA+GGG | - | Chr4:42393821-42393840 | MsG0480020490.01.T01:intron | 50.0% | |
| TGGTTTCTGCTGCCCTAAGA+AGG | - | Chr4:42390939-42390958 | MsG0480020490.01.T01:CDS | 50.0% | |
| TGTGCACAAGGCAAGCTCAA+TGG | + | Chr4:42392936-42392955 | None:intergenic | 50.0% | |
| TTATGCTACCTCGTCGAACG+GGG | + | Chr4:42391907-42391926 | None:intergenic | 50.0% | |
| TTGTGGATGCATAGGTGGTG+TGG | - | Chr4:42391943-42391962 | MsG0480020490.01.T01:intron | 50.0% | |
| TTTAGCTAAGGCGGCTCTGT+TGG | + | Chr4:42392708-42392727 | None:intergenic | 50.0% | |
| ! | AGAGTGTACGTGGTTTGGGT+TGG | + | Chr4:42394270-42394289 | None:intergenic | 50.0% |
| ! | GCAGCTTCAGCCACATCTTT+TGG | + | Chr4:42392169-42392188 | None:intergenic | 50.0% |
| ! | GGCGTGCTTTGAACTTGTGT+AGG | + | Chr4:42391978-42391997 | None:intergenic | 50.0% |
| ! | TGTGTGTGTGGGGTTTGGTT+TGG | + | Chr4:42394167-42394186 | None:intergenic | 50.0% |
| !! | AGTGTTGGTGGATGCATAGG+TGG | - | Chr4:42394309-42394328 | MsG0480020490.01.T01:intron | 50.0% |
| !! | GCTAGTGTTGGTGGATGCAT+AGG | - | Chr4:42394306-42394325 | MsG0480020490.01.T01:intron | 50.0% |
| !! | GGGAAAGTAGCTCTGATCAC+AGG | - | Chr4:42391530-42391549 | MsG0480020490.01.T01:intron | 50.0% |
| AACGACTTGAGCTCCGTGGT+TGG | + | Chr4:42391597-42391616 | None:intergenic | 55.0% | |
| ACCCATGGCAAGCGTTCCTT+TGG | - | Chr4:42390919-42390938 | MsG0480020490.01.T01:CDS | 55.0% | |
| CTGCCTCTTGAGCTCAATCG+AGG | - | Chr4:42393820-42393839 | MsG0480020490.01.T01:intron | 55.0% | |
| CTGTGTGTGTGTGTGGGGTT+TGG | + | Chr4:42394172-42394191 | None:intergenic | 55.0% | |
| CTTGAGCTCAATCGAGGGGA+GGG | - | Chr4:42393826-42393845 | MsG0480020490.01.T01:intron | 55.0% | |
| GCCTCTTGAGCTCAATCGAG+GGG | - | Chr4:42393822-42393841 | MsG0480020490.01.T01:intron | 55.0% | |
| GTAATGATCCCCGTTCGACG+AGG | - | Chr4:42391896-42391915 | MsG0480020490.01.T01:intron | 55.0% | |
| GTTCAAAGCACGCCGTTGTC+GGG | - | Chr4:42391984-42392003 | MsG0480020490.01.T01:intron | 55.0% | |
| TCCCCTCGATTGAGCTCAAG+AGG | + | Chr4:42393826-42393845 | None:intergenic | 55.0% | |
| TCTTGAGCTCAATCGAGGGG+AGG | - | Chr4:42393825-42393844 | MsG0480020490.01.T01:intron | 55.0% | |
| ! | TGGTGGATGCATAGGTGGTG+TGG | - | Chr4:42394314-42394333 | MsG0480020490.01.T01:intron | 55.0% |
| ACCGTACGGTCCAAGCTCGA+TGG | + | Chr4:42392026-42392045 | None:intergenic | 60.0% | |
| AGCCGCGAGTCTGTCTGCAT+CGG | + | Chr4:42393983-42394002 | None:intergenic | 60.0% | |
| CGAGTCTGTCTGCATCGGAG+GGG | + | Chr4:42393978-42393997 | None:intergenic | 60.0% | |
| CTCCGATGCAGACAGACTCG+CGG | - | Chr4:42393978-42393997 | MsG0480020490.01.T01:intron | 60.0% | |
| CTGATCACAGGTGGTGCGAG+CGG | - | Chr4:42391542-42391561 | MsG0480020490.01.T01:intron | 60.0% | |
| GAGTCTGTCTGCATCGGAGG+GGG | + | Chr4:42393977-42393996 | None:intergenic | 60.0% | |
| GCCATCGAGCTTGGACCGTA+CGG | - | Chr4:42392022-42392041 | MsG0480020490.01.T01:intron | 60.0% | |
| GCGAGTCTGTCTGCATCGGA+GGG | + | Chr4:42393979-42393998 | None:intergenic | 60.0% | |
| ACAGGTGGTGCGAGCGGCAT+CGG | - | Chr4:42391548-42391567 | MsG0480020490.01.T01:intron | 65.0% | |
| CGCGAGTCTGTCTGCATCGG+AGG | + | Chr4:42393980-42393999 | None:intergenic | 65.0% | |
| GACAGACTCGCGGCTGATGG+CGG | - | Chr4:42393988-42394007 | MsG0480020490.01.T01:intron | 65.0% | |
| GCAGACAGACTCGCGGCTGA+TGG | - | Chr4:42393985-42394004 | MsG0480020490.01.T01:intron | 65.0% | |
| !! | AGACTCGCGGCTGATGGCGG+TGG | - | Chr4:42393991-42394010 | MsG0480020490.01.T01:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 42390871 | 42394470 | 42390871 | ID=MsG0480020490.01;Name=MsG0480020490.01 |
| Chr4 | mRNA | 42390871 | 42394470 | 42390871 | ID=MsG0480020490.01.T01;Parent=MsG0480020490.01;Name=MsG0480020490.01.T01;_AED=0.36;_eAED=0.36;_QI=52|0.5|0.33|1|0|0|3|0|324 |
| Chr4 | exon | 42390871 | 42391092 | 42390871 | ID=MsG0480020490.01.T01:exon:15461;Parent=MsG0480020490.01.T01 |
| Chr4 | exon | 42393104 | 42393818 | 42393104 | ID=MsG0480020490.01.T01:exon:15460;Parent=MsG0480020490.01.T01 |
| Chr4 | exon | 42394381 | 42394470 | 42394381 | ID=MsG0480020490.01.T01:exon:15459;Parent=MsG0480020490.01.T01 |
| Chr4 | five_prime_UTR | 42394419 | 42394470 | 42394419 | ID=MsG0480020490.01.T01:five_prime_utr;Parent=MsG0480020490.01.T01 |
| Chr4 | CDS | 42394381 | 42394418 | 42394381 | ID=MsG0480020490.01.T01:cds;Parent=MsG0480020490.01.T01 |
| Chr4 | CDS | 42393104 | 42393818 | 42393104 | ID=MsG0480020490.01.T01:cds;Parent=MsG0480020490.01.T01 |
| Chr4 | CDS | 42390871 | 42391092 | 42390871 | ID=MsG0480020490.01.T01:cds;Parent=MsG0480020490.01.T01 |
| Gene Sequence |
| Protein sequence |
