AlfalfaGEDB | MsG0380014103.01

M. sativa cultivar ZhongmuNo.1 / MsG0380014103.01

KEGG: -
GO: -
PFAM: PF13962

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014103.01.T02	XP_039688427.1	74.157	89	22	1	1	88	115	203	2.34E-36	136
MsG0380014103.01.T01	XP_024634879.1	84.792	480	63	2	1	478	309	780	0	834

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014103.01.T01	A0A396IRE0	92.174	345	27	0	134	478	1	345	0.0	664

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180000241.01	MsG0380014103.01	0.814393	1.576567e-51	1.056641e-48
MsG0180004765.01	MsG0380014103.01	0.812276	4.599661e-51	2.911946e-48
MsG0180005153.01	MsG0380014103.01	0.805902	1.066911e-49	5.712216e-47
MsG0180005524.01	MsG0380014103.01	0.801400	9.164952e-49	4.372590e-46
MsG0180005730.01	MsG0380014103.01	0.815593	8.537152e-52	5.911233e-49
MsG0280010736.01	MsG0380014103.01	0.804052	2.598933e-49	1.326844e-46
MsG0380012067.01	MsG0380014103.01	0.800976	1.119542e-48	5.284826e-46
MsG0380014097.01	MsG0380014103.01	0.878087	3.728562e-69	1.920840e-65
MsG0380014103.01	MsG0380014120.01	0.814137	1.795921e-51	1.195259e-48
MsG0380014103.01	MsG0380014495.01	0.811208	7.852468e-51	4.831421e-48
MsG0380014103.01	MsG0380014948.01	0.808500	3.004097e-50	1.720499e-47
MsG0380014103.01	MsG0380015277.01	0.802222	6.215064e-49	3.027674e-46
MsG0380014103.01	MsG0480018236.01	0.803751	3.002162e-49	1.520848e-46
MsG0380014103.01	MsG0480020490.01	0.800121	1.671796e-48	7.721986e-46
MsG0380014103.01	MsG0480020765.01	0.802395	5.726103e-49	2.801951e-46
MsG0380014103.01	MsG0480020935.01	-0.805514	1.286988e-49	6.821908e-47
MsG0380014103.01	MsG0480021305.01	0.802328	5.911615e-49	2.887831e-46
MsG0380014103.01	MsG0580024790.01	-0.811807	5.820296e-51	3.637959e-48
MsG0380014103.01	MsG0580024952.01	0.805015	1.636730e-49	8.565590e-47
MsG0380014103.01	MsG0580025407.01	-0.827499	1.512373e-54	1.462646e-51
MsG0380014103.01	MsG0580025612.01	0.823260	1.524312e-53	1.305875e-50
MsG0380014103.01	MsG0580025832.01	0.811696	6.152054e-51	3.834015e-48
MsG0380014103.01	MsG0580025834.01	0.809285	2.040937e-50	1.193433e-47
MsG0380014103.01	MsG0580029236.01	0.805887	1.074199e-49	5.749182e-47
MsG0380014103.01	MsG0580030000.01	0.843903	1.052031e-58	1.670434e-55
MsG0380014103.01	MsG0680031264.01	0.802057	6.721210e-49	3.260583e-46
MsG0380014103.01	MsG0780036517.01	0.802124	6.510086e-49	3.163466e-46
MsG0380014103.01	MsG0780036593.01	0.852539	4.320166e-61	9.056292e-58
MsG0380014103.01	MsG0780036595.01	0.818077	2.366493e-52	1.753757e-49
MsG0380014103.01	MsG0780036596.01	0.831017	2.118204e-55	2.270104e-52
MsG0380014103.01	MsG0780036757.01	0.800323	1.521356e-48	7.063339e-46
MsG0380014103.01	MsG0780038378.01	0.800803	1.214361e-48	5.706823e-46
MsG0380014103.01	MsG0780039139.01	0.821664	3.580317e-53	2.931334e-50
MsG0380014103.01	MsG0780039443.01	0.819612	1.059870e-52	8.195383e-50
MsG0380014103.01	MsG0780040888.01	0.819057	1.418547e-52	1.080156e-49
MsG0380014103.01	MsG0780041074.01	0.831877	1.300922e-55	1.430406e-52
MsG0380014103.01	MsG0780041440.01	0.801275	9.721000e-49	4.623470e-46
MsG0380014103.01	MsG0880041864.01	0.812396	4.329015e-51	2.749573e-48
MsG0380014103.01	MsG0880043037.01	0.837108	6.314612e-57	8.119720e-54
MsG0380014103.01	MsG0880043157.01	0.852535	4.331993e-61	9.079274e-58
MsG0380014103.01	MsG0880043521.01	0.806414	8.321616e-50	4.513912e-47
MsG0380014103.01	MsG0880043937.01	0.803044	4.206158e-49	2.092359e-46
MsG0380014103.01	MsG0880045607.01	0.816131	6.478403e-52	4.552024e-49
MsG0280006601.01	MsG0380014103.01	0.824314	8.634453e-54	7.620249e-51
MsG0280007432.01	MsG0380014103.01	0.823611	1.261753e-53	1.091749e-50
MsG0280007955.01	MsG0380014103.01	0.835028	2.128966e-56	2.571490e-53
MsG0280008383.01	MsG0380014103.01	0.801108	1.052092e-48	4.982974e-46
MsG0280010058.01	MsG0380014103.01	0.813435	2.562861e-51	1.673597e-48
MsG0280010517.01	MsG0380014103.01	0.826093	3.278102e-54	3.044068e-51

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014103.01.T01	MTR_3g050500	63.214	473	144	6	6	471	283	732	0.0	565
MsG0380014103.01.T01	MTR_3g051060	70.064	314	93	1	165	478	430	742	2.21e-159	469
MsG0380014103.01.T01	MTR_5g085340	45.395	456	198	6	27	478	344	752	1.33e-111	347
MsG0380014103.01.T01	MTR_3g058570	55.732	314	128	4	167	475	82	389	6.05e-110	331
MsG0380014103.01.T01	MTR_5g085350	56.051	314	132	3	167	478	422	731	2.22e-104	327
MsG0380014103.01.T01	MTR_5g085350	56.051	314	132	3	167	478	435	744	3.47e-104	327
MsG0380014103.01.T01	MTR_5g085360	42.466	365	166	6	145	469	374	734	1.31e-83	273
MsG0380014103.01.T01	MTR_2g020510	45.752	306	158	4	170	474	391	689	1.66e-76	253
MsG0380014103.01.T01	MTR_2g020450	44.272	323	164	4	161	474	376	691	1.89e-69	234
MsG0380014103.01.T01	MTR_2g020470	42.462	325	148	7	161	474	375	671	2.79e-67	228
MsG0380014103.01.T01	MTR_5g091220	36.913	298	173	8	172	465	316	602	9.07e-45	166
MsG0380014103.01.T01	MTR_2g438740	33.333	291	187	4	172	461	279	563	7.72e-44	162
MsG0380014103.01.T01	MTR_3g055310	35.517	290	172	8	170	455	58	336	4.75e-43	155
MsG0380014103.01.T01	MTR_3g055310	35.764	288	170	8	172	455	123	399	1.86e-42	155
MsG0380014103.01.T01	MTR_3g055310	35.517	290	172	8	170	455	173	451	5.78e-42	155
MsG0380014103.01.T01	MTR_3g055310	35.517	290	172	8	170	455	201	479	7.79e-42	155
MsG0380014103.01.T01	MTR_3g055310	35.517	290	172	8	170	455	199	477	8.19e-42	155
MsG0380014103.01.T01	MTR_3g055310	35.764	288	170	8	172	455	228	504	1.49e-41	155
MsG0380014103.01.T01	MTR_2g438440	32.353	306	191	5	172	471	399	694	3.07e-40	154
MsG0380014103.01.T01	MTR_2g438400	32.000	300	186	6	172	465	258	545	3.41e-39	149
MsG0380014103.01.T01	MTR_5g028190	31.208	298	199	3	168	464	239	531	5.66e-39	148
MsG0380014103.01.T01	MTR_2g438700	30.464	302	203	5	172	471	402	698	1.25e-38	149
MsG0380014103.01.T01	MTR_2g438720	30.921	304	199	6	172	471	404	700	9.87e-38	147
MsG0380014103.01.T01	MTR_5g028450	32.166	314	197	7	170	478	2	304	3.66e-37	139
MsG0380014103.01.T01	MTR_5g028130	28.239	301	206	4	168	464	41	335	3.81e-37	139
MsG0380014103.01.T01	MTR_3g455790	32.248	307	193	8	153	455	292	587	1.09e-36	143
MsG0380014103.01.T01	MTR_2g438760	31.164	292	191	6	175	465	280	562	1.30e-35	139
MsG0380014103.01.T01	MTR_2g438640	31.699	306	187	9	172	468	404	696	2.34e-35	140
MsG0380014103.01.T01	MTR_5g028930	30.566	265	181	3	161	425	313	574	4.03e-35	139
MsG0380014103.01.T01	MTR_2g017930	35.075	268	162	6	192	458	382	638	5.33e-35	139
MsG0380014103.01.T01	MTR_2g438640	33.613	238	146	7	236	468	440	670	1.25e-33	134
MsG0380014103.01.T01	MTR_3g452020	31.596	307	195	8	153	455	117	412	1.81e-32	128
MsG0380014103.01.T01	MTR_3g452020	31.596	307	195	8	153	455	293	588	7.01e-32	129
MsG0380014103.01.T01	MTR_2g438640	34.184	196	120	5	277	468	403	593	2.33e-27	115
MsG0380014103.01.T01	MTR_6g017215	35.948	153	97	1	274	425	6	158	2.82e-27	109
MsG0380014103.01.T01	MTR_5g028900	35.417	144	82	2	289	432	17	149	2.07e-21	91.3
MsG0380014103.01.T01	MTR_5g028690	31.928	166	112	1	268	432	35	200	4.99e-21	92.4
MsG0380014103.01.T01	MTR_5g028840	32.240	183	117	4	276	454	4	183	1.62e-18	84.3
MsG0380014103.01.T01	MTR_5g028110	29.442	197	103	5	276	464	4	172	1.40e-17	80.9
MsG0380014103.01.T01	MTR_2g438580	38.750	80	49	0	289	368	3	82	2.73e-15	71.2
MsG0380014103.01.T01	MTR_2g438470	34.711	121	77	1	230	350	380	498	2.75e-15	78.6
MsG0380014103.01.T01	MTR_1g113760	24.510	306	206	8	168	461	239	531	1.28e-13	73.6
MsG0380014103.01.T01	MTR_1g113730	24.437	311	211	9	145	443	17	315	2.66e-12	68.6
MsG0380014103.01.T01	MTR_1g113820	24.779	226	157	5	161	382	268	484	2.67e-12	69.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014103.01.T01	AT3G18670	29.670	364	238	8	114	465	227	584	4.53e-49	177
MsG0380014103.01.T01	AT3G18670	31.024	332	217	6	140	465	314	639	1.03e-48	177
MsG0380014103.01.T01	AT5G35810	31.699	306	198	5	163	462	29	329	2.82e-43	156
MsG0380014103.01.T01	AT5G04690	35.745	235	143	4	235	467	386	614	2.34e-42	159
MsG0380014103.01.T01	AT5G04690	35.745	235	143	4	235	467	406	634	2.96e-42	159
MsG0380014103.01.T01	AT5G04690	35.745	235	143	4	235	467	420	648	3.26e-42	159
MsG0380014103.01.T01	AT5G04700	33.651	315	192	8	160	467	354	658	3.92e-42	159
MsG0380014103.01.T01	AT3G54065	35.211	213	129	3	260	465	8	218	7.07e-38	139
MsG0380014103.01.T01	AT5G04730	30.844	308	192	8	168	467	297	591	6.09e-36	140
MsG0380014103.01.T01	AT5G04680	31.464	321	199	8	160	467	218	530	2.24e-35	138
MsG0380014103.01.T01	AT5G04680	31.153	321	200	7	160	467	327	639	2.30e-35	139
MsG0380014103.01.T01	AT5G04680	31.153	321	200	7	160	467	341	653	4.15e-35	139
MsG0380014103.01.T01	AT5G04680	31.464	321	199	8	160	467	370	682	4.54e-35	139

Find 92 sgRNAs with CRISPR-Local

Find 233 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACTCTATTTGTATCATTATA+AGG	0.224560	3:-49798038	MsG0380014103.01.T01:three_prime_UTR
TGCTTGCCTCTCACATTCTA+TGG	0.260173	3:-49798303	MsG0380014103.01.T01:CDS
AACCCCAGGTGAAATCTTTA+AGG	0.271604	3:-49798751	MsG0380014103.01.T01:CDS
ATGTTCATTTCTTTCATTGC+TGG	0.288747	3:-49798393	MsG0380014103.01.T01:CDS
AAGTGGCGTAGTTGAAATTA+TGG	0.312736	3:-49799605	MsG0380014103.01.T01:CDS
CTTCTTTGTTGCTTCTATGA+TGG	0.336687	3:+49798778	None:intergenic
CCTGTTTCCTGATTGCCTCC+AGG	0.337339	3:+49798612	None:intergenic
GATCAAGATATAACGGAAAC+TGG	0.338760	3:+49798274	None:intergenic
TTCAAGTGCACGCATGATTT+CGG	0.351916	3:+49799453	None:intergenic
CATTGTCAGAGTTAGTTTCA+TGG	0.358694	3:+49799410	None:intergenic
TTTGCTGTATCTTCATTAGT+TGG	0.362700	3:-49798552	MsG0380014103.01.T01:CDS
CCTGGAGGCAATCAGGAAAC+AGG	0.362749	3:-49798612	MsG0380014103.01.T01:CDS
TCCTTTCTATACTCACTTCT+CGG	0.368888	3:-49798497	MsG0380014103.01.T01:CDS
GAATTATATGAAGTTTCTAT+TGG	0.375458	3:-49798007	MsG0380014103.01.T01:three_prime_UTR
AAAACTGCTTGGAGGATATC+TGG	0.377606	3:-49799226	MsG0380014103.01.T01:CDS
CGCAAGTTGTTGAGGGGTTG+TGG	0.380881	3:-49799351	MsG0380014103.01.T01:CDS
AAGAAAGAAATCAAAACAAA+TGG	0.391933	3:-49799725	MsG0380014103.01.T01:CDS
TGTTGCTTCTATGATGGTAA+TGG	0.392154	3:+49798784	None:intergenic
AGCTTAACACCCTTGATACT+TGG	0.393569	3:+49798219	None:intergenic
TTTATTACTTGTAGCAATGA+AGG	0.395604	3:-49799542	MsG0380014103.01.T01:CDS
GTTTATTATGTTTAGAGTAC+TGG	0.399543	3:-49798081	MsG0380014103.01.T01:three_prime_UTR
CTGTTTCCTGATTGCCTCCA+GGG	0.400780	3:+49798613	None:intergenic
TGGATTGAAACTCATGAGTT+TGG	0.409080	3:-49798165	MsG0380014103.01.T01:three_prime_UTR
TCCTCCTTAAAGATTTCACC+TGG	0.410908	3:+49798747	None:intergenic
GTTGTGGAAGAGGCTTTCTA+TGG	0.418288	3:-49799335	MsG0380014103.01.T01:CDS
CAACGTCCCTGGAGGCAATC+AGG	0.419195	3:-49798619	MsG0380014103.01.T01:CDS
GGCGTCTCCTTTGCTACATC+AGG	0.434602	3:-49798642	MsG0380014103.01.T01:CDS
TTGTTGAGGGGTTGTGGAAG+AGG	0.439045	3:-49799345	MsG0380014103.01.T01:CDS
CATATTCGGTAGCCAGCTCT+TGG	0.441519	3:-49801081	MsG0380014103.01.T01:CDS
CTTCTATGATGGTAATGGTC+TGG	0.452731	3:+49798789	None:intergenic
GGGGCTCATCCCTTGGATTA+CGG	0.453441	3:-49801017	MsG0380014103.01.T01:CDS
TCATAAATGCTTCCAAGAGC+TGG	0.458200	3:+49801069	None:intergenic
GTTAAGAAGAAGCACATATT+CGG	0.460043	3:-49801095	MsG0380014103.01.T01:CDS
ACAGGGAAACCAACATTTGA+AGG	0.475667	3:-49798594	MsG0380014103.01.T01:CDS
AACCTTAGGGGCAATGAAGA+TGG	0.479996	3:-49801117	MsG0380014103.01.T01:intron
GAAGGGCAACCAGCATTTGA+AGG	0.483339	3:-49798576	MsG0380014103.01.T01:CDS
ATAGAACAAGATACCACTCT+TGG	0.493665	3:+49798341	None:intergenic
CTCCTTAAAGATTTCACCTG+GGG	0.497170	3:+49798749	None:intergenic
GCTACATCAGGCAACGTCCC+TGG	0.497506	3:-49798630	MsG0380014103.01.T01:CDS
AGAGCTTAATTCAAAAGTAA+AGG	0.498132	3:-49799581	MsG0380014103.01.T01:CDS
GTGTGGTGGGGCTCATCCCT+TGG	0.500121	3:-49801024	MsG0380014103.01.T01:CDS
GAATGTGAGAGGCAAGCAAA+TGG	0.502669	3:+49798308	None:intergenic
GTTGTAGCAGCACTCGTCGC+AGG	0.505518	3:-49798663	MsG0380014103.01.T01:CDS
AGAAAGAAATCAAAACAAAT+GGG	0.508367	3:-49799724	MsG0380014103.01.T01:CDS
GGTGCCACCACCAAGTATCA+AGG	0.511463	3:-49798229	MsG0380014103.01.T01:CDS
TTGAGAAGATCAAGATATAA+CGG	0.512499	3:+49798267	None:intergenic
CCACACATGTATGACTCATA+AGG	0.512671	3:+49801041	None:intergenic
TTGATCTTCTCAAAGTTACA+TGG	0.512948	3:-49798257	MsG0380014103.01.T01:CDS
AGAAATGAACATGGCAACAA+TGG	0.515982	3:+49798404	None:intergenic
ACAGCAAATCCTTCAAATGC+TGG	0.519658	3:+49798567	None:intergenic
TTAACACCCTTGATACTTGG+TGG	0.523933	3:+49798222	None:intergenic
GCTGGTTGCCCTTCAAATGT+TGG	0.529783	3:+49798585	None:intergenic
ATGAGTCATACATGTGTGGT+GGG	0.531314	3:-49801037	MsG0380014103.01.T01:CDS
CACAACCCCTCAACAACTTG+CGG	0.534637	3:+49799352	None:intergenic
TTGAAAGTGTCATGCACGAA+AGG	0.536960	3:-49800956	MsG0380014103.01.T01:CDS
TTGTTGATTTATGCTCTGAA+AGG	0.537416	3:+49799309	None:intergenic
GTCATGTTCTCCGTAATCCA+AGG	0.537829	3:+49801007	None:intergenic
AGACAACCGCAAGTTGTTGA+GGG	0.537910	3:-49799358	MsG0380014103.01.T01:CDS
GTAAAGGCATCTGACAAGAA+AGG	0.540805	3:-49799565	MsG0380014103.01.T01:CDS
CATCATAGAAGCAACAAAGA+AGG	0.547820	3:-49798777	MsG0380014103.01.T01:CDS
TCCGAGAAGTGAGTATAGAA+AGG	0.552792	3:+49798496	None:intergenic
TAGACAACCGCAAGTTGTTG+AGG	0.558579	3:-49799359	MsG0380014103.01.T01:CDS
GATGTCCCACATCATTTGCA+TGG	0.565189	3:+49799198	None:intergenic
CCTCCTTAAAGATTTCACCT+GGG	0.568420	3:+49798748	None:intergenic
TATGAGTCATACATGTGTGG+TGG	0.583051	3:-49801038	MsG0380014103.01.T01:CDS
AAATCAAAACAAATGGGAGA+AGG	0.587759	3:-49799718	MsG0380014103.01.T01:CDS
TATTTGCGTGCAGCAAAACA+TGG	0.589012	3:-49799481	MsG0380014103.01.T01:CDS
GACGTTGCCTGATGTAGCAA+AGG	0.589787	3:+49798635	None:intergenic
ACACCCTTGATACTTGGTGG+TGG	0.591476	3:+49798225	None:intergenic
GTGGGACATCAAGTGGTACA+AGG	0.594742	3:-49799185	MsG0380014103.01.T01:intron
TCAAGGGTGTTAAGCTGTAG+AGG	0.595960	3:-49798212	MsG0380014103.01.T01:exon
ACAGATAAATATTCCAAGAG+TGG	0.603652	3:-49798354	MsG0380014103.01.T01:CDS
CTGGAGGCAATCAGGAAACA+GGG	0.606342	3:-49798611	MsG0380014103.01.T01:CDS
GAATTACCAGCAAAGAAAAG+TGG	0.610189	3:-49799520	MsG0380014103.01.T01:CDS
CAGGGAAACCAACATTTGAA+GGG	0.612015	3:-49798593	MsG0380014103.01.T01:CDS
AGTGTCATGCACGAAAGGAA+AGG	0.614504	3:-49800951	MsG0380014103.01.T01:intron
GTGCGGCCATGCAAATGATG+TGG	0.618816	3:-49799204	MsG0380014103.01.T01:CDS
TCTCAAAGTTACATGGAGGA+AGG	0.625653	3:-49798250	MsG0380014103.01.T01:CDS
GTGCCACCACCAAGTATCAA+GGG	0.630567	3:-49798228	MsG0380014103.01.T01:CDS
TCATGTTCTCCGTAATCCAA+GGG	0.632076	3:+49801008	None:intergenic
TTCTAGATAAAAGCATTGAG+TGG	0.638047	3:-49798713	MsG0380014103.01.T01:CDS
GACAACCGCAAGTTGTTGAG+GGG	0.642150	3:-49799357	MsG0380014103.01.T01:CDS
TGAGTCATACATGTGTGGTG+GGG	0.648242	3:-49801036	MsG0380014103.01.T01:CDS
CCCAGGTGAAATCTTTAAGG+AGG	0.655968	3:-49798748	MsG0380014103.01.T01:CDS
TGCGGCCATGCAAATGATGT+GGG	0.663238	3:-49799203	MsG0380014103.01.T01:CDS
ACAACTCCATAGAATGTGAG+AGG	0.673388	3:+49798297	None:intergenic
ATCTTCTCAAAGTTACATGG+AGG	0.681695	3:-49798254	MsG0380014103.01.T01:CDS
AAATGATGTGGGACATCAAG+TGG	0.684085	3:-49799192	MsG0380014103.01.T01:CDS
TGCTTGGAGGATATCTGGTG+CGG	0.697268	3:-49799221	MsG0380014103.01.T01:CDS
AGCAATGAAAGAAATGAACA+TGG	0.705741	3:+49798395	None:intergenic
ACATCAGGCAACGTCCCTGG+AGG	0.708851	3:-49798627	MsG0380014103.01.T01:CDS
CCTTATGAGTCATACATGTG+TGG	0.718357	3:-49801041	MsG0380014103.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATAAATCATGTAAAATTAA+AGG	+	Chr3:49798256-49798275	None:intergenic	10.0%
!!	ACATATATTAAATATTATCT+GGG	-	Chr3:49798979-49798998	MsG0380014103.01.T01:intron	10.0%
!!	TACATATATTAAATATTATC+TGG	-	Chr3:49798978-49798997	MsG0380014103.01.T01:intron	10.0%
!!!	TAAAAATAGAAGTTTTTTAT+TGG	+	Chr3:49799836-49799855	None:intergenic	10.0%
!!!	TTTTAGATACATTTAAAAAT+TGG	-	Chr3:49798946-49798965	MsG0380014103.01.T01:intron	10.0%
!!	AATGTGATCTATTAATTTAA+TGG	-	Chr3:49798368-49798387	MsG0380014103.01.T01:CDS	15.0%
!!	AGTAAGAACAAAAAAAAAAT+TGG	-	Chr3:49798865-49798884	MsG0380014103.01.T01:intron	15.0%
!!	ATTCTTAAAAAAGAAATGAA+CGG	-	Chr3:49799692-49799711	MsG0380014103.01.T01:CDS	15.0%
!!	TAATTTATCATTTCAACATA+TGG	-	Chr3:49800738-49800757	MsG0380014103.01.T01:intron	15.0%
!!!	AATTTTACATGATTTATTTG+TGG	-	Chr3:49798258-49798277	MsG0380014103.01.T01:CDS	15.0%
!!!	ATAGATTTTTTTTAAGAAGT+AGG	+	Chr3:49800911-49800930	None:intergenic	15.0%
!!!	GATTAATTTCATATTTTTAG+TGG	-	Chr3:49799395-49799414	MsG0380014103.01.T01:CDS	15.0%
!!!	TATTTTCTTATATATAAGAC+CGG	+	Chr3:49798920-49798939	None:intergenic	15.0%
!!!	TGTTTTTAATATAAACCTAA+CGG	+	Chr3:49799155-49799174	None:intergenic	15.0%
!!!	TTTTAAGAATACTCATTTTA+AGG	+	Chr3:49799682-49799701	None:intergenic	15.0%
!!	AAATGTTTGTATTAACCATA+TGG	-	Chr3:49798156-49798175	MsG0380014103.01.T01:three_prime_UTR	20.0%
!!	AAGAAAGAAATCAAAACAAA+TGG	-	Chr3:49800067-49800086	MsG0380014103.01.T01:intron	20.0%
!!	AATACAAAAAACTAAATGGA+AGG	+	Chr3:49800836-49800855	None:intergenic	20.0%
!!	AATTCATCAACATTGTATAA+TGG	+	Chr3:49798062-49798081	None:intergenic	20.0%
!!	ACTCTATTTGTATCATTATA+AGG	-	Chr3:49801754-49801773	MsG0380014103.01.T01:five_prime_UTR	20.0%
!!	AGAAAGAAATCAAAACAAAT+GGG	-	Chr3:49800068-49800087	MsG0380014103.01.T01:intron	20.0%
!!	GAATTATATGAAGTTTCTAT+TGG	-	Chr3:49801785-49801804	MsG0380014103.01.T01:five_prime_UTR	20.0%
!!	TTCTCACTTATTTACTTTAA+AGG	+	Chr3:49798510-49798529	None:intergenic	20.0%
!!!	AGTCTTTTAATATACTATAC+AGG	+	Chr3:49800979-49800998	None:intergenic	20.0%
!!!	CAATGTTGATGAATTAAAAA+AGG	-	Chr3:49798067-49798086	MsG0380014103.01.T01:three_prime_UTR	20.0%
!!!	GAGATCATATGATATTTTTA+AGG	-	Chr3:49800674-49800693	MsG0380014103.01.T01:intron	20.0%
!!!	GTTTACCTATATTTTTTTAG+CGG	-	Chr3:49799037-49799056	MsG0380014103.01.T01:intron	20.0%
!!!	GTTTTTAATATAAACCTAAC+GGG	+	Chr3:49799154-49799173	None:intergenic	20.0%
!!!	TAATTAATTTTGCAACCTTA+GGG	-	Chr3:49798662-49798681	MsG0380014103.01.T01:CDS	20.0%
!!!	TGAAAAAGATATGACATTTT+TGG	-	Chr3:49800154-49800173	MsG0380014103.01.T01:intron	20.0%
!!!	TGTTTTATTATATTGCATTG+TGG	-	Chr3:49801607-49801626	MsG0380014103.01.T01:CDS	20.0%
!!!	TTAATTAATTTTGCAACCTT+AGG	-	Chr3:49798661-49798680	MsG0380014103.01.T01:CDS	20.0%
!!!	TTTACCTATATTTTTTTAGC+GGG	-	Chr3:49799038-49799057	MsG0380014103.01.T01:intron	20.0%
!!!	TTTTTTTTAAAAAACACCGA+CGG	-	Chr3:49799503-49799522	MsG0380014103.01.T01:CDS	20.0%
!	AGAGCTTAATTCAAAAGTAA+AGG	-	Chr3:49800211-49800230	MsG0380014103.01.T01:intron	25.0%
!	AGATTCTCCTTCAAAAAAAA+TGG	-	Chr3:49800112-49800131	MsG0380014103.01.T01:intron	25.0%
!	CTATTTAGACAGATTATTGA+CGG	-	Chr3:49799618-49799637	MsG0380014103.01.T01:CDS	25.0%
!	GTCAATAATCTGTCTAAATA+GGG	+	Chr3:49799619-49799638	None:intergenic	25.0%
!	TATTTAGACAGATTATTGAC+GGG	-	Chr3:49799619-49799638	MsG0380014103.01.T01:CDS	25.0%
!	TCAATATATACTGCAGAAAA+AGG	-	Chr3:49798023-49798042	MsG0380014103.01.T01:three_prime_UTR	25.0%
!	TCGGAATACAAAAAACTAAA+TGG	+	Chr3:49800840-49800859	None:intergenic	25.0%
!	TTGAGAAGATCAAGATATAA+CGG	+	Chr3:49801528-49801547	None:intergenic	25.0%
!	TTTATTACTTGTAGCAATGA+AGG	-	Chr3:49800250-49800269	MsG0380014103.01.T01:intron	25.0%
!	TTTCTGCAGTATATATTGAT+AGG	+	Chr3:49798022-49798041	None:intergenic	25.0%
!!	AATTAATTTTGCAACCTTAG+GGG	-	Chr3:49798663-49798682	MsG0380014103.01.T01:CDS	25.0%
!!	GTTTATTATGTTTAGAGTAC+TGG	-	Chr3:49801711-49801730	MsG0380014103.01.T01:five_prime_UTR	25.0%
!!	TTTTTCTTTGACTCATAGTT+TGG	-	Chr3:49801658-49801677	MsG0380014103.01.T01:five_prime_UTR	25.0%
!!!	AAGAATACTCATTTTAAGGA+TGG	+	Chr3:49799678-49799697	None:intergenic	25.0%
!!!	ATAAAAAAGTGTCATAGCTA+AGG	+	Chr3:49799863-49799882	None:intergenic	25.0%
!!!	CATATGATATTTTTAAGGCA+AGG	-	Chr3:49800679-49800698	MsG0380014103.01.T01:intron	25.0%
!!!	CATTTTAAGGATGGTAAAAA+GGG	+	Chr3:49799669-49799688	None:intergenic	25.0%
!!!	CTGTTTTAACTATATGTGAA+TGG	-	Chr3:49800952-49800971	MsG0380014103.01.T01:CDS	25.0%
!!!	GAATCTTCCATTTTTTTTGA+AGG	+	Chr3:49800122-49800141	None:intergenic	25.0%
!!!	TCATTTTAAGGATGGTAAAA+AGG	+	Chr3:49799670-49799689	None:intergenic	25.0%
!!!	TTAATCAGAGCTTAGTTTTA+TGG	+	Chr3:49800783-49800802	None:intergenic	25.0%
!!!	TTACCTATATTTTTTTAGCG+GGG	-	Chr3:49799039-49799058	MsG0380014103.01.T01:intron	25.0%
!!!	TTTTCTTGGTGATGAAAATA+GGG	+	Chr3:49798186-49798205	None:intergenic	25.0%
!!!	TTTTTCTTGGTGATGAAAAT+AGG	+	Chr3:49798187-49798206	None:intergenic	25.0%
!!!	TTTTTTTAAAAAACACCGAC+GGG	-	Chr3:49799504-49799523	MsG0380014103.01.T01:CDS	25.0%
	AAATCAAAACAAATGGGAGA+AGG	-	Chr3:49800074-49800093	MsG0380014103.01.T01:intron	30.0%
	ACAGATAAATATTCCAAGAG+TGG	-	Chr3:49801438-49801457	MsG0380014103.01.T01:intron	30.0%
	AGCAATGAAAGAAATGAACA+TGG	+	Chr3:49801400-49801419	None:intergenic	30.0%
	ATCATAGTTATGTATTGCAG+AGG	-	Chr3:49800040-49800059	MsG0380014103.01.T01:intron	30.0%
	ATGTTCATTTCTTTCATTGC+TGG	-	Chr3:49801399-49801418	MsG0380014103.01.T01:intron	30.0%
	CGTCAATAATCTGTCTAAAT+AGG	+	Chr3:49799620-49799639	None:intergenic	30.0%
	TTCTTATATATAAGACCGGA+GGG	+	Chr3:49798916-49798935	None:intergenic	30.0%
	TTGATCTTCTCAAAGTTACA+TGG	-	Chr3:49801535-49801554	MsG0380014103.01.T01:intron	30.0%
	TTTCATCACCAAGAAAAAGA+TGG	-	Chr3:49798189-49798208	MsG0380014103.01.T01:three_prime_UTR	30.0%
	TTTCTTATATATAAGACCGG+AGG	+	Chr3:49798917-49798936	None:intergenic	30.0%
!	AACTAAGCTCTGATTAAAAG+TGG	-	Chr3:49800786-49800805	MsG0380014103.01.T01:intron	30.0%
!	GTTAAGAAGAAGCACATATT+CGG	-	Chr3:49798697-49798716	MsG0380014103.01.T01:CDS	30.0%
!	GTTGATGAATTAAAAAAGGC+AGG	-	Chr3:49798071-49798090	MsG0380014103.01.T01:three_prime_UTR	30.0%
!	TTTGCTGTATCTTCATTAGT+TGG	-	Chr3:49801240-49801259	MsG0380014103.01.T01:intron	30.0%
!!	TTCTAGATAAAAGCATTGAG+TGG	-	Chr3:49801079-49801098	MsG0380014103.01.T01:CDS	30.0%
!!	TTGTTGATTTATGCTCTGAA+AGG	+	Chr3:49800486-49800505	None:intergenic	30.0%
!!!	GCTATGACACTTTTTTATAG+AGG	-	Chr3:49799865-49799884	MsG0380014103.01.T01:intron	30.0%
	AAGCCAAAAAGAAGCTTCAT+TGG	+	Chr3:49801351-49801370	None:intergenic	35.0%
	AAGTGGCGTAGTTGAAATTA+TGG	-	Chr3:49800187-49800206	MsG0380014103.01.T01:intron	35.0%
	AGAAATGAACATGGCAACAA+TGG	+	Chr3:49801391-49801410	None:intergenic	35.0%
	ATAGAACAAGATACCACTCT+TGG	+	Chr3:49801454-49801473	None:intergenic	35.0%
	ATCTTCTCAAAGTTACATGG+AGG	-	Chr3:49801538-49801557	MsG0380014103.01.T01:intron	35.0%
	CATCATAGAAGCAACAAAGA+AGG	-	Chr3:49801015-49801034	MsG0380014103.01.T01:CDS	35.0%
	CTAAAAAGTAGGGAAATGAG+GGG	-	Chr3:49799115-49799134	MsG0380014103.01.T01:intron	35.0%
	GAATTACCAGCAAAGAAAAG+TGG	-	Chr3:49800272-49800291	MsG0380014103.01.T01:intron	35.0%
	GATGTAGTATATAGAAGCTG+AGG	+	Chr3:49798547-49798566	None:intergenic	35.0%
	GCTAAAAAGTAGGGAAATGA+GGG	-	Chr3:49799114-49799133	MsG0380014103.01.T01:intron	35.0%
	GGGAGAAGGAAATCAAAAAA+TGG	-	Chr3:49800088-49800107	MsG0380014103.01.T01:intron	35.0%
	TAAAAAGTAGGGAAATGAGG+GGG	-	Chr3:49799116-49799135	MsG0380014103.01.T01:intron	35.0%
	TCCTTTCTATACTCACTTCT+CGG	-	Chr3:49801295-49801314	MsG0380014103.01.T01:intron	35.0%
	TGAAAATAGGGTATGCCATA+TGG	+	Chr3:49798174-49798193	None:intergenic	35.0%
	TGCACAAAGCAAAAAAGCAA+TGG	+	Chr3:49798617-49798636	None:intergenic	35.0%
	TGGATTGAAACTCATGAGTT+TGG	-	Chr3:49801627-49801646	MsG0380014103.01.T01:CDS	35.0%
	TGTTCAATATACATACCCCA+CGG	+	Chr3:49798227-49798246	None:intergenic	35.0%
!	ATTATCTGGGACGACAAAAT+CGG	-	Chr3:49798992-49799011	MsG0380014103.01.T01:intron	35.0%
!	CATTGTCAGAGTTAGTTTCA+TGG	+	Chr3:49800385-49800404	None:intergenic	35.0%
!	CTTCTTTGTTGCTTCTATGA+TGG	+	Chr3:49801017-49801036	None:intergenic	35.0%
!	GATCAAGATATAACGGAAAC+TGG	+	Chr3:49801521-49801540	None:intergenic	35.0%
!	TGAAATTTTGAACCCATTGC+TGG	-	Chr3:49799067-49799086	MsG0380014103.01.T01:intron	35.0%
!	TGAGTAGACCATCTTTTTCT+TGG	+	Chr3:49798200-49798219	None:intergenic	35.0%
!	TGTTGCTTCTATGATGGTAA+TGG	+	Chr3:49801011-49801030	None:intergenic	35.0%
!	TTGCCAATGAAGCTTCTTTT+TGG	-	Chr3:49801345-49801364	MsG0380014103.01.T01:intron	35.0%
!!!	CTATATTTTTTTAGCGGGGT+GGG	-	Chr3:49799043-49799062	MsG0380014103.01.T01:intron	35.0%
!!!	CTCATTTCCCTACTTTTTAG+CGG	+	Chr3:49799115-49799134	None:intergenic	35.0%
!!!	TCATTTCCCTACTTTTTAGC+GGG	+	Chr3:49799114-49799133	None:intergenic	35.0%
!!!	TTTTTGGCTGTAGCAAAAAG+TGG	-	Chr3:49800170-49800189	MsG0380014103.01.T01:intron	35.0%
	AAAACTGCTTGGAGGATATC+TGG	-	Chr3:49800566-49800585	MsG0380014103.01.T01:intron	40.0%
	AAATGATGTGGGACATCAAG+TGG	-	Chr3:49800600-49800619	MsG0380014103.01.T01:intron	40.0%
	AACAAAGAAGGAAAAACCCC+AGG	-	Chr3:49801027-49801046	MsG0380014103.01.T01:CDS	40.0%
	AACCCCAGGTGAAATCTTTA+AGG	-	Chr3:49801041-49801060	MsG0380014103.01.T01:CDS	40.0%
	ACAACGAAAAAACTGCTTGG+AGG	-	Chr3:49800558-49800577	MsG0380014103.01.T01:intron	40.0%
	ACAACTCCATAGAATGTGAG+AGG	+	Chr3:49801498-49801517	None:intergenic	40.0%
	ACAGCAAATCCTTCAAATGC+TGG	+	Chr3:49801228-49801247	None:intergenic	40.0%
	ACAGGGAAACCAACATTTGA+AGG	-	Chr3:49801198-49801217	MsG0380014103.01.T01:intron	40.0%
	AGCTTAACACCCTTGATACT+TGG	+	Chr3:49801576-49801595	None:intergenic	40.0%
	ATGAGTCATACATGTGTGGT+GGG	-	Chr3:49798755-49798774	MsG0380014103.01.T01:CDS	40.0%
	CACACAACGAAAAAACTGCT+TGG	-	Chr3:49800555-49800574	MsG0380014103.01.T01:intron	40.0%
	CAGGGAAACCAACATTTGAA+GGG	-	Chr3:49801199-49801218	MsG0380014103.01.T01:intron	40.0%
	CCACACATGTATGACTCATA+AGG	+	Chr3:49798754-49798773	None:intergenic	40.0%
	CCACCCCGCTAAAAAAATAT+AGG	+	Chr3:49799045-49799064	None:intergenic	40.0%
	CCTCCTTAAAGATTTCACCT+GGG	+	Chr3:49801047-49801066	None:intergenic	40.0%
	CCTTATGAGTCATACATGTG+TGG	-	Chr3:49798751-49798770	MsG0380014103.01.T01:CDS	40.0%
	CGCTAAAAAGTAGGGAAATG+AGG	-	Chr3:49799113-49799132	MsG0380014103.01.T01:intron	40.0%
	CTCCTTAAAGATTTCACCTG+GGG	+	Chr3:49801046-49801065	None:intergenic	40.0%
	GACTTAATAACTACTCCCTC+CGG	-	Chr3:49798898-49798917	MsG0380014103.01.T01:intron	40.0%
	GTCAACTAGATATGTAGGGT+TGG	+	Chr3:49799580-49799599	None:intergenic	40.0%
	GTCAATTGAGCTATGCTCAT+GGG	-	Chr3:49798573-49798592	MsG0380014103.01.T01:CDS	40.0%
	TATGAGTCATACATGTGTGG+TGG	-	Chr3:49798754-49798773	MsG0380014103.01.T01:CDS	40.0%
	TATTTGCGTGCAGCAAAACA+TGG	-	Chr3:49800311-49800330	MsG0380014103.01.T01:intron	40.0%
	TCATAAATGCTTCCAAGAGC+TGG	+	Chr3:49798726-49798745	None:intergenic	40.0%
	TCATGTTCTCCGTAATCCAA+GGG	+	Chr3:49798787-49798806	None:intergenic	40.0%
	TCCGAGAAGTGAGTATAGAA+AGG	+	Chr3:49801299-49801318	None:intergenic	40.0%
	TCCTCCTTAAAGATTTCACC+TGG	+	Chr3:49801048-49801067	None:intergenic	40.0%
	TCTCAAAGTTACATGGAGGA+AGG	-	Chr3:49801542-49801561	MsG0380014103.01.T01:intron	40.0%
	TGTCAATTGAGCTATGCTCA+TGG	-	Chr3:49798572-49798591	MsG0380014103.01.T01:CDS	40.0%
	TTAACACCCTTGATACTTGG+TGG	+	Chr3:49801573-49801592	None:intergenic	40.0%
	TTCAAGTGCACGCATGATTT+CGG	+	Chr3:49800342-49800361	None:intergenic	40.0%
	TTTATGGCAGACCGACAAAT+TGG	+	Chr3:49799538-49799557	None:intergenic	40.0%
!	CGGTGTCAACTAGATATGTA+GGG	+	Chr3:49799584-49799603	None:intergenic	40.0%
!	TCTCACCTTGTCTCGTTTTA+TGG	+	Chr3:49799554-49799573	None:intergenic	40.0%
!	TTTTGAACCCATTGCTGGTA+AGG	-	Chr3:49799072-49799091	MsG0380014103.01.T01:intron	40.0%
!!	CTTCTATGATGGTAATGGTC+TGG	+	Chr3:49801006-49801025	None:intergenic	40.0%
!!	GTAAAGGCATCTGACAAGAA+AGG	-	Chr3:49800227-49800246	MsG0380014103.01.T01:intron	40.0%
!!	TTGAAAGTGTCATGCACGAA+AGG	-	Chr3:49798836-49798855	MsG0380014103.01.T01:intron	40.0%
!!!	CCTATATTTTTTTAGCGGGG+TGG	-	Chr3:49799042-49799061	MsG0380014103.01.T01:intron	40.0%
!!!	TTTGTGCCACTTTTCTTTGC+TGG	+	Chr3:49800281-49800300	None:intergenic	40.0%
	AACCATCTTCATTGCCCCTA+AGG	+	Chr3:49798680-49798699	None:intergenic	45.0%
	AACCTTAGGGGCAATGAAGA+TGG	-	Chr3:49798675-49798694	MsG0380014103.01.T01:CDS	45.0%
	AGACAACCGCAAGTTGTTGA+GGG	-	Chr3:49800434-49800453	MsG0380014103.01.T01:intron	45.0%
	AGTGTCATGCACGAAAGGAA+AGG	-	Chr3:49798841-49798860	MsG0380014103.01.T01:intron	45.0%
	ATCTCCCTTGAGTAACACAG+TGG	+	Chr3:49798288-49798307	None:intergenic	45.0%
	GAATGTGAGAGGCAAGCAAA+TGG	+	Chr3:49801487-49801506	None:intergenic	45.0%
	GATGTCCCACATCATTTGCA+TGG	+	Chr3:49800597-49800616	None:intergenic	45.0%
	GCCTAACCCGCTAAAAAGTA+GGG	-	Chr3:49799105-49799124	MsG0380014103.01.T01:intron	45.0%
	GTCATGTTCTCCGTAATCCA+AGG	+	Chr3:49798788-49798807	None:intergenic	45.0%
	GTCTAAATAGGGCGCATAGT+GGG	+	Chr3:49799608-49799627	None:intergenic	45.0%
	GTCTGCCATAAAACGAGACA+AGG	-	Chr3:49799546-49799565	MsG0380014103.01.T01:CDS	45.0%
	GTTGTGGAAGAGGCTTTCTA+TGG	-	Chr3:49800457-49800476	MsG0380014103.01.T01:intron	45.0%
	GTTGTTGTCATGCACTCAGT+TGG	-	Chr3:49798472-49798491	MsG0380014103.01.T01:CDS	45.0%
	TAGACAACCGCAAGTTGTTG+AGG	-	Chr3:49800433-49800452	MsG0380014103.01.T01:intron	45.0%
	TCTAAATAGGGCGCATAGTG+GGG	+	Chr3:49799607-49799626	None:intergenic	45.0%
	TGAGTCATACATGTGTGGTG+GGG	-	Chr3:49798756-49798775	MsG0380014103.01.T01:CDS	45.0%
	TGCTTGCCTCTCACATTCTA+TGG	-	Chr3:49801489-49801508	MsG0380014103.01.T01:intron	45.0%
	TGTCTAAATAGGGCGCATAG+TGG	+	Chr3:49799609-49799628	None:intergenic	45.0%
!	CCCAGGTGAAATCTTTAAGG+AGG	-	Chr3:49801044-49801063	MsG0380014103.01.T01:CDS	45.0%
!	CCTACCACTGTGTTACTCAA+GGG	-	Chr3:49798281-49798300	MsG0380014103.01.T01:CDS	45.0%
!	GCGGTGTCAACTAGATATGT+AGG	+	Chr3:49799585-49799604	None:intergenic	45.0%
!!	TCAAGGGTGTTAAGCTGTAG+AGG	-	Chr3:49801580-49801599	MsG0380014103.01.T01:intron	45.0%
!!!	TCCCTACTTTTTAGCGGGTT+AGG	+	Chr3:49799109-49799128	None:intergenic	45.0%
!!!	TTTTAGCGGGTTAGGCGTAT+CGG	+	Chr3:49799101-49799120	None:intergenic	45.0%
!!	GTATAAATATATAAATTTAT+AGG	+	Chr3:49799456-49799475	None:intergenic	5.0%
!!!	AAAAAATAAAAATGTTTTTT+CGG	+	Chr3:49800859-49800878	None:intergenic	5.0%
	ATCGGACACCTTACCAGCAA+TGG	+	Chr3:49799083-49799102	None:intergenic	50.0%
	ATGGCAGACCGACAAATTGG+CGG	+	Chr3:49799535-49799554	None:intergenic	50.0%
	ATGGTCTACTCAGTCACCGT+GGG	-	Chr3:49798208-49798227	MsG0380014103.01.T01:exon	50.0%
	ATTATTGACGGGACGAGACC+GGG	-	Chr3:49799630-49799649	MsG0380014103.01.T01:CDS	50.0%
	CAAAATCGGTTGGATCCGTC+AGG	-	Chr3:49799006-49799025	MsG0380014103.01.T01:intron	50.0%
	CACAACCCCTCAACAACTTG+CGG	+	Chr3:49800443-49800462	None:intergenic	50.0%
	CATATTCGGTAGCCAGCTCT+TGG	-	Chr3:49798711-49798730	MsG0380014103.01.T01:CDS	50.0%
	CCCTTGAGTAACACAGTGGT+AGG	+	Chr3:49798284-49798303	None:intergenic	50.0%
	CCTCCGTATAGTGTGTGTGT+GGG	-	Chr3:49799233-49799252	MsG0380014103.01.T01:CDS	50.0%
	CGCCTAACCCGCTAAAAAGT+AGG	-	Chr3:49799104-49799123	MsG0380014103.01.T01:intron	50.0%
	CTCCGTATAGTGTGTGTGTG+GGG	-	Chr3:49799234-49799253	MsG0380014103.01.T01:CDS	50.0%
	CTGGAGGCAATCAGGAAACA+GGG	-	Chr3:49801181-49801200	MsG0380014103.01.T01:intron	50.0%
	CTGTTTCCTGATTGCCTCCA+GGG	+	Chr3:49801182-49801201	None:intergenic	50.0%
	GAAGGGCAACCAGCATTTGA+AGG	-	Chr3:49801216-49801235	MsG0380014103.01.T01:intron	50.0%
	GACAACCGCAAGTTGTTGAG+GGG	-	Chr3:49800435-49800454	MsG0380014103.01.T01:intron	50.0%
	GACGTTGCCTGATGTAGCAA+AGG	+	Chr3:49801160-49801179	None:intergenic	50.0%
	GATTATTGACGGGACGAGAC+CGG	-	Chr3:49799629-49799648	MsG0380014103.01.T01:CDS	50.0%
	GCTGGTTGCCCTTCAAATGT+TGG	+	Chr3:49801210-49801229	None:intergenic	50.0%
	GGGTTAACCCGCCAATTTGT+CGG	-	Chr3:49799524-49799543	MsG0380014103.01.T01:CDS	50.0%
	GGTAAACGAGTCCAACCTGA+CGG	+	Chr3:49799024-49799043	None:intergenic	50.0%
	GTGCCACCACCAAGTATCAA+GGG	-	Chr3:49801564-49801583	MsG0380014103.01.T01:intron	50.0%
	GTGGGACATCAAGTGGTACA+AGG	-	Chr3:49800607-49800626	MsG0380014103.01.T01:intron	50.0%
	TCCGTATAGTGTGTGTGTGG+GGG	-	Chr3:49799235-49799254	MsG0380014103.01.T01:CDS	50.0%
	TCCTCCGTATAGTGTGTGTG+TGG	-	Chr3:49799232-49799251	MsG0380014103.01.T01:CDS	50.0%
	TCGGACACCTTACCAGCAAT+GGG	+	Chr3:49799082-49799101	None:intergenic	50.0%
	TGCGGCCATGCAAATGATGT+GGG	-	Chr3:49800589-49800608	MsG0380014103.01.T01:intron	50.0%
	TGCTTGGAGGATATCTGGTG+CGG	-	Chr3:49800571-49800590	MsG0380014103.01.T01:intron	50.0%
	TTGTTGAGGGGTTGTGGAAG+AGG	-	Chr3:49800447-49800466	MsG0380014103.01.T01:intron	50.0%
!	ACACCCTTGATACTTGGTGG+TGG	+	Chr3:49801570-49801589	None:intergenic	50.0%
!	GCCTACCACTGTGTTACTCA+AGG	-	Chr3:49798280-49798299	MsG0380014103.01.T01:CDS	50.0%
!	TCTGGGACGACAAAATCGGT+TGG	-	Chr3:49798996-49799015	MsG0380014103.01.T01:intron	50.0%
!!	AAATTGGCGGGTTAACCCGT+CGG	+	Chr3:49799522-49799541	None:intergenic	50.0%
	AAGTAGGGAAATGAGGGGGC+AGG	-	Chr3:49799120-49799139	MsG0380014103.01.T01:intron	55.0%
	ATCGGTTGGATCCGTCAGGT+TGG	-	Chr3:49799010-49799029	MsG0380014103.01.T01:intron	55.0%
	CCCACACACACACTATACGG+AGG	+	Chr3:49799236-49799255	None:intergenic	55.0%
	CCCCCCACACACACACTATA+CGG	+	Chr3:49799239-49799258	None:intergenic	55.0%
	CCGTATAGTGTGTGTGTGGG+GGG	-	Chr3:49799236-49799255	MsG0380014103.01.T01:CDS	55.0%
	CCTGGAGGCAATCAGGAAAC+AGG	-	Chr3:49801180-49801199	MsG0380014103.01.T01:intron	55.0%
	CCTGTTTCCTGATTGCCTCC+AGG	+	Chr3:49801183-49801202	None:intergenic	55.0%
	CGCAAGTTGTTGAGGGGTTG+TGG	-	Chr3:49800441-49800460	MsG0380014103.01.T01:intron	55.0%
	CGTATAGTGTGTGTGTGGGG+GGG	-	Chr3:49799237-49799256	MsG0380014103.01.T01:CDS	55.0%
	GATGGTCTACTCAGTCACCG+TGG	-	Chr3:49798207-49798226	MsG0380014103.01.T01:exon	55.0%
	GGCGTCTCCTTTGCTACATC+AGG	-	Chr3:49801150-49801169	MsG0380014103.01.T01:intron	55.0%
	GGGGCTCATCCCTTGGATTA+CGG	-	Chr3:49798775-49798794	MsG0380014103.01.T01:CDS	55.0%
	GTGCGGCCATGCAAATGATG+TGG	-	Chr3:49800588-49800607	MsG0380014103.01.T01:intron	55.0%
	TGGCAGACCGACAAATTGGC+GGG	+	Chr3:49799534-49799553	None:intergenic	55.0%
	TGGTCTACTCAGTCACCGTG+GGG	-	Chr3:49798209-49798228	MsG0380014103.01.T01:exon	55.0%
!	AAATAGGGCGCATAGTGGGG+CGG	+	Chr3:49799604-49799623	None:intergenic	55.0%
!	GGTGCCACCACCAAGTATCA+AGG	-	Chr3:49801563-49801582	MsG0380014103.01.T01:intron	55.0%
	ACATCAGGCAACGTCCCTGG+AGG	-	Chr3:49801165-49801184	MsG0380014103.01.T01:intron	60.0%
	AGGGAAATGAGGGGGCAGGA+GGG	-	Chr3:49799124-49799143	MsG0380014103.01.T01:intron	60.0%
	ATAGTGTGTGTGTGGGGGGG+TGG	-	Chr3:49799240-49799259	MsG0380014103.01.T01:CDS	60.0%
	CAACGTCCCTGGAGGCAATC+AGG	-	Chr3:49801173-49801192	MsG0380014103.01.T01:intron	60.0%
	GCTACATCAGGCAACGTCCC+TGG	-	Chr3:49801162-49801181	MsG0380014103.01.T01:intron	60.0%
	GTTGTAGCAGCACTCGTCGC+AGG	-	Chr3:49801129-49801148	MsG0380014103.01.T01:intron	60.0%
	TAGGGAAATGAGGGGGCAGG+AGG	-	Chr3:49799123-49799142	MsG0380014103.01.T01:intron	60.0%
	TAGTGTGTGTGTGGGGGGGT+GGG	-	Chr3:49799241-49799260	MsG0380014103.01.T01:CDS	60.0%
	AAGGGTCAATCCGCTCCGCC+CGG	+	Chr3:49799651-49799670	None:intergenic	65.0%
	ATTGACGGGACGAGACCGGG+CGG	-	Chr3:49799633-49799652	MsG0380014103.01.T01:CDS	65.0%
	GGCAGGAGGGTTGACCCGTT+AGG	-	Chr3:49799137-49799156	MsG0380014103.01.T01:intron	65.0%
!	GTGTGGTGGGGCTCATCCCT+TGG	-	Chr3:49798768-49798787	MsG0380014103.01.T01:CDS	65.0%
!	CGGGACGAGACCGGGCGGAG+CGG	-	Chr3:49799638-49799657	MsG0380014103.01.T01:CDS	80.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	49798006	49801808	49798006	ID=MsG0380014103.01;Name=MsG0380014103.01
Chr3	mRNA	49798006	49801808	49798006	ID=MsG0380014103.01.T01;Parent=MsG0380014103.01;Name=MsG0380014103.01.T01;_AED=0.46;_eAED=0.46;_QI=152\|1\|1\|1\|0.33\|0.25\|4\|209\|478
Chr3	exon	49798006	49798829	49798006	ID=MsG0380014103.01.T01:exon:9512;Parent=MsG0380014103.01.T01
Chr3	exon	49799186	49799754	49799186	ID=MsG0380014103.01.T01:exon:9511;Parent=MsG0380014103.01.T01
Chr3	exon	49800952	49801131	49800952	ID=MsG0380014103.01.T01:exon:9510;Parent=MsG0380014103.01.T01
Chr3	five_prime_UTR	49801657	49801808	49801657	ID=MsG0380014103.01.T01:five_prime_utr;Parent=MsG0380014103.01.T01
Chr3	CDS	49801584	49801656	49801584	ID=MsG0380014103.01.T01:cds;Parent=MsG0380014103.01.T01
Chr3	CDS	49800952	49801131	49800952	ID=MsG0380014103.01.T01:cds;Parent=MsG0380014103.01.T01
Chr3	CDS	49799186	49799754	49799186	ID=MsG0380014103.01.T01:cds;Parent=MsG0380014103.01.T01
Chr3	CDS	49798215	49798829	49798215	ID=MsG0380014103.01.T01:cds;Parent=MsG0380014103.01.T01
Chr3	three_prime_UTR	49798006	49798214	49798006	ID=MsG0380014103.01.T01:three_prime_utr;Parent=MsG0380014103.01.T01
Chr3	mRNA	49800418	49801808	49800418	ID=MsG0380014103.01.T02;Parent=MsG0380014103.01;Name=MsG0380014103.01.T02;_AED=0.49;_eAED=0.49;_QI=152\|0.5\|0.33\|1\|0\|0\|3\|0\|93
Chr3	exon	49800418	49800443	49800418	ID=MsG0380014103.01.T02:exon:9514;Parent=MsG0380014103.01.T02
Chr3	exon	49800949	49801131	49800949	ID=MsG0380014103.01.T02:exon:9513;Parent=MsG0380014103.01.T02
Chr3	five_prime_UTR	49801657	49801808	49801657	ID=MsG0380014103.01.T02:five_prime_utr;Parent=MsG0380014103.01.T02
Chr3	CDS	49801584	49801656	49801584	ID=MsG0380014103.01.T02:cds;Parent=MsG0380014103.01.T02
Chr3	CDS	49800949	49801131	49800949	ID=MsG0380014103.01.T02:cds;Parent=MsG0380014103.01.T02
Chr3	CDS	49800418	49800443	49800418	ID=MsG0380014103.01.T02:cds;Parent=MsG0380014103.01.T02

Gene Sequence

>MsG0380014103.01.T02

>MsG0380014103.01.T01

ATGTTTGTATTAACCATATGGCATACCCTATTTTCATCACCAAGAAAAAGATGGTCTACTCAGTCACCGTGGGGGGCAATGAAGATGGTTAAGAAGAAGCACATATTCGGTAGCCAGCTCTTGGAAGCATTTATGAAAGATCCTTATGAGTCATACATGTGTGGTGGGGCTCATCCCTTGGATTACGGAGAACATGACGAAAAAATAAAAGAGAAAGATGATAGTTTTGAAAGTGTCATGCACGAAAGGAAAGAGGATTTAAGAAAGAAATCAAAACAAATGGGAGAAGGAAATCAAAAAATGGAAGATTCTCCTTCAAAAAAAATGGAAGATTCAGCAAAAAATGTTGAAAAAGATATGACATTTTTGGCTGTAGCAAAAAGTGGCGTAGTTGAAATTATGGAAGAGCTTAATTCAAAAGTAAAGGCATCTGACAAGAAAGGTTTATTACTTGTAGCAATGAAGGAATTACCAGCAAAGAAAAGTGGCACAAATAATACAGCATATTTGCGTGCAGCAAAACATGGCATAACCGAAATCATGCGTGCACTTGAATCTAAACTAAAAAGTGTCATCCATGAAACTAACTCTGACAATGAAAATGCATTACTTATAGCAGTGAAGTATAGACAACCGCAAGTTGTTGAGGGGTTGTGGAAGAGGCTTTCTATGGAAACCTTTCAGAGCATAAATCAACAAGTTGATATCAATGAAAACACAATTTTACACTTAGCAGCATTTACATCAACACACAACGAAAAAACTGCTTGGAGGATATCTGGTGCGGCCATGCAAATGATGTGGGACATCAAGTGGTACAAGTATATTAAAAGACTTGTACCAGACCATTACCATCATAGAAGCAACAAAGAAGGAAAAACCCCAGGTGAAATCTTTAAGGAGGAACACAAAGAGCTTCTAGATAAAAGCATTGAGTGGTTGAAAGACACATCAGAGTCATGCTCAGTTGTAGCAGCACTCGTCGCAGGCGTCTCCTTTGCTACATCAGGCAACGTCCCTGGAGGCAATCAGGAAACAGGGAAACCAACATTTGAAGGGCAACCAGCATTTGAAGGATTTGCTGTATCTTCATTAGTTGGACTTTACTTCTCTGTCACTGCACTCATCATGTTCCTTTCTATACTCACTTCTCGGAAACAAGTCGAAGACTTCAATAGAAACTTGCCAATGAAGCTTCTTTTTGGCTTAAGTTCTCTCTTCGTAGCCATTGTTGCCATGTTCATTTCTTTCATTGCTGGACATTACTTTGTGCTCACAGATAAATATTCCAAGAGTGGTATCTTGTTCTATTTATATATTTCCATTTGCTTGCCTCTCACATTCTATGGAGTTGTCCAGTTTCCGTTATATCTTGATCTTCTCAAAGTTACATGGAGGAAGGTGCCACCACCAAGTATCAAGGGTGTTAAGCTGTAG

Protein sequence

>MsG0380014103.01.T02

MFVLTIWHTLFSSPRKRWSTQSPWGAMKMVKKKHIFGSQLLEAFMKDPYESYMCGGAHPLDYGEHDEKIKEKDDSFESVMHERKGNDLIYMFE*

>MsG0380014103.01.T01

MFVLTIWHTLFSSPRKRWSTQSPWGAMKMVKKKHIFGSQLLEAFMKDPYESYMCGGAHPLDYGEHDEKIKEKDDSFESVMHERKEDLRKKSKQMGEGNQKMEDSPSKKMEDSAKNVEKDMTFLAVAKSGVVEIMEELNSKVKASDKKGLLLVAMKELPAKKSGTNNTAYLRAAKHGITEIMRALESKLKSVIHETNSDNENALLIAVKYRQPQVVEGLWKRLSMETFQSINQQVDINENTILHLAAFTSTHNEKTAWRISGAAMQMMWDIKWYKYIKRLVPDHYHHRSNKEGKTPGEIFKEEHKELLDKSIEWLKDTSESCSVVAALVAGVSFATSGNVPGGNQETGKPTFEGQPAFEGFAVSSLVGLYFSVTALIMFLSILTSRKQVEDFNRNLPMKLLFGLSSLFVAIVAMFISFIAGHYFVLTDKYSKSGILFYLYISICLPLTFYGVVQFPLYLDLLKVTWRKVPPPSIKGVKL*