AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020825.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020825.01.T01 MTR_4g060460 95.641 803 24 2 1 803 1 792 0.0 1590
MsG0480020825.01.T01 MTR_4g060460 95.019 803 24 2 1 803 1 787 0.0 1578
MsG0480020825.01.T01 MTR_2g093740 70.999 831 192 13 1 803 1 810 0.0 1122
MsG0480020825.01.T01 MTR_2g093740 69.905 844 192 14 1 803 1 823 0.0 1112
MsG0480020825.01.T01 MTR_2g093740 70.390 770 180 12 1 742 1 750 0.0 1023
MsG0480020825.01.T01 MTR_2g093740 69.221 783 180 13 1 742 1 763 0.0 1013
MsG0480020825.01.T01 MTR_2g093740 69.971 696 164 11 133 803 5 680 0.0 954
MsG0480020825.01.T01 MTR_2g093740 68.688 709 164 12 133 803 5 693 0.0 945
MsG0480020825.01.T01 MTR_2g093740 68.458 707 175 12 1 679 1 687 0.0 901
MsG0480020825.01.T01 MTR_2g093740 67.222 720 175 13 1 679 1 700 0.0 892
MsG0480020825.01.T01 MTR_2g093740 69.134 635 152 10 133 742 5 620 0.0 856
MsG0480020825.01.T01 MTR_2g093740 67.747 648 152 11 133 742 5 633 0.0 846
MsG0480020825.01.T01 MTR_2g014770 49.016 508 229 10 46 551 45 524 2.65e-144 441
MsG0480020825.01.T01 MTR_4g088210 49.296 497 217 10 49 538 33 501 8.85e-142 434
MsG0480020825.01.T01 MTR_4g088210 49.296 497 217 10 49 538 33 501 1.63e-141 434
MsG0480020825.01.T01 MTR_2g014770 47.013 519 226 11 46 543 45 535 5.52e-139 424
MsG0480020825.01.T01 MTR_8g100050 38.756 627 345 11 39 663 44 633 1.81e-135 419
MsG0480020825.01.T01 MTR_8g100050 38.694 628 346 11 38 663 43 633 2.34e-134 419
MsG0480020825.01.T01 MTR_8g100050 48.649 111 55 1 669 777 705 815 2.54e-29 125
MsG0480020825.01.T01 MTR_2g005240 50.000 372 171 4 52 422 21 378 6.10e-120 377
MsG0480020825.01.T01 MTR_2g005240 50.769 130 61 2 666 792 539 668 5.93e-31 130
MsG0480020825.01.T01 MTR_8g027440 48.378 370 171 9 52 418 27 379 2.76e-107 344
MsG0480020825.01.T01 MTR_8g027440 56.180 89 38 1 674 762 558 645 7.95e-25 110
MsG0480020825.01.T01 MTR_2g018690 51.482 371 156 9 54 417 23 376 3.22e-107 350
MsG0480020825.01.T01 MTR_2g018690 42.593 108 59 3 656 762 758 863 3.64e-19 93.2
MsG0480020825.01.T01 MTR_5g076270 50.409 367 166 6 54 417 24 377 1.60e-106 346
MsG0480020825.01.T01 MTR_5g076270 44.186 86 46 2 678 762 719 803 2.57e-17 87.4
MsG0480020825.01.T01 MTR_8g079492 50.541 370 160 9 54 417 23 375 3.69e-106 347
MsG0480020825.01.T01 MTR_8g079492 40.741 108 60 3 656 762 765 869 4.53e-18 89.7
MsG0480020825.01.T01 MTR_8g079492 50.541 370 160 9 54 417 23 375 4.00e-106 347
MsG0480020825.01.T01 MTR_8g079492 40.741 108 60 3 656 762 766 870 4.61e-18 89.7
MsG0480020825.01.T01 MTR_3g064050 50.134 373 158 7 54 417 26 379 1.88e-105 343
MsG0480020825.01.T01 MTR_3g064050 46.512 86 44 2 678 762 727 811 1.49e-17 88.2
MsG0480020825.01.T01 MTR_4g021580 46.883 369 176 7 54 418 19 371 1.64e-104 335
MsG0480020825.01.T01 MTR_4g021580 46.429 84 44 1 658 741 539 621 5.87e-16 82.4
MsG0480020825.01.T01 MTR_4g021580 46.883 369 176 7 54 418 19 371 4.00e-104 335
MsG0480020825.01.T01 MTR_4g021580 45.370 108 58 1 658 765 539 645 2.08e-22 103
MsG0480020825.01.T01 MTR_1g024025 51.724 348 151 7 54 398 43 376 1.15e-100 339
MsG0480020825.01.T01 MTR_1g024025 45.055 91 48 2 674 763 754 843 5.08e-18 89.7
MsG0480020825.01.T01 MTR_7g062540 45.283 371 182 9 52 418 12 365 2.04e-99 323
MsG0480020825.01.T01 MTR_7g062540 48.624 109 53 2 657 765 555 660 3.74e-25 112
MsG0480020825.01.T01 MTR_4g124900 50.716 349 152 6 54 398 23 355 3.67e-96 324
MsG0480020825.01.T01 MTR_4g124900 47.423 97 49 2 669 764 965 1060 1.67e-21 100
MsG0480020825.01.T01 MTR_4g124900 50.716 349 152 6 54 398 23 355 3.96e-96 324
MsG0480020825.01.T01 MTR_4g124900 47.423 97 49 2 669 764 988 1083 1.87e-21 100
MsG0480020825.01.T01 MTR_2g043250 50.000 346 159 5 54 398 23 355 6.75e-96 323
MsG0480020825.01.T01 MTR_2g043250 47.423 97 49 2 669 764 981 1076 7.75e-21 99.0
MsG0480020825.01.T01 MTR_8g101360 48.851 348 162 7 54 398 31 365 3.50e-91 310
MsG0480020825.01.T01 MTR_8g101360 47.826 92 46 2 674 764 984 1074 1.49e-21 101
MsG0480020825.01.T01 MTR_8g079492 50.163 307 133 7 115 417 3 293 5.16e-84 285
MsG0480020825.01.T01 MTR_8g079492 40.741 108 60 3 656 762 683 787 4.68e-18 89.7
MsG0480020825.01.T01 MTR_2g094570 41.558 385 171 8 54 401 11 378 4.24e-80 271
MsG0480020825.01.T01 MTR_2g094570 41.558 385 171 8 54 401 11 378 4.66e-80 272
MsG0480020825.01.T01 MTR_2g094570 41.558 385 171 8 54 401 67 434 1.40e-79 272
MsG0480020825.01.T01 MTR_1g064430 37.590 415 203 9 54 428 27 425 2.52e-74 256
MsG0480020825.01.T01 MTR_1g064430 37.590 415 203 9 54 428 40 438 2.68e-74 256
MsG0480020825.01.T01 MTR_1g094960 39.506 405 185 11 54 418 19 403 2.30e-73 251
MsG0480020825.01.T01 MTR_8g446900 40.580 345 177 9 93 434 1 320 7.88e-73 243
MsG0480020825.01.T01 MTR_4g058930 38.200 411 184 7 54 415 12 401 7.20e-71 246
MsG0480020825.01.T01 MTR_4g058930 38.200 411 184 7 54 415 12 401 1.37e-70 246
MsG0480020825.01.T01 MTR_7g101280 34.335 466 212 14 54 452 31 469 6.14e-63 223
MsG0480020825.01.T01 MTR_0041s0110 34.335 466 212 14 54 452 31 469 6.14e-63 223
MsG0480020825.01.T01 MTR_3g073420 35.678 398 206 9 54 418 19 399 5.76e-59 211
MsG0480020825.01.T01 MTR_5g061220 35.115 393 203 11 54 416 19 389 1.86e-56 202
MsG0480020825.01.T01 MTR_7g101275 38.318 321 169 9 63 376 1 299 1.79e-54 194
MsG0480020825.01.T01 MTR_2g024430 33.596 381 211 10 41 412 7 354 1.19e-50 186
MsG0480020825.01.T01 MTR_5g082140 34.699 366 211 9 54 415 12 353 4.54e-50 183
MsG0480020825.01.T01 MTR_5g040880 33.333 372 212 9 54 419 11 352 3.38e-49 182
MsG0480020825.01.T01 MTR_1g058210 31.117 376 218 10 54 416 12 359 1.43e-46 173
MsG0480020825.01.T01 MTR_5g040740 34.699 366 194 15 54 411 12 340 6.51e-46 170
MsG0480020825.01.T01 MTR_0041s0120 34.513 339 169 10 63 376 1 311 3.29e-45 168
MsG0480020825.01.T01 MTR_2g006270 30.628 382 228 10 54 422 13 370 9.80e-38 147
MsG0480020825.01.T01 MTR_2g006380 30.513 390 221 17 49 422 15 370 1.05e-37 147
MsG0480020825.01.T01 MTR_5g060630 28.718 390 240 13 54 419 12 387 3.76e-36 144
MsG0480020825.01.T01 MTR_5g460740 28.718 390 240 13 54 419 12 387 3.76e-36 144
MsG0480020825.01.T01 MTR_5g062970 34.328 201 120 2 54 254 38 226 2.53e-31 123
MsG0480020825.01.T01 MTR_5g060780 28.455 369 234 12 54 416 12 356 6.08e-29 120
MsG0480020825.01.T01 MTR_5g460920 28.455 369 234 12 54 416 12 356 6.19e-29 120
MsG0480020825.01.T01 MTR_5g061890 28.455 369 234 12 54 416 12 356 1.55e-27 116
MsG0480020825.01.T01 MTR_3g064050 41.958 143 81 2 276 417 1 142 6.68e-24 107
MsG0480020825.01.T01 MTR_3g064050 46.512 86 44 2 678 762 490 574 1.11e-17 87.8
MsG0480020825.01.T01 MTR_5g074840 43.810 105 53 2 228 328 58 160 1.72e-18 84.0
MsG0480020825.01.T01 MTR_5g032260 35.714 126 75 3 273 397 34 154 6.46e-15 78.2
MsG0480020825.01.T01 MTR_8g023990 37.963 108 66 1 159 266 165 271 3.04e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020825.01.T01 AT5G60450 59.610 770 257 15 48 803 35 764 0.0 833
MsG0480020825.01.T01 AT5G60450 59.661 766 255 15 52 803 63 788 0.0 830
MsG0480020825.01.T01 AT2G33860 49.206 504 180 13 53 545 53 491 4.22e-139 424
MsG0480020825.01.T01 AT5G62000 50.518 386 159 5 52 427 59 422 2.84e-128 404
MsG0480020825.01.T01 AT5G62000 52.830 106 50 0 663 768 722 827 2.61e-29 125
MsG0480020825.01.T01 AT5G62000 50.518 386 159 5 52 427 59 422 2.84e-128 404
MsG0480020825.01.T01 AT5G62000 52.830 106 50 0 663 768 722 827 2.61e-29 125
MsG0480020825.01.T01 AT5G62000 50.518 386 159 5 52 427 59 422 2.84e-128 404
MsG0480020825.01.T01 AT5G62000 52.830 106 50 0 663 768 722 827 2.61e-29 125
MsG0480020825.01.T01 AT5G62000 50.518 386 159 5 52 427 59 422 2.84e-128 404
MsG0480020825.01.T01 AT5G62000 52.830 106 50 0 663 768 722 827 2.61e-29 125
MsG0480020825.01.T01 AT5G62000 50.518 386 159 5 52 427 59 422 6.01e-128 403
MsG0480020825.01.T01 AT5G62000 49.565 115 58 0 663 777 722 836 2.65e-29 125
MsG0480020825.01.T01 AT1G59750 48.148 378 171 6 54 420 22 385 1.66e-114 362
MsG0480020825.01.T01 AT1G59750 57.143 98 42 0 666 763 529 626 2.03e-29 125
MsG0480020825.01.T01 AT1G59750 48.148 378 171 6 54 420 22 385 1.95e-114 362
MsG0480020825.01.T01 AT1G59750 57.143 98 42 0 666 763 531 628 2.03e-29 125
MsG0480020825.01.T01 AT1G59750 48.148 378 171 6 54 420 22 385 2.87e-114 362
MsG0480020825.01.T01 AT1G59750 57.143 98 42 0 666 763 534 631 2.06e-29 125
MsG0480020825.01.T01 AT1G59750 48.148 378 171 6 54 420 22 385 2.87e-114 362
MsG0480020825.01.T01 AT1G59750 57.143 98 42 0 666 763 534 631 2.06e-29 125
MsG0480020825.01.T01 AT3G61830 47.684 367 159 7 41 398 12 354 3.15e-108 344
MsG0480020825.01.T01 AT3G61830 46.226 106 56 1 658 763 473 577 1.11e-23 107
MsG0480020825.01.T01 AT5G37020 51.087 368 162 7 54 417 22 375 3.68e-108 349
MsG0480020825.01.T01 AT5G37020 50.725 69 32 2 674 741 705 772 7.88e-15 79.3
MsG0480020825.01.T01 AT5G37020 51.087 368 162 7 54 417 22 375 8.45e-108 349
MsG0480020825.01.T01 AT5G37020 46.667 90 46 2 674 762 705 793 1.77e-18 90.9
MsG0480020825.01.T01 AT1G30330 44.444 468 217 12 54 493 23 475 2.08e-106 348
MsG0480020825.01.T01 AT1G30330 43.564 101 53 3 665 762 783 882 9.50e-19 92.0
MsG0480020825.01.T01 AT1G30330 44.444 468 217 12 54 493 25 477 2.63e-106 348
MsG0480020825.01.T01 AT1G30330 43.564 101 53 3 665 762 785 884 9.85e-19 92.0
MsG0480020825.01.T01 AT1G30330 44.444 468 217 12 54 493 25 477 2.63e-106 348
MsG0480020825.01.T01 AT1G30330 43.564 101 53 3 665 762 785 884 9.85e-19 92.0
MsG0480020825.01.T01 AT2G46530 46.667 360 159 7 52 402 19 354 4.08e-105 336
MsG0480020825.01.T01 AT2G46530 40.136 147 54 2 649 762 432 577 8.14e-26 113
MsG0480020825.01.T01 AT2G46530 46.667 360 159 7 52 402 40 375 6.65e-105 336
MsG0480020825.01.T01 AT2G46530 40.136 147 54 2 649 762 453 598 9.85e-26 113
MsG0480020825.01.T01 AT2G33860 49.223 386 139 9 165 545 1 334 8.94e-104 327
MsG0480020825.01.T01 AT4G23980 46.530 389 182 10 52 434 10 378 2.98e-102 329
MsG0480020825.01.T01 AT4G23980 52.294 109 50 2 658 765 506 613 1.37e-27 119
MsG0480020825.01.T01 AT4G23980 46.494 385 179 10 52 427 10 376 5.09e-102 329
MsG0480020825.01.T01 AT4G23980 52.294 109 50 2 658 765 504 611 1.55e-27 119
MsG0480020825.01.T01 AT1G19850 49.587 363 160 10 41 398 33 377 1.77e-100 332
MsG0480020825.01.T01 AT1G19850 43.434 99 54 2 666 763 774 871 8.01e-18 89.0
MsG0480020825.01.T01 AT1G19850 49.587 363 160 10 41 398 44 388 2.71e-100 331
MsG0480020825.01.T01 AT1G19850 43.434 99 54 2 666 763 785 882 8.73e-18 89.0
MsG0480020825.01.T01 AT1G19220 50.867 346 156 5 54 398 23 355 4.44e-97 326
MsG0480020825.01.T01 AT1G19220 48.454 97 48 2 669 764 953 1048 7.10e-22 102
MsG0480020825.01.T01 AT5G20730 50.000 346 159 5 54 398 24 356 5.84e-94 319
MsG0480020825.01.T01 AT5G20730 46.392 97 50 2 669 764 1032 1127 1.01e-20 98.6
MsG0480020825.01.T01 AT3G61830 49.038 312 128 6 94 398 16 303 6.63e-94 305
MsG0480020825.01.T01 AT3G61830 46.226 106 56 1 658 763 422 526 7.62e-24 107
MsG0480020825.01.T01 AT5G20730 49.856 347 159 6 54 398 24 357 2.03e-92 314
MsG0480020825.01.T01 AT5G20730 46.392 97 50 2 669 764 1033 1128 8.63e-21 99.0
MsG0480020825.01.T01 AT5G20730 49.856 347 159 6 54 398 24 357 3.34e-92 314
MsG0480020825.01.T01 AT5G20730 46.392 97 50 2 669 764 1033 1128 1.04e-20 98.6
MsG0480020825.01.T01 AT1G35540 40.260 385 206 9 49 430 22 385 1.25e-85 284
MsG0480020825.01.T01 AT1G35540 51.546 97 46 1 666 762 502 597 1.28e-24 109
MsG0480020825.01.T01 AT1G34310 41.129 372 194 9 49 418 22 370 2.90e-84 280
MsG0480020825.01.T01 AT1G34310 52.747 91 42 1 666 756 503 592 1.23e-22 103
MsG0480020825.01.T01 AT1G34170 39.946 368 197 8 52 416 23 369 1.01e-82 273
MsG0480020825.01.T01 AT1G35240 41.880 351 183 7 49 398 22 352 2.74e-82 275
MsG0480020825.01.T01 AT1G35240 53.684 95 43 1 666 760 489 582 9.87e-24 107
MsG0480020825.01.T01 AT1G34410 40.160 376 192 9 49 422 22 366 4.34e-82 275
MsG0480020825.01.T01 AT1G34410 32.222 270 130 9 506 760 365 596 7.05e-25 110
MsG0480020825.01.T01 AT5G37020 53.232 263 119 3 156 417 21 280 1.41e-81 276
MsG0480020825.01.T01 AT5G37020 46.667 90 46 2 674 762 610 698 1.29e-18 91.3
MsG0480020825.01.T01 AT1G35520 40.591 372 196 9 49 418 22 370 3.10e-80 270
MsG0480020825.01.T01 AT1G35520 49.451 91 45 1 666 756 503 592 6.42e-22 101
MsG0480020825.01.T01 AT2G28350 39.140 442 200 11 54 443 10 434 2.49e-79 269
MsG0480020825.01.T01 AT2G28350 39.140 442 200 11 54 443 10 434 3.71e-79 269
MsG0480020825.01.T01 AT1G34390 38.903 401 213 11 49 443 22 396 6.89e-78 263
MsG0480020825.01.T01 AT1G34390 31.950 241 115 7 530 756 385 590 2.14e-21 99.8
MsG0480020825.01.T01 AT2G46530 50.617 243 114 4 160 402 31 267 1.40e-77 260
MsG0480020825.01.T01 AT2G46530 40.136 147 54 2 649 762 345 490 3.80e-26 114
MsG0480020825.01.T01 AT4G30080 40.299 402 187 10 54 418 19 404 3.14e-77 263
MsG0480020825.01.T01 AT1G34170 37.500 368 180 8 52 416 23 343 6.85e-71 241
MsG0480020825.01.T01 AT1G34170 37.500 368 180 8 52 416 23 343 6.11e-70 240
MsG0480020825.01.T01 AT1G34170 41.667 108 55 2 662 762 414 520 4.09e-20 95.5
MsG0480020825.01.T01 AT1G77850 31.920 401 219 9 55 420 20 401 4.45e-54 197
MsG0480020825.01.T01 AT1G77850 31.920 401 219 9 55 420 20 401 4.47e-54 197
MsG0480020825.01.T01 AT1G43950 42.534 221 105 7 49 267 22 222 1.43e-46 166
MsG0480020825.01.T01 AT2G46870 36.585 123 76 2 152 273 21 142 7.86e-13 70.9
MsG0480020825.01.T01 AT1G13260 35.088 114 72 1 154 265 174 287 7.89e-12 68.2
MsG0480020825.01.T01 AT1G01030 36.735 98 61 1 164 261 54 150 2.51e-11 66.2
MsG0480020825.01.T01 AT1G01030 36.735 98 61 1 164 261 54 150 3.23e-11 66.2
MsG0480020825.01.T01 AT2G36080 33.962 106 68 1 165 268 37 142 3.84e-11 63.2
MsG0480020825.01.T01 AT2G36080 33.962 106 68 1 165 268 37 142 3.84e-11 63.2
MsG0480020825.01.T01 AT2G36080 33.962 106 68 1 165 268 37 142 4.50e-11 64.3
MsG0480020825.01.T01 AT2G36080 33.962 106 68 1 165 268 37 142 4.69e-11 64.3

Find 227 sgRNAs with CRISPR-Local

Find 413 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTTAATTGTCAATCTTTC+TGG 0.134143 4:-49209288 None:intergenic
TTTCAGTTATGCAGGCTTTA+TGG 0.176843 4:+49207716 MsG0480020825.01.T01:CDS
CATCTTCTCCACTTCTTCTT+TGG 0.185315 4:-49209017 None:intergenic
TTGCCGTGTTCTGTAAATTT+TGG 0.187263 4:-49208160 None:intergenic
CTTCTTCTTTGGTATATATA+TGG 0.187674 4:-49209006 None:intergenic
TGCAACAGATGAAAGGAAAT+TGG 0.198707 4:-49206356 None:intergenic
TAGTTAGAGTCTAAAGTTTC+AGG 0.206625 4:+49209152 MsG0480020825.01.T01:exon
GGTATCTCCAATTGTTTAAA+AGG 0.223290 4:-49203728 None:intergenic
AACCAAAAGAATCTTGTTTC+TGG 0.233692 4:+49205772 MsG0480020825.01.T01:CDS
GTTTCTGCTTCTGCTTCATT+AGG 0.240616 4:+49208041 MsG0480020825.01.T01:CDS
TATAATTTGATGTTGCATTT+TGG 0.250991 4:+49209216 MsG0480020825.01.T01:three_prime_UTR
TGTAAACTGAAATCCCTTTC+AGG 0.261732 4:+49207780 MsG0480020825.01.T01:CDS
TTTATGAATGTGTTTGGTTT+GGG 0.263235 4:+49209440 MsG0480020825.01.T01:three_prime_UTR
TTACATTACCTCTATAAATA+TGG 0.265982 4:-49205627 None:intergenic
CACATTATCACTCATGAAAT+TGG 0.273412 4:-49207919 None:intergenic
TGCCTTAAGGAATGTGAAAA+AGG 0.274468 4:+49203515 MsG0480020825.01.T01:CDS
TCCTGCAGCTTATGCTCATC+TGG 0.276011 4:-49208014 None:intergenic
TCCGCGGTTGCTTCAGTCTT+GGG 0.278616 4:-49207168 None:intergenic
CTTCTTCTTATCTTGAACTA+TGG 0.284809 4:+49203609 MsG0480020825.01.T01:CDS
TGACTTTGTAGGGGTGAAAA+TGG 0.293444 4:+49206250 MsG0480020825.01.T01:intron
CACCAGAAACAAGATTCTTT+TGG 0.294480 4:-49205774 None:intergenic
GTACCTACAAATGGAGATAA+TGG 0.308535 4:+49203145 MsG0480020825.01.T01:five_prime_UTR
ACACAATTCTCAAGAGATAT+TGG 0.310800 4:-49209357 None:intergenic
TTTCTGCTTCTGCTTCATTA+GGG 0.316596 4:+49208042 MsG0480020825.01.T01:CDS
GATTCAGGAAGACCATTTCT+AGG 0.323113 4:-49206307 None:intergenic
AGTGAACTGGAGAAACTATT+TGG 0.334062 4:+49208366 MsG0480020825.01.T01:CDS
GTTGATTGGAATAAATGATT+TGG 0.346668 4:+49206785 MsG0480020825.01.T01:CDS
TTTGAAGGTTCAATAATAAC+TGG 0.349549 4:-49209091 None:intergenic
GAAGTGGAGAAGATGACATT+TGG 0.355497 4:+49209025 MsG0480020825.01.T01:CDS
AAGTGGAGAAGATGACATTT+GGG 0.357385 4:+49209026 MsG0480020825.01.T01:CDS
GCAAATTCCTGCAAACTATT+CGG 0.358986 4:+49208110 MsG0480020825.01.T01:CDS
TGATTACCGACAATTGATTC+AGG 0.359324 4:-49206322 None:intergenic
AACCTCATCATTCTCCTTGT+TGG 0.359424 4:-49204070 None:intergenic
GCTGAGCTAACTAGCTCAAA+AGG 0.362860 4:-49209246 None:intergenic
ATAGATGGCCTAAATCAAAA+TGG 0.363531 4:+49206814 MsG0480020825.01.T01:CDS
AGAAACAAAGACAGTGTTCA+TGG 0.366292 4:+49203445 MsG0480020825.01.T01:exon
TGATTTCAACATCGGAGCTT+GGG 0.367716 4:+49207809 MsG0480020825.01.T01:CDS
ACCACAGCATTTCCTTTCTT+AGG 0.369129 4:-49203662 None:intergenic
AGAAAAGAAGTTGGAAGATC+TGG 0.374337 4:+49207978 MsG0480020825.01.T01:CDS
CTCCACACCATGCAGGTCTT+TGG 0.378354 4:-49205593 None:intergenic
GAAAACATGAAACATGCTTT+TGG 0.379376 4:-49206392 None:intergenic
GTCCGCGGTTGCTTCAGTCT+TGG 0.381575 4:-49207169 None:intergenic
ATTTACAGAACACGGCAAAA+AGG 0.386474 4:+49208165 MsG0480020825.01.T01:CDS
CATCAAAACCTGGCATCAAC+TGG 0.390598 4:+49207648 MsG0480020825.01.T01:CDS
ATCAAAATGGAGGTGCTTGA+TGG 0.392147 4:+49206827 MsG0480020825.01.T01:CDS
ATTCCATTATCTCCATTTGT+AGG 0.392289 4:-49203148 None:intergenic
TCTTGACCTTGCAAGACCTT+TGG 0.393008 4:-49207543 None:intergenic
AAAGAAGTTGAGGAATTAGA+AGG 0.393061 4:+49204879 MsG0480020825.01.T01:CDS
TGGGGAAGATTGAATGCTTA+GGG 0.394519 4:-49207149 None:intergenic
CTTCTTAGAGATTCTGATAA+GGG 0.397025 4:+49208399 MsG0480020825.01.T01:CDS
TCAAGAATCCAGTGAGTATA+GGG 0.398915 4:+49206614 MsG0480020825.01.T01:CDS
TCAGTTGGCAGGGATGCATA+TGG 0.400937 4:+49204851 MsG0480020825.01.T01:intron
GTGATGCAGTGCTCTTTCTA+AGG 0.401447 4:+49205794 MsG0480020825.01.T01:CDS
GAAGAATGCATTGTGCCTTA+AGG 0.402456 4:+49203502 MsG0480020825.01.T01:CDS
CACAAGCAAGGAAGCTTAGT+TGG 0.408419 4:+49208297 MsG0480020825.01.T01:CDS
CTATTCGGCTTTCCTTTGTC+TGG 0.408734 4:+49208125 MsG0480020825.01.T01:CDS
GTTCAAAATGAGAATTGAAA+TGG 0.409109 4:+49206642 MsG0480020825.01.T01:CDS
TGAAAATGGAGAGCTGAGAT+TGG 0.413215 4:+49206264 MsG0480020825.01.T01:CDS
GCAACAGATGAAAGGAAATT+GGG 0.413332 4:-49206355 None:intergenic
TTTGATTTAGGCCATCTATA+GGG 0.413502 4:-49206810 None:intergenic
CCAACTGAGGAAGACTTTGA+AGG 0.413561 4:-49209106 None:intergenic
ACTATCGATGGCGTGTTAAA+CGG 0.418788 4:-49207942 None:intergenic
GGAGATGATGAGGGAGATGG+AGG 0.422354 4:+49204900 MsG0480020825.01.T01:CDS
GTTAATCCTTTCAGTTATGC+AGG 0.425087 4:+49207708 MsG0480020825.01.T01:CDS
AAGCATACCATCTCACCATT+AGG 0.429469 4:-49207238 None:intergenic
ACTACTGTTGGAGAATAATC+TGG 0.435153 4:-49209133 None:intergenic
AGCAGGAATCAGTGGAATGA+TGG 0.437544 4:+49207497 MsG0480020825.01.T01:intron
TTCCTATTCCAGTTGATGCC+AGG 0.437834 4:-49207656 None:intergenic
CTGATTTCAACATCGGAGCT+TGG 0.438282 4:+49207808 MsG0480020825.01.T01:CDS
CAGTGGAATGATGGGCTTTG+AGG 0.440411 4:+49207506 MsG0480020825.01.T01:CDS
GAAGGAGATGATGAGGGAGA+TGG 0.440596 4:+49204897 MsG0480020825.01.T01:CDS
TTGGGGAAGATTGAATGCTT+AGG 0.440620 4:-49207150 None:intergenic
CTTACTTCACTTCCTAAGAA+AGG 0.441936 4:+49203650 MsG0480020825.01.T01:CDS
AGGAAAGCCGAATAGTTTGC+AGG 0.443064 4:-49208117 None:intergenic
AATTGTGTACTCTAGAATTA+TGG 0.444292 4:+49209372 MsG0480020825.01.T01:three_prime_UTR
ATGATTTGGATCCCTATAGA+TGG 0.446543 4:+49206799 MsG0480020825.01.T01:CDS
CTCTTCTATGTACCTACAAA+TGG 0.447258 4:+49203136 MsG0480020825.01.T01:five_prime_UTR
TGTGGCTGAAGATCATAGTT+TGG 0.447773 4:-49203749 None:intergenic
TGATGATACTCATAGCTGTT+TGG 0.448093 4:+49209060 MsG0480020825.01.T01:CDS
CAATGATCTTCTGAGTGAAC+TGG 0.449039 4:+49208353 MsG0480020825.01.T01:CDS
GAACTATGGCATGCTTGTGC+TGG 0.452079 4:+49203623 MsG0480020825.01.T01:CDS
CTTGAAGATGAACAAGTTGA+AGG 0.457374 4:-49203566 None:intergenic
TACTCATAGCTGTTTGGATC+AGG 0.457597 4:+49209066 MsG0480020825.01.T01:CDS
CTTTAGACTCTAACTACTGT+TGG 0.457649 4:-49209145 None:intergenic
TTTCCTTTGTCTGGCGAACC+TGG 0.458093 4:+49208134 MsG0480020825.01.T01:CDS
AGTTAGAGTCTAAAGTTTCA+GGG 0.465120 4:+49209153 MsG0480020825.01.T01:exon
AACCTTGTCCCTATACTCAC+TGG 0.465299 4:-49206622 None:intergenic
AACCTGGCATCAACTGGAAT+AGG 0.466535 4:+49207654 MsG0480020825.01.T01:CDS
CGATCTCCCATGGCGATACT+CGG 0.468600 4:-49207105 None:intergenic
GGAATTAGAAGGAGATGATG+AGG 0.468694 4:+49204890 MsG0480020825.01.T01:CDS
TTCTGCTTCATTAGGGGATA+CGG 0.472517 4:+49208049 MsG0480020825.01.T01:CDS
TTCTTAGGAAGTGAAGTAAG+AGG 0.473214 4:-49203647 None:intergenic
ACTTCTTAGAGATTCTGATA+AGG 0.476305 4:+49208398 MsG0480020825.01.T01:CDS
GTGACATACAACAGGTAAGA+TGG 0.476656 4:+49207053 MsG0480020825.01.T01:intron
ATCACTGGTATGAATCCTAA+TGG 0.476712 4:+49207223 MsG0480020825.01.T01:CDS
CTAAAGTTTCAGGGTTGTGT+TGG 0.478705 4:+49209162 MsG0480020825.01.T01:exon
ATCAAGAATCCAGTGAGTAT+AGG 0.479733 4:+49206613 MsG0480020825.01.T01:CDS
AGGCGGCATCTACTCACAAC+TGG 0.483600 4:+49205733 MsG0480020825.01.T01:CDS
TGTAGTAGTGGTATGTTGAT+TGG 0.485540 4:+49206771 MsG0480020825.01.T01:CDS
AAACATGCAGATTGAAAACT+AGG 0.485809 4:-49207840 None:intergenic
GCAACCGCGGACCGGTCTAC+TGG 0.486331 4:+49207180 MsG0480020825.01.T01:CDS
TGGAAAGTAACAACTTTCCA+AGG 0.487409 4:+49207736 MsG0480020825.01.T01:CDS
GTTTAACACGCCATCGATAG+TGG 0.488043 4:+49207944 MsG0480020825.01.T01:CDS
AACACGCCATCGATAGTGGC+AGG 0.488155 4:+49207948 MsG0480020825.01.T01:CDS
AAATTTCGCCATATTTATAG+AGG 0.488170 4:+49205619 MsG0480020825.01.T01:CDS
TCTTGACCTTGCAAGACCCT+TGG 0.488979 4:-49207753 None:intergenic
TTTCTTGAGAGAGTCTCAAA+TGG 0.494706 4:-49203427 None:intergenic
TTGCAAGGTCAAGAAAATAC+AGG 0.496208 4:+49207552 MsG0480020825.01.T01:CDS
CCTTCAAAGTCTTCCTCAGT+TGG 0.496667 4:+49209106 MsG0480020825.01.T01:CDS
CATACCAGTGATGAGGTGAT+TGG 0.496922 4:-49207212 None:intergenic
TGAATGTGTTTGGTTTGGGG+TGG 0.498907 4:+49209444 MsG0480020825.01.T01:three_prime_UTR
AGAGCAGTTAGACCTAGAAA+TGG 0.500813 4:+49206295 MsG0480020825.01.T01:CDS
TGCAGATTGAAAACTAGGCT+TGG 0.506257 4:-49207835 None:intergenic
GAAAATGGAGAGCTGAGATT+GGG 0.510036 4:+49206265 MsG0480020825.01.T01:CDS
GTCTCTGATACGAGCACTCA+TGG 0.511750 4:+49204969 MsG0480020825.01.T01:CDS
CACTAAATAAGTGCTAGTCT+TGG 0.513447 4:+49209311 MsG0480020825.01.T01:three_prime_UTR
CATTCTCACTGTCAGTGTAA+AGG 0.513773 4:-49208431 None:intergenic
TATATATACCAAAGAAGAAG+TGG 0.514232 4:+49209009 MsG0480020825.01.T01:CDS
TGCTCAACTCAAAACCTGGC+TGG 0.515074 4:-49207614 None:intergenic
TGAATGCTTAGGGGAGGCTG+AGG 0.519404 4:-49207139 None:intergenic
GGTCTTCCTGAATCAATTGT+CGG 0.520841 4:+49206316 MsG0480020825.01.T01:CDS
GGGAACATTAGAAAAGAAGT+TGG 0.522575 4:+49207969 MsG0480020825.01.T01:CDS
CCTGCAGCTTATGCTCATCT+GGG 0.525700 4:-49208013 None:intergenic
ATTCAGTACTCACAAGTAGC+TGG 0.528164 4:-49203796 None:intergenic
GAATTAGAAGGAGATGATGA+GGG 0.528978 4:+49204891 MsG0480020825.01.T01:CDS
TACTCTGCTACCTCAGGCTG+AGG 0.529145 4:+49204104 MsG0480020825.01.T01:CDS
CCCAGATGAGCATAAGCTGC+AGG 0.530785 4:+49208013 MsG0480020825.01.T01:CDS
AGACTGAAGCAACCGCGGAC+CGG 0.531423 4:+49207172 MsG0480020825.01.T01:CDS
GAAGAGCCATTGACCTCTCT+AGG 0.534153 4:+49208319 MsG0480020825.01.T01:CDS
ACAGCTATGAGTATCATCAT+TGG 0.534267 4:-49209056 None:intergenic
GGCATCTACTCACAACTGGC+TGG 0.536364 4:+49205737 MsG0480020825.01.T01:CDS
TGAGAATGACATAATGGTTG+TGG 0.539248 4:+49208446 MsG0480020825.01.T01:CDS
CAACTCAAAACCTGGCTGGT+TGG 0.540058 4:-49207610 None:intergenic
TGGATGAATCACCAGAAAGA+AGG 0.543057 4:+49206662 MsG0480020825.01.T01:CDS
TCACCCAATCACCTCATCAC+TGG 0.544643 4:+49207208 MsG0480020825.01.T01:CDS
TTAGAGATTCTGATAAGGGA+TGG 0.545399 4:+49208403 MsG0480020825.01.T01:CDS
CCGCGGTTGCTTCAGTCTTG+GGG 0.545705 4:-49207167 None:intergenic
GCAGGAATCAGTGGAATGAT+GGG 0.546322 4:+49207498 MsG0480020825.01.T01:intron
TTCTGCTTCTGCTTCATTAG+GGG 0.547616 4:+49208043 MsG0480020825.01.T01:CDS
TTATGAATGTGTTTGGTTTG+GGG 0.550292 4:+49209441 MsG0480020825.01.T01:three_prime_UTR
TTTGGCAACAAGCTCTTGAG+AGG 0.551407 4:-49205575 None:intergenic
TAAGTGCTAGTCTTGGAAGT+TGG 0.551675 4:+49209318 MsG0480020825.01.T01:three_prime_UTR
AAGAAGAATACTTACTGCCA+TGG 0.552627 4:-49208477 None:intergenic
TCTAAACAATGAAGTGATTG+AGG 0.553452 4:+49203475 MsG0480020825.01.T01:CDS
CTGAGCTAACTAGCTCAAAA+GGG 0.554241 4:-49209245 None:intergenic
TGACAGTGAGAATGACATAA+TGG 0.554268 4:+49208440 MsG0480020825.01.T01:CDS
AATTGTTCTAAGTGACCTTG+TGG 0.563871 4:-49203692 None:intergenic
GGAAAAGCTGATTTCAACAT+CGG 0.565551 4:+49207801 MsG0480020825.01.T01:CDS
TGACATACAACAGGTAAGAT+GGG 0.566150 4:+49207054 MsG0480020825.01.T01:intron
GAGAATGACATAATGGTTGT+GGG 0.567615 4:+49208447 MsG0480020825.01.T01:CDS
ATGTTCCCTGCCACTATCGA+TGG 0.570468 4:-49207954 None:intergenic
CTATCTTGTAGGTGTAGTAG+TGG 0.570573 4:+49206759 MsG0480020825.01.T01:intron
ATACCAGTGATGAGGTGATT+GGG 0.571375 4:-49207211 None:intergenic
ACAAGTTACTCTGCTACCTC+AGG 0.572482 4:+49204098 MsG0480020825.01.T01:CDS
GAGATGATGAGGGAGATGGA+GGG 0.573908 4:+49204901 MsG0480020825.01.T01:CDS
ATAGGAAGCACAGAAACAAA+AGG 0.575186 4:-49203089 None:intergenic
TAGCATTTGCAACAGATGAA+AGG 0.577301 4:-49206363 None:intergenic
ATAAAGCCTGCATAACTGAA+AGG 0.578447 4:-49207714 None:intergenic
TTCACTTTATAGAATCCACT+TGG 0.578543 4:+49203341 MsG0480020825.01.T01:five_prime_UTR
GATTTCAACATCGGAGCTTG+GGG 0.582139 4:+49207810 MsG0480020825.01.T01:CDS
GACAAAGTAACCAACCAGCC+AGG 0.589462 4:+49207600 MsG0480020825.01.T01:CDS
TTTATGGCAGCAGGAATCAG+TGG 0.590392 4:+49207489 MsG0480020825.01.T01:intron
TAAATGAAGGTTCACAAGCA+AGG 0.591824 4:+49208285 MsG0480020825.01.T01:intron
ATCAAGACCGAGTATCGCCA+TGG 0.592676 4:+49207098 MsG0480020825.01.T01:CDS
TGTGTACTCTAGAATTATGG+TGG 0.595811 4:+49209375 MsG0480020825.01.T01:three_prime_UTR
ATTTCCACTCCACACCATGC+AGG 0.596067 4:-49205600 None:intergenic
AACTTTCCAAGGGTCTTGCA+AGG 0.597137 4:+49207747 MsG0480020825.01.T01:CDS
ACTGGAGAAACTATTTGGCA+TGG 0.598525 4:+49208371 MsG0480020825.01.T01:CDS
GAGAAACTATTTGGCATGGA+AGG 0.600086 4:+49208375 MsG0480020825.01.T01:CDS
TTCAAGTCATCATCAAAACC+TGG 0.600469 4:+49207638 MsG0480020825.01.T01:CDS
GAAAGATTTCATACCAAAGG+AGG 0.600755 4:-49205032 None:intergenic
GGGTGAGGTAACCAGTAGAC+CGG 0.601618 4:-49207191 None:intergenic
TCTTAGGAAGTGAAGTAAGA+GGG 0.602953 4:-49203646 None:intergenic
GTTGTGAGTAGATGCCGCCT+TGG 0.606611 4:-49205730 None:intergenic
GTGTCTTGCAGAACATGTGA+GGG 0.607798 4:-49204941 None:intergenic
TAAATTTGTCAGGTCAGCCA+AGG 0.607995 4:+49205713 MsG0480020825.01.T01:intron
GAAGAAAGATCGATCTCCCA+TGG 0.608121 4:-49207115 None:intergenic
ACAACAGGTAAGATGGGATG+AGG 0.612245 4:+49207060 MsG0480020825.01.T01:intron
CTACCAGGTTCGCCAGACAA+AGG 0.612527 4:-49208137 None:intergenic
ATTTGTAGGTACATAGAAGA+GGG 0.613006 4:-49203134 None:intergenic
GTTGGCAGGGATGCATATGG+AGG 0.615211 4:+49204854 MsG0480020825.01.T01:intron
GAAGTGCTCAACTCAAAACC+TGG 0.615230 4:-49207618 None:intergenic
GCTTTGTCAATATCTCCGTA+AGG 0.616225 4:-49207864 None:intergenic
AGTGTCTTGCAGAACATGTG+AGG 0.616842 4:-49204942 None:intergenic
TATGGAGGGAAAAGAAGTTG+AGG 0.617895 4:+49204869 MsG0480020825.01.T01:CDS
GGAAAGTAACAACTTTCCAA+GGG 0.618100 4:+49207737 MsG0480020825.01.T01:CDS
AGATCACCAAAGGTCTTGCA+AGG 0.621574 4:+49207537 MsG0480020825.01.T01:CDS
GAAGACAGAGACAATTGCAT+AGG 0.621616 4:-49203107 None:intergenic
AAAGGCAAGTAAAGCCAATG+TGG 0.622004 4:-49203071 None:intergenic
ATAATCTGGCTGACCAACTG+AGG 0.623428 4:-49209119 None:intergenic
CATTTGTAGGTACATAGAAG+AGG 0.624421 4:-49203135 None:intergenic
TAGCCAAAATTTACAGAACA+CGG 0.629316 4:+49208157 MsG0480020825.01.T01:CDS
AAGACCTGCATGGTGTGGAG+TGG 0.629896 4:+49205596 MsG0480020825.01.T01:CDS
GAGATTCTGATAAGGGATGG+AGG 0.631623 4:+49208406 MsG0480020825.01.T01:CDS
TTTCATATTTCATGTCATGG+TGG 0.631774 4:+49209399 MsG0480020825.01.T01:three_prime_UTR
TGCCAAAGACCTGCATGGTG+TGG 0.632330 4:+49205591 MsG0480020825.01.T01:CDS
TTGGCAACAAGCTCTTGAGA+GGG 0.634142 4:-49205574 None:intergenic
AGTGATGAGGTGATTGGGTG+AGG 0.637047 4:-49207206 None:intergenic
CCCCAAGACTGAAGCAACCG+CGG 0.638902 4:+49207167 MsG0480020825.01.T01:CDS
GCTCAACCTAGAGAGGTCAA+TGG 0.642235 4:-49208325 None:intergenic
GGGGAAGATTGAATGCTTAG+GGG 0.646242 4:-49207148 None:intergenic
TCCTAAGAAAGGAAATGCTG+TGG 0.646329 4:+49203661 MsG0480020825.01.T01:CDS
TAGGATTCATACCAGTGATG+AGG 0.646397 4:-49207219 None:intergenic
TGTAGCCGCTCAACCTAGAG+AGG 0.646576 4:-49208332 None:intergenic
TATGAATCCTAATGGTGAGA+TGG 0.646729 4:+49207231 MsG0480020825.01.T01:CDS
ATCCAGTGAGTATAGGGACA+AGG 0.648334 4:+49206620 MsG0480020825.01.T01:CDS
TTGGCAGGGATGCATATGGA+GGG 0.649105 4:+49204855 MsG0480020825.01.T01:CDS
AGATAAGAAGAAGAAACAAG+TGG 0.649698 4:-49203599 None:intergenic
AAGGCAAGTAAAGCCAATGT+GGG 0.652062 4:-49203070 None:intergenic
ATTGACCTCTCTAGGTTGAG+CGG 0.652349 4:+49208327 MsG0480020825.01.T01:CDS
GATGGCCTAAATCAAAATGG+AGG 0.658795 4:+49206817 MsG0480020825.01.T01:CDS
GGAGTCAGTAAGATCACCAA+AGG 0.663614 4:+49207527 MsG0480020825.01.T01:CDS
ACAACCCTGCAAAAGATCTG+TGG 0.666650 4:-49203767 None:intergenic
TCAAGACCGAGTATCGCCAT+GGG 0.667440 4:+49207099 MsG0480020825.01.T01:CDS
GCAGCTTATGCTCATCTGGG+AGG 0.672574 4:-49208010 None:intergenic
ACACGCCATCGATAGTGGCA+GGG 0.674307 4:+49207949 MsG0480020825.01.T01:CDS
GAAGATTGAATGCTTAGGGG+AGG 0.675718 4:-49207145 None:intergenic
ATTTGTCAGGTCAGCCAAGG+CGG 0.677198 4:+49205716 MsG0480020825.01.T01:intron
GAATGACATAATGGTTGTGG+GGG 0.679524 4:+49208449 MsG0480020825.01.T01:CDS
AGAATGACATAATGGTTGTG+GGG 0.682622 4:+49208448 MsG0480020825.01.T01:CDS
GGCCAACAAGGAGAATGATG+AGG 0.688468 4:+49204068 MsG0480020825.01.T01:intron
CAATCTTCAGCAGCTCTACG+AGG 0.704658 4:-49205005 None:intergenic
TCTGATACGAGCACTCATGG+TGG 0.704836 4:+49204972 MsG0480020825.01.T01:CDS
CTTGTTGCCAAAGACCTGCA+TGG 0.711328 4:+49205586 MsG0480020825.01.T01:CDS
ATTAACACTCATAAGCTCAG+AGG 0.715454 4:-49207691 None:intergenic
GTAACCAGTAGACCGGTCCG+CGG 0.729539 4:-49207184 None:intergenic
TGTCTTGCAGAACATGTGAG+GGG 0.734062 4:-49204940 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAAATCAATAAAATCAT+TGG + Chr4:49206525-49206544 MsG0480020825.01.T01:intron 10.0%
!! TTATTTAAAGATAGAAAAAA+GGG - Chr4:49203372-49203391 None:intergenic 10.0%
!! TTTATTTAAAGATAGAAAAA+AGG - Chr4:49203373-49203392 None:intergenic 10.0%
!!! AAATATTTTTAATGATGAAA+CGG + Chr4:49207010-49207029 MsG0480020825.01.T01:intron 10.0%
!! ATATAATATACACTAAATGA+AGG + Chr4:49208272-49208291 MsG0480020825.01.T01:intron 15.0%
!! ATTAAATTGTTTATCCAAAA+AGG + Chr4:49205483-49205502 MsG0480020825.01.T01:intron 15.0%
!!! AATATTTTTATGAATGTGTT+TGG + Chr4:49209434-49209453 MsG0480020825.01.T01:three_prime_UTR 15.0%
!!! TGATTTTTTCAAATTTTTAG+CGG + Chr4:49203954-49203973 MsG0480020825.01.T01:intron 15.0%
!!! TTTTTAATGTTCTTTATGTT+TGG + Chr4:49204139-49204158 MsG0480020825.01.T01:intron 15.0%
!!! TTTTTTTCATATTACAAACA+AGG - Chr4:49203260-49203279 None:intergenic 15.0%
!! AAAGATAAGAAAAAAAAGGA+AGG - Chr4:49203234-49203253 None:intergenic 20.0%
!! AACAAAGAAAGAATATGATT+AGG - Chr4:49207466-49207485 None:intergenic 20.0%
!! AATAGATTGAATGTATTCTT+AGG + Chr4:49207327-49207346 MsG0480020825.01.T01:intron 20.0%
!! AGTAATGAATATTTATGGTT+TGG + Chr4:49205969-49205988 MsG0480020825.01.T01:intron 20.0%
!! ATCCTATAGTAAAAAGTAAA+AGG - Chr4:49205539-49205558 None:intergenic 20.0%
!! CAATAGTAAATAAACATGTT+TGG - Chr4:49204174-49204193 None:intergenic 20.0%
!! CTTTGAATAATTGATGTATT+TGG + Chr4:49204303-49204322 MsG0480020825.01.T01:intron 20.0%
!! GCTTAAAGATAAGAAAAAAA+AGG - Chr4:49203238-49203257 None:intergenic 20.0%
!! TATAAATGATGAGTTATGAT+TGG - Chr4:49206961-49206980 None:intergenic 20.0%
!! TATTCAAAGTTACTCAAAAT+GGG - Chr4:49204812-49204831 None:intergenic 20.0%
!! TTACATTACCTCTATAAATA+TGG - Chr4:49205630-49205649 None:intergenic 20.0%
!!! AAATTCTTGTTTCTTTTAAC+AGG + Chr4:49204047-49204066 MsG0480020825.01.T01:intron 20.0%
!!! CATCATTTATATGACTTTTA+AGG + Chr4:49206970-49206989 MsG0480020825.01.T01:intron 20.0%
!!! CTTTTAACATATTTTTGGTA+CGG - Chr4:49206592-49206611 None:intergenic 20.0%
!!! CTTTTATAAATGACTTTGTA+GGG + Chr4:49206240-49206259 MsG0480020825.01.T01:intron 20.0%
!!! TATAATTTGATGTTGCATTT+TGG + Chr4:49209216-49209235 MsG0480020825.01.T01:three_prime_UTR 20.0%
!!! TGAATTCATGTAACATATTT+TGG + Chr4:49204016-49204035 MsG0480020825.01.T01:intron 20.0%
!!! TGATGCTTTTAACATATTTT+TGG - Chr4:49206597-49206616 None:intergenic 20.0%
!!! TTCTTTCTTTGTTTCATTTA+TGG + Chr4:49207473-49207492 MsG0480020825.01.T01:intron 20.0%
!!! TTTATCCTTAGATTTTGATT+TGG + Chr4:49206494-49206513 MsG0480020825.01.T01:intron 20.0%
!!! TTTTATAAATGACTTTGTAG+GGG + Chr4:49206241-49206260 MsG0480020825.01.T01:intron 20.0%
!!! TTTTTCTCCTTTTAAACAAT+TGG + Chr4:49203721-49203740 MsG0480020825.01.T01:CDS 20.0%
! AAATTCGAAAACAACTTAGA+TGG - Chr4:49204577-49204596 None:intergenic 25.0%
! AAATTTCGCCATATTTATAG+AGG + Chr4:49205619-49205638 MsG0480020825.01.T01:CDS 25.0%
! AAGTGAAATTCAAAAAGTTG+AGG - Chr4:49203328-49203347 None:intergenic 25.0%
! AATATGGTACTAAATTTGTC+AGG + Chr4:49205703-49205722 MsG0480020825.01.T01:intron 25.0%
! AATCGATGCACAAAATAATA+TGG + Chr4:49205687-49205706 MsG0480020825.01.T01:intron 25.0%
! ACCATAAATATTCATTACTC+AGG - Chr4:49205968-49205987 None:intergenic 25.0%
! ACCTGAGTAATGAATATTTA+TGG + Chr4:49205964-49205983 MsG0480020825.01.T01:intron 25.0%
! ATGTGGAACTTAAATGAAAA+CGG + Chr4:49205376-49205395 MsG0480020825.01.T01:intron 25.0%
! CCAAATGATAAAAATGTCAA+GGG + Chr4:49208083-49208102 MsG0480020825.01.T01:CDS 25.0%
! CTATTCAAAGTTACTCAAAA+TGG - Chr4:49204813-49204832 None:intergenic 25.0%
! CTTCTTCTTTGGTATATATA+TGG - Chr4:49209009-49209028 None:intergenic 25.0%
! GAAGTTTGATTCTTTCTATT+TGG + Chr4:49205107-49205126 MsG0480020825.01.T01:intron 25.0%
! GATGGTTAATGAATATAACA+AGG - Chr4:49204517-49204536 None:intergenic 25.0%
! GATTAACTACATTAAACTGA+TGG - Chr4:49204535-49204554 None:intergenic 25.0%
! GTAAGTATTCTTCTTCTTTA+TGG + Chr4:49208485-49208504 MsG0480020825.01.T01:intron 25.0%
! GTATAGTATCATGAAAAATG+AGG - Chr4:49203300-49203319 None:intergenic 25.0%
! GTTCAAAATGAGAATTGAAA+TGG + Chr4:49206642-49206661 MsG0480020825.01.T01:CDS 25.0%
! GTTGATTGGAATAAATGATT+TGG + Chr4:49206785-49206804 MsG0480020825.01.T01:CDS 25.0%
! TAGTATAGTTAGCATTAAAC+TGG - Chr4:49204747-49204766 None:intergenic 25.0%
! TATAGTCAAATTTCAAAAGC+AGG + Chr4:49206099-49206118 MsG0480020825.01.T01:intron 25.0%
! TATATATACCAAAGAAGAAG+TGG + Chr4:49209009-49209028 MsG0480020825.01.T01:CDS 25.0%
! TCAAATTGTGTGTCAAAATA+TGG - Chr4:49204212-49204231 None:intergenic 25.0%
! TCCAAATGATAAAAATGTCA+AGG + Chr4:49208082-49208101 MsG0480020825.01.T01:CDS 25.0%
! TCCAATTTATGAAAACAATG+TGG + Chr4:49205359-49205378 MsG0480020825.01.T01:intron 25.0%
! TGATTTGAAAGATACTAGAA+TGG - Chr4:49206214-49206233 None:intergenic 25.0%
! TTCAGTGTAATTATATGTGT+CGG - Chr4:49203929-49203948 None:intergenic 25.0%
! TTTGAAGGTTCAATAATAAC+TGG - Chr4:49209094-49209113 None:intergenic 25.0%
! TTTGAGTAACTTTGAATAGA+TGG + Chr4:49204814-49204833 MsG0480020825.01.T01:intron 25.0%
!! AAGACCGTGTTTATAAATTT+TGG - Chr4:49207440-49207459 None:intergenic 25.0%
!! AGACCGTGTTTATAAATTTT+GGG - Chr4:49207439-49207458 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCAAAC+TGG + Chr4:49208920-49208939 MsG0480020825.01.T01:intron 25.0%
!! ATTTTACATTACCTTCTTTC+TGG - Chr4:49206676-49206695 None:intergenic 25.0%
!! GCTTTTATAAATGACTTTGT+AGG + Chr4:49206239-49206258 MsG0480020825.01.T01:intron 25.0%
!! TCCACATTGTTTTCATAAAT+TGG - Chr4:49205363-49205382 None:intergenic 25.0%
!! TCTATCTTAGAGTGTTTAAT+AGG - Chr4:49205239-49205258 None:intergenic 25.0%
!! TCTTTATTTGACAGTATAGT+TGG - Chr4:49206176-49206195 None:intergenic 25.0%
!! TTAAGTTGTTTATCCAAACT+GGG + Chr4:49208921-49208940 MsG0480020825.01.T01:intron 25.0%
!! TTTATGAATGTGTTTGGTTT+GGG + Chr4:49209440-49209459 MsG0480020825.01.T01:three_prime_UTR 25.0%
!! TTTTATGAATGTGTTTGGTT+TGG + Chr4:49209439-49209458 MsG0480020825.01.T01:three_prime_UTR 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG + Chr4:49204380-49204399 MsG0480020825.01.T01:intron 25.0%
!!! AATTGTGTACTCTAGAATTA+TGG + Chr4:49209372-49209391 MsG0480020825.01.T01:three_prime_UTR 25.0%
!!! CTAAATCTCCATTTTATTTG+TGG + Chr4:49205507-49205526 MsG0480020825.01.T01:intron 25.0%
!!! CTCCTTTTACTTTTTACTAT+AGG + Chr4:49205534-49205553 MsG0480020825.01.T01:intron 25.0%
!!! GTTTGATCATTTTTCAATTG+TGG + Chr4:49203393-49203412 MsG0480020825.01.T01:five_prime_UTR 25.0%
!!! TTTGAATAGATGGATTGTTT+TGG + Chr4:49204824-49204843 MsG0480020825.01.T01:intron 25.0%
AAACATGCAGATTGAAAACT+AGG - Chr4:49207843-49207862 None:intergenic 30.0%
AAAGAACCTAAAAAGTTGAC+CGG - Chr4:49204287-49204306 None:intergenic 30.0%
AAAGAAGTTGAGGAATTAGA+AGG + Chr4:49204879-49204898 MsG0480020825.01.T01:CDS 30.0%
AAGTATGTTCTTTCCTAGTT+TGG - Chr4:49206037-49206056 None:intergenic 30.0%
AATAGGCTGAAAACAACTTA+TGG - Chr4:49205222-49205241 None:intergenic 30.0%
AATCTCAAGTTTGATTCCAT+CGG - Chr4:49206153-49206172 None:intergenic 30.0%
AATTCAAAAAGTTGAGGCTA+TGG - Chr4:49203322-49203341 None:intergenic 30.0%
ACACAATTCTCAAGAGATAT+TGG - Chr4:49209360-49209379 None:intergenic 30.0%
ACTTCTTAGAGATTCTGATA+AGG + Chr4:49208398-49208417 MsG0480020825.01.T01:CDS 30.0%
AGATAAGAAGAAGAAACAAG+TGG - Chr4:49203602-49203621 None:intergenic 30.0%
ATAGATGGCCTAAATCAAAA+TGG + Chr4:49206814-49206833 MsG0480020825.01.T01:CDS 30.0%
ATATTGTCTTCCTATCTTGT+AGG + Chr4:49206748-49206767 MsG0480020825.01.T01:intron 30.0%
ATTCCATTATCTCCATTTGT+AGG - Chr4:49203151-49203170 None:intergenic 30.0%
ATTTGTAGGTACATAGAAGA+GGG - Chr4:49203137-49203156 None:intergenic 30.0%
CACAACCAAATCAAAATCTA+AGG - Chr4:49206502-49206521 None:intergenic 30.0%
CACATTATCACTCATGAAAT+TGG - Chr4:49207922-49207941 None:intergenic 30.0%
CAGTTAATTGTCAATCTTTC+TGG - Chr4:49209291-49209310 None:intergenic 30.0%
CATTGAATAACTGATGTATC+TGG - Chr4:49204342-49204361 None:intergenic 30.0%
CTTCTTAGAGATTCTGATAA+GGG + Chr4:49208399-49208418 MsG0480020825.01.T01:CDS 30.0%
CTTCTTCTTATCTTGAACTA+TGG + Chr4:49203609-49203628 MsG0480020825.01.T01:CDS 30.0%
GACCCCAAAATTTATAAACA+CGG + Chr4:49207433-49207452 MsG0480020825.01.T01:intron 30.0%
GATTAACTACTTTCAGTAGA+TGG + Chr4:49204246-49204265 MsG0480020825.01.T01:intron 30.0%
GGTATCTCCAATTGTTTAAA+AGG - Chr4:49203731-49203750 None:intergenic 30.0%
TAATAATCTTTGAATGCCGA+TGG + Chr4:49206134-49206153 MsG0480020825.01.T01:intron 30.0%
TAGCCAAAATTTACAGAACA+CGG + Chr4:49208157-49208176 MsG0480020825.01.T01:CDS 30.0%
TATAGTTAGCATTAAACTGG+TGG - Chr4:49204744-49204763 None:intergenic 30.0%
TCCTTTGGTATGAAATCTTT+CGG + Chr4:49205034-49205053 MsG0480020825.01.T01:intron 30.0%
TCTAAACAATGAAGTGATTG+AGG + Chr4:49203475-49203494 MsG0480020825.01.T01:CDS 30.0%
TGAGAAATGAGAGACTATTT+GGG + Chr4:49205167-49205186 MsG0480020825.01.T01:intron 30.0%
TGATAAAAATGTCAAGGGAA+AGG + Chr4:49208088-49208107 MsG0480020825.01.T01:CDS 30.0%
TTATAGAAATGATCTGCAGA+GGG + Chr4:49208770-49208789 MsG0480020825.01.T01:intron 30.0%
TTCACTTTATAGAATCCACT+TGG + Chr4:49203341-49203360 MsG0480020825.01.T01:five_prime_UTR 30.0%
TTGAGAAATGAGAGACTATT+TGG + Chr4:49205166-49205185 MsG0480020825.01.T01:intron 30.0%
TTTCATATTTCATGTCATGG+TGG + Chr4:49209399-49209418 MsG0480020825.01.T01:three_prime_UTR 30.0%
! AACCAAAAGAATCTTGTTTC+TGG + Chr4:49205772-49205791 MsG0480020825.01.T01:CDS 30.0%
! AATGGAGATTTAGACCTTTT+TGG - Chr4:49205500-49205519 None:intergenic 30.0%
! AGTTAGAGTCTAAAGTTTCA+GGG + Chr4:49209153-49209172 MsG0480020825.01.T01:exon 30.0%
! CCCTTGACATTTTTATCATT+TGG - Chr4:49208086-49208105 None:intergenic 30.0%
! GAAAACATGAAACATGCTTT+TGG - Chr4:49206395-49206414 None:intergenic 30.0%
! GACCGTGTTTATAAATTTTG+GGG - Chr4:49207438-49207457 None:intergenic 30.0%
! GGTTTTCATATTTCATGTCA+TGG + Chr4:49209396-49209415 MsG0480020825.01.T01:three_prime_UTR 30.0%
! TAGTTAGAGTCTAAAGTTTC+AGG + Chr4:49209152-49209171 MsG0480020825.01.T01:exon 30.0%
! TTCATGTTTTCTATAGTCCA+AGG + Chr4:49206404-49206423 MsG0480020825.01.T01:CDS 30.0%
! TTTGATTTAGGCCATCTATA+GGG - Chr4:49206813-49206832 None:intergenic 30.0%
!! AACCTTTTTCACATTCCTTA+AGG - Chr4:49203520-49203539 None:intergenic 30.0%
!! AGTTTTCTAGTGTTCTGTTT+TGG + Chr4:49208950-49208969 MsG0480020825.01.T01:intron 30.0%
!! ATGGTTTGGTACTAATATCA+AGG + Chr4:49205983-49206002 MsG0480020825.01.T01:intron 30.0%
!! ATGTCAAGAAACTGTTTTGA+AGG - Chr4:49206727-49206746 None:intergenic 30.0%
!! GGTTTTATGTCACTATACTA+TGG + Chr4:49207573-49207592 MsG0480020825.01.T01:CDS 30.0%
!! TTATGAATGTGTTTGGTTTG+GGG + Chr4:49209441-49209460 MsG0480020825.01.T01:three_prime_UTR 30.0%
!!! CTTAGATTTTGATTTGGTTG+TGG + Chr4:49206500-49206519 MsG0480020825.01.T01:intron 30.0%
!!! TTTCAAATTTTTAGCGGTGT+CGG + Chr4:49203960-49203979 MsG0480020825.01.T01:intron 30.0%
!!! TTTTGATTTAGGCCATCTAT+AGG - Chr4:49206814-49206833 None:intergenic 30.0%
AACTTCATTAACCACTGTTG+AGG - Chr4:49204446-49204465 None:intergenic 35.0%
AAGAACCTAAAAAGTTGACC+GGG - Chr4:49204286-49204305 None:intergenic 35.0%
AAGAAGAATACTTACTGCCA+TGG - Chr4:49208480-49208499 None:intergenic 35.0%
AAGTGGAGAAGATGACATTT+GGG + Chr4:49209026-49209045 MsG0480020825.01.T01:CDS 35.0%
ACAGCTATGAGTATCATCAT+TGG - Chr4:49209059-49209078 None:intergenic 35.0%
ACCGAAAGATTTCATACCAA+AGG - Chr4:49205038-49205057 None:intergenic 35.0%
ACTACTGTTGGAGAATAATC+TGG - Chr4:49209136-49209155 None:intergenic 35.0%
ACTTCATTAACCACTGTTGA+GGG - Chr4:49204445-49204464 None:intergenic 35.0%
AGAAAAGAAGTTGGAAGATC+TGG + Chr4:49207978-49207997 MsG0480020825.01.T01:CDS 35.0%
AGAAACAAAGACAGTGTTCA+TGG + Chr4:49203445-49203464 MsG0480020825.01.T01:exon 35.0%
AGAATGACATAATGGTTGTG+GGG + Chr4:49208448-49208467 MsG0480020825.01.T01:CDS 35.0%
AGTAAACAACCTATGAAGCA+CGG - Chr4:49203997-49204016 None:intergenic 35.0%
AGTGAACTGGAGAAACTATT+TGG + Chr4:49208366-49208385 MsG0480020825.01.T01:CDS 35.0%
AGTTAGTTGTGTTTAGTGGA+TGG + Chr4:49204475-49204494 MsG0480020825.01.T01:intron 35.0%
ATAAAGCCTGCATAACTGAA+AGG - Chr4:49207717-49207736 None:intergenic 35.0%
ATCAAGAATCCAGTGAGTAT+AGG + Chr4:49206613-49206632 MsG0480020825.01.T01:CDS 35.0%
ATCACTGGTATGAATCCTAA+TGG + Chr4:49207223-49207242 MsG0480020825.01.T01:CDS 35.0%
ATGGTTAATGAATACTTCCC+CGG + Chr4:49204265-49204284 MsG0480020825.01.T01:intron 35.0%
ATTAACACTCATAAGCTCAG+AGG - Chr4:49207694-49207713 None:intergenic 35.0%
ATTTACAGAACACGGCAAAA+AGG + Chr4:49208165-49208184 MsG0480020825.01.T01:CDS 35.0%
CATTTGTAGGTACATAGAAG+AGG - Chr4:49203138-49203157 None:intergenic 35.0%
CTCTTCTATGTACCTACAAA+TGG + Chr4:49203136-49203155 MsG0480020825.01.T01:five_prime_UTR 35.0%
CTTACTTCACTTCCTAAGAA+AGG + Chr4:49203650-49203669 MsG0480020825.01.T01:CDS 35.0%
CTTTAGACTCTAACTACTGT+TGG - Chr4:49209148-49209167 None:intergenic 35.0%
CTTTCACATCTCAACATTTC+AGG - Chr4:49204681-49204700 None:intergenic 35.0%
GAAAACTTAAATGCCCAGTT+TGG - Chr4:49208937-49208956 None:intergenic 35.0%
GAAAGATTTCATACCAAAGG+AGG - Chr4:49205035-49205054 None:intergenic 35.0%
GAATTAGAAGGAGATGATGA+GGG + Chr4:49204891-49204910 MsG0480020825.01.T01:CDS 35.0%
GAGAATGACATAATGGTTGT+GGG + Chr4:49208447-49208466 MsG0480020825.01.T01:CDS 35.0%
GCAAATTCCTGCAAACTATT+CGG + Chr4:49208110-49208129 MsG0480020825.01.T01:CDS 35.0%
GCAACAGATGAAAGGAAATT+GGG - Chr4:49206358-49206377 None:intergenic 35.0%
GCTTAGTACTACATGTATCA+GGG + Chr4:49207267-49207286 MsG0480020825.01.T01:intron 35.0%
GGAAAGTAACAACTTTCCAA+GGG + Chr4:49207737-49207756 MsG0480020825.01.T01:CDS 35.0%
GGAGCAATCCACAAATAAAA+TGG - Chr4:49205518-49205537 None:intergenic 35.0%
GGGAACATTAGAAAAGAAGT+TGG + Chr4:49207969-49207988 MsG0480020825.01.T01:CDS 35.0%
GTACCTACAAATGGAGATAA+TGG + Chr4:49203145-49203164 MsG0480020825.01.T01:five_prime_UTR 35.0%
GTTAATCCTTTCAGTTATGC+AGG + Chr4:49207708-49207727 MsG0480020825.01.T01:CDS 35.0%
GTTAGTTAGTACTCTTACCT+TGG - Chr4:49206424-49206443 None:intergenic 35.0%
GTTATAGAAATGATCTGCAG+AGG + Chr4:49208769-49208788 MsG0480020825.01.T01:intron 35.0%
TAAATGAAGGTTCACAAGCA+AGG + Chr4:49208285-49208304 MsG0480020825.01.T01:intron 35.0%
TACATGTATCAGGGTCTATT+TGG + Chr4:49207276-49207295 MsG0480020825.01.T01:intron 35.0%
TAGCATTTGCAACAGATGAA+AGG - Chr4:49206366-49206385 None:intergenic 35.0%
TATGAATCCTAATGGTGAGA+TGG + Chr4:49207231-49207250 MsG0480020825.01.T01:CDS 35.0%
TCAAGAATCCAGTGAGTATA+GGG + Chr4:49206614-49206633 MsG0480020825.01.T01:CDS 35.0%
TCCACTAAACACAACTAACT+AGG - Chr4:49204475-49204494 None:intergenic 35.0%
TCCTAGTTAGTTGTGTTTAG+TGG + Chr4:49204471-49204490 MsG0480020825.01.T01:intron 35.0%
TCTTAGGAAGTGAAGTAAGA+GGG - Chr4:49203649-49203668 None:intergenic 35.0%
TGACAGTGAGAATGACATAA+TGG + Chr4:49208440-49208459 MsG0480020825.01.T01:CDS 35.0%
TGAGAATGACATAATGGTTG+TGG + Chr4:49208446-49208465 MsG0480020825.01.T01:CDS 35.0%
TGATGATACTCATAGCTGTT+TGG + Chr4:49209060-49209079 MsG0480020825.01.T01:CDS 35.0%
TGCAACAGATGAAAGGAAAT+TGG - Chr4:49206359-49206378 None:intergenic 35.0%
TGCCTTAAGGAATGTGAAAA+AGG + Chr4:49203515-49203534 MsG0480020825.01.T01:CDS 35.0%
TGCTTAGTACTACATGTATC+AGG + Chr4:49207266-49207285 MsG0480020825.01.T01:intron 35.0%
TGGAAAGTAACAACTTTCCA+AGG + Chr4:49207736-49207755 MsG0480020825.01.T01:CDS 35.0%
TGTAAACTGAAATCCCTTTC+AGG + Chr4:49207780-49207799 MsG0480020825.01.T01:CDS 35.0%
TGTAGTAGTGGTATGTTGAT+TGG + Chr4:49206771-49206790 MsG0480020825.01.T01:CDS 35.0%
TTAGAGATTCTGATAAGGGA+TGG + Chr4:49208403-49208422 MsG0480020825.01.T01:CDS 35.0%
TTAGCTCAGCAAAAATTGCA+TGG + Chr4:49209259-49209278 MsG0480020825.01.T01:three_prime_UTR 35.0%
TTCAAGTCATCATCAAAACC+TGG + Chr4:49207638-49207657 MsG0480020825.01.T01:CDS 35.0%
TTCTCAAATTAGACTTGTCC+CGG + Chr4:49203867-49203886 MsG0480020825.01.T01:intron 35.0%
TTCTCATTCACAAGAAGTCA+TGG - Chr4:49206066-49206085 None:intergenic 35.0%
TTCTTAGGAAGTGAAGTAAG+AGG - Chr4:49203650-49203669 None:intergenic 35.0%
TTGCAAGGTCAAGAAAATAC+AGG + Chr4:49207552-49207571 MsG0480020825.01.T01:CDS 35.0%
TTTCAGTTATGCAGGCTTTA+TGG + Chr4:49207716-49207735 MsG0480020825.01.T01:CDS 35.0%
TTTCTGCTTCTGCTTCATTA+GGG + Chr4:49208042-49208061 MsG0480020825.01.T01:CDS 35.0%
TTTCTTGAGAGAGTCTCAAA+TGG - Chr4:49203430-49203449 None:intergenic 35.0%
TTTGTTTCATTTATGGCAGC+AGG + Chr4:49207480-49207499 MsG0480020825.01.T01:intron 35.0%
! AACATGAAACATGCTTTTGG+TGG - Chr4:49206392-49206411 None:intergenic 35.0%
! AATTGTTCTAAGTGACCTTG+TGG - Chr4:49203695-49203714 None:intergenic 35.0%
! ACTGTTTTCATAAGCTATCC+TGG - Chr4:49208714-49208733 None:intergenic 35.0%
! ATAGGAAGCACAGAAACAAA+AGG - Chr4:49203092-49203111 None:intergenic 35.0%
! ATGATTTGGATCCCTATAGA+TGG + Chr4:49206799-49206818 MsG0480020825.01.T01:CDS 35.0%
! CAATCTGCATGTTTTCCTTA+CGG + Chr4:49207849-49207868 MsG0480020825.01.T01:CDS 35.0%
! CACCAGAAACAAGATTCTTT+TGG - Chr4:49205777-49205796 None:intergenic 35.0%
! CACTAAATAAGTGCTAGTCT+TGG + Chr4:49209311-49209330 MsG0480020825.01.T01:three_prime_UTR 35.0%
! CTTGAAGATGAACAAGTTGA+AGG - Chr4:49203569-49203588 None:intergenic 35.0%
! GAAATCAGCTTTTCCTGAAA+GGG - Chr4:49207796-49207815 None:intergenic 35.0%
! GGAAAAGCTGATTTCAACAT+CGG + Chr4:49207801-49207820 MsG0480020825.01.T01:CDS 35.0%
! TGAAATCAGCTTTTCCTGAA+AGG - Chr4:49207797-49207816 None:intergenic 35.0%
! TGAAGATTGTTTTCCTCCTT+TGG + Chr4:49205019-49205038 MsG0480020825.01.T01:CDS 35.0%
! TGATTACCGACAATTGATTC+AGG - Chr4:49206325-49206344 None:intergenic 35.0%
! TTGCCGTGTTCTGTAAATTT+TGG - Chr4:49208163-49208182 None:intergenic 35.0%
! TTTCTTTTAACAGGCCAACA+AGG + Chr4:49204056-49204075 MsG0480020825.01.T01:intron 35.0%
!! GGCACTTCTAGGATATAAAT+AGG - Chr4:49205846-49205865 None:intergenic 35.0%
!! TGTGTACTCTAGAATTATGG+TGG + Chr4:49209375-49209394 MsG0480020825.01.T01:three_prime_UTR 35.0%
!!! AAGCACCTCCATTTTGATTT+AGG - Chr4:49206825-49206844 None:intergenic 35.0%
!!! GATTGTTTTGGCTTTTCAGT+TGG + Chr4:49204836-49204855 MsG0480020825.01.T01:intron 35.0%
!!! TGTTTTGAAGGAAGAAATCG+TGG - Chr4:49206715-49206734 None:intergenic 35.0%
!!! TTCTGTAAATTTTGGCTACC+AGG - Chr4:49208155-49208174 None:intergenic 35.0%
AACCTCATCATTCTCCTTGT+TGG - Chr4:49204073-49204092 None:intergenic 40.0%
AAGCATACCATCTCACCATT+AGG - Chr4:49207241-49207260 None:intergenic 40.0%
AAGGTATGTGTGTTTGTGCA+TGG + Chr4:49205813-49205832 MsG0480020825.01.T01:intron 40.0%
ACCACAGCATTTCCTTTCTT+AGG - Chr4:49203665-49203684 None:intergenic 40.0%
ACTATCGATGGCGTGTTAAA+CGG - Chr4:49207945-49207964 None:intergenic 40.0%
ACTGGAGAAACTATTTGGCA+TGG + Chr4:49208371-49208390 MsG0480020825.01.T01:CDS 40.0%
AGAACCTAAAAAGTTGACCG+GGG - Chr4:49204285-49204304 None:intergenic 40.0%
AGAGCAGTTAGACCTAGAAA+TGG + Chr4:49206295-49206314 MsG0480020825.01.T01:CDS 40.0%
AGCTTTCTGTGACATACAAC+AGG + Chr4:49207045-49207064 MsG0480020825.01.T01:intron 40.0%
ATACCAGTGATGAGGTGATT+GGG - Chr4:49207214-49207233 None:intergenic 40.0%
ATCTGTTATACTACTCCCTC+CGG - Chr4:49204402-49204421 None:intergenic 40.0%
ATTCAGTACTCACAAGTAGC+TGG - Chr4:49203799-49203818 None:intergenic 40.0%
CAATGATCTTCTGAGTGAAC+TGG + Chr4:49208353-49208372 MsG0480020825.01.T01:CDS 40.0%
CACTACTACACCTACAAGAT+AGG - Chr4:49206761-49206780 None:intergenic 40.0%
CATCTTCTCCACTTCTTCTT+TGG - Chr4:49209020-49209039 None:intergenic 40.0%
CATTCTCACTGTCAGTGTAA+AGG - Chr4:49208434-49208453 None:intergenic 40.0%
CTAAAGTTTCAGGGTTGTGT+TGG + Chr4:49209162-49209181 MsG0480020825.01.T01:exon 40.0%
CTATCTTGTAGGTGTAGTAG+TGG + Chr4:49206759-49206778 MsG0480020825.01.T01:intron 40.0%
CTGAGCTAACTAGCTCAAAA+GGG - Chr4:49209248-49209267 None:intergenic 40.0%
CTTCATTAACCACTGTTGAG+GGG - Chr4:49204444-49204463 None:intergenic 40.0%
GAAAATGGAGAGCTGAGATT+GGG + Chr4:49206265-49206284 MsG0480020825.01.T01:CDS 40.0%
GAAATGTCTTTAAGCTCTCC+AGG + Chr4:49208693-49208712 MsG0480020825.01.T01:intron 40.0%
GAAGAATGCATTGTGCCTTA+AGG + Chr4:49203502-49203521 MsG0480020825.01.T01:CDS 40.0%
GAAGACAGAGACAATTGCAT+AGG - Chr4:49203110-49203129 None:intergenic 40.0%
GAAGTGGAGAAGATGACATT+TGG + Chr4:49209025-49209044 MsG0480020825.01.T01:CDS 40.0%
GAATGACATAATGGTTGTGG+GGG + Chr4:49208449-49208468 MsG0480020825.01.T01:CDS 40.0%
GAGAAACTATTTGGCATGGA+AGG + Chr4:49208375-49208394 MsG0480020825.01.T01:CDS 40.0%
GAGATGTGAAAGTTAACGAG+TGG + Chr4:49204689-49204708 MsG0480020825.01.T01:intron 40.0%
GATGGCCTAAATCAAAATGG+AGG + Chr4:49206817-49206836 MsG0480020825.01.T01:CDS 40.0%
GATTCAGGAAGACCATTTCT+AGG - Chr4:49206310-49206329 None:intergenic 40.0%
GCTTTGTCAATATCTCCGTA+AGG - Chr4:49207867-49207886 None:intergenic 40.0%
GGAATTAGAAGGAGATGATG+AGG + Chr4:49204890-49204909 MsG0480020825.01.T01:CDS 40.0%
GGTCTTCCTGAATCAATTGT+CGG + Chr4:49206316-49206335 MsG0480020825.01.T01:CDS 40.0%
GTTTCTGCTTCTGCTTCATT+AGG + Chr4:49208041-49208060 MsG0480020825.01.T01:CDS 40.0%
TAAATTTGTCAGGTCAGCCA+AGG + Chr4:49205713-49205732 MsG0480020825.01.T01:intron 40.0%
TACTCATAGCTGTTTGGATC+AGG + Chr4:49209066-49209085 MsG0480020825.01.T01:CDS 40.0%
TAGGATTCATACCAGTGATG+AGG - Chr4:49207222-49207241 None:intergenic 40.0%
TATGGAGGGAAAAGAAGTTG+AGG + Chr4:49204869-49204888 MsG0480020825.01.T01:CDS 40.0%
TCCTAAGAAAGGAAATGCTG+TGG + Chr4:49203661-49203680 MsG0480020825.01.T01:CDS 40.0%
TGAAAATGGAGAGCTGAGAT+TGG + Chr4:49206264-49206283 MsG0480020825.01.T01:CDS 40.0%
TGAATGTCACGTACCAAACT+AGG + Chr4:49206021-49206040 MsG0480020825.01.T01:intron 40.0%
TGACTTTGTAGGGGTGAAAA+TGG + Chr4:49206250-49206269 MsG0480020825.01.T01:intron 40.0%
TGATTTCAACATCGGAGCTT+GGG + Chr4:49207809-49207828 MsG0480020825.01.T01:CDS 40.0%
TGCAGATTGAAAACTAGGCT+TGG - Chr4:49207838-49207857 None:intergenic 40.0%
TGCTTATAATAGTGACCGGA+GGG + Chr4:49204384-49204403 MsG0480020825.01.T01:intron 40.0%
TGGATGAATCACCAGAAAGA+AGG + Chr4:49206662-49206681 MsG0480020825.01.T01:CDS 40.0%
TGGGGAAGATTGAATGCTTA+GGG - Chr4:49207152-49207171 None:intergenic 40.0%
TGTGGCTGAAGATCATAGTT+TGG - Chr4:49203752-49203771 None:intergenic 40.0%
TTAGTGCGATAAGGCTTAGT+TGG + Chr4:49208854-49208873 MsG0480020825.01.T01:intron 40.0%
TTCTGCTTCATTAGGGGATA+CGG + Chr4:49208049-49208068 MsG0480020825.01.T01:CDS 40.0%
TTCTGCTTCTGCTTCATTAG+GGG + Chr4:49208043-49208062 MsG0480020825.01.T01:CDS 40.0%
TTGCTTATAATAGTGACCGG+AGG + Chr4:49204383-49204402 MsG0480020825.01.T01:intron 40.0%
TTGGGGAAGATTGAATGCTT+AGG - Chr4:49207153-49207172 None:intergenic 40.0%
!! ATCAAAATGGAGGTGCTTGA+TGG + Chr4:49206827-49206846 MsG0480020825.01.T01:CDS 40.0%
!! CATGACTTGCTCTGTAACAT+GGG - Chr4:49206555-49206574 None:intergenic 40.0%
!! GAGAAGTGTTTGTGCTTCAT+AGG - Chr4:49203852-49203871 None:intergenic 40.0%
!! TAAGTGCTAGTCTTGGAAGT+TGG + Chr4:49209318-49209337 MsG0480020825.01.T01:three_prime_UTR 40.0%
!! TTGCAGTGAGTTTTGTGATG+TGG + Chr4:49208973-49208992 MsG0480020825.01.T01:intron 40.0%
!!! GGCTGGTTTTGTCATAGAAA+TGG + Chr4:49208879-49208898 MsG0480020825.01.T01:intron 40.0%
!!! TTTTGGCTTTTCAGTTGGCA+GGG + Chr4:49204841-49204860 MsG0480020825.01.T01:intron 40.0%
AAAAAACCAACCTCAGCCTG+AGG - Chr4:49204117-49204136 None:intergenic 45.0%
AAAGGAGTTGCACAAAGGTG+AGG + Chr4:49208183-49208202 MsG0480020825.01.T01:intron 45.0%
AAAGTTAACGAGTGGAGTGG+CGG + Chr4:49204697-49204716 MsG0480020825.01.T01:intron 45.0%
AACCTGGCATCAACTGGAAT+AGG + Chr4:49207654-49207673 MsG0480020825.01.T01:CDS 45.0%
AACCTTGTCCCTATACTCAC+TGG - Chr4:49206625-49206644 None:intergenic 45.0%
AACTTTCCAAGGGTCTTGCA+AGG + Chr4:49207747-49207766 MsG0480020825.01.T01:CDS 45.0%
AAGGAGTTGCACAAAGGTGA+GGG + Chr4:49208184-49208203 MsG0480020825.01.T01:intron 45.0%
AATTAGACTTGTCCCGGTGT+CGG + Chr4:49203873-49203892 MsG0480020825.01.T01:intron 45.0%
ACAACCCTGCAAAAGATCTG+TGG - Chr4:49203770-49203789 None:intergenic 45.0%
ACAAGTTACTCTGCTACCTC+AGG + Chr4:49204098-49204117 MsG0480020825.01.T01:CDS 45.0%
ACTAAGCAGAGTTGACCACA+TGG - Chr4:49208839-49208858 None:intergenic 45.0%
AGATCACCAAAGGTCTTGCA+AGG + Chr4:49207537-49207556 MsG0480020825.01.T01:CDS 45.0%
AGCAGGAATCAGTGGAATGA+TGG + Chr4:49207497-49207516 MsG0480020825.01.T01:intron 45.0%
AGTGTCTTGCAGAACATGTG+AGG - Chr4:49204945-49204964 None:intergenic 45.0%
ATAAGGCTTAGTTGGTTGGC+TGG + Chr4:49208862-49208881 MsG0480020825.01.T01:intron 45.0%
ATAATCTGGCTGACCAACTG+AGG - Chr4:49209122-49209141 None:intergenic 45.0%
ATCCAGTGAGTATAGGGACA+AGG + Chr4:49206620-49206639 MsG0480020825.01.T01:CDS 45.0%
ATGACATCGTTCGATCCATG+TGG + Chr4:49208821-49208840 MsG0480020825.01.T01:intron 45.0%
ATTAACGATCCCCTCAACAG+TGG + Chr4:49204432-49204451 MsG0480020825.01.T01:intron 45.0%
CAACCTATGAAGCACGGATA+CGG - Chr4:49203991-49204010 None:intergenic 45.0%
CAACTCTGCTTAGTGCGATA+AGG + Chr4:49208845-49208864 MsG0480020825.01.T01:intron 45.0%
CACAAGCAAGGAAGCTTAGT+TGG + Chr4:49208297-49208316 MsG0480020825.01.T01:CDS 45.0%
CATACCAGTGATGAGGTGAT+TGG - Chr4:49207215-49207234 None:intergenic 45.0%
CATCAAAACCTGGCATCAAC+TGG + Chr4:49207648-49207667 MsG0480020825.01.T01:CDS 45.0%
CCAACTGAGGAAGACTTTGA+AGG - Chr4:49209109-49209128 None:intergenic 45.0%
CCTTCAAAGTCTTCCTCAGT+TGG + Chr4:49209106-49209125 MsG0480020825.01.T01:CDS 45.0%
CTATTCGGCTTTCCTTTGTC+TGG + Chr4:49208125-49208144 MsG0480020825.01.T01:CDS 45.0%
CTGATTTCAACATCGGAGCT+TGG + Chr4:49207808-49207827 MsG0480020825.01.T01:CDS 45.0%
GAAGAAAGATCGATCTCCCA+TGG - Chr4:49207118-49207137 None:intergenic 45.0%
GAAGATTGAATGCTTAGGGG+AGG - Chr4:49207148-49207167 None:intergenic 45.0%
GAGATTCTGATAAGGGATGG+AGG + Chr4:49208406-49208425 MsG0480020825.01.T01:CDS 45.0%
GATTTCAACATCGGAGCTTG+GGG + Chr4:49207810-49207829 MsG0480020825.01.T01:CDS 45.0%
GCAGGAATCAGTGGAATGAT+GGG + Chr4:49207498-49207517 MsG0480020825.01.T01:intron 45.0%
GCTGAGCTAACTAGCTCAAA+AGG - Chr4:49209249-49209268 None:intergenic 45.0%
GGAGTCAGTAAGATCACCAA+AGG + Chr4:49207527-49207546 MsG0480020825.01.T01:CDS 45.0%
GGCAAAAAGGAGTTGCACAA+AGG + Chr4:49208178-49208197 MsG0480020825.01.T01:CDS 45.0%
GGGGAAGATTGAATGCTTAG+GGG - Chr4:49207151-49207170 None:intergenic 45.0%
GTGAAAGTTAACGAGTGGAG+TGG + Chr4:49204694-49204713 MsG0480020825.01.T01:intron 45.0%
GTGATGCAGTGCTCTTTCTA+AGG + Chr4:49205794-49205813 MsG0480020825.01.T01:CDS 45.0%
GTGTCTTGCAGAACATGTGA+GGG - Chr4:49204944-49204963 None:intergenic 45.0%
GTTTAACACGCCATCGATAG+TGG + Chr4:49207944-49207963 MsG0480020825.01.T01:CDS 45.0%
TCTTGACCTTGCAAGACCTT+TGG - Chr4:49207546-49207565 None:intergenic 45.0%
TGCGATAAGGCTTAGTTGGT+TGG + Chr4:49208858-49208877 MsG0480020825.01.T01:intron 45.0%
TGTCTTGCAGAACATGTGAG+GGG - Chr4:49204943-49204962 None:intergenic 45.0%
TTGGCAACAAGCTCTTGAGA+GGG - Chr4:49205577-49205596 None:intergenic 45.0%
TTTATGGCAGCAGGAATCAG+TGG + Chr4:49207489-49207508 MsG0480020825.01.T01:intron 45.0%
TTTGGCAACAAGCTCTTGAG+AGG - Chr4:49205578-49205597 None:intergenic 45.0%
! ACTTCCCCGGTCAACTTTTT+AGG + Chr4:49204278-49204297 MsG0480020825.01.T01:intron 45.0%
! AGGAAAGCCGAATAGTTTGC+AGG - Chr4:49208120-49208139 None:intergenic 45.0%
! ATTGACCTCTCTAGGTTGAG+CGG + Chr4:49208327-49208346 MsG0480020825.01.T01:CDS 45.0%
! GAAAAAAGGGTGTGACCAAG+TGG - Chr4:49203359-49203378 None:intergenic 45.0%
! GAAGTGCTCAACTCAAAACC+TGG - Chr4:49207621-49207640 None:intergenic 45.0%
! GCTGTGGTGTATTTTCCACA+AGG + Chr4:49203677-49203696 MsG0480020825.01.T01:CDS 45.0%
! TCAGCCACAGATCTTTTGCA+GGG + Chr4:49203763-49203782 MsG0480020825.01.T01:CDS 45.0%
! TTCAGCCACAGATCTTTTGC+AGG + Chr4:49203762-49203781 MsG0480020825.01.T01:CDS 45.0%
! TTCCTATTCCAGTTGATGCC+AGG - Chr4:49207659-49207678 None:intergenic 45.0%
!! ATATCCTAGAAGTGCCCTCT+CGG + Chr4:49205850-49205869 MsG0480020825.01.T01:intron 45.0%
!! GAATGTGTTTGGTTTGGGGT+TGG + Chr4:49209445-49209464 MsG0480020825.01.T01:three_prime_UTR 45.0%
!! GCATGACTTGCTCTGTAACA+TGG - Chr4:49206556-49206575 None:intergenic 45.0%
!! TATATGTGTCGGTGTCGTGT+CGG - Chr4:49203918-49203937 None:intergenic 45.0%
!!! GTTTTGGCTTTTCAGTTGGC+AGG + Chr4:49204840-49204859 MsG0480020825.01.T01:intron 45.0%
AGTGATGAGGTGATTGGGTG+AGG - Chr4:49207209-49207228 None:intergenic 50.0%
ATGTTCCCTGCCACTATCGA+TGG - Chr4:49207957-49207976 None:intergenic 50.0%
ATTTCCACTCCACACCATGC+AGG - Chr4:49205603-49205622 None:intergenic 50.0%
ATTTGTCAGGTCAGCCAAGG+CGG + Chr4:49205716-49205735 MsG0480020825.01.T01:intron 50.0%
CAACTCAAAACCTGGCTGGT+TGG - Chr4:49207613-49207632 None:intergenic 50.0%
CAATCTTCAGCAGCTCTACG+AGG - Chr4:49205008-49205027 None:intergenic 50.0%
CCTGCAGCTTATGCTCATCT+GGG - Chr4:49208016-49208035 None:intergenic 50.0%
CTTGTTGCCAAAGACCTGCA+TGG + Chr4:49205586-49205605 MsG0480020825.01.T01:CDS 50.0%
GAACTATGGCATGCTTGTGC+TGG + Chr4:49203623-49203642 MsG0480020825.01.T01:CDS 50.0%
GAAGAGCCATTGACCTCTCT+AGG + Chr4:49208319-49208338 MsG0480020825.01.T01:CDS 50.0%
GAAGGAGATGATGAGGGAGA+TGG + Chr4:49204897-49204916 MsG0480020825.01.T01:CDS 50.0%
GACAAAGTAACCAACCAGCC+AGG + Chr4:49207600-49207619 MsG0480020825.01.T01:CDS 50.0%
GAGATGATGAGGGAGATGGA+GGG + Chr4:49204901-49204920 MsG0480020825.01.T01:CDS 50.0%
GCTCAACCTAGAGAGGTCAA+TGG - Chr4:49208328-49208347 None:intergenic 50.0%
GGCCAACAAGGAGAATGATG+AGG + Chr4:49204068-49204087 MsG0480020825.01.T01:intron 50.0%
GTCTCTGATACGAGCACTCA+TGG + Chr4:49204969-49204988 MsG0480020825.01.T01:CDS 50.0%
TACCTTCTCCAGACCTCACT+TGG + Chr4:49205900-49205919 MsG0480020825.01.T01:intron 50.0%
TCACCCAATCACCTCATCAC+TGG + Chr4:49207208-49207227 MsG0480020825.01.T01:CDS 50.0%
TCAGTTGGCAGGGATGCATA+TGG + Chr4:49204851-49204870 MsG0480020825.01.T01:intron 50.0%
TCCTGCAGCTTATGCTCATC+TGG - Chr4:49208017-49208036 None:intergenic 50.0%
TCTGATACGAGCACTCATGG+TGG + Chr4:49204972-49204991 MsG0480020825.01.T01:CDS 50.0%
TCTTGACCTTGCAAGACCCT+TGG - Chr4:49207756-49207775 None:intergenic 50.0%
TGCTCAACTCAAAACCTGGC+TGG - Chr4:49207617-49207636 None:intergenic 50.0%
TGTCCGTATCCGTGCTTCAT+AGG + Chr4:49203985-49204004 MsG0480020825.01.T01:intron 50.0%
TTGGCAGGGATGCATATGGA+GGG + Chr4:49204855-49204874 MsG0480020825.01.T01:CDS 50.0%
TTTCCTTTGTCTGGCGAACC+TGG + Chr4:49208134-49208153 MsG0480020825.01.T01:CDS 50.0%
! ATCAAGACCGAGTATCGCCA+TGG + Chr4:49207098-49207117 MsG0480020825.01.T01:CDS 50.0%
! TCAAGACCGAGTATCGCCAT+GGG + Chr4:49207099-49207118 MsG0480020825.01.T01:CDS 50.0%
! TGTCGTGTCGGTATCTGACA+CGG - Chr4:49203906-49203925 None:intergenic 50.0%
!! CAGTGGAATGATGGGCTTTG+AGG + Chr4:49207506-49207525 MsG0480020825.01.T01:CDS 50.0%
AAGACCTGCATGGTGTGGAG+TGG + Chr4:49205596-49205615 MsG0480020825.01.T01:CDS 55.0%
AAGTGCCCTCTCGGCTTACA+GGG + Chr4:49205859-49205878 MsG0480020825.01.T01:intron 55.0%
AGGCGGCATCTACTCACAAC+TGG + Chr4:49205733-49205752 MsG0480020825.01.T01:CDS 55.0%
CACCAAGTGAGGTCTGGAGA+AGG - Chr4:49205905-49205924 None:intergenic 55.0%
CCCAGATGAGCATAAGCTGC+AGG + Chr4:49208013-49208032 MsG0480020825.01.T01:CDS 55.0%
CGATCTCCCATGGCGATACT+CGG - Chr4:49207108-49207127 None:intergenic 55.0%
CTACCAGGTTCGCCAGACAA+AGG - Chr4:49208140-49208159 None:intergenic 55.0%
CTCCACACCATGCAGGTCTT+TGG - Chr4:49205596-49205615 None:intergenic 55.0%
CTTCTCCAGACCTCACTTGG+TGG + Chr4:49205903-49205922 MsG0480020825.01.T01:intron 55.0%
GCAGCTTATGCTCATCTGGG+AGG - Chr4:49208013-49208032 None:intergenic 55.0%
GGAGATGATGAGGGAGATGG+AGG + Chr4:49204900-49204919 MsG0480020825.01.T01:CDS 55.0%
GGCATCTACTCACAACTGGC+TGG + Chr4:49205737-49205756 MsG0480020825.01.T01:CDS 55.0%
GGGTGAGGTAACCAGTAGAC+CGG - Chr4:49207194-49207213 None:intergenic 55.0%
GTTGGCAGGGATGCATATGG+AGG + Chr4:49204854-49204873 MsG0480020825.01.T01:intron 55.0%
GTTGTGAGTAGATGCCGCCT+TGG - Chr4:49205733-49205752 None:intergenic 55.0%
TACTCTGCTACCTCAGGCTG+AGG + Chr4:49204104-49204123 MsG0480020825.01.T01:CDS 55.0%
TCCGCGGTTGCTTCAGTCTT+GGG - Chr4:49207171-49207190 None:intergenic 55.0%
TGAATGCTTAGGGGAGGCTG+AGG - Chr4:49207142-49207161 None:intergenic 55.0%
TGCCAAAGACCTGCATGGTG+TGG + Chr4:49205591-49205610 MsG0480020825.01.T01:CDS 55.0%
TGGTTGTGGGGGATGATCCA+TGG + Chr4:49208460-49208479 MsG0480020825.01.T01:CDS 55.0%
TGTAGCCGCTCAACCTAGAG+AGG - Chr4:49208335-49208354 None:intergenic 55.0%
! AACACGCCATCGATAGTGGC+AGG + Chr4:49207948-49207967 MsG0480020825.01.T01:CDS 55.0%
! ACACGCCATCGATAGTGGCA+GGG + Chr4:49207949-49207968 MsG0480020825.01.T01:CDS 55.0%
! TTAACGAGTGGAGTGGCGGA+GGG + Chr4:49204701-49204720 MsG0480020825.01.T01:intron 55.0%
!! TAAGCCGAGAGGGCACTTCT+AGG - Chr4:49205857-49205876 None:intergenic 55.0%
AGACTGAAGCAACCGCGGAC+CGG + Chr4:49207172-49207191 MsG0480020825.01.T01:CDS 60.0%
AGTGCCCTCTCGGCTTACAG+GGG + Chr4:49205860-49205879 MsG0480020825.01.T01:intron 60.0%
CCCCAAGACTGAAGCAACCG+CGG + Chr4:49207167-49207186 MsG0480020825.01.T01:CDS 60.0%
CCGCGGTTGCTTCAGTCTTG+GGG - Chr4:49207170-49207189 None:intergenic 60.0%
CTGCTACCTCAGGCTGAGGT+TGG + Chr4:49204108-49204127 MsG0480020825.01.T01:intron 60.0%
GGCTTCCACCAAGTGAGGTC+TGG - Chr4:49205911-49205930 None:intergenic 60.0%
GTAACCAGTAGACCGGTCCG+CGG - Chr4:49207187-49207206 None:intergenic 60.0%
GTAACGCAGTCTAGTGCGCG+AGG - Chr4:49205932-49205951 None:intergenic 60.0%
GTCCGCGGTTGCTTCAGTCT+TGG - Chr4:49207172-49207191 None:intergenic 60.0%
GTTAACGAGTGGAGTGGCGG+AGG + Chr4:49204700-49204719 MsG0480020825.01.T01:intron 60.0%
TTGCCCCCTGTAAGCCGAGA+GGG - Chr4:49205867-49205886 None:intergenic 60.0%
! GAAGTGCCCTCTCGGCTTAC+AGG + Chr4:49205858-49205877 MsG0480020825.01.T01:intron 60.0%
ACACGGCACGTGTCCGACAC+CGG - Chr4:49203889-49203908 None:intergenic 65.0%
CGCGAGGCTTCCACCAAGTG+AGG - Chr4:49205916-49205935 None:intergenic 65.0%
CTTGCCCCCTGTAAGCCGAG+AGG - Chr4:49205868-49205887 None:intergenic 65.0%
GTGCCCTCTCGGCTTACAGG+GGG + Chr4:49205861-49205880 MsG0480020825.01.T01:intron 65.0%
CACGGCACGTGTCCGACACC+GGG - Chr4:49203888-49203907 None:intergenic 70.0%
GCAACCGCGGACCGGTCTAC+TGG + Chr4:49207180-49207199 MsG0480020825.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 49203073 49209464 49203073 ID=MsG0480020825.01;Name=MsG0480020825.01
Chr4 mRNA 49203073 49209464 49203073 ID=MsG0480020825.01.T01;Parent=MsG0480020825.01;Name=MsG0480020825.01.T01;_AED=0.27;_eAED=0.27;_QI=391|0.81|0.83|1|0.81|0.83|12|299|803
Chr4 exon 49203073 49203805 49203073 ID=MsG0480020825.01.T01:exon:17697;Parent=MsG0480020825.01.T01
Chr4 exon 49204069 49204125 49204069 ID=MsG0480020825.01.T01:exon:17698;Parent=MsG0480020825.01.T01
Chr4 exon 49204855 49205040 49204855 ID=MsG0480020825.01.T01:exon:17699;Parent=MsG0480020825.01.T01
Chr4 exon 49205556 49205640 49205556 ID=MsG0480020825.01.T01:exon:17700;Parent=MsG0480020825.01.T01
Chr4 exon 49205725 49205821 49205725 ID=MsG0480020825.01.T01:exon:17701;Parent=MsG0480020825.01.T01
Chr4 exon 49206261 49206425 49206261 ID=MsG0480020825.01.T01:exon:17702;Parent=MsG0480020825.01.T01
Chr4 exon 49206564 49206683 49206564 ID=MsG0480020825.01.T01:exon:17703;Parent=MsG0480020825.01.T01
Chr4 exon 49206770 49206848 49206770 ID=MsG0480020825.01.T01:exon:17704;Parent=MsG0480020825.01.T01
Chr4 exon 49207067 49207271 49207067 ID=MsG0480020825.01.T01:exon:17705;Parent=MsG0480020825.01.T01
Chr4 exon 49207502 49208199 49207502 ID=MsG0480020825.01.T01:exon:17706;Parent=MsG0480020825.01.T01
Chr4 exon 49208294 49208484 49208294 ID=MsG0480020825.01.T01:exon:17707;Parent=MsG0480020825.01.T01
Chr4 exon 49208979 49209464 49208979 ID=MsG0480020825.01.T01:exon:17708;Parent=MsG0480020825.01.T01
Chr4 five_prime_UTR 49203073 49203463 49203073 ID=MsG0480020825.01.T01:five_prime_utr;Parent=MsG0480020825.01.T01
Chr4 CDS 49203464 49203805 49203464 ID=MsG0480020825.01.T01:cds;Parent=MsG0480020825.01.T01
Chr4 CDS 49204069 49204125 49204069 ID=MsG0480020825.01.T01:cds;Parent=MsG0480020825.01.T01
Chr4 CDS 49204855 49205040 49204855 ID=MsG0480020825.01.T01:cds;Parent=MsG0480020825.01.T01
Chr4 CDS 49205556 49205640 49205556 ID=MsG0480020825.01.T01:cds;Parent=MsG0480020825.01.T01
Chr4 CDS 49205725 49205821 49205725 ID=MsG0480020825.01.T01:cds;Parent=MsG0480020825.01.T01
Chr4 CDS 49206261 49206425 49206261 ID=MsG0480020825.01.T01:cds;Parent=MsG0480020825.01.T01
Chr4 CDS 49206564 49206683 49206564 ID=MsG0480020825.01.T01:cds;Parent=MsG0480020825.01.T01
Chr4 CDS 49206770 49206848 49206770 ID=MsG0480020825.01.T01:cds;Parent=MsG0480020825.01.T01
Chr4 CDS 49207067 49207271 49207067 ID=MsG0480020825.01.T01:cds;Parent=MsG0480020825.01.T01
Chr4 CDS 49207502 49208199 49207502 ID=MsG0480020825.01.T01:cds;Parent=MsG0480020825.01.T01
Chr4 CDS 49208294 49208484 49208294 ID=MsG0480020825.01.T01:cds;Parent=MsG0480020825.01.T01
Chr4 CDS 49208979 49209165 49208979 ID=MsG0480020825.01.T01:cds;Parent=MsG0480020825.01.T01
Chr4 three_prime_UTR 49209166 49209464 49209166 ID=MsG0480020825.01.T01:three_prime_utr;Parent=MsG0480020825.01.T01
Gene Sequence

>MsG0480020825.01.T01

ATGGAAATTGATCTAAACAATGAAGTGATTGAGGTTGAGAAGAATGCATTGTGCCTTAAGGAATGTGAAAAAGGTTTTTGTTTCTGTGTTTCTTGTTTGTCTCCTTCAACTTGTTCATCTTCAAGTTCAACTTCACCACTTGTTTCTTCTTCTTATCTTGAACTATGGCATGCTTGTGCTGGCCCTCTTACTTCACTTCCTAAGAAAGGAAATGCTGTGGTGTATTTTCCACAAGGTCACTTAGAACAATTTGCTTCTTTTTCTCCTTTTAAACAATTGGAGATACCAAACTATGATCTTCAGCCACAGATCTTTTGCAGGGTTGTCAATGTCCAGCTACTTGCCAACAAGGAGAATGATGAGGTTTATACACAAGTTACTCTGCTACCTCAGGCTGAGTTGGCAGGGATGCATATGGAGGGAAAAGAAGTTGAGGAATTAGAAGGAGATGATGAGGGAGATGGAGGGTCACTTACAAAATCAACCCCTCACATGTTCTGCAAGACACTAACTGTCTCTGATACGAGCACTCATGGTGGATTCTCTGTGCCTCGTAGAGCTGCTGAAGATTGTTTTCCTCCTTTGGATTATAAGCTGCAGAGACCCTCTCAAGAGCTTGTTGCCAAAGACCTGCATGGTGTGGAGTGGAAATTTCGCCATATTTATAGAGGTCAGCCAAGGCGGCATCTACTCACAACTGGCTGGAGCATTTTTGTGAACCAAAAGAATCTTGTTTCTGGTGATGCAGTGCTCTTTCTAAGGTATGTGGGTGAAAATGGAGAGCTGAGATTGGGAATCAGAAGAGCAGTTAGACCTAGAAATGGTCTTCCTGAATCAATTGTCGGTAATCAGAATTGTTATCCCAATTTCCTTTCATCTGTTGCAAATGCTATATCCACCAAAAGCATGTTTCATGTTTTCTATAGTCCAAGAGCAAGTCATGCAGAGTTTGTTGTTCCGTACCAAAAATATGTTAAAAGCATCAAGAATCCAGTGAGTATAGGGACAAGGTTCAAAATGAGAATTGAAATGGATGAATCACCAGAAAGAAGGTGTAGTAGTGGTATGTTGATTGGAATAAATGATTTGGATCCCTATAGATGGCCTAAATCAAAATGGAGGTGCTTGATGGTAAGATGGGATGAGGATACTGAGACTAATCATCAAGACCGAGTATCGCCATGGGAGATCGATCTTTCTTCTCCTCAGCCTCCCCTAAGCATTCAATCTTCCCCAAGACTGAAGCAACCGCGGACCGGTCTACTGGTTACCTCACCCAATCACCTCATCACTGGTATGAATCCTAATGGTGAGATGGTATGCTTACTTCTGCTTAGAATCAGTGGAATGATGGGCTTTGAGGAGTCAGTAAGATCACCAAAGGTCTTGCAAGGTCAAGAAAATACAGGTTTTATGTCACTATACTATGGATGTGACAAAGTAACCAACCAGCCAGGTTTTGAGTTGAGCACTTCAAGTCATCATCAAAACCTGGCATCAACTGGAATAGGAAAAGTAGTTACATCCTCTGAGCTTATGAGTGTTAATCCTTTCAGTTATGCAGGCTTTATGGAAAGTAACAACTTTCCAAGGGTCTTGCAAGGTCAAGAAATATGTAAACTGAAATCCCTTTCAGGAAAAGCTGATTTCAACATCGGAGCTTGGGGAACCAAGCCTAGTTTTCAATCTGCATGTTTTCCTTACGGAGATATTGACAAAGCTAATCAAGCTAATATTTTTAGCTCAAAACACACCAATTTCATGAGTGATAATGTGCCGTTTAACACGCCATCGATAGTGGCAGGGAACATTAGAAAAGAAGTTGGAAGATCTGGATCTAATCTCCTCCCAGATGAGCATAAGCTGCAGGACAATGTTTCTGCTTCTGCTTCATTAGGGGATACGGATATAAATGCTCCAAATGATAAAAATGTCAAGGGAAAGGCAAATTCCTGCAAACTATTCGGCTTTCCTTTGTCTGGCGAACCTGGTAGCCAAAATTTACAGAACACGGCAAAAAGGAGTTGCACAAAGGTTCACAAGCAAGGAAGCTTAGTTGGAAGAGCCATTGACCTCTCTAGGTTGAGCGGCTACAATGATCTTCTGAGTGAACTGGAGAAACTATTTGGCATGGAAGGACTTCTTAGAGATTCTGATAAGGGATGGAGGATCCTTTACACTGACAGTGAGAATGACATAATGGTTGTGGGGGATGATCCATGGCATGAGTTTTGTGATGTGGTGTCTAAAATCCATATATATACCAAAGAAGAAGTGGAGAAGATGACATTTGGGATGATGACCAATGATGATACTCATAGCTGTTTGGATCAGGCACCAGTTATTATTGAACCTTCAAAGTCTTCCTCAGTTGGTCAGCCAGATTATTCTCCAACAGTAGTTAGAGTCTAA
Protein sequence

>MsG0480020825.01.T01

MEIDLNNEVIEVEKNALCLKECEKGFCFCVSCLSPSTCSSSSSTSPLVSSSYLELWHACAGPLTSLPKKGNAVVYFPQGHLEQFASFSPFKQLEIPNYDLQPQIFCRVVNVQLLANKENDEVYTQVTLLPQAELAGMHMEGKEVEELEGDDEGDGGSLTKSTPHMFCKTLTVSDTSTHGGFSVPRRAAEDCFPPLDYKLQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVNQKNLVSGDAVLFLRYVGENGELRLGIRRAVRPRNGLPESIVGNQNCYPNFLSSVANAISTKSMFHVFYSPRASHAEFVVPYQKYVKSIKNPVSIGTRFKMRIEMDESPERRCSSGMLIGINDLDPYRWPKSKWRCLMVRWDEDTETNHQDRVSPWEIDLSSPQPPLSIQSSPRLKQPRTGLLVTSPNHLITGMNPNGEMVCLLLLRISGMMGFEESVRSPKVLQGQENTGFMSLYYGCDKVTNQPGFELSTSSHHQNLASTGIGKVVTSSELMSVNPFSYAGFMESNNFPRVLQGQEICKLKSLSGKADFNIGAWGTKPSFQSACFPYGDIDKANQANIFSSKHTNFMSDNVPFNTPSIVAGNIRKEVGRSGSNLLPDEHKLQDNVSASASLGDTDINAPNDKNVKGKANSCKLFGFPLSGEPGSQNLQNTAKRSCTKVHKQGSLVGRAIDLSRLSGYNDLLSELEKLFGMEGLLRDSDKGWRILYTDSENDIMVVGDDPWHEFCDVVSKIHIYTKEEVEKMTFGMMTNDDTHSCLDQAPVIIEPSKSSSVGQPDYSPTVVRV*