Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019221.01.T01 | XP_013455085.1 | 95.259 | 232 | 0 | 1 | 1 | 232 | 1 | 221 | 8.37E-162 | 456 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019221.01.T01 | O22152 | 67.265 | 223 | 52 | 7 | 19 | 232 | 19 | 229 | 6.01E-92 | 272 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019221.01.T01 | A0A072UJ49 | 95.259 | 232 | 0 | 1 | 1 | 232 | 1 | 221 | 4.00e-162 | 456 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0480019221.01.T01 | TF | C2C2-YABBY |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047899.01 | MsG0480019221.01 | 0.906061 | 2.217643e-80 | 3.693052e-76 |
| MsG0080048876.01 | MsG0480019221.01 | 0.816097 | 6.592870e-52 | 4.628430e-49 |
| MsG0080049040.01 | MsG0480019221.01 | 0.830968 | 2.178245e-55 | 2.331062e-52 |
| MsG0080049068.01 | MsG0480019221.01 | 0.831067 | 2.059796e-55 | 2.210773e-52 |
| MsG0180000292.01 | MsG0480019221.01 | 0.816397 | 5.646928e-52 | 3.996869e-49 |
| MsG0180000404.01 | MsG0480019221.01 | 0.807834 | 4.165760e-50 | 2.344249e-47 |
| MsG0180001085.01 | MsG0480019221.01 | 0.825336 | 4.954553e-54 | 4.503075e-51 |
| MsG0180001270.01 | MsG0480019221.01 | 0.829271 | 5.650547e-55 | 5.755807e-52 |
| MsG0180004115.01 | MsG0480019221.01 | 0.837907 | 3.940119e-57 | 5.192486e-54 |
| MsG0180004192.01 | MsG0480019221.01 | 0.815839 | 7.527315e-52 | 5.246771e-49 |
| MsG0180004276.01 | MsG0480019221.01 | 0.833567 | 4.953083e-56 | 5.726096e-53 |
| MsG0180004735.01 | MsG0480019221.01 | 0.800277 | 1.554373e-48 | 7.208157e-46 |
| MsG0180005485.01 | MsG0480019221.01 | 0.802861 | 4.589008e-49 | 2.272273e-46 |
| MsG0180005755.01 | MsG0480019221.01 | 0.802417 | 5.665430e-49 | 2.773868e-46 |
| MsG0180005961.01 | MsG0480019221.01 | 0.826099 | 3.266485e-54 | 3.033914e-51 |
| MsG0480018644.01 | MsG0480019221.01 | 0.823454 | 1.373234e-53 | 1.182883e-50 |
| MsG0480019221.01 | MsG0480019340.01 | 0.848156 | 7.335918e-60 | 1.333832e-56 |
| MsG0480019221.01 | MsG0480019751.01 | 0.804996 | 1.651766e-49 | 8.640094e-47 |
| MsG0480019221.01 | MsG0480020315.01 | 0.865135 | 7.352461e-65 | 2.366523e-61 |
| MsG0480019221.01 | MsG0480020517.01 | 0.882329 | 1.141744e-70 | 6.926487e-67 |
| MsG0480019221.01 | MsG0480020690.01 | 0.834224 | 3.392155e-56 | 3.999522e-53 |
| MsG0480019221.01 | MsG0480020783.01 | 0.824179 | 9.284306e-54 | 8.163213e-51 |
| MsG0480019221.01 | MsG0480021803.01 | 0.813782 | 2.150648e-51 | 1.417573e-48 |
| MsG0480019221.01 | MsG0480023054.01 | 0.817276 | 3.587239e-52 | 2.600691e-49 |
| MsG0480019221.01 | MsG0480023314.01 | 0.834490 | 2.907994e-56 | 3.456531e-53 |
| MsG0480019221.01 | MsG0480023569.01 | 0.818079 | 2.363646e-52 | 1.751736e-49 |
| MsG0480019221.01 | MsG0480023590.01 | 0.806147 | 9.472015e-50 | 5.103184e-47 |
| MsG0480019221.01 | MsG0480023661.01 | 0.852878 | 3.457077e-61 | 7.329238e-58 |
| MsG0480019221.01 | MsG0580024873.01 | 0.817129 | 3.869768e-52 | 2.794377e-49 |
| MsG0480019221.01 | MsG0580025449.01 | 0.807023 | 6.188369e-50 | 3.409826e-47 |
| MsG0480019221.01 | MsG0580025502.01 | 0.815890 | 7.333197e-52 | 5.118540e-49 |
| MsG0480019221.01 | MsG0580025607.01 | 0.860645 | 1.787607e-63 | 4.921474e-60 |
| MsG0480019221.01 | MsG0580025668.01 | 0.858253 | 9.353595e-63 | 2.372353e-59 |
| MsG0480019221.01 | MsG0580025828.01 | 0.864987 | 8.182757e-65 | 2.620050e-61 |
| MsG0480019221.01 | MsG0580025971.01 | 0.818702 | 1.707397e-52 | 1.287350e-49 |
| MsG0480019221.01 | MsG0580026179.01 | 0.832693 | 8.171969e-56 | 9.203762e-53 |
| MsG0480019221.01 | MsG0580027394.01 | 0.812621 | 3.866264e-51 | 2.470138e-48 |
| MsG0480019221.01 | MsG0580027763.01 | 0.824119 | 9.591907e-54 | 8.418997e-51 |
| MsG0480019221.01 | MsG0580028335.01 | 0.860382 | 2.147751e-63 | 5.859948e-60 |
| MsG0480019221.01 | MsG0680030627.01 | 0.817000 | 4.137672e-52 | 2.977550e-49 |
| MsG0480019221.01 | MsG0680030784.01 | 0.816463 | 5.459570e-52 | 3.870985e-49 |
| MsG0480019221.01 | MsG0680030908.01 | 0.833892 | 4.107067e-56 | 4.795037e-53 |
| MsG0480019221.01 | MsG0680032057.01 | 0.804244 | 2.370880e-49 | 1.216285e-46 |
| MsG0480019221.01 | MsG0680032651.01 | 0.859367 | 4.344366e-63 | 1.144688e-59 |
| MsG0480019221.01 | MsG0680033377.01 | 0.827562 | 1.460980e-54 | 1.415452e-51 |
| MsG0480019221.01 | MsG0680034064.01 | 0.824529 | 7.684548e-54 | 6.824667e-51 |
| MsG0480019221.01 | MsG0680034750.01 | 0.815843 | 7.509577e-52 | 5.234998e-49 |
| MsG0480019221.01 | MsG0780035992.01 | 0.825448 | 4.663249e-54 | 4.251297e-51 |
| MsG0480019221.01 | MsG0780037341.01 | 0.800460 | 1.426741e-48 | 6.646751e-46 |
| MsG0480019221.01 | MsG0780037395.01 | 0.803354 | 3.628307e-49 | 1.819293e-46 |
| MsG0480019221.01 | MsG0780038616.01 | 0.803744 | 3.012122e-49 | 1.525622e-46 |
| MsG0480019221.01 | MsG0780038784.01 | 0.828013 | 1.138076e-54 | 1.117365e-51 |
| MsG0480019221.01 | MsG0780039675.01 | 0.850531 | 1.598845e-60 | 3.141206e-57 |
| MsG0480019221.01 | MsG0780039746.01 | 0.802397 | 5.721533e-49 | 2.799860e-46 |
| MsG0480019221.01 | MsG0780040284.01 | 0.805628 | 1.217971e-49 | 6.475243e-47 |
| MsG0480019221.01 | MsG0780041174.01 | 0.800851 | 1.187213e-48 | 5.586351e-46 |
| MsG0480019221.01 | MsG0780041175.01 | 0.800947 | 1.134456e-48 | 5.351279e-46 |
| MsG0480019221.01 | MsG0780041259.01 | 0.802115 | 6.537780e-49 | 3.176214e-46 |
| MsG0480019221.01 | MsG0780041349.01 | 0.810900 | 9.158641e-51 | 5.589521e-48 |
| MsG0480019221.01 | MsG0780041480.01 | 0.803414 | 3.526856e-49 | 1.771210e-46 |
| MsG0480019221.01 | MsG0880042555.01 | 0.802054 | 6.729922e-49 | 3.264579e-46 |
| MsG0480019221.01 | MsG0880042890.01 | 0.833004 | 6.839217e-56 | 7.775024e-53 |
| MsG0480019221.01 | MsG0880043174.01 | 0.801570 | 8.460028e-49 | 4.053608e-46 |
| MsG0480019221.01 | MsG0880043814.01 | 0.816536 | 5.257424e-52 | 3.735266e-49 |
| MsG0480019221.01 | MsG0880044392.01 | 0.822120 | 2.808068e-53 | 2.328996e-50 |
| MsG0480019221.01 | MsG0880044704.01 | 0.820760 | 5.784848e-53 | 4.618380e-50 |
| MsG0480019221.01 | MsG0880045101.01 | 0.821028 | 5.020539e-53 | 4.038580e-50 |
| MsG0480019221.01 | MsG0880046765.01 | 0.805522 | 1.281966e-49 | 6.796669e-47 |
| MsG0480019221.01 | MsG0880047168.01 | 0.844728 | 6.315906e-59 | 1.029032e-55 |
| MsG0380015399.01 | MsG0480019221.01 | 0.823436 | 1.386623e-53 | 1.193810e-50 |
| MsG0380015603.01 | MsG0480019221.01 | 0.814975 | 1.171472e-51 | 7.975153e-49 |
| MsG0380015693.01 | MsG0480019221.01 | 0.834337 | 3.176662e-56 | 3.758638e-53 |
| MsG0380016192.01 | MsG0480019221.01 | 0.872838 | 2.338331e-67 | 9.928188e-64 |
| MsG0380017087.01 | MsG0480019221.01 | 0.832077 | 1.160950e-55 | 1.283871e-52 |
| MsG0380017088.01 | MsG0480019221.01 | 0.834542 | 2.822495e-56 | 3.360220e-53 |
| MsG0380017336.01 | MsG0480019221.01 | 0.814270 | 1.678056e-51 | 1.120864e-48 |
| MsG0380017703.01 | MsG0480019221.01 | 0.839711 | 1.345900e-57 | 1.874198e-54 |
| MsG0380018069.01 | MsG0480019221.01 | 0.811195 | 7.903549e-51 | 4.861072e-48 |
| MsG0280007075.01 | MsG0480019221.01 | 0.824228 | 9.042659e-54 | 7.961727e-51 |
| MsG0280007750.01 | MsG0480019221.01 | 0.812916 | 3.332057e-51 | 2.145351e-48 |
| MsG0280008388.01 | MsG0480019221.01 | 0.825140 | 5.514716e-54 | 4.984532e-51 |
| MsG0280008394.01 | MsG0480019221.01 | 0.826666 | 2.393269e-54 | 2.259124e-51 |
| MsG0280008451.01 | MsG0480019221.01 | 0.835825 | 1.339473e-56 | 1.657038e-53 |
| MsG0280008591.01 | MsG0480019221.01 | 0.824090 | 9.741940e-54 | 8.543773e-51 |
| MsG0280010353.01 | MsG0480019221.01 | 0.806571 | 7.712156e-50 | 4.200138e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0480019221.01 | MsG0480022313.01 | PPI |
| MsG0480019221.01 | MsG0480020825.01 | PPI |
| MsG0480019221.01 | MsG0280006783.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019221.01.T01 | MTR_4g025900 | 95.259 | 232 | 0 | 1 | 1 | 232 | 1 | 221 | 1.01e-165 | 456 |
| MsG0480019221.01.T01 | MTR_4g101660 | 67.727 | 220 | 52 | 7 | 18 | 232 | 13 | 218 | 1.19e-89 | 263 |
| MsG0480019221.01.T01 | MTR_4g114730 | 50.490 | 204 | 64 | 5 | 20 | 217 | 11 | 183 | 1.15e-56 | 179 |
| MsG0480019221.01.T01 | MTR_2g087740 | 49.275 | 207 | 83 | 6 | 19 | 222 | 8 | 195 | 9.64e-54 | 171 |
| MsG0480019221.01.T01 | MTR_4g050300 | 51.724 | 174 | 62 | 4 | 22 | 195 | 8 | 159 | 1.16e-47 | 155 |
| MsG0480019221.01.T01 | MTR_5g034030 | 46.746 | 169 | 71 | 3 | 23 | 190 | 12 | 162 | 1.90e-42 | 143 |
| MsG0480019221.01.T01 | MTR_5g046230 | 44.444 | 171 | 64 | 6 | 21 | 189 | 14 | 155 | 2.33e-34 | 122 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019221.01.T01 | AT2G45190 | 67.265 | 223 | 52 | 7 | 19 | 232 | 19 | 229 | 6.12e-93 | 272 |
| MsG0480019221.01.T01 | AT4G00180 | 59.836 | 244 | 59 | 11 | 8 | 230 | 13 | 238 | 2.72e-77 | 233 |
| MsG0480019221.01.T01 | AT4G00180 | 58.636 | 220 | 57 | 10 | 32 | 230 | 1 | 207 | 1.30e-64 | 199 |
| MsG0480019221.01.T01 | AT2G45190 | 62.147 | 177 | 46 | 7 | 65 | 232 | 1 | 165 | 2.68e-62 | 192 |
| MsG0480019221.01.T01 | AT2G26580 | 52.273 | 176 | 55 | 3 | 22 | 197 | 8 | 154 | 1.01e-52 | 168 |
| MsG0480019221.01.T01 | AT2G26580 | 52.273 | 176 | 55 | 3 | 22 | 197 | 8 | 154 | 1.01e-52 | 168 |
| MsG0480019221.01.T01 | AT1G08465 | 53.514 | 185 | 51 | 6 | 22 | 199 | 7 | 163 | 1.85e-52 | 168 |
| MsG0480019221.01.T01 | AT1G23420 | 43.605 | 172 | 84 | 3 | 24 | 193 | 20 | 180 | 1.79e-36 | 128 |
| MsG0480019221.01.T01 | AT1G23420 | 43.605 | 172 | 84 | 3 | 24 | 193 | 51 | 211 | 6.64e-36 | 128 |
| MsG0480019221.01.T01 | AT1G69180 | 37.500 | 168 | 76 | 3 | 22 | 189 | 18 | 156 | 6.96e-28 | 105 |
Find 73 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTCAAGTTGTTAGTTTA+TGG | 0.092458 | 4:+16411350 | MsG0480019221.01.T01:three_prime_UTR |
| TATAATCTTAAGATTCTTTA+TGG | 0.132157 | 4:-16411399 | None:intergenic |
| CTATTAGCAGGTGGAGGTTT+AGG | 0.195251 | 4:-16409143 | None:intergenic |
| CGATGCTACTTAAGTATTAA+AGG | 0.214516 | 4:-16408055 | None:intergenic |
| CTTCAATCCTCAAACTCTTA+TGG | 0.288001 | 4:+16408657 | MsG0480019221.01.T01:CDS |
| CACTTTCCACACATTCATTT+CGG | 0.297543 | 4:+16410949 | MsG0480019221.01.T01:CDS |
| ATCATCAAATCATTTGGATT+TGG | 0.304994 | 4:-16409086 | None:intergenic |
| AGAGTTGTTGCTGTTGTTGC+TGG | 0.315337 | 4:-16408337 | None:intergenic |
| AAAGAAGGAAAAGACTTTCT+AGG | 0.330189 | 4:+16408020 | None:intergenic |
| TATTAGCAGGTGGAGGTTTA+GGG | 0.330394 | 4:-16409142 | None:intergenic |
| GCCTCTCTGTGGCTTATATC+AGG | 0.334060 | 4:-16410717 | None:intergenic |
| GACTGATCAGTGAAGTTTCT+TGG | 0.340647 | 4:-16408196 | None:intergenic |
| TTCTTCACGGGTTGATGATC+AGG | 0.349751 | 4:-16410979 | None:intergenic |
| AACAAACACACTTCTTTAGT+AGG | 0.360387 | 4:-16411214 | None:intergenic |
| GTGTTCATCATCAAATCATT+TGG | 0.376681 | 4:-16409092 | None:intergenic |
| TGTCCAAGGTGAAGTTGATT+TGG | 0.407277 | 4:-16408628 | None:intergenic |
| TGATTGTTAAGTTACTGTTT+AGG | 0.410029 | 4:-16408120 | None:intergenic |
| TGTTGCTGTTGTTGCTGGTC+CGG | 0.423782 | 4:-16408332 | None:intergenic |
| GAGGACGTGCTTATGAAAGA+TGG | 0.432558 | 4:+16411159 | MsG0480019221.01.T01:CDS |
| AGATAGATATAAACTTCATA+TGG | 0.453137 | 4:-16408155 | None:intergenic |
| GGAGATAAATATGAAAGAAA+AGG | 0.454485 | 4:-16408093 | None:intergenic |
| ACTGATCAGTGAAGTTTCTT+GGG | 0.455223 | 4:-16408195 | None:intergenic |
| TTCATCATCATGTTTGTTGA+AGG | 0.455442 | 4:-16409056 | None:intergenic |
| AATTTCTTACGTCTATTAGC+AGG | 0.457462 | 4:-16409155 | None:intergenic |
| ACACATACCATAAGAGTTTG+AGG | 0.470299 | 4:-16408664 | None:intergenic |
| GAGATCCAACGTATCAAAGC+TGG | 0.478771 | 4:+16410690 | MsG0480019221.01.T01:CDS |
| TGTTAAGTTACTGTTTAGGA+AGG | 0.483028 | 4:-16408116 | None:intergenic |
| TTAGTTTATGGTATAATGAA+TGG | 0.494225 | 4:+16411362 | MsG0480019221.01.T01:three_prime_UTR |
| GAAGAAAGCTAATGTTCGTC+AGG | 0.494623 | 4:+16410996 | MsG0480019221.01.T01:CDS |
| CGAACATTAGCTTTCTTCAC+GGG | 0.494923 | 4:-16410991 | None:intergenic |
| ACAAACACACTTCTTTAGTA+GGG | 0.496640 | 4:-16411213 | None:intergenic |
| AATTCTTCTGAAAATCAAGA+TGG | 0.500730 | 4:+16411422 | MsG0480019221.01.T01:three_prime_UTR |
| GGAACTCTCTGTCTCTTCTC+CGG | 0.501243 | 4:-16410119 | None:intergenic |
| CGAAATGAATGTGTGGAAAG+TGG | 0.502844 | 4:-16410948 | None:intergenic |
| TTGTTGCTGGTCCGGTGAAA+AGG | 0.508490 | 4:-16408324 | None:intergenic |
| TTAAGTTACTGTTTAGGAAG+GGG | 0.512648 | 4:-16408114 | None:intergenic |
| GGTATAATGAATGGTGGGAG+AGG | 0.513224 | 4:+16411371 | MsG0480019221.01.T01:three_prime_UTR |
| AGGTGAAGTTGATTTGGAGC+AGG | 0.517398 | 4:-16408622 | None:intergenic |
| ACAGCAACAACTCTCTCCTT+CGG | 0.518591 | 4:+16408346 | MsG0480019221.01.T01:CDS |
| CCATAAACTAACAACTTGAA+AGG | 0.521568 | 4:-16411350 | None:intergenic |
| TGCAATGGACATAACAAAGC+TGG | 0.526911 | 4:-16408370 | None:intergenic |
| ATTAAACTTACTTGATGAAG+CGG | 0.531165 | 4:-16410154 | None:intergenic |
| ACGAACATTAGCTTTCTTCA+CGG | 0.533864 | 4:-16410992 | None:intergenic |
| GTTAAGTTACTGTTTAGGAA+GGG | 0.540423 | 4:-16408115 | None:intergenic |
| TTACGTCTATTAGCAGGTGG+AGG | 0.545636 | 4:-16409149 | None:intergenic |
| GTTTATGGTATAATGAATGG+TGG | 0.545874 | 4:+16411365 | MsG0480019221.01.T01:three_prime_UTR |
| CTGGTCCGGTGAAAAGGAAG+TGG | 0.549720 | 4:-16408318 | None:intergenic |
| AGGACGTGCTTATGAAAGAT+GGG | 0.553995 | 4:+16411160 | MsG0480019221.01.T01:CDS |
| TTTCATTGTGTAGGATTCAG+AGG | 0.560695 | 4:+16411140 | MsG0480019221.01.T01:intron |
| ATGAAGCGGTTGTAAGCAGA+TGG | 0.561893 | 4:-16410140 | None:intergenic |
| TTCTTACGTCTATTAGCAGG+TGG | 0.566691 | 4:-16409152 | None:intergenic |
| GATTCCCAGCTTTGATACGT+TGG | 0.580008 | 4:-16410695 | None:intergenic |
| TTTATGGTATAATGAATGGT+GGG | 0.581326 | 4:+16411366 | MsG0480019221.01.T01:three_prime_UTR |
| GAAGTTGATTTGGAGCAGGA+AGG | 0.583401 | 4:-16408618 | None:intergenic |
| ACAGTAACTTAACAATCAAG+AGG | 0.585860 | 4:+16408125 | MsG0480019221.01.T01:five_prime_UTR |
| AAAGGAAGTGGATGATGAAG+AGG | 0.587043 | 4:-16408306 | None:intergenic |
| GCTCCAAATCAACTTCACCT+TGG | 0.591195 | 4:+16408625 | MsG0480019221.01.T01:CDS |
| AGATCCAACGTATCAAAGCT+GGG | 0.600203 | 4:+16410691 | MsG0480019221.01.T01:CDS |
| GAAATGAATGTGTGGAAAGT+GGG | 0.615090 | 4:-16410947 | None:intergenic |
| ATGATGAACACAATGAGAGG+AGG | 0.619560 | 4:+16409104 | MsG0480019221.01.T01:CDS |
| CACGCATGTTAACTGAGAGA+AGG | 0.621310 | 4:-16408588 | None:intergenic |
| CATGTTAACTGAGAGAAGGT+TGG | 0.622869 | 4:-16408584 | None:intergenic |
| TGATGAACACAATGAGAGGA+GGG | 0.625320 | 4:+16409105 | MsG0480019221.01.T01:CDS |
| ACATAACAAAGCTGGTCCGA+AGG | 0.642303 | 4:-16408362 | None:intergenic |
| GATTGAAGTAAGTGTGTCCA+AGG | 0.648511 | 4:-16408642 | None:intergenic |
| GTCTTGAACAAACTTGTGCA+AGG | 0.649953 | 4:-16408535 | None:intergenic |
| CAGTGTCACAGAAATTGCAA+TGG | 0.650774 | 4:-16408385 | None:intergenic |
| TTTCTGTGACACTGTTCTCG+CGG | 0.670363 | 4:+16408394 | MsG0480019221.01.T01:CDS |
| CTGCACTAAAAGCCTCTCTG+TGG | 0.673003 | 4:-16410728 | None:intergenic |
| AAGACTGTGACAGTGAGATG+TGG | 0.685505 | 4:+16408553 | MsG0480019221.01.T01:CDS |
| TTGATGATGAACACAATGAG+AGG | 0.686722 | 4:+16409101 | MsG0480019221.01.T01:CDS |
| TCCTGATATAAGCCACAGAG+AGG | 0.691291 | 4:+16410716 | MsG0480019221.01.T01:CDS |
| ATAAGTCCGAAATGAATGTG+TGG | 0.723401 | 4:-16410955 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATAATTTTTAATTTTTAT+TGG | + | Chr4:16410841-16410860 | MsG0480019221.01.T01:intron | 0.0% |
| !!! | TATAATTTTTAATTTTTATT+GGG | + | Chr4:16410842-16410861 | MsG0480019221.01.T01:intron | 0.0% |
| !! | AAATTGAAAATAATCTAAAA+TGG | - | Chr4:16410812-16410831 | None:intergenic | 10.0% |
| !! | AATCTTAACTATTAATTAAA+AGG | - | Chr4:16408471-16408490 | None:intergenic | 10.0% |
| !! | ATCTTAACTATTAATTAAAA+GGG | - | Chr4:16408470-16408489 | None:intergenic | 10.0% |
| !! | GATAAATTCTTTAAATATTA+GGG | - | Chr4:16410253-16410272 | None:intergenic | 10.0% |
| !! | TGATAAATTCTTTAAATATT+AGG | - | Chr4:16410254-16410273 | None:intergenic | 10.0% |
| !!! | AATTGAAAATAATCTAAAAT+GGG | - | Chr4:16410811-16410830 | None:intergenic | 10.0% |
| !!! | ACATAAACATTTTTATTTTT+TGG | + | Chr4:16410318-16410337 | MsG0480019221.01.T01:intron | 10.0% |
| !!! | TTCTTTTTACTAATTAAAAA+TGG | + | Chr4:16410451-16410470 | MsG0480019221.01.T01:intron | 10.0% |
| !!! | TTTTTCATTTTTTTTTCTTT+TGG | + | Chr4:16411058-16411077 | MsG0480019221.01.T01:intron | 10.0% |
| !!! | TTTTTTATTTTGTTTTTCTT+AGG | + | Chr4:16408504-16408523 | MsG0480019221.01.T01:intron | 10.0% |
| !! | AAGAAAAATAAATTCATATG+TGG | - | Chr4:16410543-16410562 | None:intergenic | 15.0% |
| !! | ACATAGAGTAAAAAAAAAAA+AGG | - | Chr4:16409854-16409873 | None:intergenic | 15.0% |
| !! | ATCAATTTATGAAATTATCT+AGG | + | Chr4:16408865-16408884 | MsG0480019221.01.T01:intron | 15.0% |
| !! | ATTTGGAGAAAATATTATAA+TGG | + | Chr4:16410404-16410423 | MsG0480019221.01.T01:intron | 15.0% |
| !! | CTCTAATTTGAAAATAATAT+TGG | - | Chr4:16409681-16409700 | None:intergenic | 15.0% |
| !! | GGTTTAATTAATTATTATTC+AGG | + | Chr4:16409016-16409035 | MsG0480019221.01.T01:intron | 15.0% |
| !! | TATAATCTTAAGATTCTTTA+TGG | - | Chr4:16411402-16411421 | None:intergenic | 15.0% |
| !! | TTAATTAATTATTATTCAGG+AGG | + | Chr4:16409019-16409038 | MsG0480019221.01.T01:intron | 15.0% |
| !! | TTGAAGATTTGTAAATTTAA+TGG | + | Chr4:16408818-16408837 | MsG0480019221.01.T01:intron | 15.0% |
| !! | TTTACTAATTAAAAATGGTA+TGG | + | Chr4:16410456-16410475 | MsG0480019221.01.T01:intron | 15.0% |
| !! | TTTAGTATATCAATTGTATT+TGG | + | Chr4:16410387-16410406 | MsG0480019221.01.T01:intron | 15.0% |
| !!! | AAAATATGATTTGATTTTCA+GGG | + | Chr4:16410665-16410684 | MsG0480019221.01.T01:CDS | 15.0% |
| !!! | ATTTTTGTATTTTGGAAATT+AGG | + | Chr4:16408937-16408956 | MsG0480019221.01.T01:intron | 15.0% |
| !!! | CATTCATTTTAAGTTATTTT+TGG | + | Chr4:16410179-16410198 | MsG0480019221.01.T01:intron | 15.0% |
| !!! | CATTTTCTTTATCAAAAAAT+TGG | + | Chr4:16409717-16409736 | MsG0480019221.01.T01:intron | 15.0% |
| !!! | GATAATTCATTTAACTTTAA+TGG | + | Chr4:16410580-16410599 | MsG0480019221.01.T01:intron | 15.0% |
| !!! | TGTAAATTTAATGGATTATT+TGG | + | Chr4:16408827-16408846 | MsG0480019221.01.T01:intron | 15.0% |
| !!! | TGTTTTGTATTTTTGTATTT+TGG | + | Chr4:16408929-16408948 | MsG0480019221.01.T01:intron | 15.0% |
| !!! | TTTTTTGATAAAGAAAATGT+TGG | - | Chr4:16409716-16409735 | None:intergenic | 15.0% |
| !! | AAAAAAGAGAAGGAAAAAAA+AGG | + | Chr4:16409476-16409495 | MsG0480019221.01.T01:intron | 20.0% |
| !! | AAAAATCAAGAATTCAGAAA+AGG | + | Chr4:16408238-16408257 | MsG0480019221.01.T01:five_prime_UTR | 20.0% |
| !! | AAAGAAAATGTTGGAAATTA+GGG | - | Chr4:16409707-16409726 | None:intergenic | 20.0% |
| !! | AGATAGATATAAACTTCATA+TGG | - | Chr4:16408158-16408177 | None:intergenic | 20.0% |
| !! | TAAAGAAAATGTTGGAAATT+AGG | - | Chr4:16409708-16409727 | None:intergenic | 20.0% |
| !! | TACTTCAAACTATTTACAAA+AGG | + | Chr4:16409793-16409812 | MsG0480019221.01.T01:intron | 20.0% |
| !! | TTAGTTTATGGTATAATGAA+TGG | + | Chr4:16411362-16411381 | MsG0480019221.01.T01:three_prime_UTR | 20.0% |
| !!! | AATCAAATCATATTTTGTCA+AGG | - | Chr4:16410661-16410680 | None:intergenic | 20.0% |
| !!! | ATATATATATGTAGTTTGCT+TGG | - | Chr4:16408788-16408807 | None:intergenic | 20.0% |
| !!! | CAAAATATGATTTGATTTTC+AGG | + | Chr4:16410664-16410683 | MsG0480019221.01.T01:CDS | 20.0% |
| !!! | GATTTTTTGATTTGATTGAT+GGG | - | Chr4:16408225-16408244 | None:intergenic | 20.0% |
| !!! | TGATTTTTTGATTTGATTGA+TGG | - | Chr4:16408226-16408245 | None:intergenic | 20.0% |
| !!! | TGCTAAACATTTTGTTATTA+CGG | + | Chr4:16410515-16410534 | MsG0480019221.01.T01:intron | 20.0% |
| !!! | TGTATTATTTTCTCATTTGT+GGG | + | Chr4:16410900-16410919 | MsG0480019221.01.T01:intron | 20.0% |
| !!! | TTTGTTGATTATGAGAAATT+TGG | + | Chr4:16408995-16409014 | MsG0480019221.01.T01:intron | 20.0% |
| !!! | TTTTGCTTTTGTACATTAAT+TGG | - | Chr4:16409460-16409479 | None:intergenic | 20.0% |
| ! | AGAGAAAACTTATAATGATG+AGG | + | Chr4:16409968-16409987 | MsG0480019221.01.T01:intron | 25.0% |
| ! | AGTAAGATTCAGAATTTCAT+TGG | - | Chr4:16410772-16410791 | None:intergenic | 25.0% |
| ! | ATCATCAAATCATTTGGATT+TGG | - | Chr4:16409089-16409108 | None:intergenic | 25.0% |
| ! | ATTAAACTTACTTGATGAAG+CGG | - | Chr4:16410157-16410176 | None:intergenic | 25.0% |
| ! | CAAAAATACAAAACAACCAT+AGG | - | Chr4:16408924-16408943 | None:intergenic | 25.0% |
| ! | CTAAAATTCTTTCATTGTGT+AGG | + | Chr4:16411131-16411150 | MsG0480019221.01.T01:intron | 25.0% |
| ! | GGAGATAAATATGAAAGAAA+AGG | - | Chr4:16408096-16408115 | None:intergenic | 25.0% |
| ! | TGATTGTTAAGTTACTGTTT+AGG | - | Chr4:16408123-16408142 | None:intergenic | 25.0% |
| ! | TTTATGGTATAATGAATGGT+GGG | + | Chr4:16411366-16411385 | MsG0480019221.01.T01:three_prime_UTR | 25.0% |
| !! | AAAGCATAACTCTTATTTCT+AGG | + | Chr4:16411097-16411116 | MsG0480019221.01.T01:intron | 25.0% |
| !! | AACTCAAAAGAAGTGTAAAA+TGG | - | Chr4:16409419-16409438 | None:intergenic | 25.0% |
| !! | AATTCTTCTGAAAATCAAGA+TGG | + | Chr4:16411422-16411441 | MsG0480019221.01.T01:three_prime_UTR | 25.0% |
| !! | AGTACACATTTTTATTGCAT+CGG | + | Chr4:16410877-16410896 | MsG0480019221.01.T01:intron | 25.0% |
| !! | CTACACAATGAAAGAATTTT+AGG | - | Chr4:16411133-16411152 | None:intergenic | 25.0% |
| !! | GTATTATTTTCTCATTTGTG+GGG | + | Chr4:16410901-16410920 | MsG0480019221.01.T01:intron | 25.0% |
| !! | GTGTATTATTTTCTCATTTG+TGG | + | Chr4:16410899-16410918 | MsG0480019221.01.T01:intron | 25.0% |
| !!! | AAGCATAACTCTTATTTCTA+GGG | + | Chr4:16411098-16411117 | MsG0480019221.01.T01:intron | 25.0% |
| !!! | ACAACATTTTTTTTGGACAA+AGG | + | Chr4:16410279-16410298 | MsG0480019221.01.T01:intron | 25.0% |
| !!! | ATTTTCAAGTGAGTTTTGAT+AGG | - | Chr4:16409509-16409528 | None:intergenic | 25.0% |
| !!! | CAAGAGTACAACATTTTTTT+TGG | + | Chr4:16410272-16410291 | MsG0480019221.01.T01:intron | 25.0% |
| !!! | TATACAACTATCTTTTGAGT+TGG | + | Chr4:16408960-16408979 | MsG0480019221.01.T01:intron | 25.0% |
| !!! | TCCATTTATTTTCTTTCAGT+GGG | + | Chr4:16410924-16410943 | MsG0480019221.01.T01:intron | 25.0% |
| !!! | TGTGTTTGTTTTATTGTGTA+GGG | + | Chr4:16411227-16411246 | MsG0480019221.01.T01:three_prime_UTR | 25.0% |
| !!! | TTTTCAAGTGAGTTTTGATA+GGG | - | Chr4:16409508-16409527 | None:intergenic | 25.0% |
| AAAAATAGAGCTGAATCCAT+TGG | + | Chr4:16409930-16409949 | MsG0480019221.01.T01:intron | 30.0% | |
| AACAAACACACTTCTTTAGT+AGG | - | Chr4:16411217-16411236 | None:intergenic | 30.0% | |
| AATTTCTTACGTCTATTAGC+AGG | - | Chr4:16409158-16409177 | None:intergenic | 30.0% | |
| ACAAACACACTTCTTTAGTA+GGG | - | Chr4:16411216-16411235 | None:intergenic | 30.0% | |
| ACAGTAACTTAACAATCAAG+AGG | + | Chr4:16408125-16408144 | MsG0480019221.01.T01:five_prime_UTR | 30.0% | |
| AGAAACCCTATACAAAATCT+AGG | + | Chr4:16409740-16409759 | MsG0480019221.01.T01:intron | 30.0% | |
| ATTCTGAATCTTACTCTCTT+AGG | + | Chr4:16410777-16410796 | MsG0480019221.01.T01:intron | 30.0% | |
| CCATAAACTAACAACTTGAA+AGG | - | Chr4:16411353-16411372 | None:intergenic | 30.0% | |
| GAAACCCTATACAAAATCTA+GGG | + | Chr4:16409741-16409760 | MsG0480019221.01.T01:intron | 30.0% | |
| GTACAAAAGCAAAAAAGAGA+AGG | + | Chr4:16409466-16409485 | MsG0480019221.01.T01:intron | 30.0% | |
| GTGTTCATCATCAAATCATT+TGG | - | Chr4:16409095-16409114 | None:intergenic | 30.0% | |
| GTTAAGTTACTGTTTAGGAA+GGG | - | Chr4:16408118-16408137 | None:intergenic | 30.0% | |
| GTTTATGGTATAATGAATGG+TGG | + | Chr4:16411365-16411384 | MsG0480019221.01.T01:three_prime_UTR | 30.0% | |
| TAATAACAATCACTCTCCAA+TGG | - | Chr4:16409949-16409968 | None:intergenic | 30.0% | |
| TGTTAAGTTACTGTTTAGGA+AGG | - | Chr4:16408119-16408138 | None:intergenic | 30.0% | |
| TTAAGTTACTGTTTAGGAAG+GGG | - | Chr4:16408117-16408136 | None:intergenic | 30.0% | |
| TTTCTTGATGTACTTCAAAG+TGG | + | Chr4:16409540-16409559 | MsG0480019221.01.T01:intron | 30.0% | |
| ! | AGATTCTTTTGATGCTATCA+TGG | + | Chr4:16409349-16409368 | MsG0480019221.01.T01:intron | 30.0% |
| ! | CGATGCTACTTAAGTATTAA+AGG | - | Chr4:16408058-16408077 | None:intergenic | 30.0% |
| ! | GATTCTTTTGATGCTATCAT+GGG | + | Chr4:16409350-16409369 | MsG0480019221.01.T01:intron | 30.0% |
| ! | GTTTATAAAGAGAAAGTGTG+AGG | - | Chr4:16408433-16408452 | None:intergenic | 30.0% |
| ! | TTAGCCCTAGATTTTGTATA+GGG | - | Chr4:16409748-16409767 | None:intergenic | 30.0% |
| ! | TTCATCATCATGTTTGTTGA+AGG | - | Chr4:16409059-16409078 | None:intergenic | 30.0% |
| ! | TTTAGCCCTAGATTTTGTAT+AGG | - | Chr4:16409749-16409768 | None:intergenic | 30.0% |
| ! | TTTTTCACACAAGCAAATGT+AGG | + | Chr4:16411183-16411202 | MsG0480019221.01.T01:CDS | 30.0% |
| !! | CCTTTCAAGTTGTTAGTTTA+TGG | + | Chr4:16411350-16411369 | MsG0480019221.01.T01:three_prime_UTR | 30.0% |
| !! | GTCCATTTATTTTCTTTCAG+TGG | + | Chr4:16410923-16410942 | MsG0480019221.01.T01:intron | 30.0% |
| !! | GTTAATTTTTGTTGTGCCTA+TGG | + | Chr4:16408905-16408924 | MsG0480019221.01.T01:intron | 30.0% |
| !!! | ACTATCTTTTGAGTTGGAAT+TGG | + | Chr4:16408966-16408985 | MsG0480019221.01.T01:intron | 30.0% |
| !!! | ATCAAGATGGTTTGTTTTCT+AGG | + | Chr4:16411435-16411454 | MsG0480019221.01.T01:three_prime_UTR | 30.0% |
| !!! | GTGTGTTTGTTTTATTGTGT+AGG | + | Chr4:16411226-16411245 | MsG0480019221.01.T01:three_prime_UTR | 30.0% |
| !!! | TTTTGAGTTGGAATTGGAAA+GGG | + | Chr4:16408972-16408991 | MsG0480019221.01.T01:intron | 30.0% |
| ACACATACCATAAGAGTTTG+AGG | - | Chr4:16408667-16408686 | None:intergenic | 35.0% | |
| ACATGAGAAATGGTGAAGAA+GGG | - | Chr4:16409282-16409301 | None:intergenic | 35.0% | |
| ACTGATCAGTGAAGTTTCTT+GGG | - | Chr4:16408198-16408217 | None:intergenic | 35.0% | |
| AGCATAGCATACATGAGAAA+TGG | - | Chr4:16409292-16409311 | None:intergenic | 35.0% | |
| AGGTAATATTGTAGCTAGCT+AGG | - | Chr4:16411034-16411053 | None:intergenic | 35.0% | |
| AGTTGTCAGAGTTTGAATCT+CGG | + | Chr4:16408735-16408754 | MsG0480019221.01.T01:intron | 35.0% | |
| ATAAGTCCGAAATGAATGTG+TGG | - | Chr4:16410958-16410977 | None:intergenic | 35.0% | |
| CACTTTCCACACATTCATTT+CGG | + | Chr4:16410949-16410968 | MsG0480019221.01.T01:CDS | 35.0% | |
| CTTCAATCCTCAAACTCTTA+TGG | + | Chr4:16408657-16408676 | MsG0480019221.01.T01:CDS | 35.0% | |
| GAAATGAATGTGTGGAAAGT+GGG | - | Chr4:16410950-16410969 | None:intergenic | 35.0% | |
| GAAGTGTAAAATGGACAGAA+GGG | - | Chr4:16409410-16409429 | None:intergenic | 35.0% | |
| GCCCACTGAAAGAAAATAAA+TGG | - | Chr4:16410928-16410947 | None:intergenic | 35.0% | |
| GGTAATATTGTAGCTAGCTA+GGG | - | Chr4:16411033-16411052 | None:intergenic | 35.0% | |
| TACATGAGAAATGGTGAAGA+AGG | - | Chr4:16409283-16409302 | None:intergenic | 35.0% | |
| TTTCATTGTGTAGGATTCAG+AGG | + | Chr4:16411140-16411159 | MsG0480019221.01.T01:intron | 35.0% | |
| ! | AGAAGTGTAAAATGGACAGA+AGG | - | Chr4:16409411-16409430 | None:intergenic | 35.0% |
| ! | GAAAGAAGAGAGTTCTGATT+TGG | + | Chr4:16410032-16410051 | MsG0480019221.01.T01:intron | 35.0% |
| ! | TTTTGATGCTATCATGGGAA+AGG | + | Chr4:16409355-16409374 | MsG0480019221.01.T01:intron | 35.0% |
| !! | ACGAACATTAGCTTTCTTCA+CGG | - | Chr4:16410995-16411014 | None:intergenic | 35.0% |
| !! | GCTGAAACACTTTTAAGAAG+AGG | - | Chr4:16408762-16408781 | None:intergenic | 35.0% |
| !! | TGGATTCAGCTCTATTTTTC+CGG | - | Chr4:16409929-16409948 | None:intergenic | 35.0% |
| !! | TTGATGATGAACACAATGAG+AGG | + | Chr4:16409101-16409120 | MsG0480019221.01.T01:CDS | 35.0% |
| !!! | CTTTTGAGTTGGAATTGGAA+AGG | + | Chr4:16408971-16408990 | MsG0480019221.01.T01:intron | 35.0% |
| AAAATGGACAGAAGGGTTTC+AGG | - | Chr4:16409403-16409422 | None:intergenic | 40.0% | |
| AAAGGAAGTGGATGATGAAG+AGG | - | Chr4:16408309-16408328 | None:intergenic | 40.0% | |
| AGATCCAACGTATCAAAGCT+GGG | + | Chr4:16410691-16410710 | MsG0480019221.01.T01:CDS | 40.0% | |
| AGGACGTGCTTATGAAAGAT+GGG | + | Chr4:16411160-16411179 | MsG0480019221.01.T01:CDS | 40.0% | |
| ATGATGAACACAATGAGAGG+AGG | + | Chr4:16409104-16409123 | MsG0480019221.01.T01:CDS | 40.0% | |
| CAGTGTCACAGAAATTGCAA+TGG | - | Chr4:16408388-16408407 | None:intergenic | 40.0% | |
| CATGTTAACTGAGAGAAGGT+TGG | - | Chr4:16408587-16408606 | None:intergenic | 40.0% | |
| CGAAATGAATGTGTGGAAAG+TGG | - | Chr4:16410951-16410970 | None:intergenic | 40.0% | |
| GAAGAAAGCTAATGTTCGTC+AGG | + | Chr4:16410996-16411015 | MsG0480019221.01.T01:CDS | 40.0% | |
| GACTGATCAGTGAAGTTTCT+TGG | - | Chr4:16408199-16408218 | None:intergenic | 40.0% | |
| GATTGAAGTAAGTGTGTCCA+AGG | - | Chr4:16408645-16408664 | None:intergenic | 40.0% | |
| GTCTTGAACAAACTTGTGCA+AGG | - | Chr4:16408538-16408557 | None:intergenic | 40.0% | |
| TATTAGCAGGTGGAGGTTTA+GGG | - | Chr4:16409145-16409164 | None:intergenic | 40.0% | |
| TCACTCAATGTTTGCATGCA+AGG | - | Chr4:16409891-16409910 | None:intergenic | 40.0% | |
| TGATGAACACAATGAGAGGA+GGG | + | Chr4:16409105-16409124 | MsG0480019221.01.T01:CDS | 40.0% | |
| TGCAATGGACATAACAAAGC+TGG | - | Chr4:16408373-16408392 | None:intergenic | 40.0% | |
| TTCTTACGTCTATTAGCAGG+TGG | - | Chr4:16409155-16409174 | None:intergenic | 40.0% | |
| ! | ATCATCCACTTCCTTTTCAC+CGG | + | Chr4:16408313-16408332 | MsG0480019221.01.T01:CDS | 40.0% |
| ! | TGTCCAAGGTGAAGTTGATT+TGG | - | Chr4:16408631-16408650 | None:intergenic | 40.0% |
| !! | ATTCAGCTCTATTTTTCCGG+GGG | - | Chr4:16409926-16409945 | None:intergenic | 40.0% |
| !! | CAAGTGAGTTTTGATAGGGA+TGG | - | Chr4:16409504-16409523 | None:intergenic | 40.0% |
| !! | CGAACATTAGCTTTCTTCAC+GGG | - | Chr4:16410994-16411013 | None:intergenic | 40.0% |
| !! | GATTCAGCTCTATTTTTCCG+GGG | - | Chr4:16409927-16409946 | None:intergenic | 40.0% |
| !! | GGATTCAGCTCTATTTTTCC+GGG | - | Chr4:16409928-16409947 | None:intergenic | 40.0% |
| AAGACTGTGACAGTGAGATG+TGG | + | Chr4:16408553-16408572 | MsG0480019221.01.T01:CDS | 45.0% | |
| ACAGCAACAACTCTCTCCTT+CGG | + | Chr4:16408346-16408365 | MsG0480019221.01.T01:CDS | 45.0% | |
| ACATAACAAAGCTGGTCCGA+AGG | - | Chr4:16408365-16408384 | None:intergenic | 45.0% | |
| ATGAAGCGGTTGTAAGCAGA+TGG | - | Chr4:16410143-16410162 | None:intergenic | 45.0% | |
| CACGCATGTTAACTGAGAGA+AGG | - | Chr4:16408591-16408610 | None:intergenic | 45.0% | |
| CTATTAGCAGGTGGAGGTTT+AGG | - | Chr4:16409146-16409165 | None:intergenic | 45.0% | |
| GAGATCCAACGTATCAAAGC+TGG | + | Chr4:16410690-16410709 | MsG0480019221.01.T01:CDS | 45.0% | |
| GAGGACGTGCTTATGAAAGA+TGG | + | Chr4:16411159-16411178 | MsG0480019221.01.T01:CDS | 45.0% | |
| GATGCTATCATGGGAAAGGT+AGG | + | Chr4:16409359-16409378 | MsG0480019221.01.T01:intron | 45.0% | |
| GCTCCAAATCAACTTCACCT+TGG | + | Chr4:16408625-16408644 | MsG0480019221.01.T01:CDS | 45.0% | |
| TCCTGATATAAGCCACAGAG+AGG | + | Chr4:16410716-16410735 | MsG0480019221.01.T01:CDS | 45.0% | |
| TTACGTCTATTAGCAGGTGG+AGG | - | Chr4:16409152-16409171 | None:intergenic | 45.0% | |
| TTTCTGTGACACTGTTCTCG+CGG | + | Chr4:16408394-16408413 | MsG0480019221.01.T01:CDS | 45.0% | |
| ! | AGAGTTGTTGCTGTTGTTGC+TGG | - | Chr4:16408340-16408359 | None:intergenic | 45.0% |
| ! | GATTCCCAGCTTTGATACGT+TGG | - | Chr4:16410698-16410717 | None:intergenic | 45.0% |
| ! | GGTATAATGAATGGTGGGAG+AGG | + | Chr4:16411371-16411390 | MsG0480019221.01.T01:three_prime_UTR | 45.0% |
| !! | AGGTGAAGTTGATTTGGAGC+AGG | - | Chr4:16408625-16408644 | None:intergenic | 45.0% |
| !! | GAAGTTGATTTGGAGCAGGA+AGG | - | Chr4:16408621-16408640 | None:intergenic | 45.0% |
| !! | TTCTTCACGGGTTGATGATC+AGG | - | Chr4:16410982-16411001 | None:intergenic | 45.0% |
| !! | AAAAAAAAATGAAAAAAAAA+AGG | - | Chr4:16411054-16411073 | None:intergenic | 5.0% |
| !!! | AAATTTATTCAAAATTTTTT+AGG | + | Chr4:16409827-16409846 | MsG0480019221.01.T01:intron | 5.0% |
| !!! | AGTATTTTTTTTAATTAATT+TGG | - | Chr4:16409653-16409672 | None:intergenic | 5.0% |
| CAAACACACGGACATTGCTC+AGG | - | Chr4:16410088-16410107 | None:intergenic | 50.0% | |
| CATTGCTCAGGCAAACAGAC+AGG | - | Chr4:16410076-16410095 | None:intergenic | 50.0% | |
| CTGCACTAAAAGCCTCTCTG+TGG | - | Chr4:16410731-16410750 | None:intergenic | 50.0% | |
| GAGCTGGACAAGCAAACACA+CGG | - | Chr4:16410100-16410119 | None:intergenic | 50.0% | |
| GCCTCTCTGTGGCTTATATC+AGG | - | Chr4:16410720-16410739 | None:intergenic | 50.0% | |
| GGAACTCTCTGTCTCTTCTC+CGG | - | Chr4:16410122-16410141 | None:intergenic | 50.0% | |
| TGTGTTTGCTTGTCCAGCTC+CGG | + | Chr4:16410100-16410119 | MsG0480019221.01.T01:intron | 50.0% | |
| TTGTTGCTGGTCCGGTGAAA+AGG | - | Chr4:16408327-16408346 | None:intergenic | 50.0% | |
| ! | TGTTGCTGTTGTTGCTGGTC+CGG | - | Chr4:16408335-16408354 | None:intergenic | 50.0% |
| CTGGTCCGGTGAAAAGGAAG+TGG | - | Chr4:16408321-16408340 | None:intergenic | 55.0% | |
| GTGAGACAGAAGTCTTCCCC+CGG | + | Chr4:16409907-16409926 | MsG0480019221.01.T01:intron | 55.0% | |
| CTCTGTCTCTTCTCCGGAGC+TGG | - | Chr4:16410116-16410135 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 16408025 | 16411454 | 16408025 | ID=MsG0480019221.01;Name=MsG0480019221.01 |
| Chr4 | mRNA | 16408025 | 16411454 | 16408025 | ID=MsG0480019221.01.T01;Parent=MsG0480019221.01;Name=MsG0480019221.01.T01;_AED=0.32;_eAED=0.33;_QI=277|0.83|0.85|1|0.66|0.71|7|233|232 |
| Chr4 | exon | 16408025 | 16408415 | 16408025 | ID=MsG0480019221.01.T01:exon:5230;Parent=MsG0480019221.01.T01 |
| Chr4 | exon | 16408526 | 16408678 | 16408526 | ID=MsG0480019221.01.T01:exon:5231;Parent=MsG0480019221.01.T01 |
| Chr4 | exon | 16409038 | 16409167 | 16409038 | ID=MsG0480019221.01.T01:exon:5232;Parent=MsG0480019221.01.T01 |
| Chr4 | exon | 16410117 | 16410165 | 16410117 | ID=MsG0480019221.01.T01:exon:5233;Parent=MsG0480019221.01.T01 |
| Chr4 | exon | 16410653 | 16410761 | 16410653 | ID=MsG0480019221.01.T01:exon:5234;Parent=MsG0480019221.01.T01 |
| Chr4 | exon | 16410943 | 16411017 | 16410943 | ID=MsG0480019221.01.T01:exon:5235;Parent=MsG0480019221.01.T01 |
| Chr4 | exon | 16411153 | 16411454 | 16411153 | ID=MsG0480019221.01.T01:exon:5236;Parent=MsG0480019221.01.T01 |
| Chr4 | five_prime_UTR | 16408025 | 16408301 | 16408025 | ID=MsG0480019221.01.T01:five_prime_utr;Parent=MsG0480019221.01.T01 |
| Chr4 | CDS | 16408302 | 16408415 | 16408302 | ID=MsG0480019221.01.T01:cds;Parent=MsG0480019221.01.T01 |
| Chr4 | CDS | 16408526 | 16408678 | 16408526 | ID=MsG0480019221.01.T01:cds;Parent=MsG0480019221.01.T01 |
| Chr4 | CDS | 16409038 | 16409167 | 16409038 | ID=MsG0480019221.01.T01:cds;Parent=MsG0480019221.01.T01 |
| Chr4 | CDS | 16410117 | 16410165 | 16410117 | ID=MsG0480019221.01.T01:cds;Parent=MsG0480019221.01.T01 |
| Chr4 | CDS | 16410653 | 16410761 | 16410653 | ID=MsG0480019221.01.T01:cds;Parent=MsG0480019221.01.T01 |
| Chr4 | CDS | 16410943 | 16411017 | 16410943 | ID=MsG0480019221.01.T01:cds;Parent=MsG0480019221.01.T01 |
| Chr4 | CDS | 16411153 | 16411221 | 16411153 | ID=MsG0480019221.01.T01:cds;Parent=MsG0480019221.01.T01 |
| Chr4 | three_prime_UTR | 16411222 | 16411454 | 16411222 | ID=MsG0480019221.01.T01:three_prime_utr;Parent=MsG0480019221.01.T01 |
| Gene Sequence |
| Protein sequence |
