AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006783.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006783.01.T01 MTR_2g014770 94.795 634 11 2 1 612 1 634 0.0 1226
MsG0280006783.01.T01 MTR_2g014770 90.228 614 9 2 1 612 1 565 0.0 1117
MsG0280006783.01.T01 MTR_4g088210 65.714 665 158 16 1 628 2 633 0.0 797
MsG0280006783.01.T01 MTR_4g088210 65.714 665 158 16 1 628 2 633 0.0 796
MsG0280006783.01.T01 MTR_4g060460 51.050 476 197 9 52 492 53 527 2.14e-147 446
MsG0280006783.01.T01 MTR_4g060460 50.743 471 201 7 52 492 53 522 7.85e-147 444
MsG0280006783.01.T01 MTR_2g093740 50.105 477 198 10 52 494 55 525 5.18e-146 439
MsG0280006783.01.T01 MTR_2g093740 50.105 477 198 10 52 494 55 525 7.30e-145 438
MsG0280006783.01.T01 MTR_2g093740 50.105 477 198 10 52 494 55 525 1.41e-144 439
MsG0280006783.01.T01 MTR_2g093740 48.776 490 198 11 52 494 55 538 5.52e-142 429
MsG0280006783.01.T01 MTR_2g093740 48.560 486 205 10 52 494 55 538 5.34e-141 429
MsG0280006783.01.T01 MTR_2g093740 48.776 490 198 11 52 494 55 538 1.40e-140 429
MsG0280006783.01.T01 MTR_8g100050 48.157 407 191 3 47 442 53 450 1.48e-122 380
MsG0280006783.01.T01 MTR_8g100050 48.655 409 186 5 47 442 53 450 2.53e-121 380
MsG0280006783.01.T01 MTR_2g093740 51.064 376 160 6 143 494 20 395 3.40e-115 357
MsG0280006783.01.T01 MTR_2g093740 51.064 376 160 6 143 494 20 395 7.77e-115 358
MsG0280006783.01.T01 MTR_2g005240 49.448 362 166 3 53 407 23 374 4.34e-113 353
MsG0280006783.01.T01 MTR_2g093740 49.357 389 160 7 143 494 20 408 1.85e-111 348
MsG0280006783.01.T01 MTR_2g093740 49.357 389 160 7 143 494 20 408 4.27e-111 349
MsG0280006783.01.T01 MTR_4g021580 44.131 426 212 8 53 468 19 428 5.30e-110 344
MsG0280006783.01.T01 MTR_4g021580 44.131 426 212 8 53 468 19 428 1.46e-109 344
MsG0280006783.01.T01 MTR_5g076270 48.446 386 161 7 51 416 20 387 6.70e-108 345
MsG0280006783.01.T01 MTR_4g124900 50.862 348 153 3 49 388 19 356 1.11e-107 350
MsG0280006783.01.T01 MTR_4g124900 50.862 348 153 3 49 388 19 356 1.78e-107 350
MsG0280006783.01.T01 MTR_2g018690 50.000 370 154 9 35 388 4 358 3.12e-107 344
MsG0280006783.01.T01 MTR_2g043250 51.453 344 149 4 53 388 23 356 9.35e-107 347
MsG0280006783.01.T01 MTR_8g079492 49.041 365 164 7 35 388 4 357 1.10e-106 343
MsG0280006783.01.T01 MTR_8g079492 49.041 365 164 7 35 388 4 357 1.29e-106 343
MsG0280006783.01.T01 MTR_3g064050 48.187 386 162 7 51 416 22 389 3.06e-106 340
MsG0280006783.01.T01 MTR_1g024025 50.867 346 147 6 53 387 43 376 5.99e-103 340
MsG0280006783.01.T01 MTR_8g027440 47.107 363 170 7 53 407 29 377 1.10e-101 324
MsG0280006783.01.T01 MTR_8g101360 49.858 351 156 5 48 388 26 366 4.57e-101 332
MsG0280006783.01.T01 MTR_7g062540 42.716 405 201 8 53 447 14 397 2.55e-95 307
MsG0280006783.01.T01 MTR_8g079492 51.049 286 126 5 106 388 1 275 1.09e-86 288
MsG0280006783.01.T01 MTR_2g094570 39.706 408 184 11 53 418 11 398 4.50e-84 277
MsG0280006783.01.T01 MTR_2g094570 39.951 408 183 11 53 418 11 398 8.18e-84 277
MsG0280006783.01.T01 MTR_2g094570 39.706 408 184 11 53 418 67 454 2.49e-83 277
MsG0280006783.01.T01 MTR_1g094960 40.897 379 171 10 51 387 15 382 5.04e-83 273
MsG0280006783.01.T01 MTR_4g058930 36.522 460 227 7 47 462 6 444 5.08e-83 275
MsG0280006783.01.T01 MTR_4g058930 36.522 460 227 7 47 462 6 444 9.16e-83 275
MsG0280006783.01.T01 MTR_1g064430 37.529 429 212 10 51 432 23 442 5.40e-80 267
MsG0280006783.01.T01 MTR_1g064430 37.413 433 207 10 51 432 36 455 8.42e-80 267
MsG0280006783.01.T01 MTR_7g101280 37.018 389 186 9 49 387 27 406 8.03e-71 241
MsG0280006783.01.T01 MTR_0041s0110 37.018 389 186 9 49 387 27 406 8.03e-71 241
MsG0280006783.01.T01 MTR_8g446900 37.941 340 186 6 92 429 7 323 3.99e-69 229
MsG0280006783.01.T01 MTR_3g073420 36.207 406 211 7 39 407 5 399 9.73e-68 232
MsG0280006783.01.T01 MTR_5g061220 34.015 391 198 11 32 387 2 367 1.22e-64 222
MsG0280006783.01.T01 MTR_7g101275 39.610 308 173 5 62 365 1 299 6.91e-64 216
MsG0280006783.01.T01 MTR_5g040880 35.674 356 185 11 47 387 5 331 2.78e-61 213
MsG0280006783.01.T01 MTR_2g024430 35.589 399 219 13 45 431 11 383 2.02e-58 204
MsG0280006783.01.T01 MTR_0041s0120 37.152 323 172 7 62 365 1 311 1.19e-55 194
MsG0280006783.01.T01 MTR_5g082140 34.943 352 185 12 53 387 12 336 1.10e-51 185
MsG0280006783.01.T01 MTR_1g058210 30.595 353 218 9 45 387 3 338 3.65e-51 184
MsG0280006783.01.T01 MTR_2g006270 31.014 345 207 9 53 387 13 336 2.85e-47 173
MsG0280006783.01.T01 MTR_5g040740 31.707 328 188 9 53 368 12 315 5.93e-46 168
MsG0280006783.01.T01 MTR_5g060780 30.214 374 216 13 43 397 4 351 5.86e-42 157
MsG0280006783.01.T01 MTR_5g060630 30.208 384 228 10 44 393 3 380 9.54e-42 159
MsG0280006783.01.T01 MTR_5g460740 30.208 384 228 10 44 393 3 380 9.54e-42 159
MsG0280006783.01.T01 MTR_5g460920 29.947 374 217 13 43 397 4 351 5.20e-41 154
MsG0280006783.01.T01 MTR_2g006380 29.565 345 207 12 53 387 20 338 2.12e-40 154
MsG0280006783.01.T01 MTR_5g061890 29.947 374 217 13 43 397 4 351 5.58e-40 151
MsG0280006783.01.T01 MTR_5g062970 34.783 207 122 4 53 255 38 235 4.97e-33 127
MsG0280006783.01.T01 MTR_3g064050 47.619 126 65 1 292 416 27 152 7.33e-27 115
MsG0280006783.01.T01 MTR_5g032260 38.679 106 64 1 282 386 49 154 1.05e-15 80.1
MsG0280006783.01.T01 MTR_5g074840 45.055 91 50 0 220 310 58 148 3.98e-15 73.9
MsG0280006783.01.T01 MTR_8g023990 36.752 117 72 2 136 252 150 264 1.50e-12 70.9
MsG0280006783.01.T01 MTR_7g117455 41.304 92 53 1 156 247 116 206 1.85e-12 70.1
MsG0280006783.01.T01 MTR_5g060770 22.742 299 165 10 90 387 3 236 3.01e-12 68.9
MsG0280006783.01.T01 MTR_1g058350 30.457 197 125 7 125 310 39 234 2.24e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006783.01.T01 AT2G33860 60.685 496 182 2 2 495 3 487 0.0 607
MsG0280006783.01.T01 AT2G33860 62.757 341 114 2 157 495 1 330 1.82e-148 437
MsG0280006783.01.T01 AT5G60450 50.208 480 195 11 49 492 37 508 8.48e-140 426
MsG0280006783.01.T01 AT5G60450 50.420 476 192 11 53 492 65 532 5.98e-139 424
MsG0280006783.01.T01 AT5G62000 43.617 470 237 6 13 469 27 481 5.63e-120 377
MsG0280006783.01.T01 AT5G62000 44.068 472 232 8 13 469 27 481 6.41e-120 377
MsG0280006783.01.T01 AT5G62000 44.068 472 232 8 13 469 27 481 6.41e-120 377
MsG0280006783.01.T01 AT5G62000 44.068 472 232 8 13 469 27 481 6.41e-120 377
MsG0280006783.01.T01 AT5G62000 44.068 472 232 8 13 469 27 481 6.41e-120 377
MsG0280006783.01.T01 AT1G59750 49.568 347 158 3 49 388 18 354 3.56e-111 348
MsG0280006783.01.T01 AT1G59750 49.568 347 158 3 49 388 18 354 4.16e-111 348
MsG0280006783.01.T01 AT1G59750 49.568 347 158 3 49 388 18 354 4.16e-111 348
MsG0280006783.01.T01 AT1G59750 49.568 347 158 3 49 388 18 354 4.45e-111 348
MsG0280006783.01.T01 AT1G19220 51.603 343 150 2 53 388 23 356 5.47e-108 350
MsG0280006783.01.T01 AT2G46530 49.133 346 151 6 53 388 21 351 2.42e-106 334
MsG0280006783.01.T01 AT5G37020 46.078 408 179 10 47 436 14 398 2.85e-106 338
MsG0280006783.01.T01 AT2G46530 49.133 346 151 6 53 388 42 372 3.24e-106 334
MsG0280006783.01.T01 AT5G37020 46.078 408 179 10 47 436 14 398 7.64e-106 338
MsG0280006783.01.T01 AT3G61830 47.159 352 161 5 47 388 19 355 7.03e-105 330
MsG0280006783.01.T01 AT4G23980 44.330 388 192 6 53 432 12 383 2.85e-104 330
MsG0280006783.01.T01 AT4G23980 44.709 378 182 6 53 415 12 377 3.52e-104 329
MsG0280006783.01.T01 AT1G30330 51.724 348 144 8 53 388 25 360 5.45e-104 337
MsG0280006783.01.T01 AT1G30330 51.724 348 144 8 53 388 25 360 5.45e-104 337
MsG0280006783.01.T01 AT1G30330 51.420 352 139 8 53 388 23 358 6.13e-104 336
MsG0280006783.01.T01 AT5G20730 50.291 344 153 3 53 388 24 357 1.72e-102 337
MsG0280006783.01.T01 AT1G19850 49.570 349 148 6 53 387 43 377 3.60e-102 331
MsG0280006783.01.T01 AT1G19850 49.570 349 148 6 53 387 54 388 4.61e-102 331
MsG0280006783.01.T01 AT5G20730 50.145 345 153 4 53 388 24 358 6.62e-101 332
MsG0280006783.01.T01 AT5G20730 50.145 345 153 4 53 388 24 358 9.23e-101 332
MsG0280006783.01.T01 AT3G61830 48.505 301 142 3 88 388 17 304 8.01e-93 297
MsG0280006783.01.T01 AT1G35540 41.481 405 203 8 53 439 27 415 7.22e-91 293
MsG0280006783.01.T01 AT1G35240 42.092 392 197 8 53 435 27 397 7.92e-90 290
MsG0280006783.01.T01 AT1G34390 42.063 378 190 7 53 419 27 386 3.86e-89 289
MsG0280006783.01.T01 AT1G34410 41.133 406 205 10 53 440 27 416 3.94e-89 289
MsG0280006783.01.T01 AT1G34310 41.799 378 193 6 53 419 27 388 2.59e-87 284
MsG0280006783.01.T01 AT1G35520 41.270 378 195 7 53 419 27 388 2.22e-86 281
MsG0280006783.01.T01 AT1G34170 37.947 419 209 9 53 438 25 425 6.52e-85 275
MsG0280006783.01.T01 AT4G30080 41.398 372 174 9 53 387 19 383 1.24e-82 273
MsG0280006783.01.T01 AT5G37020 51.064 282 126 5 158 436 31 303 3.66e-82 273
MsG0280006783.01.T01 AT2G28350 39.410 373 187 5 53 387 10 381 8.13e-82 271
MsG0280006783.01.T01 AT2G28350 39.410 373 187 5 53 387 10 381 8.87e-82 272
MsG0280006783.01.T01 AT2G46530 54.506 233 99 4 158 388 37 264 2.00e-80 263
MsG0280006783.01.T01 AT1G34170 35.252 417 197 8 53 438 25 399 2.75e-72 241
MsG0280006783.01.T01 AT1G34170 35.627 407 189 8 53 428 25 389 1.81e-71 241
MsG0280006783.01.T01 AT1G77850 34.129 419 211 13 54 432 20 413 4.86e-63 219
MsG0280006783.01.T01 AT1G77850 34.129 419 211 13 54 432 20 413 5.45e-63 219
MsG0280006783.01.T01 AT1G43950 47.170 212 89 6 53 257 27 222 2.00e-52 180
MsG0280006783.01.T01 AT2G46870 38.211 123 68 3 141 258 20 139 6.81e-14 73.6
MsG0280006783.01.T01 AT1G01030 41.304 92 53 1 156 247 54 144 1.66e-13 72.8
MsG0280006783.01.T01 AT1G01030 41.304 92 53 1 156 247 54 144 2.21e-13 72.4
MsG0280006783.01.T01 AT4G01500 40.217 92 52 1 156 247 34 122 2.91e-13 72.0
MsG0280006783.01.T01 AT1G13260 31.410 156 91 3 157 308 187 330 2.21e-12 69.3
MsG0280006783.01.T01 AT3G61970 36.667 120 72 2 140 256 5 123 5.82e-12 67.4
MsG0280006783.01.T01 AT3G25730 31.818 132 78 3 153 282 178 299 5.95e-12 67.8

Find 176 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTGCAGGCCATCCATTTC+TGG 0.192673 2:+6128394 None:intergenic
GTGATGCTGTGTTGTTTCTT+AGG 0.208732 2:-6130150 MsG0280006783.01.T01:intron
CTTGACCTTGCAAGACCTTT+TGG 0.224240 2:+6128513 None:intergenic
TCCTCAAGGTTCTGTTTGTT+TGG 0.242457 2:-6131712 MsG0280006783.01.T01:CDS
CTGGAAGGCACAACTTCTTT+TGG 0.244577 2:-6128161 MsG0280006783.01.T01:CDS
AGGCATCAAGGCATAATAAT+AGG 0.252606 2:-6128997 MsG0280006783.01.T01:CDS
CTTGCAAGGTCAAGAAATTA+TGG 0.253844 2:-6128710 MsG0280006783.01.T01:CDS
ACAACAATGCTTCCTTTCTT+TGG 0.260385 2:+6131651 None:intergenic
GTTCTGTTTGTTTGGAGCTT+TGG 0.278338 2:-6131704 MsG0280006783.01.T01:CDS
GGATTGGAGCGTCAGACTTT+GGG 0.304165 2:-6128756 MsG0280006783.01.T01:CDS
ACTAGCTGCCATCAGGTTAC+TGG 0.311822 2:+6128931 None:intergenic
CCCTGTAACGGCATAGGCTT+TGG 0.312124 2:-6128551 MsG0280006783.01.T01:CDS
ACCAAAGCCTATGCCGTTAC+AGG 0.314128 2:+6128550 None:intergenic
GCTAGTCCACTAGATAAAAT+AGG 0.316462 2:+6128185 None:intergenic
CTTGACCTTGCAAGACCTTT+CGG 0.326370 2:+6128719 None:intergenic
TTGAGCATTAATACTGTCAT+AGG 0.327410 2:+6128675 None:intergenic
TGCCATCAGGTTACTGGAAT+TGG 0.331969 2:+6128937 None:intergenic
TTTGATCCTGGCCATCTAAC+AGG 0.335220 2:+6129540 None:intergenic
AGGAGGCATTTGCTCACAAC+TGG 0.344623 2:-6130211 MsG0280006783.01.T01:CDS
TTGAAAAGTTCTGGTTCCTT+TGG 0.345700 2:-6130003 MsG0280006783.01.T01:CDS
CTTGTTGGTTCCTGAAAATC+AGG 0.346782 2:-6131194 MsG0280006783.01.T01:intron
GAAGAAGAAATAGCTGAATA+TGG 0.353827 2:+6131804 None:intergenic
ATTCTGCTGGAATGAGGTTC+AGG 0.356740 2:-6129716 MsG0280006783.01.T01:CDS
CTTAGAAAATTACTTGGAAC+TGG 0.358853 2:+6128863 None:intergenic
TCATACCGAGAGTTTGAAAC+TGG 0.364947 2:+6128278 None:intergenic
GGTTCCTTTGGAGGGTCCTC+TGG 0.378058 2:-6129991 MsG0280006783.01.T01:CDS
GCGGTGCAGTTGAAAAGTTC+TGG 0.379713 2:-6130012 MsG0280006783.01.T01:CDS
ATCAAAATGGAAATGCCTAT+TGG 0.380196 2:-6129523 MsG0280006783.01.T01:intron
GGGATTGGAGCGTCAGACTT+TGG 0.382193 2:-6128757 MsG0280006783.01.T01:CDS
CTTGATTGTTCTTATTCTGC+TGG 0.385178 2:-6129729 MsG0280006783.01.T01:CDS
TCATAATAATAATAATTTGT+TGG 0.385376 2:-6128127 MsG0280006783.01.T01:CDS
TGAGAGTCTTGCAGAACATA+TGG 0.388643 2:+6130745 None:intergenic
TGATAATATTAATCTCAATC+AGG 0.389378 2:-6128258 MsG0280006783.01.T01:CDS
GCAAGTGGAGCAAAATGTTC+GGG 0.402501 2:-6130832 MsG0280006783.01.T01:CDS
AAAAGTTCTGGTTCCTTTGG+AGG 0.403391 2:-6130000 MsG0280006783.01.T01:CDS
AGGGTCCTCTGGTATGCAAT+TGG 0.407086 2:-6129980 MsG0280006783.01.T01:CDS
GAGCTTTGGCATGCTTGTGC+TGG 0.408044 2:-6131690 MsG0280006783.01.T01:CDS
CCAATGCTCGGGTCCAGAAA+TGG 0.411902 2:-6128407 MsG0280006783.01.T01:CDS
TTGATCTCTTTACCAAAGAA+AGG 0.420423 2:-6131663 MsG0280006783.01.T01:CDS
GGAGGTTCCGGCATATATAC+AGG 0.422819 2:-6130334 MsG0280006783.01.T01:CDS
CACTTCTGCTTCAGCAGCTA+TGG 0.423134 2:-6131754 MsG0280006783.01.T01:CDS
TCTGGTATGCAATTGGATCC+TGG 0.423772 2:-6129973 MsG0280006783.01.T01:CDS
TTAGATGGCCAGGATCAAAA+TGG 0.424313 2:-6129536 MsG0280006783.01.T01:CDS
TTCTAATGAGGCAGGTTCAC+TGG 0.424709 2:-6129591 MsG0280006783.01.T01:intron
AATAATAATAATTTGTTGGA+TGG 0.424748 2:-6128123 MsG0280006783.01.T01:CDS
AGCAAGTGGAGCAAAATGTT+CGG 0.428665 2:-6130833 MsG0280006783.01.T01:CDS
TTGCATGCATCTGTTACATC+TGG 0.432429 2:-6128350 MsG0280006783.01.T01:CDS
TTTATCTAGTGGACTAGCTC+TGG 0.432678 2:-6128180 MsG0280006783.01.T01:CDS
GGAATATTACAAGCAGAAAC+AGG 0.435107 2:+6131588 None:intergenic
ATAATTTGTTGGATGGTTCA+AGG 0.435195 2:-6128116 MsG0280006783.01.T01:CDS
TTTGACGAGGCCCGTGGAAG+TGG 0.439439 2:-6128455 MsG0280006783.01.T01:CDS
GGCATCAAGGCATAATAATA+GGG 0.442600 2:-6128996 MsG0280006783.01.T01:CDS
TGAAGACTGCTTTCCTCCCC+TGG 0.447036 2:-6130670 MsG0280006783.01.T01:intron
ATTGGATCCTGGCTCTCTCA+TGG 0.448332 2:-6129962 MsG0280006783.01.T01:CDS
AGGTTCACTGGATTAATTGC+TGG 0.450146 2:-6129579 MsG0280006783.01.T01:CDS
GCTCTTGTGAAGGCCTCTGC+TGG 0.456741 2:+6130387 None:intergenic
AGGATGGAGAACTGAGACTA+GGG 0.457399 2:-6130044 MsG0280006783.01.T01:CDS
CCTCCACCTCTTCCTCCTCA+AGG 0.458803 2:-6131726 MsG0280006783.01.T01:CDS
TCATCTTCTTCTTCTCACTC+TGG 0.460997 2:-6131783 MsG0280006783.01.T01:CDS
GTTGTGAGCAAATGCCTCCT+TGG 0.470083 2:+6130214 None:intergenic
ACTAGATAAAATAGGCTTGT+GGG 0.474427 2:+6128193 None:intergenic
GCAGCGTCATGCATCTGTGC+AGG 0.474941 2:+6128380 None:intergenic
TGATATATTAGGGGTGAGGA+TGG 0.479470 2:-6130060 MsG0280006783.01.T01:intron
CCATTTCTGGACCCGAGCAT+TGG 0.481294 2:+6128407 None:intergenic
TACATATCTGAAGCTAAAAG+TGG 0.482634 2:-6128230 MsG0280006783.01.T01:CDS
ATGGCTCGGAGTGGAGGTTC+CGG 0.487428 2:-6130346 MsG0280006783.01.T01:CDS
TGAATCTTTCAGATTCCAAA+AGG 0.488445 2:-6128528 MsG0280006783.01.T01:CDS
GTGGATCCTGTTAGATGGCC+AGG 0.491480 2:-6129546 MsG0280006783.01.T01:CDS
TCTTCAAACTAGCTGCCATC+AGG 0.491550 2:+6128924 None:intergenic
CCATGGGAAATCGAGCCATC+TGG 0.493386 2:-6128968 MsG0280006783.01.T01:CDS
GTTCTTATTCTGCTGGAATG+AGG 0.495749 2:-6129722 MsG0280006783.01.T01:CDS
CAGCAGAATAAGAACAATCA+AGG 0.499150 2:+6129730 None:intergenic
CTCTTCAAGAACTTGTTGAC+AGG 0.502590 2:+6129753 None:intergenic
CAGCTAGTTTGAAGAGGACC+AGG 0.503820 2:-6128916 MsG0280006783.01.T01:CDS
ATCTGTGTTAATGTTCCAGC+AGG 0.504305 2:-6128309 MsG0280006783.01.T01:CDS
GCTTCTGACACTAGCACTCA+TGG 0.504325 2:-6130720 MsG0280006783.01.T01:CDS
AACGAGGCTCGTCCGTAGGG+TGG 0.505344 2:+6128476 None:intergenic
GGTTGTGTTGGACGTTATGA+TGG 0.506134 2:-6128434 MsG0280006783.01.T01:CDS
GGTAAGGTGGGATGATATAG+AGG 0.506725 2:-6129017 MsG0280006783.01.T01:CDS
ACAACATCCATGAGAGAGCC+AGG 0.507240 2:+6129955 None:intergenic
TTAATCCAGTTTCAAACTCT+CGG 0.507421 2:-6128283 MsG0280006783.01.T01:CDS
GTTTGTTTGACAGATGGGAT+TGG 0.508320 2:-6128772 MsG0280006783.01.T01:intron
AAAGTTCTGGTTCCTTTGGA+GGG 0.508492 2:-6129999 MsG0280006783.01.T01:CDS
TTGCAAGGTCAAGAAATTAT+GGG 0.510787 2:-6128709 MsG0280006783.01.T01:CDS
AGTGTATTGTCAAGTCTTGT+TGG 0.511473 2:-6131209 MsG0280006783.01.T01:CDS
AATTGATGCTGATGCGGAAG+AGG 0.519080 2:-6130802 MsG0280006783.01.T01:CDS
CCTTGAGGAGGAAGAGGTGG+AGG 0.520375 2:+6131726 None:intergenic
AGTTTGAAGAGGACCAGGAT+TGG 0.525572 2:-6128911 MsG0280006783.01.T01:CDS
GTCCAACACAACCACTTCCA+CGG 0.527880 2:+6128444 None:intergenic
AATAAGAAGAAGCTTGTGTC+TGG 0.529144 2:-6130172 MsG0280006783.01.T01:CDS
AAACTGGATTAACAGCCTGC+TGG 0.529156 2:+6128294 None:intergenic
TTAGTGTTTGCTATAATCCA+AGG 0.530357 2:-6129906 MsG0280006783.01.T01:intron
TATGATGGTTATCCAATGCT+CGG 0.531088 2:-6128419 MsG0280006783.01.T01:CDS
GCCCGTGGAAGTGGTTGTGT+TGG 0.532318 2:-6128446 MsG0280006783.01.T01:CDS
GCTCGTCCGTAGGGTGGGCA+CGG 0.538067 2:+6128482 None:intergenic
AACTGAGACTAGGGATTCGT+AGG 0.539200 2:-6130035 MsG0280006783.01.T01:CDS
TCTCATCCTTACAGGTAAGG+TGG 0.540717 2:-6129030 MsG0280006783.01.T01:intron
TGATGAAGTAAATCCAATCC+TGG 0.540978 2:+6128898 None:intergenic
AGGAAATATCAGAATGCAGC+CGG 0.542520 2:-6128588 MsG0280006783.01.T01:CDS
TTATTGATATATTAGGGGTG+AGG 0.544361 2:-6130064 MsG0280006783.01.T01:intron
GTCAAACGAGGCTCGTCCGT+AGG 0.545617 2:+6128472 None:intergenic
GAGAGTCTTGCAGAACATAT+GGG 0.546093 2:+6130746 None:intergenic
TCCAACACAACCACTTCCAC+GGG 0.546409 2:+6128445 None:intergenic
CTCATCCTTACAGGTAAGGT+GGG 0.547514 2:-6129029 MsG0280006783.01.T01:intron
CACTAGATAAAATAGGCTTG+TGG 0.548010 2:+6128192 None:intergenic
ATCTGCATGGCTCGGAGTGG+AGG 0.549415 2:-6130352 MsG0280006783.01.T01:CDS
ACAGAACCTTGAGGAGGAAG+AGG 0.550075 2:+6131720 None:intergenic
TAATAATAGGGTTTCCCCAT+GGG 0.552921 2:-6128984 MsG0280006783.01.T01:CDS
AGATTCCAAAAGGTCTTGCA+AGG 0.554960 2:-6128518 MsG0280006783.01.T01:CDS
AGTATTAATGCTCAAAGTCC+CGG 0.554973 2:-6128667 MsG0280006783.01.T01:intron
GTGATGTGGATCCTGTTAGA+TGG 0.555747 2:-6129551 MsG0280006783.01.T01:CDS
TCAAACGAGGCTCGTCCGTA+GGG 0.557969 2:+6128473 None:intergenic
GGAGCAAAATGTTCGGGAAG+GGG 0.558230 2:-6130826 MsG0280006783.01.T01:CDS
CCAGATGGCTCGATTTCCCA+TGG 0.559343 2:+6128968 None:intergenic
TTCACAAGAGCTTGTAGCAA+AGG 0.561527 2:-6130375 MsG0280006783.01.T01:CDS
GATAATATTAATCTCAATCA+GGG 0.564287 2:-6128257 MsG0280006783.01.T01:CDS
TGGAACATTAACACAGATGA+TGG 0.566397 2:+6128314 None:intergenic
GAACCTTGAGGAGGAAGAGG+TGG 0.567888 2:+6131723 None:intergenic
AGCAAAGGATCTGCATGGCT+CGG 0.568425 2:-6130360 MsG0280006783.01.T01:CDS
TGAGCATTAATACTGTCATA+GGG 0.569740 2:+6128676 None:intergenic
ATGATGGTTATCCAATGCTC+GGG 0.570161 2:-6128418 MsG0280006783.01.T01:CDS
CTGAAGATGCTGCAGAGCGA+AGG 0.573424 2:-6129680 MsG0280006783.01.T01:intron
ACGAGGCTCGTCCGTAGGGT+GGG 0.574143 2:+6128477 None:intergenic
GAGGATGGAGAACTGAGACT+AGG 0.576907 2:-6130045 MsG0280006783.01.T01:CDS
CCAAAGCCTATGCCGTTACA+GGG 0.579594 2:+6128551 None:intergenic
TTCTTTGGTAAAGAGATCAA+AGG 0.581371 2:+6131666 None:intergenic
TGATGCTGATGCGGAAGAGG+AGG 0.584498 2:-6130799 MsG0280006783.01.T01:CDS
ATTCTTCCGTGCCCACCCTA+CGG 0.589745 2:-6128488 MsG0280006783.01.T01:CDS
TGGAGCAAAATGTTCGGGAA+GGG 0.590933 2:-6130827 MsG0280006783.01.T01:CDS
AGATTCCGAAAGGTCTTGCA+AGG 0.591011 2:-6128724 MsG0280006783.01.T01:CDS
GCCTCGTTTGACGAGGCCCG+TGG 0.594609 2:-6128461 MsG0280006783.01.T01:CDS
GATTGGAGCGTCAGACTTTG+GGG 0.595092 2:-6128755 MsG0280006783.01.T01:CDS
ACATACCCCTGTATATATGC+CGG 0.602336 2:+6130327 None:intergenic
GTGGAGCAAAATGTTCGGGA+AGG 0.607985 2:-6130828 MsG0280006783.01.T01:CDS
GGGATGATATAGAGGCATCA+AGG 0.608470 2:-6129009 MsG0280006783.01.T01:CDS
TATGTGAAAATTACCAGGGG+AGG 0.608609 2:+6130657 None:intergenic
GAGGTTCCGGCATATATACA+GGG 0.610720 2:-6130333 MsG0280006783.01.T01:CDS
GGAATCATTAAGATTCCGAA+AGG 0.612567 2:-6128734 MsG0280006783.01.T01:CDS
TTCCAATTCCAGTAACCTGA+TGG 0.613226 2:-6128939 MsG0280006783.01.T01:CDS
ACTGAGACTAGGGATTCGTA+GGG 0.614609 2:-6130034 MsG0280006783.01.T01:CDS
CAGATGGCTCGATTTCCCAT+GGG 0.616656 2:+6128969 None:intergenic
CAGGGAAAATCAGAAGCCGC+CGG 0.618202 2:+6128569 None:intergenic
TTTGCTACAAGCTCTTGTGA+AGG 0.621318 2:+6130377 None:intergenic
TTTAGGATTACAGCCAGCAG+AGG 0.626599 2:-6130400 MsG0280006783.01.T01:intron
ACACGACAGAAAACATGAGG+TGG 0.628496 2:+6131567 None:intergenic
ATAATAATAGGGTTTCCCCA+TGG 0.628746 2:-6128985 MsG0280006783.01.T01:CDS
TCCACGGGCCTCGTCAAACG+AGG 0.628825 2:+6128460 None:intergenic
GGAGGCATTTGCTCACAACT+GGG 0.631966 2:-6130210 MsG0280006783.01.T01:CDS
AGGGGTAATTGATGCTGATG+CGG 0.632870 2:-6130808 MsG0280006783.01.T01:CDS
TGCTCGGGTCCAGAAATGGA+TGG 0.638360 2:-6128403 MsG0280006783.01.T01:CDS
TGATGGCAGCTAGTTTGAAG+AGG 0.639010 2:-6128922 MsG0280006783.01.T01:CDS
GAGACTAGGGATTCGTAGGG+CGG 0.640641 2:-6130031 MsG0280006783.01.T01:CDS
GATAAAATAGGCTTGTGGGA+AGG 0.641991 2:+6128197 None:intergenic
CTTGTAGCAAAGGATCTGCA+TGG 0.646829 2:-6130365 MsG0280006783.01.T01:CDS
AGGATCTGCATGGCTCGGAG+TGG 0.652171 2:-6130355 MsG0280006783.01.T01:CDS
TCTAGTGGACTAGCTCTGGA+AGG 0.652449 2:-6128176 MsG0280006783.01.T01:CDS
AATTGCTGGAATAAGTGATG+TGG 0.654162 2:-6129565 MsG0280006783.01.T01:CDS
GGCATTTGCTCACAACTGGG+TGG 0.657268 2:-6130207 MsG0280006783.01.T01:CDS
CGGACGAGCCTCGTTTGACG+AGG 0.658321 2:-6128468 MsG0280006783.01.T01:CDS
CATACCAGAGGACCCTCCAA+AGG 0.666097 2:+6129987 None:intergenic
TCGTTGGAGCAGGACAGCCA+AGG 0.673661 2:-6130231 MsG0280006783.01.T01:intron
ATTGTTGTTTATGTTCCACA+AGG 0.675688 2:-6131636 MsG0280006783.01.T01:CDS
AGGATCCAATTGCATACCAG+AGG 0.675738 2:+6129975 None:intergenic
CAGTCTTCAGCAGCTCGACG+AGG 0.676991 2:+6130684 None:intergenic
AAATATCAGAATGCAGCCGG+CGG 0.679146 2:-6128585 MsG0280006783.01.T01:CDS
AGATGGCTCGATTTCCCATG+GGG 0.681877 2:+6128970 None:intergenic
AGAACACGACAGAAAACATG+AGG 0.684027 2:+6131564 None:intergenic
TTGGAGCAGGACAGCCAAGG+AGG 0.696098 2:-6130228 MsG0280006783.01.T01:intron
GCTTGTTCAAAGTGTCCTTG+TGG 0.696713 2:+6131621 None:intergenic
AAACAAACAGAACCTTGAGG+AGG 0.697531 2:+6131714 None:intergenic
AGAGTCTTGCAGAACATATG+GGG 0.705605 2:+6130747 None:intergenic
GAATTGGAAGCAGAACCAGA+TGG 0.706161 2:+6128953 None:intergenic
AATCGATCTCAACACTACAG+AGG 0.712921 2:-6131838 MsG0280006783.01.T01:CDS
TCCAAACAAACAGAACCTTG+AGG 0.748059 2:+6131711 None:intergenic
AGGTTCCGGCATATATACAG+GGG 0.752458 2:-6130332 MsG0280006783.01.T01:intron
TCTGACACTAGCACTCATGG+AGG 0.799481 2:-6130717 MsG0280006783.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAAATTTAAATAATATA+TGG + Chr2:6130552-6130571 None:intergenic 0.0%
!! TATTAAAATTAAAAATACCT+TGG + Chr2:6130057-6130076 None:intergenic 10.0%
!!! ATTTTTTATTTTTTTGCTTT+TGG - Chr2:6128440-6128459 MsG0280006783.01.T01:CDS 10.0%
!!! GATTTTATTATTGATATATT+AGG - Chr2:6129872-6129891 MsG0280006783.01.T01:intron 10.0%
!!! TCATAATAATAATAATTTGT+TGG - Chr2:6131816-6131835 MsG0280006783.01.T01:CDS 10.0%
!!! TTTTATTATTGATATATTAG+GGG - Chr2:6129874-6129893 MsG0280006783.01.T01:intron 10.0%
!!! TTTTTTATTTTTTTGCTTTT+GGG - Chr2:6128441-6128460 MsG0280006783.01.T01:CDS 10.0%
!! TAACTTAATGAAATTGTATT+AGG - Chr2:6130483-6130502 MsG0280006783.01.T01:intron 15.0%
!!! AAAACAAAAAGTATTAAACT+TGG + Chr2:6128543-6128562 None:intergenic 15.0%
!!! AATAATAATAATTTGTTGGA+TGG - Chr2:6131820-6131839 MsG0280006783.01.T01:CDS 15.0%
!!! TTTTTATTTTTTTGCTTTTG+GGG - Chr2:6128442-6128461 MsG0280006783.01.T01:CDS 15.0%
!! AAAGATCTTAGAAAATTACT+TGG + Chr2:6131089-6131108 None:intergenic 20.0%
!! ATCCACTATTATATTACTTT+AGG - Chr2:6129526-6129545 MsG0280006783.01.T01:CDS 20.0%
!! ATCCTAAAGTAATATAATAG+TGG + Chr2:6129531-6129550 None:intergenic 20.0%
!! CAATAATAAAATCTTAGTCA+TGG + Chr2:6129865-6129884 None:intergenic 20.0%
!! CATAATAATAGATAGAATTC+AGG + Chr2:6129827-6129846 None:intergenic 20.0%
!! GAAAATTGATTATGAGAAAA+GGG - Chr2:6128502-6128521 MsG0280006783.01.T01:CDS 20.0%
!! GATAATATTAATCTCAATCA+GGG - Chr2:6131686-6131705 MsG0280006783.01.T01:CDS 20.0%
!! TGATAATATTAATCTCAATC+AGG - Chr2:6131685-6131704 MsG0280006783.01.T01:CDS 20.0%
!!! ATATTTCACCTTTTCTTTTT+AGG - Chr2:6130143-6130162 MsG0280006783.01.T01:intron 20.0%
!!! ATCTTGTTTTAGTTCATTTT+AGG - Chr2:6128793-6128812 MsG0280006783.01.T01:intron 20.0%
!!! CTTATAAATGTTTTAAAACG+TGG - Chr2:6129410-6129429 MsG0280006783.01.T01:intron 20.0%
!!! TATGATGCATTAGTTTTTTT+TGG - Chr2:6129307-6129326 MsG0280006783.01.T01:intron 20.0%
!!! TATTTCACCTTTTCTTTTTA+GGG - Chr2:6130144-6130163 MsG0280006783.01.T01:intron 20.0%
! AAACACCTATAATATGTGTT+AGG + Chr2:6130773-6130792 None:intergenic 25.0%
! AAATAAGCTAGCTAAATATG+AGG - Chr2:6130568-6130587 MsG0280006783.01.T01:intron 25.0%
! AACACCTATAATATGTGTTA+GGG + Chr2:6130772-6130791 None:intergenic 25.0%
! AAGAACAATAAACTAGGAAA+AGG + Chr2:6128622-6128641 None:intergenic 25.0%
! AATATAAATCACTACAGTGA+TGG + Chr2:6130627-6130646 None:intergenic 25.0%
! AATTACACGTATATCAGTTA+TGG + Chr2:6130334-6130353 None:intergenic 25.0%
! AATTTCTATGTTAGATATCG+TGG - Chr2:6128850-6128869 MsG0280006783.01.T01:intron 25.0%
! AGAACAATAAACTAGGAAAA+GGG + Chr2:6128621-6128640 None:intergenic 25.0%
! ATATAAATCACTACAGTGAT+GGG + Chr2:6130626-6130645 None:intergenic 25.0%
! ATATACGTGTAATTCTAATG+AGG - Chr2:6130340-6130359 MsG0280006783.01.T01:CDS 25.0%
! ATCATATGTGAAAATTACCA+GGG + Chr2:6129293-6129312 None:intergenic 25.0%
! CACAAATATGAACATATAGA+CGG - Chr2:6130696-6130715 MsG0280006783.01.T01:CDS 25.0%
! GGAAAATTGATTATGAGAAA+AGG - Chr2:6128501-6128520 MsG0280006783.01.T01:CDS 25.0%
! GGTCTTTCAAAACTAATTAA+TGG - Chr2:6130808-6130827 MsG0280006783.01.T01:CDS 25.0%
! TAATATATGGAACACATCTA+CGG + Chr2:6130539-6130558 None:intergenic 25.0%
! TCAAAACTAATTAATGGCTA+TGG - Chr2:6130814-6130833 MsG0280006783.01.T01:CDS 25.0%
! TGGTTCATTCAAACAAAAAA+AGG + Chr2:6128569-6128588 None:intergenic 25.0%
! TTCATTCAAACAAAAAAAGG+AGG + Chr2:6128566-6128585 None:intergenic 25.0%
!! TTCCTAGTTTATTGTTCTTT+TGG - Chr2:6128623-6128642 MsG0280006783.01.T01:intron 25.0%
!!! AAGTAAATTTTTAGAGCAAC+AGG - Chr2:6128875-6128894 MsG0280006783.01.T01:intron 25.0%
!!! TGATGTTTTATTATAGCAAG+TGG - Chr2:6129096-6129115 MsG0280006783.01.T01:intron 25.0%
AAACTAATTAATGGCTATGG+AGG - Chr2:6130817-6130836 MsG0280006783.01.T01:CDS 30.0%
AATTCGTTTGTTTGACAGAT+GGG - Chr2:6131166-6131185 MsG0280006783.01.T01:intron 30.0%
ACTAGATAAAATAGGCTTGT+GGG + Chr2:6131753-6131772 None:intergenic 30.0%
AGTATAGTCAGTTATTCCTT+TGG - Chr2:6129486-6129505 MsG0280006783.01.T01:intron 30.0%
ATCAAAATGGAAATGCCTAT+TGG - Chr2:6130420-6130439 MsG0280006783.01.T01:intron 30.0%
CAAATTCATAATGCTACCAA+AGG + Chr2:6129505-6129524 None:intergenic 30.0%
CAACAATGAAAAGGAAAGAA+GGG + Chr2:6130093-6130112 None:intergenic 30.0%
CATCATATGTGAAAATTACC+AGG + Chr2:6129294-6129313 None:intergenic 30.0%
CTCCAAAAGAACAATAAACT+AGG + Chr2:6128628-6128647 None:intergenic 30.0%
CTTAGAAAATTACTTGGAAC+TGG + Chr2:6131083-6131102 None:intergenic 30.0%
CTTGGATGAAATTGTGAAAA+AGG - Chr2:6128816-6128835 MsG0280006783.01.T01:intron 30.0%
GAAACCCTAACACATATTAT+AGG - Chr2:6130765-6130784 MsG0280006783.01.T01:CDS 30.0%
GAAGAAGAAATAGCTGAATA+TGG + Chr2:6128142-6128161 None:intergenic 30.0%
GTATGTAGAATTTCATGAAC+AGG - Chr2:6130652-6130671 MsG0280006783.01.T01:intron 30.0%
TATAAATCACTACAGTGATG+GGG + Chr2:6130625-6130644 None:intergenic 30.0%
TCATATGTGAAAATTACCAG+GGG + Chr2:6129292-6129311 None:intergenic 30.0%
TGAATCTTTCAGATTCCAAA+AGG - Chr2:6131415-6131434 MsG0280006783.01.T01:intron 30.0%
TGAGCATTAATACTGTCATA+GGG + Chr2:6131270-6131289 None:intergenic 30.0%
TTAATCCAGTTTCAAACTCT+CGG - Chr2:6131660-6131679 MsG0280006783.01.T01:CDS 30.0%
TTATTGATATATTAGGGGTG+AGG - Chr2:6129879-6129898 MsG0280006783.01.T01:intron 30.0%
TTCTTTGGTAAAGAGATCAA+AGG + Chr2:6128280-6128299 None:intergenic 30.0%
TTGAGCATTAATACTGTCAT+AGG + Chr2:6131271-6131290 None:intergenic 30.0%
TTGATCTCTTTACCAAAGAA+AGG - Chr2:6128280-6128299 MsG0280006783.01.T01:CDS 30.0%
TTGCAAGGTCAAGAAATTAT+GGG - Chr2:6131234-6131253 MsG0280006783.01.T01:intron 30.0%
TTTGAAAGACCAGTTAACTA+TGG + Chr2:6130799-6130818 None:intergenic 30.0%
! AACCATAATGTGCTTTTGAT+TGG - Chr2:6128584-6128603 MsG0280006783.01.T01:CDS 30.0%
! TACATATCTGAAGCTAAAAG+TGG - Chr2:6131713-6131732 MsG0280006783.01.T01:CDS 30.0%
! TAGGTTTTTGTGCTTTTGTT+TGG - Chr2:6128467-6128486 MsG0280006783.01.T01:CDS 30.0%
! TTTTTGTTCTTGCTTAGCTT+TGG - Chr2:6130729-6130748 MsG0280006783.01.T01:CDS 30.0%
!! ATAATTTGTTGGATGGTTCA+AGG - Chr2:6131827-6131846 MsG0280006783.01.T01:CDS 30.0%
!! ATTGTTGTTTATGTTCCACA+AGG - Chr2:6128307-6128326 MsG0280006783.01.T01:CDS 30.0%
!! TTAGTGTTTGCTATAATCCA+AGG - Chr2:6130037-6130056 MsG0280006783.01.T01:CDS 30.0%
!!! GTTTTAGTTCATTTTAGGCT+TGG - Chr2:6128798-6128817 MsG0280006783.01.T01:intron 30.0%
!!! TTTTGTTTGGTCTTGTAGTT+GGG - Chr2:6128480-6128499 MsG0280006783.01.T01:CDS 30.0%
!!! TTTTTTTGCTTTTGGGGTTT+AGG - Chr2:6128448-6128467 MsG0280006783.01.T01:CDS 30.0%
AATAAGAAGAAGCTTGTGTC+TGG - Chr2:6129771-6129790 MsG0280006783.01.T01:CDS 35.0%
AATGGAAATGCCTATTGGTA+TGG - Chr2:6130425-6130444 MsG0280006783.01.T01:intron 35.0%
AATTGCTGGAATAAGTGATG+TGG - Chr2:6130378-6130397 MsG0280006783.01.T01:CDS 35.0%
ACAACAATGCTTCCTTTCTT+TGG + Chr2:6128295-6128314 None:intergenic 35.0%
AGGCATCAAGGCATAATAAT+AGG - Chr2:6130946-6130965 MsG0280006783.01.T01:intron 35.0%
AGTATTAATGCTCAAAGTCC+CGG - Chr2:6131276-6131295 MsG0280006783.01.T01:intron 35.0%
ATAATAATAGGGTTTCCCCA+TGG - Chr2:6130958-6130977 MsG0280006783.01.T01:intron 35.0%
ATGTTCTTTCTCATCCTTAC+AGG - Chr2:6130905-6130924 MsG0280006783.01.T01:intron 35.0%
CAAGTGCAACATAGCAAAAA+AGG + Chr2:6129382-6129401 None:intergenic 35.0%
CAATTCGTTTGTTTGACAGA+TGG - Chr2:6131165-6131184 MsG0280006783.01.T01:intron 35.0%
CACGTATATCAGTTATGGAT+AGG + Chr2:6130329-6130348 None:intergenic 35.0%
CACTAGATAAAATAGGCTTG+TGG + Chr2:6131754-6131773 None:intergenic 35.0%
CAGCAGAATAAGAACAATCA+AGG + Chr2:6130216-6130235 None:intergenic 35.0%
CTTGATTGTTCTTATTCTGC+TGG - Chr2:6130214-6130233 MsG0280006783.01.T01:CDS 35.0%
CTTGCAAGGTCAAGAAATTA+TGG - Chr2:6131233-6131252 MsG0280006783.01.T01:intron 35.0%
GAACTGACCCTAAAAAGAAA+AGG + Chr2:6130154-6130173 None:intergenic 35.0%
GCAACAATGAAAAGGAAAGA+AGG + Chr2:6130094-6130113 None:intergenic 35.0%
GCTAGTCCACTAGATAAAAT+AGG + Chr2:6131761-6131780 None:intergenic 35.0%
GGAATATTACAAGCAGAAAC+AGG + Chr2:6128358-6128377 None:intergenic 35.0%
GGAATCATTAAGATTCCGAA+AGG - Chr2:6131209-6131228 MsG0280006783.01.T01:CDS 35.0%
GGCATCAAGGCATAATAATA+GGG - Chr2:6130947-6130966 MsG0280006783.01.T01:intron 35.0%
GTCAATGAAAAACTAGAGCA+AGG + Chr2:6129342-6129361 None:intergenic 35.0%
TAATAATAGGGTTTCCCCAT+GGG - Chr2:6130959-6130978 MsG0280006783.01.T01:intron 35.0%
TATGATGGTTATCCAATGCT+CGG - Chr2:6131524-6131543 MsG0280006783.01.T01:intron 35.0%
TCAAATTGTGCTTTCTGTCT+TGG - Chr2:6129448-6129467 MsG0280006783.01.T01:intron 35.0%
TGATGAAGTAAATCCAATCC+TGG + Chr2:6131048-6131067 None:intergenic 35.0%
TGGAACATTAACACAGATGA+TGG + Chr2:6131632-6131651 None:intergenic 35.0%
TTTGGAGAGACATGTATTGA+GGG - Chr2:6128641-6128660 MsG0280006783.01.T01:intron 35.0%
! AGAAAGCACAATTTGAACTC+GGG + Chr2:6129444-6129463 None:intergenic 35.0%
! AGTGTATTGTCAAGTCTTGT+TGG - Chr2:6128734-6128753 MsG0280006783.01.T01:CDS 35.0%
! ATTGAGGGAACTTTGGATTT+TGG - Chr2:6128656-6128675 MsG0280006783.01.T01:intron 35.0%
! CACAAGCCTATTTTATCTAG+TGG - Chr2:6131752-6131771 MsG0280006783.01.T01:CDS 35.0%
! CACCAATCAAAAGCACATTA+TGG + Chr2:6128589-6128608 None:intergenic 35.0%
! CAGAAAGCACAATTTGAACT+CGG + Chr2:6129445-6129464 None:intergenic 35.0%
!! CATAATGTGCTTTTGATTGG+TGG - Chr2:6128587-6128606 MsG0280006783.01.T01:CDS 35.0%
!! TTGAAAAGTTCTGGTTCCTT+TGG - Chr2:6129940-6129959 MsG0280006783.01.T01:CDS 35.0%
!! TTTTGGAGAGACATGTATTG+AGG - Chr2:6128640-6128659 MsG0280006783.01.T01:intron 35.0%
!!! CTTTTGTTTGGTCTTGTAGT+TGG - Chr2:6128479-6128498 MsG0280006783.01.T01:CDS 35.0%
!!! TCTTTTTAGGGTCAGTTCTT+CGG - Chr2:6130156-6130175 MsG0280006783.01.T01:CDS 35.0%
AAACAAACAGAACCTTGAGG+AGG + Chr2:6128232-6128251 None:intergenic 40.0%
AATCGATCTCAACACTACAG+AGG - Chr2:6128105-6128124 MsG0280006783.01.T01:CDS 40.0%
ACATACCCCTGTATATATGC+CGG + Chr2:6129619-6129638 None:intergenic 40.0%
ACGTGTAATTCTAATGAGGC+AGG - Chr2:6130344-6130363 MsG0280006783.01.T01:CDS 40.0%
AGAACACGACAGAAAACATG+AGG + Chr2:6128382-6128401 None:intergenic 40.0%
AGAGTCTTGCAGAACATATG+GGG + Chr2:6129199-6129218 None:intergenic 40.0%
AGATTCCAAAAGGTCTTGCA+AGG - Chr2:6131425-6131444 MsG0280006783.01.T01:intron 40.0%
AGCAAGTGGAGCAAAATGTT+CGG - Chr2:6129110-6129129 MsG0280006783.01.T01:intron 40.0%
AGGAAATATCAGAATGCAGC+CGG - Chr2:6131355-6131374 MsG0280006783.01.T01:intron 40.0%
AGGTTCACTGGATTAATTGC+TGG - Chr2:6130364-6130383 MsG0280006783.01.T01:CDS 40.0%
ATCTGTGTTAATGTTCCAGC+AGG - Chr2:6131634-6131653 MsG0280006783.01.T01:CDS 40.0%
ATGATGGTTATCCAATGCTC+GGG - Chr2:6131525-6131544 MsG0280006783.01.T01:intron 40.0%
CTCCTGCAATAACATGCATA+TGG + Chr2:6128989-6129008 None:intergenic 40.0%
CTTTCTCATCCTTACAGGTA+AGG - Chr2:6130910-6130929 MsG0280006783.01.T01:intron 40.0%
GACATGTATTGAGGGAACTT+TGG - Chr2:6128649-6128668 MsG0280006783.01.T01:intron 40.0%
GAGAGTCTTGCAGAACATAT+GGG + Chr2:6129200-6129219 None:intergenic 40.0%
GAGCAACAGGCTAATTGTAT+TGG - Chr2:6128888-6128907 MsG0280006783.01.T01:CDS 40.0%
GATAAAATAGGCTTGTGGGA+AGG + Chr2:6131749-6131768 None:intergenic 40.0%
GTCCATATGCATGTTATTGC+AGG - Chr2:6128984-6129003 MsG0280006783.01.T01:CDS 40.0%
GTGTTTCAGCCATAGTTAAC+TGG - Chr2:6130787-6130806 MsG0280006783.01.T01:CDS 40.0%
GTTCTTATTCTGCTGGAATG+AGG - Chr2:6130221-6130240 MsG0280006783.01.T01:CDS 40.0%
GTTTGTTTGACAGATGGGAT+TGG - Chr2:6131171-6131190 MsG0280006783.01.T01:intron 40.0%
TAAGCGTTCAATGACACAAC+TGG + Chr2:6129673-6129692 None:intergenic 40.0%
TATGTGAAAATTACCAGGGG+AGG + Chr2:6129289-6129308 None:intergenic 40.0%
TCATCTTCTTCTTCTCACTC+TGG - Chr2:6128160-6128179 MsG0280006783.01.T01:CDS 40.0%
TCCAAACAAACAGAACCTTG+AGG + Chr2:6128235-6128254 None:intergenic 40.0%
TCCTCAAGGTTCTGTTTGTT+TGG - Chr2:6128231-6128250 MsG0280006783.01.T01:CDS 40.0%
TGAGAGTCTTGCAGAACATA+TGG + Chr2:6129201-6129220 None:intergenic 40.0%
TGATATATTAGGGGTGAGGA+TGG - Chr2:6129883-6129902 MsG0280006783.01.T01:intron 40.0%
TTAGATGGCCAGGATCAAAA+TGG - Chr2:6130407-6130426 MsG0280006783.01.T01:intron 40.0%
TTCACAAGAGCTTGTAGCAA+AGG - Chr2:6129568-6129587 MsG0280006783.01.T01:CDS 40.0%
TTCCAATTCCAGTAACCTGA+TGG - Chr2:6131004-6131023 MsG0280006783.01.T01:intron 40.0%
TTGCATGCATCTGTTACATC+TGG - Chr2:6131593-6131612 MsG0280006783.01.T01:CDS 40.0%
TTTGCTACAAGCTCTTGTGA+AGG + Chr2:6129569-6129588 None:intergenic 40.0%
! AGTTGTGTCATTGAACGCTT+AGG - Chr2:6129672-6129691 MsG0280006783.01.T01:intron 40.0%
! ATAAGCCTCACCTGATTTTC+AGG + Chr2:6128762-6128781 None:intergenic 40.0%
! GCTTCTGATTTTCCCTGTAA+CGG - Chr2:6131380-6131399 MsG0280006783.01.T01:intron 40.0%
! GTTCTGTTTGTTTGGAGCTT+TGG - Chr2:6128239-6128258 MsG0280006783.01.T01:CDS 40.0%
! GTTGTGTCATTGAACGCTTA+GGG - Chr2:6129673-6129692 MsG0280006783.01.T01:intron 40.0%
! GTTTGATTTCCTGTGTTCGT+TGG - Chr2:6129696-6129715 MsG0280006783.01.T01:CDS 40.0%
! TCATACCGAGAGTTTGAAAC+TGG + Chr2:6131668-6131687 None:intergenic 40.0%
! TTGTGTCATTGAACGCTTAG+GGG - Chr2:6129674-6129693 MsG0280006783.01.T01:intron 40.0%
!! AAAAGTTCTGGTTCCTTTGG+AGG - Chr2:6129943-6129962 MsG0280006783.01.T01:CDS 40.0%
!! AAAGTTCTGGTTCCTTTGGA+GGG - Chr2:6129944-6129963 MsG0280006783.01.T01:CDS 40.0%
!! AGGCATTTCCATTTTGATCC+TGG + Chr2:6130418-6130437 None:intergenic 40.0%
!! CTCTTCAAGAACTTGTTGAC+AGG + Chr2:6130193-6130212 None:intergenic 40.0%
!! CTTGTTGGTTCCTGAAAATC+AGG - Chr2:6128749-6128768 MsG0280006783.01.T01:CDS 40.0%
!! GTGATGCTGTGTTGTTTCTT+AGG - Chr2:6129793-6129812 MsG0280006783.01.T01:intron 40.0%
!! TTTATCTAGTGGACTAGCTC+TGG - Chr2:6131763-6131782 MsG0280006783.01.T01:CDS 40.0%
!!! TGCTTGTGCTTTTTCTGTGT+AGG - Chr2:6128692-6128711 MsG0280006783.01.T01:CDS 40.0%
AAACTGGATTAACAGCCTGC+TGG + Chr2:6131652-6131671 None:intergenic 45.0%
AAATATCAGAATGCAGCCGG+CGG - Chr2:6131358-6131377 MsG0280006783.01.T01:intron 45.0%
AACTGAGACTAGGGATTCGT+AGG - Chr2:6129908-6129927 MsG0280006783.01.T01:CDS 45.0%
AAGTCCCGGTTATATGAGGT+AGG - Chr2:6131290-6131309 MsG0280006783.01.T01:intron 45.0%
AATCCCGGAACAGTTTGAAC+CGG + Chr2:6131327-6131346 None:intergenic 45.0%
AATTGATGCTGATGCGGAAG+AGG - Chr2:6129141-6129160 MsG0280006783.01.T01:intron 45.0%
ACACGACAGAAAACATGAGG+TGG + Chr2:6128379-6128398 None:intergenic 45.0%
ACCTCCCTACCTCATATAAC+CGG + Chr2:6131298-6131317 None:intergenic 45.0%
ACTGAGACTAGGGATTCGTA+GGG - Chr2:6129909-6129928 MsG0280006783.01.T01:CDS 45.0%
AGATTCCGAAAGGTCTTGCA+AGG - Chr2:6131219-6131238 MsG0280006783.01.T01:CDS 45.0%
AGGATCCAATTGCATACCAG+AGG + Chr2:6129971-6129990 None:intergenic 45.0%
AGGATGGAGAACTGAGACTA+GGG - Chr2:6129899-6129918 MsG0280006783.01.T01:intron 45.0%
AGGGGTAATTGATGCTGATG+CGG - Chr2:6129135-6129154 MsG0280006783.01.T01:intron 45.0%
AGGTTCCGGCATATATACAG+GGG - Chr2:6129611-6129630 MsG0280006783.01.T01:intron 45.0%
AGTCCCGGTTATATGAGGTA+GGG - Chr2:6131291-6131310 MsG0280006783.01.T01:intron 45.0%
AGTTTGAAGAGGACCAGGAT+TGG - Chr2:6131032-6131051 MsG0280006783.01.T01:intron 45.0%
ATCATCCCACCTTACCTGTA+AGG + Chr2:6130922-6130941 None:intergenic 45.0%
ATTCTGCTGGAATGAGGTTC+AGG - Chr2:6130227-6130246 MsG0280006783.01.T01:intron 45.0%
ATTTCCTGTTGCAGCAATCC+CGG + Chr2:6131342-6131361 None:intergenic 45.0%
CACAGCGAGCAACAATGAAA+AGG + Chr2:6130102-6130121 None:intergenic 45.0%
CTCAAAGTCCCGGTTATATG+AGG - Chr2:6131286-6131305 MsG0280006783.01.T01:intron 45.0%
CTCATCCTTACAGGTAAGGT+GGG - Chr2:6130914-6130933 MsG0280006783.01.T01:intron 45.0%
CTTGACCTTGCAAGACCTTT+CGG + Chr2:6131227-6131246 None:intergenic 45.0%
CTTGTAGCAAAGGATCTGCA+TGG - Chr2:6129578-6129597 MsG0280006783.01.T01:CDS 45.0%
GAATTGGAAGCAGAACCAGA+TGG + Chr2:6130993-6131012 None:intergenic 45.0%
GAGGTTCCGGCATATATACA+GGG - Chr2:6129610-6129629 MsG0280006783.01.T01:intron 45.0%
GCAAGTGGAGCAAAATGTTC+GGG - Chr2:6129111-6129130 MsG0280006783.01.T01:intron 45.0%
GCACAATTTGAACTCGGGTA+AGG + Chr2:6129439-6129458 None:intergenic 45.0%
GGTAAGGTGGGATGATATAG+AGG - Chr2:6130926-6130945 MsG0280006783.01.T01:intron 45.0%
GGTTGTGTTGGACGTTATGA+TGG - Chr2:6131509-6131528 MsG0280006783.01.T01:intron 45.0%
GTGATGTGGATCCTGTTAGA+TGG - Chr2:6130392-6130411 MsG0280006783.01.T01:CDS 45.0%
TATCCCGGTTCAAACTGTTC+CGG - Chr2:6131320-6131339 MsG0280006783.01.T01:intron 45.0%
TCTCATCCTTACAGGTAAGG+TGG - Chr2:6130913-6130932 MsG0280006783.01.T01:intron 45.0%
TCTGGTATGCAATTGGATCC+TGG - Chr2:6129970-6129989 MsG0280006783.01.T01:CDS 45.0%
TCTTCAAACTAGCTGCCATC+AGG + Chr2:6131022-6131041 None:intergenic 45.0%
TGCCATCAGGTTACTGGAAT+TGG + Chr2:6131009-6131028 None:intergenic 45.0%
TGGAGCAAAATGTTCGGGAA+GGG - Chr2:6129116-6129135 MsG0280006783.01.T01:intron 45.0%
TGGTTCCTGAAAATCAGGTG+AGG - Chr2:6128754-6128773 MsG0280006783.01.T01:CDS 45.0%
TGTGTCAATGTTGTCGCATG+AGG + Chr2:6131147-6131166 None:intergenic 45.0%
TTCTAATGAGGCAGGTTCAC+TGG - Chr2:6130352-6130371 MsG0280006783.01.T01:CDS 45.0%
TTTGATCCTGGCCATCTAAC+AGG + Chr2:6130406-6130425 None:intergenic 45.0%
! CTTGACCTTGCAAGACCTTT+TGG + Chr2:6131227-6131246 None:intergenic 45.0%
! CTTTTCATTGTTGCTCGCTG+TGG - Chr2:6130100-6130119 MsG0280006783.01.T01:intron 45.0%
! GATTTTCCCTGTAACGGCAT+AGG - Chr2:6131386-6131405 MsG0280006783.01.T01:intron 45.0%
! GCTTGTTCAAAGTGTCCTTG+TGG + Chr2:6128325-6128344 None:intergenic 45.0%
! TGATGGCAGCTAGTTTGAAG+AGG - Chr2:6131021-6131040 MsG0280006783.01.T01:intron 45.0%
! TTTAGGATTACAGCCAGCAG+AGG - Chr2:6129543-6129562 MsG0280006783.01.T01:CDS 45.0%
! TTTTCTGTGTAGGCTGAGGA+AGG - Chr2:6128702-6128721 MsG0280006783.01.T01:CDS 45.0%
!! CTGGAAGGCACAACTTCTTT+TGG - Chr2:6131782-6131801 MsG0280006783.01.T01:CDS 45.0%
!! GGGATGATATAGAGGCATCA+AGG - Chr2:6130934-6130953 MsG0280006783.01.T01:intron 45.0%
!!! TGCTTTTTCTGTGTAGGCTG+AGG - Chr2:6128698-6128717 MsG0280006783.01.T01:CDS 45.0%
!!! ATTTTATTATTGATATATTA+GGG - Chr2:6129873-6129892 MsG0280006783.01.T01:intron 5.0%
AATGTTGTCGCATGAGGACG+AGG + Chr2:6131141-6131160 None:intergenic 50.0%
ACAACATCCATGAGAGAGCC+AGG + Chr2:6129991-6130010 None:intergenic 50.0%
ACAGAACCTTGAGGAGGAAG+AGG + Chr2:6128226-6128245 None:intergenic 50.0%
ACCAAAGCCTATGCCGTTAC+AGG + Chr2:6131396-6131415 None:intergenic 50.0%
ACTAGCTGCCATCAGGTTAC+TGG + Chr2:6131015-6131034 None:intergenic 50.0%
AGATGGCTCGATTTCCCATG+GGG + Chr2:6130976-6130995 None:intergenic 50.0%
AGCAAAGGATCTGCATGGCT+CGG - Chr2:6129583-6129602 MsG0280006783.01.T01:intron 50.0%
AGGGTCCTCTGGTATGCAAT+TGG - Chr2:6129963-6129982 MsG0280006783.01.T01:CDS 50.0%
ATCCCGGAACAGTTTGAACC+GGG + Chr2:6131326-6131345 None:intergenic 50.0%
ATCCCGGTTCAAACTGTTCC+GGG - Chr2:6131321-6131340 MsG0280006783.01.T01:intron 50.0%
CACTTCTGCTTCAGCAGCTA+TGG - Chr2:6128189-6128208 MsG0280006783.01.T01:CDS 50.0%
CAGATGGCTCGATTTCCCAT+GGG + Chr2:6130977-6130996 None:intergenic 50.0%
CCAAAGCCTATGCCGTTACA+GGG + Chr2:6131395-6131414 None:intergenic 50.0%
CCTCCCTACCTCATATAACC+GGG + Chr2:6131297-6131316 None:intergenic 50.0%
GACCACAGCTCCATACCAAT+AGG + Chr2:6130438-6130457 None:intergenic 50.0%
GAGGATGGAGAACTGAGACT+AGG - Chr2:6129898-6129917 MsG0280006783.01.T01:intron 50.0%
GCGGTGCAGTTGAAAAGTTC+TGG - Chr2:6129931-6129950 MsG0280006783.01.T01:CDS 50.0%
GCTTCTGACACTAGCACTCA+TGG - Chr2:6129223-6129242 MsG0280006783.01.T01:intron 50.0%
GGAGCAAAATGTTCGGGAAG+GGG - Chr2:6129117-6129136 MsG0280006783.01.T01:intron 50.0%
GGAGGTTCCGGCATATATAC+AGG - Chr2:6129609-6129628 MsG0280006783.01.T01:intron 50.0%
GTCCAACACAACCACTTCCA+CGG + Chr2:6131502-6131521 None:intergenic 50.0%
GTGGAGCAAAATGTTCGGGA+AGG - Chr2:6129115-6129134 MsG0280006783.01.T01:intron 50.0%
GTTGTGAGCAAATGCCTCCT+TGG + Chr2:6129732-6129751 None:intergenic 50.0%
TCCAACACAACCACTTCCAC+GGG + Chr2:6131501-6131520 None:intergenic 50.0%
TCTGACACTAGCACTCATGG+AGG - Chr2:6129226-6129245 MsG0280006783.01.T01:intron 50.0%
TGCCTATTGGTATGGAGCTG+TGG - Chr2:6130433-6130452 MsG0280006783.01.T01:intron 50.0%
TTTCCTGTGTTCGTTGGAGC+AGG - Chr2:6129702-6129721 MsG0280006783.01.T01:CDS 50.0%
! ATTGGATCCTGGCTCTCTCA+TGG - Chr2:6129981-6130000 MsG0280006783.01.T01:CDS 50.0%
! CAGCTAGTTTGAAGAGGACC+AGG - Chr2:6131027-6131046 MsG0280006783.01.T01:intron 50.0%
! GATTGGAGCGTCAGACTTTG+GGG - Chr2:6131188-6131207 MsG0280006783.01.T01:intron 50.0%
! GGATTGGAGCGTCAGACTTT+GGG - Chr2:6131187-6131206 MsG0280006783.01.T01:intron 50.0%
!! AGGAGGCATTTGCTCACAAC+TGG - Chr2:6129732-6129751 MsG0280006783.01.T01:CDS 50.0%
!! GGAGGCATTTGCTCACAACT+GGG - Chr2:6129733-6129752 MsG0280006783.01.T01:CDS 50.0%
!! TCTAGTGGACTAGCTCTGGA+AGG - Chr2:6131767-6131786 MsG0280006783.01.T01:CDS 50.0%
AGCAGCACATTAGAGGGCAG+GGG + Chr2:6130601-6130620 None:intergenic 55.0%
ATGGGGCAGCAGCACATTAG+AGG + Chr2:6130608-6130627 None:intergenic 55.0%
ATTCTTCCGTGCCCACCCTA+CGG - Chr2:6131455-6131474 MsG0280006783.01.T01:intron 55.0%
CAGCAGCACATTAGAGGGCA+GGG + Chr2:6130602-6130621 None:intergenic 55.0%
CAGGGAAAATCAGAAGCCGC+CGG + Chr2:6131377-6131396 None:intergenic 55.0%
CATACCAGAGGACCCTCCAA+AGG + Chr2:6129959-6129978 None:intergenic 55.0%
CCAATGCTCGGGTCCAGAAA+TGG - Chr2:6131536-6131555 MsG0280006783.01.T01:intron 55.0%
CCAGATGGCTCGATTTCCCA+TGG + Chr2:6130978-6130997 None:intergenic 55.0%
CCATGGGAAATCGAGCCATC+TGG - Chr2:6130975-6130994 MsG0280006783.01.T01:intron 55.0%
CCCGGTTATATGAGGTAGGG+AGG - Chr2:6131294-6131313 MsG0280006783.01.T01:intron 55.0%
CCCTGTAACGGCATAGGCTT+TGG - Chr2:6131392-6131411 MsG0280006783.01.T01:intron 55.0%
CGCATGAGGACGAGGTAAGA+TGG + Chr2:6131133-6131152 None:intergenic 55.0%
CTGAAGATGCTGCAGAGCGA+AGG - Chr2:6130263-6130282 MsG0280006783.01.T01:intron 55.0%
CTGTGCAGGCCATCCATTTC+TGG + Chr2:6131552-6131571 None:intergenic 55.0%
GAACCTTGAGGAGGAAGAGG+TGG + Chr2:6128223-6128242 None:intergenic 55.0%
GAGACTAGGGATTCGTAGGG+CGG - Chr2:6129912-6129931 MsG0280006783.01.T01:CDS 55.0%
GGCATTTGCTCACAACTGGG+TGG - Chr2:6129736-6129755 MsG0280006783.01.T01:CDS 55.0%
GTGGATCCTGTTAGATGGCC+AGG - Chr2:6130397-6130416 MsG0280006783.01.T01:CDS 55.0%
TCAAACGAGGCTCGTCCGTA+GGG + Chr2:6131473-6131492 None:intergenic 55.0%
TGAAGACTGCTTTCCTCCCC+TGG - Chr2:6129273-6129292 MsG0280006783.01.T01:intron 55.0%
TGATGCTGATGCGGAAGAGG+AGG - Chr2:6129144-6129163 MsG0280006783.01.T01:intron 55.0%
TGCTCGGGTCCAGAAATGGA+TGG - Chr2:6131540-6131559 MsG0280006783.01.T01:intron 55.0%
TGGGGCAGCAGCACATTAGA+GGG + Chr2:6130607-6130626 None:intergenic 55.0%
TGTCCTGCTCCAACGAACAC+AGG + Chr2:6129708-6129727 None:intergenic 55.0%
TGTTCCGGGATTGCTGCAAC+AGG - Chr2:6131335-6131354 MsG0280006783.01.T01:intron 55.0%
! CCATTTCTGGACCCGAGCAT+TGG + Chr2:6131539-6131558 None:intergenic 55.0%
! GAGCTTTGGCATGCTTGTGC+TGG - Chr2:6128253-6128272 MsG0280006783.01.T01:CDS 55.0%
! GGGATTGGAGCGTCAGACTT+TGG - Chr2:6131186-6131205 MsG0280006783.01.T01:intron 55.0%
CAGTCTTCAGCAGCTCGACG+AGG + Chr2:6129262-6129281 None:intergenic 60.0%
CCTCCACCTCTTCCTCCTCA+AGG - Chr2:6128217-6128236 MsG0280006783.01.T01:CDS 60.0%
CCTTGAGGAGGAAGAGGTGG+AGG + Chr2:6128220-6128239 None:intergenic 60.0%
GCAGCACATTAGAGGGCAGG+GGG + Chr2:6130600-6130619 None:intergenic 60.0%
GCAGCAGCACATTAGAGGGC+AGG + Chr2:6130603-6130622 None:intergenic 60.0%
GCAGCGTCATGCATCTGTGC+AGG + Chr2:6131566-6131585 None:intergenic 60.0%
GCCCGTGGAAGTGGTTGTGT+TGG - Chr2:6131497-6131516 MsG0280006783.01.T01:intron 60.0%
GCTCTTGTGAAGGCCTCTGC+TGG + Chr2:6129559-6129578 None:intergenic 60.0%
GTCAAACGAGGCTCGTCCGT+AGG + Chr2:6131474-6131493 None:intergenic 60.0%
TCGTTGGAGCAGGACAGCCA+AGG - Chr2:6129712-6129731 MsG0280006783.01.T01:CDS 60.0%
TTGGAGCAGGACAGCCAAGG+AGG - Chr2:6129715-6129734 MsG0280006783.01.T01:CDS 60.0%
TTTGACGAGGCCCGTGGAAG+TGG - Chr2:6131488-6131507 MsG0280006783.01.T01:intron 60.0%
! AGGATCTGCATGGCTCGGAG+TGG - Chr2:6129588-6129607 MsG0280006783.01.T01:intron 60.0%
! ATCTGCATGGCTCGGAGTGG+AGG - Chr2:6129591-6129610 MsG0280006783.01.T01:intron 60.0%
! ATGGCTCGGAGTGGAGGTTC+CGG - Chr2:6129597-6129616 MsG0280006783.01.T01:intron 60.0%
! GGTTCCTTTGGAGGGTCCTC+TGG - Chr2:6129952-6129971 MsG0280006783.01.T01:CDS 60.0%
!! GAGGTAGGGAGGTGCTATCC+CGG - Chr2:6131305-6131324 MsG0280006783.01.T01:intron 60.0%
AACGAGGCTCGTCCGTAGGG+TGG + Chr2:6131470-6131489 None:intergenic 65.0%
ACGAGGCTCGTCCGTAGGGT+GGG + Chr2:6131469-6131488 None:intergenic 65.0%
CGGACGAGCCTCGTTTGACG+AGG - Chr2:6131475-6131494 MsG0280006783.01.T01:intron 65.0%
TCCACGGGCCTCGTCAAACG+AGG + Chr2:6131486-6131505 None:intergenic 65.0%
GCCTCGTTTGACGAGGCCCG+TGG - Chr2:6131482-6131501 MsG0280006783.01.T01:intron 70.0%
GCTCGTCCGTAGGGTGGGCA+CGG + Chr2:6131464-6131483 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 6128097 6131868 6128097 ID=MsG0280006783.01;Name=MsG0280006783.01
Chr2 mRNA 6128097 6131868 6128097 ID=MsG0280006783.01.T01;Parent=MsG0280006783.01;Name=MsG0280006783.01.T01;_AED=0.30;_eAED=0.30;_QI=0|0.8|0.63|1|1|1|11|0|628
Chr2 exon 6131548 6131868 6131548 ID=MsG0280006783.01.T01:exon:2523;Parent=MsG0280006783.01.T01
Chr2 exon 6131195 6131251 6131195 ID=MsG0280006783.01.T01:exon:2522;Parent=MsG0280006783.01.T01
Chr2 exon 6130671 6130853 6130671 ID=MsG0280006783.01.T01:exon:2521;Parent=MsG0280006783.01.T01
Chr2 exon 6130333 6130417 6130333 ID=MsG0280006783.01.T01:exon:2520;Parent=MsG0280006783.01.T01
Chr2 exon 6130151 6130241 6130151 ID=MsG0280006783.01.T01:exon:2519;Parent=MsG0280006783.01.T01
Chr2 exon 6129907 6130071 6129907 ID=MsG0280006783.01.T01:exon:2518;Parent=MsG0280006783.01.T01
Chr2 exon 6129681 6129800 6129681 ID=MsG0280006783.01.T01:exon:2517;Parent=MsG0280006783.01.T01
Chr2 exon 6129524 6129599 6129524 ID=MsG0280006783.01.T01:exon:2516;Parent=MsG0280006783.01.T01
Chr2 exon 6128876 6129038 6128876 ID=MsG0280006783.01.T01:exon:2515;Parent=MsG0280006783.01.T01
Chr2 exon 6128668 6128781 6128668 ID=MsG0280006783.01.T01:exon:2514;Parent=MsG0280006783.01.T01
Chr2 exon 6128097 6128608 6128097 ID=MsG0280006783.01.T01:exon:2513;Parent=MsG0280006783.01.T01
Chr2 CDS 6131548 6131868 6131548 ID=MsG0280006783.01.T01:cds;Parent=MsG0280006783.01.T01
Chr2 CDS 6131195 6131251 6131195 ID=MsG0280006783.01.T01:cds;Parent=MsG0280006783.01.T01
Chr2 CDS 6130671 6130853 6130671 ID=MsG0280006783.01.T01:cds;Parent=MsG0280006783.01.T01
Chr2 CDS 6130333 6130417 6130333 ID=MsG0280006783.01.T01:cds;Parent=MsG0280006783.01.T01
Chr2 CDS 6130151 6130241 6130151 ID=MsG0280006783.01.T01:cds;Parent=MsG0280006783.01.T01
Chr2 CDS 6129907 6130071 6129907 ID=MsG0280006783.01.T01:cds;Parent=MsG0280006783.01.T01
Chr2 CDS 6129681 6129800 6129681 ID=MsG0280006783.01.T01:cds;Parent=MsG0280006783.01.T01
Chr2 CDS 6129524 6129599 6129524 ID=MsG0280006783.01.T01:cds;Parent=MsG0280006783.01.T01
Chr2 CDS 6128876 6129038 6128876 ID=MsG0280006783.01.T01:cds;Parent=MsG0280006783.01.T01
Chr2 CDS 6128668 6128781 6128668 ID=MsG0280006783.01.T01:cds;Parent=MsG0280006783.01.T01
Chr2 CDS 6128097 6128608 6128097 ID=MsG0280006783.01.T01:cds;Parent=MsG0280006783.01.T01
Gene Sequence

>MsG0280006783.01.T01

ATGGGGTTAATCGATCTCAACACTACAGAGGATGATGAAACACCATATTCAGCTATTTCTTCTTCATCTTCTTCTTCTCACTCTGGTATAAGCACTTCTGCTTCAGCAGCTATGGTTGTTCCTCCACCTCTTCCTCCTCAAGGTTCTGTTTGTTTGGAGCTTTGGCATGCTTGTGCTGGTCCTTTGATCTCTTTACCAAAGAAAGGAAGCATTGTTGTTTATGTTCCACAAGGACACTTTGAACAAGCTCATGATTTTCCTGTTTCTGCTTGTAATATTCCACCTCATGTTTTCTGTCGTGTTCTTGATGTTAAGCTTCATGCTGAGGAAGGAAGTGATGAAGTGTATTGTCAAGTCTTGTTGGTTCCTGAAAATCAGCAAGTGGAGCAAAATGTTCGGGAAGGGGTAATTGATGCTGATGCGGAAGAGGAGGATACTGAAGCTATTGTGAAGTCAACAACACCCCATATGTTCTGCAAGACTCTCACAGCTTCTGACACTAGCACTCATGGAGGATTCTCAGTGCCTCGTCGAGCTGCTGAAGACTGCTTTCCTCCCCTGGATTACAGCCAGCAGAGGCCTTCACAAGAGCTTGTAGCAAAGGATCTGCATGGCTCGGAGTGGAGGTTCCGGCATATATACAGGGGACAGCCAAGGAGGCATTTGCTCACAACTGGGTGGAGTGCATTTGTTAATAAGAAGAAGCTTGTGTCTGGTGATGCTGTGTTGTTTCTTAGGGGTGAGGATGGAGAACTGAGACTAGGGATTCGTAGGGCGGTGCAGTTGAAAAGTTCTGGTTCCTTTGGAGGGTCCTCTGGTATGCAATTGGATCCTGGCTCTCTCATGGATGTTGTGAATGCTTTATCTAAAAGATCTGCATTTAGTGTTTGCTATAATCCAAGGGTCAGTTCTTCGGAATTCATCATACCTGTCAACAAGTTCTTGAAGAGCCTTGATTGTTCTTATTCTGCTGGAATGAGGTTCAGGATGCGTTTTGAAACTGAAGATGCTGCAGAGCGAAGGTTCACTGGATTAATTGCTGGAATAAGTGATGTGGATCCTGTTAGATGGCCAGGATCAAAATGGAAATGCCTATTGGTAAGGTGGGATGATATAGAGGCATCAAGGCATAATAATAGGGTTTCCCCATGGGAAATCGAGCCATCTGGTTCTGCTTCCAATTCCAGTAACCTGATGGCAGCTAGTTTGAAGAGGACCAGGATTGGATTTACTTCATCAAAGCTAGAATTTCCAGTTCCAAATGGGATTGGAGCGTCAGACTTTGGGGAATCATTAAGATTCCGAAAGGTCTTGCAAGGTCAAGAAATTATGGGCATGAATACTCCCTATGACAGTATTAATGCTCAAAGTCCCGGAAATATCAGAATGCAGCCGGCGGCTTCTGATTTTCCCTGTAACGGCATAGGCTTTGGTGAATCTTTCAGATTCCAAAAGGTCTTGCAAGGTCAAGAAATTCTTCCGTGCCCACCCTACGGACGAGCCTCGTTTGACGAGGCCCGTGGAAGTGGTTGTGTTGGACGTTATGATGGTTATCCAATGCTCGGGTCCAGAAATGGATGGCCTGCACAGATGCATGACGCTGCTTCACATTTGCATGCATCTGTTACATCTGGACAAGTTTCGTCTCCATCATCTGTGTTAATGTTCCAGCAGGCTGTTAATCCAGTTTCAAACTCTCGGTATGATAATATTAATCTCAATCAGGGTTCATACATATCTGAAGCTAAAAGTGGAATGTTTGCGCCTTCCCACAAGCCTATTTTATCTAGTGGACTAGCTCTGGAAGGCACAACTTCTTTTGGTGTGCATGATTTCATAATAATAATAATTTGTTGGATGGTTCAAGGTCTCGTGATTCAGTGTTAG

Protein sequence

>MsG0280006783.01.T01

MGLIDLNTTEDDETPYSAISSSSSSSHSGISTSASAAMVVPPPLPPQGSVCLELWHACAGPLISLPKKGSIVVYVPQGHFEQAHDFPVSACNIPPHVFCRVLDVKLHAEEGSDEVYCQVLLVPENQQVEQNVREGVIDADAEEEDTEAIVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGSEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAVQLKSSGSFGGSSGMQLDPGSLMDVVNALSKRSAFSVCYNPRVSSSEFIIPVNKFLKSLDCSYSAGMRFRMRFETEDAAERRFTGLIAGISDVDPVRWPGSKWKCLLVRWDDIEASRHNNRVSPWEIEPSGSASNSSNLMAASLKRTRIGFTSSKLEFPVPNGIGASDFGESLRFRKVLQGQEIMGMNTPYDSINAQSPGNIRMQPAASDFPCNGIGFGESFRFQKVLQGQEILPCPPYGRASFDEARGSGCVGRYDGYPMLGSRNGWPAQMHDAASHLHASVTSGQVSSPSSVLMFQQAVNPVSNSRYDNINLNQGSYISEAKSGMFAPSHKPILSSGLALEGTTSFGVHDFIIIIICWMVQGLVIQC*