AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021940.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021940.01.T01 MTR_4g079290 98.525 678 10 0 1 678 1 678 0.0 1394
MsG0480021940.01.T01 MTR_8g090375 36.893 618 343 14 82 664 68 673 8.33e-119 370
MsG0480021940.01.T01 MTR_5g012920 30.996 542 318 14 153 663 101 617 6.94e-74 251
MsG0480021940.01.T01 MTR_4g100640 29.490 529 336 13 158 663 103 617 1.78e-67 234
MsG0480021940.01.T01 MTR_4g100640 33.994 353 215 7 158 496 103 451 1.04e-58 207
MsG0480021940.01.T01 MTR_6g464330 91.803 61 5 0 73 133 1 61 2.18e-33 122
MsG0480021940.01.T01 MTR_2g033680 87.805 41 5 0 107 147 3 43 4.73e-18 79.7
MsG0480021940.01.T01 MTR_7g068850 22.788 373 240 12 100 470 79 405 1.02e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021940.01.T01 AT1G06290 71.935 677 187 2 1 676 1 675 0.0 1057
MsG0480021940.01.T01 AT1G06310 69.379 676 204 2 1 675 1 674 0.0 1014
MsG0480021940.01.T01 AT5G65110 38.017 605 333 14 97 674 95 684 2.01e-118 370
MsG0480021940.01.T01 AT5G65110 38.750 560 305 12 97 630 95 642 2.35e-113 355
MsG0480021940.01.T01 AT3G06690 65.269 167 58 0 510 676 21 187 4.04e-75 239
MsG0480021940.01.T01 AT4G16760 30.524 534 331 12 153 663 88 604 4.86e-68 235
MsG0480021940.01.T01 AT4G16760 30.755 530 335 12 153 663 101 617 5.44e-68 235
MsG0480021940.01.T01 AT2G35690 29.050 537 339 12 151 663 99 617 7.08e-64 224

Find 209 sgRNAs with CRISPR-Local

Find 411 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTCAGCTATTCGGATATT+TGG 0.062882 4:+66195031 None:intergenic
AAACCGTATTGGTCAATTTA+AGG 0.139356 4:-66193696 MsG0480021940.01.T01:CDS
TATTATTCACATTTCCTTAT+TGG 0.145717 4:+66191553 None:intergenic
ATGACAAACTCACCAGAATT+TGG 0.201015 4:+66195339 None:intergenic
GGTCACAAAATTGGTTTAAA+TGG 0.204440 4:-66195007 MsG0480021940.01.T01:CDS
CATCAAGAGCAGTGAATTTC+AGG 0.216438 4:-66192416 MsG0480021940.01.T01:intron
GCTGAATGTGGTCACAAAAT+TGG 0.219965 4:-66195016 MsG0480021940.01.T01:CDS
GGGTGGGGCTGTAAAGTTTC+TGG 0.235532 4:-66195594 MsG0480021940.01.T01:CDS
TTGGCTCTTCATGAGGTTAT+TGG 0.237880 4:-66196322 MsG0480021940.01.T01:CDS
AGCAATACTGAAAACATTTA+TGG 0.246846 4:-66192077 MsG0480021940.01.T01:CDS
AACAAACCATTTAAAGGTCT+TGG 0.280881 4:-66192496 MsG0480021940.01.T01:CDS
TTCCATCTGAATCCCTGATT+TGG 0.280970 4:+66195062 None:intergenic
CAATGTGGATAATATTTGTT+AGG 0.282218 4:-66191396 MsG0480021940.01.T01:three_prime_UTR
TCTAATCCAAGACCTTTAAA+TGG 0.282466 4:+66192490 None:intergenic
GACGCTGCCTTTCTCCGATA+TGG 0.285263 4:-66191837 MsG0480021940.01.T01:CDS
TCTCCTCTGCAGGATGTCTT+AGG 0.292318 4:-66191900 MsG0480021940.01.T01:intron
CAAATACGCAATTCGTTTCA+TGG 0.303772 4:+66196408 None:intergenic
TCAATAGGTCTCGCTCTCTT+AGG 0.305094 4:+66192292 None:intergenic
CTGAAATTCACTGCTCTTGA+TGG 0.308244 4:+66192417 None:intergenic
CTTGCCTTGGTTAACTCCTT+TGG 0.312555 4:-66191738 MsG0480021940.01.T01:CDS
GAATAATATGCGTACTCTTC+AGG 0.319191 4:-66193848 MsG0480021940.01.T01:intron
TGGATTTGATTCGGAGAGTT+CGG 0.330563 4:+66196606 None:intergenic
ATTCAGCTATTCGGATATTT+GGG 0.337889 4:+66195032 None:intergenic
GGTTTAAATGGAGTTGATAA+TGG 0.338212 4:-66194995 MsG0480021940.01.T01:CDS
GAAGATCGCGACTGGCTATT+CGG 0.342629 4:-66196532 MsG0480021940.01.T01:CDS
AAAAGTGAATTCTAGTCATT+AGG 0.348637 4:+66191512 None:intergenic
TCCATCTGAATCCCTGATTT+GGG 0.353613 4:+66195063 None:intergenic
TGAGCCCTATTGCATACAAC+TGG 0.357438 4:-66191698 MsG0480021940.01.T01:CDS
CTTTGAGATGCGAAAGCTCT+TGG 0.365539 4:-66196569 MsG0480021940.01.T01:CDS
GGAATTTAACAAATTCTCTC+TGG 0.369490 4:+66194846 None:intergenic
GGATTTGATTCGGAGAGTTC+GGG 0.370117 4:+66196607 None:intergenic
TGTGACCACATTCAGCTATT+CGG 0.372695 4:+66195023 None:intergenic
GAAACGAATTGCGTATTTGT+TGG 0.373037 4:-66196404 MsG0480021940.01.T01:CDS
CAACATAAACGGAAGCAATC+AGG 0.373818 4:-66195104 MsG0480021940.01.T01:CDS
GAATTCCAACAGCTTATTGC+AGG 0.374668 4:+66191366 None:intergenic
TCCATGGACTGGTTATAATC+AGG 0.374749 4:+66196448 None:intergenic
TTATCAGCTTGCTGAGGACT+TGG 0.379509 4:-66192119 MsG0480021940.01.T01:CDS
AACCGTATTGGTCAATTTAA+GGG 0.379544 4:-66193695 MsG0480021940.01.T01:CDS
TCTGCATGTGATTGAGGTAT+TGG 0.380289 4:-66191624 MsG0480021940.01.T01:three_prime_UTR
TTCTTAGCCCCTTTGACCTC+TGG 0.384312 4:-66194644 MsG0480021940.01.T01:CDS
TGGAGGATTGTTGGTGCGGT+TGG 0.385269 4:+66196658 None:intergenic
CCCTCTGTTGTTCCATGGAC+TGG 0.387752 4:+66196437 None:intergenic
TCAACCCAGTTGTATGCAAT+AGG 0.394427 4:+66191693 None:intergenic
AACTTCCTCAACTCTTCTTG+TGG 0.399283 4:+66196343 None:intergenic
GAGTTGATAATGGCCGTATC+TGG 0.403465 4:-66194985 MsG0480021940.01.T01:intron
AAGATCGCGACTGGCTATTC+GGG 0.408048 4:-66196531 MsG0480021940.01.T01:CDS
TGGGTCATGGCGGAGGTGAT+TGG 0.409656 4:+66196681 None:intergenic
CATTGGTATATGCAGGGGTC+AGG 0.409692 4:+66191455 None:intergenic
ACTGGGTTGAGTCAAATTCT+TGG 0.409758 4:-66191680 MsG0480021940.01.T01:CDS
GCTCTTGGACGGTCACAATC+TGG 0.413012 4:-66196554 MsG0480021940.01.T01:CDS
CATCTCCCTCTGTTGTTCCA+TGG 0.413358 4:+66196432 None:intergenic
CGAAGTTCAGCACATAGCTT+TGG 0.414228 4:+66191771 None:intergenic
AGTAAAACCTCAGGCCCATT+TGG 0.419355 4:+66194404 None:intergenic
ACTACTTATGATCCAAATTC+TGG 0.419459 4:-66195351 MsG0480021940.01.T01:CDS
AGGATTGTTGGTGCGGTTGG+TGG 0.420230 4:+66196661 None:intergenic
CATTCTCTTGCTGTTAAGCT+TGG 0.432008 4:-66196289 MsG0480021940.01.T01:CDS
CCGTGAAGCATGTGGAGGAC+AGG 0.433137 4:-66193732 MsG0480021940.01.T01:CDS
TTGGTGCGGTTGGTGGGTCA+TGG 0.434787 4:+66196668 None:intergenic
ATGATTTACCTTCAATGAAC+CGG 0.436593 4:+66192033 None:intergenic
ACTTCCTCAACTCTTCTTGT+GGG 0.444218 4:+66196344 None:intergenic
GATAATGCATTGGTATATGC+AGG 0.449447 4:+66191448 None:intergenic
GGATTGTTGGTGCGGTTGGT+GGG 0.452929 4:+66196662 None:intergenic
CTATAGCAAAACGTTTCAAT+AGG 0.454415 4:+66192277 None:intergenic
CTGTTGACAAGTATCCATAT+CGG 0.457876 4:+66191823 None:intergenic
CACCCTTAAATTGACCAATA+CGG 0.463490 4:+66193693 None:intergenic
CGTGGGTGGCTTACTGGTGA+TGG 0.467490 4:-66196367 MsG0480021940.01.T01:CDS
GAATGTTGTTGGATTTGATT+CGG 0.467551 4:+66196597 None:intergenic
CCACTTGTCATGGTGACGCT+TGG 0.472168 4:+66195568 None:intergenic
GTAGAACTTGTTAACTGAGA+TGG 0.473386 4:+66192439 None:intergenic
CCTGTCCTCCACATGCTTCA+CGG 0.473869 4:+66193732 None:intergenic
TATTGTTTCTAGTGCATACA+AGG 0.474725 4:-66193884 MsG0480021940.01.T01:CDS
TGACGTGCATTCAACATTTG+AGG 0.475703 4:-66193666 MsG0480021940.01.T01:CDS
GCTATGTCTGAGTTGGGCCA+TGG 0.475827 4:-66195506 MsG0480021940.01.T01:CDS
TCAAAGGTGTCGAATGTTGT+TGG 0.478788 4:+66196586 None:intergenic
CGGTTGGTGGGTCATGGCGG+AGG 0.480356 4:+66196674 None:intergenic
CCCATTTGGTGTAATAGAAA+AGG 0.481194 4:+66194418 None:intergenic
TTTACCAGCCGGTTCATTGA+AGG 0.481975 4:-66192041 MsG0480021940.01.T01:intron
GCCAACTGAGTTATGCTCTC+GGG 0.483404 4:-66191422 MsG0480021940.01.T01:three_prime_UTR
AATAGACGTTGTTGATGACT+TGG 0.483886 4:+66194371 None:intergenic
TTACACGACCAGAGGTCAAA+GGG 0.484386 4:+66194636 None:intergenic
GTGAGTCAGCTCAGAAGTAT+TGG 0.488256 4:-66195305 MsG0480021940.01.T01:CDS
AACATAAACGGAAGCAATCA+GGG 0.488638 4:-66195103 MsG0480021940.01.T01:CDS
AGTGAATAAGTGGGGTGTGT+GGG 0.490848 4:-66191486 MsG0480021940.01.T01:three_prime_UTR
TGAATTGCTTTGTTTGACTC+AGG 0.494253 4:+66193907 None:intergenic
AATGTATATATTACCAGATA+CGG 0.501138 4:+66194972 None:intergenic
CAACCCAGTTGTATGCAATA+GGG 0.501421 4:+66191694 None:intergenic
TACTGAAAACTATGACATCA+AGG 0.503788 4:-66195537 MsG0480021940.01.T01:CDS
GGTGAGGATGGTGGTTCGCC+AGG 0.507157 4:+66196702 None:intergenic
GCGTAGTTGTGGAGGATTGT+TGG 0.509249 4:+66196649 None:intergenic
ACTTACATCTTCGCAAGTAA+AGG 0.511759 4:+66194347 None:intergenic
TACAGAGCGGACTATTCAAC+CGG 0.511916 4:-66196501 MsG0480021940.01.T01:CDS
TGGACAACAACCGCATCACC+TGG 0.515189 4:-66196720 MsG0480021940.01.T01:CDS
GTCAAAACTGAAAACCGTAT+TGG 0.515495 4:-66193707 MsG0480021940.01.T01:CDS
GACGTGCATTCAACATTTGA+GGG 0.516195 4:-66193665 MsG0480021940.01.T01:CDS
AGCTAAGGCAAGCGTAGTTG+TGG 0.516903 4:+66196638 None:intergenic
CTATGTCTGAGTTGGGCCAT+GGG 0.517623 4:-66195505 MsG0480021940.01.T01:CDS
TCGACCGCATGCACTTGCCT+TGG 0.518895 4:-66191751 MsG0480021940.01.T01:CDS
GAATTTAACAAATTCTCTCT+GGG 0.518948 4:+66194847 None:intergenic
GGTGGGGCTGTAAAGTTTCT+GGG 0.520924 4:-66195593 MsG0480021940.01.T01:CDS
TAGTGACAGTTTCAATTCCT+CGG 0.521777 4:+66195370 None:intergenic
ATACTCCTGCAATAAGCTGT+TGG 0.526263 4:-66191371 MsG0480021940.01.T01:three_prime_UTR
ACAAGAAGAGTTGAGGAAGT+TGG 0.529170 4:-66196341 MsG0480021940.01.T01:CDS
GGTGATGCGGTTGTTGTCCA+TGG 0.532757 4:+66196723 None:intergenic
TTGAGGTATTGGATGGGGTG+TGG 0.533847 4:-66191613 MsG0480021940.01.T01:three_prime_UTR
GTTCGGGAGGAGAGTAGCTA+AGG 0.534113 4:+66196623 None:intergenic
AGAGAATTTGTTAAATTCCG+TGG 0.536973 4:-66194842 MsG0480021940.01.T01:CDS
TAGAGTCCTCACTAGAATGA+AGG 0.537714 4:+66192212 None:intergenic
CATGTGATTGAGGTATTGGA+TGG 0.541833 4:-66191620 MsG0480021940.01.T01:three_prime_UTR
ATTAATGGATTTCAGGGGTG+GGG 0.544312 4:-66195609 MsG0480021940.01.T01:intron
TTCAACCGGCGGGAAGTCGA+CGG 0.547737 4:-66196487 MsG0480021940.01.T01:CDS
GCGGAGGTGATTGGTGAGGA+TGG 0.549326 4:+66196690 None:intergenic
GTCTTCGTCCACACTAATCA+AGG 0.553624 4:+66191857 None:intergenic
AATGTGGATAATATTTGTTA+GGG 0.554004 4:-66191395 MsG0480021940.01.T01:three_prime_UTR
CAAGTATCCATATCGGAGAA+AGG 0.554145 4:+66191830 None:intergenic
CCCCGAGAGCATAACTCAGT+TGG 0.555890 4:+66191421 None:intergenic
TATCAGCTTGCTGAGGACTT+GGG 0.556480 4:-66192118 MsG0480021940.01.T01:CDS
TCAACCGGCGGGAAGTCGAC+GGG 0.556556 4:-66196486 MsG0480021940.01.T01:CDS
AAGTGAATAAGTGGGGTGTG+TGG 0.556926 4:-66191487 MsG0480021940.01.T01:three_prime_UTR
TGTGATTGAGGTATTGGATG+GGG 0.557856 4:-66191618 MsG0480021940.01.T01:three_prime_UTR
AAGATATGCATTGACAAGGC+GGG 0.561218 4:-66194441 MsG0480021940.01.T01:CDS
TGCCAACTGAGTTATGCTCT+CGG 0.562689 4:-66191423 MsG0480021940.01.T01:three_prime_UTR
CTCAATATTAATCCCTCATG+CGG 0.564423 4:-66191650 MsG0480021940.01.T01:exon
TAATCAAGCAGTAAAACCTC+AGG 0.564610 4:+66194395 None:intergenic
GCTGAGTCAGCTTTACCAGC+CGG 0.565138 4:-66192052 MsG0480021940.01.T01:CDS
CGTGAAGCATGTGGAGGACA+GGG 0.565627 4:-66193731 MsG0480021940.01.T01:CDS
GCACTCAAGTATTCACCACT+TGG 0.565645 4:+66194808 None:intergenic
CGGGTTTCTGCATGTGATTG+AGG 0.567793 4:-66191630 MsG0480021940.01.T01:three_prime_UTR
ATAGGTCTCGCTCTCTTAGG+TGG 0.569715 4:+66192295 None:intergenic
TAGCTCTCAGCCACTTGTCA+TGG 0.571188 4:+66195558 None:intergenic
ACCGGCGGGAAGTCGACGGG+AGG 0.572071 4:-66196483 MsG0480021940.01.T01:CDS
GTTAACTGAGATGGGATGAC+AGG 0.572425 4:+66192448 None:intergenic
CAGAAAATGCTTCTGTAGTG+AGG 0.573670 4:-66191803 MsG0480021940.01.T01:CDS
GTGAATAAGTGGGGTGTGTG+GGG 0.574655 4:-66191485 MsG0480021940.01.T01:three_prime_UTR
AGTTGGCATGGATAATGCAT+TGG 0.574914 4:+66191438 None:intergenic
GTTATATGCCTTGATTAGTG+TGG 0.574945 4:-66191865 MsG0480021940.01.T01:CDS
CAACAATGTTCTGATGCAGC+AGG 0.578536 4:-66193639 MsG0480021940.01.T01:intron
ACTTGGTGAAACGTCGGCCA+CGG 0.579741 4:+66194825 None:intergenic
GAGGAAGTTGGCTCTTCATG+AGG 0.581295 4:-66196329 MsG0480021940.01.T01:CDS
GTTTCAGAACATCAATCTCA+AGG 0.581478 4:-66192252 MsG0480021940.01.T01:CDS
TTTACCTTCAATGAACCGGC+TGG 0.583384 4:+66192037 None:intergenic
TTGGTGTTCATATCTTCTTG+TGG 0.583806 4:-66196270 MsG0480021940.01.T01:intron
GTTACACGACCAGAGGTCAA+AGG 0.585021 4:+66194635 None:intergenic
TCCTGATTATAACCAGTCCA+TGG 0.585729 4:-66196449 MsG0480021940.01.T01:CDS
AGAGCATAACTCAGTTGGCA+TGG 0.586717 4:+66191426 None:intergenic
CAGTTCTGTTTACATCTCCA+AGG 0.586786 4:-66194603 MsG0480021940.01.T01:intron
CAATGCATATCTTATAGCAA+TGG 0.589002 4:+66194451 None:intergenic
CAAGAGCTTTCGCATCTCAA+AGG 0.592095 4:+66196570 None:intergenic
TAGAACTTGTTAACTGAGAT+GGG 0.593873 4:+66192440 None:intergenic
GAGATGCGAAAGCTCTTGGA+CGG 0.595446 4:-66196565 MsG0480021940.01.T01:CDS
CCGGCGGGAAGTCGACGGGA+GGG 0.596367 4:-66196482 MsG0480021940.01.T01:CDS
ATTGGTATATGCAGGGGTCA+GGG 0.597775 4:+66191456 None:intergenic
ACAATCTGGAAGATCGCGAC+TGG 0.598438 4:-66196540 MsG0480021940.01.T01:CDS
GAGCGGACTATTCAACCGGC+GGG 0.599185 4:-66196497 MsG0480021940.01.T01:CDS
ATGTGATTGAGGTATTGGAT+GGG 0.599561 4:-66191619 MsG0480021940.01.T01:three_prime_UTR
ATAGACGTTGTTGATGACTT+GGG 0.603339 4:+66194372 None:intergenic
GTGGCCGACGTTTCACCAAG+TGG 0.604648 4:-66194823 MsG0480021940.01.T01:CDS
TGGTGGTTCGCCAGGTGATG+CGG 0.609405 4:+66196710 None:intergenic
TCAATATTAATCCCTCATGC+GGG 0.611986 4:-66191649 MsG0480021940.01.T01:exon
TATTACACCAAATGGGCCTG+AGG 0.613456 4:-66194411 MsG0480021940.01.T01:CDS
CAGGAATGCCGTGAAGCATG+TGG 0.614384 4:-66193740 MsG0480021940.01.T01:CDS
GAGCCCTATTGCATACAACT+GGG 0.618903 4:-66191697 MsG0480021940.01.T01:CDS
ATAATGCATTGGTATATGCA+GGG 0.619229 4:+66191449 None:intergenic
GAGGTGATTGGTGAGGATGG+TGG 0.620258 4:+66196693 None:intergenic
GTGCGGTTGGTGGGTCATGG+CGG 0.620478 4:+66196671 None:intergenic
CCAGTCCATGGAACAACAGA+GGG 0.621426 4:-66196437 MsG0480021940.01.T01:CDS
GCCCAAATCAGGGATTCAGA+TGG 0.621638 4:-66195064 MsG0480021940.01.T01:CDS
TAAGGCAAGCGTAGTTGTGG+AGG 0.621691 4:+66196641 None:intergenic
ATGGCCCACAAGAAGAGTTG+AGG 0.628054 4:-66196348 MsG0480021940.01.T01:CDS
CCCTCCCGTCGACTTCCCGC+CGG 0.629419 4:+66196482 None:intergenic
CTATAAGATATGCATTGACA+AGG 0.632074 4:-66194445 MsG0480021940.01.T01:CDS
TCAATCTCAAGGAAATAGCA+AGG 0.632456 4:-66192241 MsG0480021940.01.T01:CDS
TACTTCTGAGCTGACTCACA+CGG 0.633462 4:+66195309 None:intergenic
CACATGCAGAAACCCGCATG+AGG 0.634883 4:+66191637 None:intergenic
CCAACTGAGTTATGCTCTCG+GGG 0.635021 4:-66191421 MsG0480021940.01.T01:three_prime_UTR
ATTGCGTATTTGTTGGATCG+TGG 0.635615 4:-66196397 MsG0480021940.01.T01:CDS
CCAAGCGTCACCATGACAAG+TGG 0.636792 4:-66195568 MsG0480021940.01.T01:CDS
CTTCACATACATTACTCCCA+TGG 0.638446 4:+66195489 None:intergenic
GCTCAGAAGTATTGGATCGG+TGG 0.639509 4:-66195297 MsG0480021940.01.T01:CDS
CATTTCACTTCAGATAAGCA+AGG 0.640547 4:-66192554 MsG0480021940.01.T01:intron
AATACTGAAAACATTTATGG+AGG 0.640785 4:-66192074 MsG0480021940.01.T01:CDS
ACTGAAAACTATGACATCAA+GGG 0.641587 4:-66195536 MsG0480021940.01.T01:CDS
ACGTGCATTCAACATTTGAG+GGG 0.643157 4:-66193664 MsG0480021940.01.T01:CDS
TAATGCATTGGTATATGCAG+GGG 0.646905 4:+66191450 None:intergenic
CTAACAAATATTATCCACAT+TGG 0.648111 4:+66191397 None:intergenic
TTTGATTCGGAGAGTTCGGG+AGG 0.650263 4:+66196610 None:intergenic
CGTGCATTCAACATTTGAGG+GGG 0.650995 4:-66193663 MsG0480021940.01.T01:CDS
TCAGCTCAGAAGTATTGGAT+CGG 0.652959 4:-66195300 MsG0480021940.01.T01:CDS
GACATGCTATGTATTCTGCA+AGG 0.654350 4:+66192527 None:intergenic
CCAGAGTTATCAGCTTGCTG+AGG 0.658447 4:-66192125 MsG0480021940.01.T01:intron
ACATGCAGAAACCCGCATGA+GGG 0.659651 4:+66191638 None:intergenic
GGAGATGTAAACAGAACTGA+CGG 0.662441 4:+66194607 None:intergenic
ACATAAACGGAAGCAATCAG+GGG 0.662941 4:-66195102 MsG0480021940.01.T01:CDS
AATATCCGAATAGCTGAATG+TGG 0.664029 4:-66195028 MsG0480021940.01.T01:CDS
TTAACCAAGGCAAGTGCATG+CGG 0.664341 4:+66191747 None:intergenic
TATGCTCTCGGGGACCAATG+TGG 0.665706 4:-66191411 MsG0480021940.01.T01:three_prime_UTR
TAAGATATGCATTGACAAGG+CGG 0.666215 4:-66194442 MsG0480021940.01.T01:CDS
CTTGGATTAGAACATATGAA+CGG 0.667047 4:-66192478 MsG0480021940.01.T01:CDS
CATGGCGGAGGTGATTGGTG+AGG 0.667192 4:+66196686 None:intergenic
AAACGCATCAGGAATACCAA+AGG 0.669563 4:+66191722 None:intergenic
GAATGCCGTGAAGCATGTGG+AGG 0.676248 4:-66193737 MsG0480021940.01.T01:CDS
GGCAATAGTTACACGACCAG+AGG 0.678714 4:+66194628 None:intergenic
GTTGTGGAGGATTGTTGGTG+CGG 0.678862 4:+66196654 None:intergenic
TTCACCACTTGGTGAAACGT+CGG 0.679084 4:+66194819 None:intergenic
AGAGCGGACTATTCAACCGG+CGG 0.689517 4:-66196498 MsG0480021940.01.T01:CDS
ACCAGTCCATGGAACAACAG+AGG 0.692082 4:-66196438 MsG0480021940.01.T01:CDS
AATACCAAAGGAGTTAACCA+AGG 0.712604 4:+66191734 None:intergenic
TACACGACCAGAGGTCAAAG+GGG 0.719846 4:+66194637 None:intergenic
CATAAACGGAAGCAATCAGG+GGG 0.721408 4:-66195101 MsG0480021940.01.T01:CDS
TTCGGGTTGATGATACAGAG+CGG 0.759200 4:-66196514 MsG0480021940.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAATTCATTTATTATC+AGG + Chr4:66193103-66193122 None:intergenic 10.0%
!! AATTAAAAAAGATATAAAAC+AGG + Chr4:66195089-66195108 None:intergenic 10.0%
!!! AAATTAAACTTTAATTTACA+AGG - Chr4:66192043-66192062 MsG0480021940.01.T01:CDS 10.0%
!! AAAAAAGTTTATTTGACAAA+TGG - Chr4:66192376-66192395 MsG0480021940.01.T01:intron 15.0%
!! AAAATAGAGAAATAATCATA+TGG - Chr4:66194724-66194743 MsG0480021940.01.T01:intron 15.0%
!! AAATAGAGAAATAATCATAT+GGG - Chr4:66194725-66194744 MsG0480021940.01.T01:intron 15.0%
!! ATATAACAAGAAAAAAATGA+TGG - Chr4:66192310-66192329 MsG0480021940.01.T01:intron 15.0%
!! ATCATCATAACATAAAAATA+AGG + Chr4:66191805-66191824 None:intergenic 15.0%
!! TAGAAATATTATTAAAGTGA+CGG + Chr4:66192624-66192643 None:intergenic 15.0%
!! TTTAATTATACCTTTAATCA+TGG - Chr4:66195102-66195121 MsG0480021940.01.T01:CDS 15.0%
!!! ATTTTTTAATTTATGTTCAG+AGG - Chr4:66193830-66193849 MsG0480021940.01.T01:intron 15.0%
!!! TTGTTCATTTTTTTATATCT+AGG - Chr4:66192278-66192297 MsG0480021940.01.T01:CDS 15.0%
!! AAATCATAATAAACTACATG+TGG + Chr4:66192596-66192615 None:intergenic 20.0%
!! AAGAAACATTTCATTTAACA+AGG + Chr4:66192152-66192171 None:intergenic 20.0%
!! AATAAACAATAAGAGTGATA+TGG + Chr4:66194922-66194941 None:intergenic 20.0%
!! AATGTATATATTACCAGATA+CGG + Chr4:66193062-66193081 None:intergenic 20.0%
!! ACAAAAAACAAACCATTTAA+AGG - Chr4:66195529-66195548 MsG0480021940.01.T01:CDS 20.0%
!! AGAAATATTATTAAAGTGAC+GGG + Chr4:66192623-66192642 None:intergenic 20.0%
!! AGATTTAGAGATTAATGAAT+TGG - Chr4:66191911-66191930 MsG0480021940.01.T01:intron 20.0%
!! ATCATCAGAAGATATAATAA+TGG - Chr4:66194011-66194030 MsG0480021940.01.T01:intron 20.0%
!! ATGAAATCACATCAAATTAT+AGG + Chr4:66192194-66192213 None:intergenic 20.0%
!! GATATAAAATGCATGTATTA+GGG + Chr4:66193711-66193730 None:intergenic 20.0%
!! GTAAATCATATTATTGCTTA+TGG - Chr4:66196012-66196031 MsG0480021940.01.T01:intron 20.0%
!! TAATGTAAGATGTTAAAGTT+TGG + Chr4:66193524-66193543 None:intergenic 20.0%
!! TACAAAATATTGTGAAATAG+CGG - Chr4:66195348-66195367 MsG0480021940.01.T01:CDS 20.0%
!! TATATGTAGTTAGATTGTTT+GGG - Chr4:66192804-66192823 MsG0480021940.01.T01:intron 20.0%
!! TATTATTCACATTTCCTTAT+TGG + Chr4:66196481-66196500 None:intergenic 20.0%
!! TGGTTTCTTTATATGATTAA+TGG - Chr4:66192407-66192426 MsG0480021940.01.T01:intron 20.0%
!!! AATGTGGATAATATTTGTTA+GGG - Chr4:66196636-66196655 MsG0480021940.01.T01:CDS 20.0%
!!! AATTGCATTTTACATTTTAC+TGG - Chr4:66194696-66194715 MsG0480021940.01.T01:intron 20.0%
!!! ACTTTTTAAAGTGAATAAGT+GGG - Chr4:66196536-66196555 MsG0480021940.01.T01:CDS 20.0%
!!! GTCTTTCTCTTTTATATTAT+CGG + Chr4:66191862-66191881 None:intergenic 20.0%
!!! TAAACTTTAATTTACAAGGT+AGG - Chr4:66192047-66192066 MsG0480021940.01.T01:CDS 20.0%
!!! TAAAGTTTAATTTAAGCATG+TGG + Chr4:66192036-66192055 None:intergenic 20.0%
!!! TAGCTTCTTTATATTTTCTT+AGG + Chr4:66191884-66191903 None:intergenic 20.0%
!!! TATATGATTAATGGATTTCA+GGG - Chr4:66192416-66192435 MsG0480021940.01.T01:intron 20.0%
!!! TTATATGATTAATGGATTTC+AGG - Chr4:66192415-66192434 MsG0480021940.01.T01:intron 20.0%
!!! TTCATTTTTTTATATCTAGG+TGG - Chr4:66192281-66192300 MsG0480021940.01.T01:CDS 20.0%
!!! TTGTCAAATAAACTTTTTTG+AGG + Chr4:66192375-66192394 None:intergenic 20.0%
!!! TTTTAAGTTTGACACATAAT+TGG - Chr4:66192126-66192145 MsG0480021940.01.T01:intron 20.0%
!!! TTTTGTTTGTTGTTAAATAG+TGG - Chr4:66195260-66195279 MsG0480021940.01.T01:intron 20.0%
! AAAAGTGAATTCTAGTCATT+AGG + Chr4:66196522-66196541 None:intergenic 25.0%
! AACCTCATAATAACATTATG+AGG + Chr4:66193810-66193829 None:intergenic 25.0%
! AAGTCAAATAGTAATAGACT+GGG + Chr4:66195063-66195082 None:intergenic 25.0%
! AATACTGAAAACATTTATGG+AGG - Chr4:66195957-66195976 MsG0480021940.01.T01:intron 25.0%
! AATGATTCCATCTTTATATG+TGG - Chr4:66193452-66193471 MsG0480021940.01.T01:intron 25.0%
! AATTGTTCAATACTACTTCA+TGG + Chr4:66195210-66195229 None:intergenic 25.0%
! ACCTCATAATAACATTATGA+GGG + Chr4:66193809-66193828 None:intergenic 25.0%
! AGCAATACTGAAAACATTTA+TGG - Chr4:66195954-66195973 MsG0480021940.01.T01:intron 25.0%
! ATCTAACAACAGAAAATGAA+AGG + Chr4:66193552-66193571 None:intergenic 25.0%
! ATGTAAGCAAACTTTGTAAT+TGG + Chr4:66193326-66193345 None:intergenic 25.0%
! ATTGTTCAATACTACTTCAT+GGG + Chr4:66195209-66195228 None:intergenic 25.0%
! CAAACAATCTAACTACATAT+AGG + Chr4:66192805-66192824 None:intergenic 25.0%
! CAATGTGGATAATATTTGTT+AGG - Chr4:66196635-66196654 MsG0480021940.01.T01:CDS 25.0%
! CTAACAAATATTATCCACAT+TGG + Chr4:66196637-66196656 None:intergenic 25.0%
! CTATATGTAGTTAGATTGTT+TGG - Chr4:66192803-66192822 MsG0480021940.01.T01:intron 25.0%
! GAATTTAACAAATTCTCTCT+GGG + Chr4:66193187-66193206 None:intergenic 25.0%
! GGATATAAAATGCATGTATT+AGG + Chr4:66193712-66193731 None:intergenic 25.0%
! GGTAAATAAATTATCTAAGG+TGG + Chr4:66192350-66192369 None:intergenic 25.0%
! TAACAACAAACAAAAATGAG+TGG + Chr4:66195255-66195274 None:intergenic 25.0%
! TAATGAATTGGACTGAAATA+TGG - Chr4:66191923-66191942 MsG0480021940.01.T01:intron 25.0%
! TGCAATAAAAAATACAGATC+AGG - Chr4:66193243-66193262 MsG0480021940.01.T01:intron 25.0%
! TGGTTTATGATAGAACATTA+TGG - Chr4:66191943-66191962 MsG0480021940.01.T01:intron 25.0%
! TTCATATCCACATATAAAGA+TGG + Chr4:66193462-66193481 None:intergenic 25.0%
! TTCTAATCACTTGAACAAAA+AGG + Chr4:66194892-66194911 None:intergenic 25.0%
!! ACTACATATAGGCTTTTAAA+TGG + Chr4:66192794-66192813 None:intergenic 25.0%
!! ACTTAACAGTGTTAACTTTT+TGG - Chr4:66194837-66194856 MsG0480021940.01.T01:CDS 25.0%
!! GTGAATTTTACATACCAATA+AGG - Chr4:66196464-66196483 MsG0480021940.01.T01:CDS 25.0%
!! TGTGATAGATTGTAATTTGT+AGG - Chr4:66194232-66194251 MsG0480021940.01.T01:intron 25.0%
!!! AAAACCAGTTTTGAATTGAA+AGG + Chr4:66194597-66194616 None:intergenic 25.0%
!!! AAACCAGTTTTGAATTGAAA+GGG + Chr4:66194596-66194615 None:intergenic 25.0%
!!! ATATGATTAATGGATTTCAG+GGG - Chr4:66192417-66192436 MsG0480021940.01.T01:CDS 25.0%
!!! CACTTTTTAAAGTGAATAAG+TGG - Chr4:66196535-66196554 MsG0480021940.01.T01:CDS 25.0%
!!! CTTTTTAAAGTGAATAAGTG+GGG - Chr4:66196537-66196556 MsG0480021940.01.T01:CDS 25.0%
!!! TAGACTTGTTTTACTTTATC+TGG + Chr4:66196088-66196107 None:intergenic 25.0%
!!! TATGGATGGATTGAATTTAT+GGG - Chr4:66195449-66195468 MsG0480021940.01.T01:intron 25.0%
!!! TCAAATAAACTTTTTTGAGG+CGG + Chr4:66192372-66192391 None:intergenic 25.0%
AAATGAGTAAACTCAAGTTC+TGG - Chr4:66193124-66193143 MsG0480021940.01.T01:intron 30.0%
AACAAACCATTTAAAGGTCT+TGG - Chr4:66195535-66195554 MsG0480021940.01.T01:CDS 30.0%
AAGTTAACACTGTTAAGTGA+AGG + Chr4:66194835-66194854 None:intergenic 30.0%
AATAGCGAATCACATAACAA+TGG + Chr4:66195326-66195345 None:intergenic 30.0%
ACTACTTATGATCCAAATTC+TGG - Chr4:66192680-66192699 MsG0480021940.01.T01:intron 30.0%
ACTGAAAACTATGACATCAA+GGG - Chr4:66192495-66192514 MsG0480021940.01.T01:CDS 30.0%
AGATTTCAGCTAAAACATAC+TGG - Chr4:66194947-66194966 MsG0480021940.01.T01:intron 30.0%
AGGTCATTACAAATATCAAC+AGG + Chr4:66195660-66195679 None:intergenic 30.0%
AGTGAAGAATCATTCTTTGT+AGG - Chr4:66194516-66194535 MsG0480021940.01.T01:intron 30.0%
ATGATTTACCTTCAATGAAC+CGG + Chr4:66196001-66196020 None:intergenic 30.0%
ATTCAGCTATTCGGATATTT+GGG + Chr4:66193002-66193021 None:intergenic 30.0%
ATTCATAGCCCTTCATTTAA+AGG + Chr4:66192103-66192122 None:intergenic 30.0%
ATTTAAAGGCTTGAGCTTTA+GGG + Chr4:66192089-66192108 None:intergenic 30.0%
CAAGTCAAATAGTAATAGAC+TGG + Chr4:66195064-66195083 None:intergenic 30.0%
CAATGCATATCTTATAGCAA+TGG + Chr4:66193583-66193602 None:intergenic 30.0%
CAATGTGATTCAAATCCTTT+AGG - Chr4:66193748-66193767 MsG0480021940.01.T01:intron 30.0%
CTATAGCAAAACGTTTCAAT+AGG + Chr4:66195757-66195776 None:intergenic 30.0%
GAATGTTGTTGGATTTGATT+CGG + Chr4:66191437-66191456 None:intergenic 30.0%
GCGGGTAAATAAATTATCTA+AGG + Chr4:66192353-66192372 None:intergenic 30.0%
GGAATTTAACAAATTCTCTC+TGG + Chr4:66193188-66193207 None:intergenic 30.0%
GGATTGCTATCATTATACTT+GGG - Chr4:66194209-66194228 MsG0480021940.01.T01:intron 30.0%
GTAAGGAGATTAACATAAAC+AGG + Chr4:66194038-66194057 None:intergenic 30.0%
TAAAGATGGAATCATTACCT+TGG + Chr4:66193448-66193467 None:intergenic 30.0%
TACTGAAAACTATGACATCA+AGG - Chr4:66192494-66192513 MsG0480021940.01.T01:CDS 30.0%
TATCTTCTGATGATCAAACT+AGG + Chr4:66194005-66194024 None:intergenic 30.0%
TCACATCAAATTATAGGTCT+AGG + Chr4:66192188-66192207 None:intergenic 30.0%
TCCCTCATAATGTTATTATG+AGG - Chr4:66193805-66193824 MsG0480021940.01.T01:intron 30.0%
TCTAATCCAAGACCTTTAAA+TGG + Chr4:66195544-66195563 None:intergenic 30.0%
TGGATTGCTATCATTATACT+TGG - Chr4:66194208-66194227 MsG0480021940.01.T01:intron 30.0%
TGTTGATATTTGTAATGACC+TGG - Chr4:66195659-66195678 MsG0480021940.01.T01:intron 30.0%
TTATATCAAATGCTTTCGTC+TGG + Chr4:66193882-66193901 None:intergenic 30.0%
TTGTTCAATACTACTTCATG+GGG + Chr4:66195208-66195227 None:intergenic 30.0%
TTTCATATTCAAACAGTGCA+CGG + Chr4:66194570-66194589 None:intergenic 30.0%
! AAACCGTATTGGTCAATTTA+AGG - Chr4:66194335-66194354 MsG0480021940.01.T01:intron 30.0%
! AACCGTATTGGTCAATTTAA+GGG - Chr4:66194336-66194355 MsG0480021940.01.T01:intron 30.0%
! ACTTTAATTTACAAGGTAGG+TGG - Chr4:66192050-66192069 MsG0480021940.01.T01:CDS 30.0%
! ATAATGCATTGGTATATGCA+GGG + Chr4:66196585-66196604 None:intergenic 30.0%
! CCTTTTCTATTACACCAAAT+GGG - Chr4:66193613-66193632 MsG0480021940.01.T01:intron 30.0%
! CTATAAGATATGCATTGACA+AGG - Chr4:66193586-66193605 MsG0480021940.01.T01:intron 30.0%
! CTTGGATTAGAACATATGAA+CGG - Chr4:66195553-66195572 MsG0480021940.01.T01:CDS 30.0%
! GATCTGATGAATACTTTTAC+TGG - Chr4:66196689-66196708 MsG0480021940.01.T01:CDS 30.0%
! GGTCACAAAATTGGTTTAAA+TGG - Chr4:66193024-66193043 MsG0480021940.01.T01:intron 30.0%
! GTGTTAACTTTTTGGATGAT+TGG - Chr4:66194845-66194864 MsG0480021940.01.T01:CDS 30.0%
! TGCATTTTACATTTTACTGG+TGG - Chr4:66194699-66194718 MsG0480021940.01.T01:intron 30.0%
! TTGGAGATAAAACCTACTTT+TGG - Chr4:66194809-66194828 MsG0480021940.01.T01:CDS 30.0%
! TTTTCACAGCTCAACATAAA+CGG - Chr4:66192916-66192935 MsG0480021940.01.T01:intron 30.0%
! TTTTTATATCTAGGTGGTTG+TGG - Chr4:66192287-66192306 MsG0480021940.01.T01:CDS 30.0%
!! AGAGAATTTGTTAAATTCCG+TGG - Chr4:66193189-66193208 MsG0480021940.01.T01:intron 30.0%
!! ATTGAAACGTTTTGCTATAG+AGG - Chr4:66195757-66195776 MsG0480021940.01.T01:intron 30.0%
!! CTATGGATGGATTGAATTTA+TGG - Chr4:66195448-66195467 MsG0480021940.01.T01:intron 30.0%
!! GGTTTAAATGGAGTTGATAA+TGG - Chr4:66193036-66193055 MsG0480021940.01.T01:intron 30.0%
!! TAGAACTTGTTAACTGAGAT+GGG + Chr4:66195594-66195613 None:intergenic 30.0%
!! TATTGTTTCTAGTGCATACA+AGG - Chr4:66194147-66194166 MsG0480021940.01.T01:intron 30.0%
!!! AACCAGTTTTGAATTGAAAG+GGG + Chr4:66194595-66194614 None:intergenic 30.0%
!!! ATTTCTAGAGTGATTTTCAC+AGG - Chr4:66192637-66192656 MsG0480021940.01.T01:intron 30.0%
!!! CAAATAAACTTTTTTGAGGC+GGG + Chr4:66192371-66192390 None:intergenic 30.0%
!!! TTTTATATCCATTTGCTGTG+AGG - Chr4:66193722-66193741 MsG0480021940.01.T01:CDS 30.0%
AAAATAAGGTAGAGAGAGAG+AGG + Chr4:66191791-66191810 None:intergenic 35.0%
AAATAAGGTAGAGAGAGAGA+GGG + Chr4:66191790-66191809 None:intergenic 35.0%
AAATGCTTTCGTCTGGAAAT+TGG + Chr4:66193875-66193894 None:intergenic 35.0%
AAATGGGAAATTGTCATCTC+TGG + Chr4:66195132-66195151 None:intergenic 35.0%
AACAATGTATGAAGTGTAGC+AGG - Chr4:66194448-66194467 MsG0480021940.01.T01:CDS 35.0%
AACATAAACGGAAGCAATCA+GGG - Chr4:66192928-66192947 MsG0480021940.01.T01:intron 35.0%
AAGCTCAAGCCTTTAAATGA+AGG - Chr4:66192091-66192110 MsG0480021940.01.T01:CDS 35.0%
AAGGAATTTCACATGAGAGA+TGG - Chr4:66195001-66195020 MsG0480021940.01.T01:CDS 35.0%
AAGTCCACGGATATCATAAA+TGG + Chr4:66195149-66195168 None:intergenic 35.0%
AATACCAAAGGAGTTAACCA+AGG + Chr4:66196300-66196319 None:intergenic 35.0%
AATATCCGAATAGCTGAATG+TGG - Chr4:66193003-66193022 MsG0480021940.01.T01:intron 35.0%
ACTTACATCTTCGCAAGTAA+AGG + Chr4:66193687-66193706 None:intergenic 35.0%
AGCTCAAGCCTTTAAATGAA+GGG - Chr4:66192092-66192111 MsG0480021940.01.T01:CDS 35.0%
AGTCCACGGATATCATAAAT+GGG + Chr4:66195148-66195167 None:intergenic 35.0%
ATCCATAGTGTTGTCAATTG+CGG + Chr4:66195436-66195455 None:intergenic 35.0%
ATGACAAACTCACCAGAATT+TGG + Chr4:66192695-66192714 None:intergenic 35.0%
ATTCAACTCTTGAGAGTAAC+TGG - Chr4:66194748-66194767 MsG0480021940.01.T01:intron 35.0%
CAAATACGCAATTCGTTTCA+TGG + Chr4:66191626-66191645 None:intergenic 35.0%
CACCCTTAAATTGACCAATA+CGG + Chr4:66194341-66194360 None:intergenic 35.0%
CATTCAGCTATTCGGATATT+TGG + Chr4:66193003-66193022 None:intergenic 35.0%
CATTTAAAGGCTTGAGCTTT+AGG + Chr4:66192090-66192109 None:intergenic 35.0%
CATTTCACTTCAGATAAGCA+AGG - Chr4:66195477-66195496 MsG0480021940.01.T01:intron 35.0%
CTCAATAGGATGTGATTGTT+AGG - Chr4:66192569-66192588 MsG0480021940.01.T01:intron 35.0%
CTCAATATTAATCCCTCATG+CGG - Chr4:66196381-66196400 MsG0480021940.01.T01:CDS 35.0%
CTCTCATGTGAAATTCCTTT+CGG + Chr4:66195000-66195019 None:intergenic 35.0%
CTGTTGACAAGTATCCATAT+CGG + Chr4:66196211-66196230 None:intergenic 35.0%
GAAACGAATTGCGTATTTGT+TGG - Chr4:66191627-66191646 MsG0480021940.01.T01:three_prime_UTR 35.0%
GAAGAATCATTCTTTGTAGG+AGG - Chr4:66194519-66194538 MsG0480021940.01.T01:intron 35.0%
GAATAATATGCGTACTCTTC+AGG - Chr4:66194183-66194202 MsG0480021940.01.T01:intron 35.0%
GATATTTGTAATGACCTGGT+TGG - Chr4:66195663-66195682 MsG0480021940.01.T01:intron 35.0%
GATCAATCTGTGTAAATGAG+AGG + Chr4:66195712-66195731 None:intergenic 35.0%
GTCAAAACTGAAAACCGTAT+TGG - Chr4:66194324-66194343 MsG0480021940.01.T01:intron 35.0%
GTTATATGCCTTGATTAGTG+TGG - Chr4:66196166-66196185 MsG0480021940.01.T01:intron 35.0%
GTTGTACTAATGCATGAATC+AGG - Chr4:66194272-66194291 MsG0480021940.01.T01:intron 35.0%
GTTTCAGAACATCAATCTCA+AGG - Chr4:66195779-66195798 MsG0480021940.01.T01:intron 35.0%
TAATCAAGCAGTAAAACCTC+AGG + Chr4:66193639-66193658 None:intergenic 35.0%
TAGTGACAGTTTCAATTCCT+CGG + Chr4:66192664-66192683 None:intergenic 35.0%
TCAATATTAATCCCTCATGC+GGG - Chr4:66196382-66196401 MsG0480021940.01.T01:CDS 35.0%
TCAATCTCAAGGAAATAGCA+AGG - Chr4:66195790-66195809 MsG0480021940.01.T01:intron 35.0%
TCTCATGTGAAATTCCTTTC+GGG + Chr4:66194999-66195018 None:intergenic 35.0%
TGAGGGACATATACTAAAAG+TGG + Chr4:66193792-66193811 None:intergenic 35.0%
TTCAACTCTTGAGAGTAACT+GGG - Chr4:66194749-66194768 MsG0480021940.01.T01:intron 35.0%
TTCAGCTAAAACATACTGGT+AGG - Chr4:66194951-66194970 MsG0480021940.01.T01:intron 35.0%
TTCCCCTTTCAATTCAAAAC+TGG - Chr4:66194590-66194609 MsG0480021940.01.T01:intron 35.0%
TTTCCCATTTATGATATCCG+TGG - Chr4:66195142-66195161 MsG0480021940.01.T01:intron 35.0%
! AAAGTGGCATACCTAAGTTT+TGG + Chr4:66193776-66193795 None:intergenic 35.0%
! ATGCTTTTATTGCCCAAATC+AGG - Chr4:66192956-66192975 MsG0480021940.01.T01:intron 35.0%
! GATAATGCATTGGTATATGC+AGG + Chr4:66196586-66196605 None:intergenic 35.0%
! GATTGTAATTTGTAGGCTAC+TGG - Chr4:66194239-66194258 MsG0480021940.01.T01:intron 35.0%
! GCCTTTTCTATTACACCAAA+TGG - Chr4:66193612-66193631 MsG0480021940.01.T01:intron 35.0%
! TAAAAACAGATCTAGAGCCT+AGG + Chr4:66194545-66194564 None:intergenic 35.0%
! TAAGATATGCATTGACAAGG+CGG - Chr4:66193589-66193608 MsG0480021940.01.T01:intron 35.0%
! TAATGCATTGGTATATGCAG+GGG + Chr4:66196584-66196603 None:intergenic 35.0%
! TCCTTTAGGAACCAAAACTT+AGG - Chr4:66193762-66193781 MsG0480021940.01.T01:intron 35.0%
! TGCTTTTATTGCCCAAATCA+GGG - Chr4:66192957-66192976 MsG0480021940.01.T01:intron 35.0%
! TTGGTGTTCATATCTTCTTG+TGG - Chr4:66191761-66191780 MsG0480021940.01.T01:CDS 35.0%
!! AATAGACGTTGTTGATGACT+TGG + Chr4:66193663-66193682 None:intergenic 35.0%
!! ATAGACGTTGTTGATGACTT+GGG + Chr4:66193662-66193681 None:intergenic 35.0%
!! ATGTGATTGAGGTATTGGAT+GGG - Chr4:66196412-66196431 MsG0480021940.01.T01:CDS 35.0%
!! ATTATCGGTGTCAATGTGTA+GGG + Chr4:66191847-66191866 None:intergenic 35.0%
!! CCCATTTGGTGTAATAGAAA+AGG + Chr4:66193616-66193635 None:intergenic 35.0%
!! GTAGAACTTGTTAACTGAGA+TGG + Chr4:66195595-66195614 None:intergenic 35.0%
!! TATTATCGGTGTCAATGTGT+AGG + Chr4:66191848-66191867 None:intergenic 35.0%
!! TGAATTGCTTTGTTTGACTC+AGG + Chr4:66194127-66194146 None:intergenic 35.0%
!! TGTTTTGCTATGTCTGAGTT+GGG - Chr4:66192519-66192538 MsG0480021940.01.T01:CDS 35.0%
!! TTGTTTTGCTATGTCTGAGT+TGG - Chr4:66192518-66192537 MsG0480021940.01.T01:CDS 35.0%
!!! ACCTAAGTTTTGGTTCCTAA+AGG + Chr4:66193766-66193785 None:intergenic 35.0%
!!! CATACAAGGCTACTTTTACA+TGG - Chr4:66194161-66194180 MsG0480021940.01.T01:intron 35.0%
!!! TGATTGCTTTTTCTGAGAGT+TGG - Chr4:66193266-66193285 MsG0480021940.01.T01:intron 35.0%
AAACGCATCAGGAATACCAA+AGG + Chr4:66196312-66196331 None:intergenic 40.0%
AACAACATATATGAGCCGCA+GGG + Chr4:66193938-66193957 None:intergenic 40.0%
AACTTCCTCAACTCTTCTTG+TGG + Chr4:66191691-66191710 None:intergenic 40.0%
AAGTCAATCGACAAAGTCCA+CGG + Chr4:66195162-66195181 None:intergenic 40.0%
AATAAGGTAGAGAGAGAGAG+GGG + Chr4:66191789-66191808 None:intergenic 40.0%
ACAAGAAGAGTTGAGGAAGT+TGG - Chr4:66191690-66191709 MsG0480021940.01.T01:CDS 40.0%
ACATAAACGGAAGCAATCAG+GGG - Chr4:66192929-66192948 MsG0480021940.01.T01:intron 40.0%
ACGTGCATTCAACATTTGAG+GGG - Chr4:66194367-66194386 MsG0480021940.01.T01:CDS 40.0%
ACTTCCTCAACTCTTCTTGT+GGG + Chr4:66191690-66191709 None:intergenic 40.0%
AGACACATCATATGTCTCCT+AGG + Chr4:66194634-66194653 None:intergenic 40.0%
AGTAGGAGTTATGTGTGAAG+TGG - Chr4:66194480-66194499 MsG0480021940.01.T01:intron 40.0%
AGTTGGCATGGATAATGCAT+TGG + Chr4:66196596-66196615 None:intergenic 40.0%
ATACTCCTGCAATAAGCTGT+TGG - Chr4:66196660-66196679 MsG0480021940.01.T01:CDS 40.0%
ATATGCGTACTCTTCAGGTA+TGG - Chr4:66194188-66194207 MsG0480021940.01.T01:intron 40.0%
ATCCGCAATTGACAACACTA+TGG - Chr4:66195431-66195450 MsG0480021940.01.T01:intron 40.0%
ATGTCTCCTAGGCTTGAATT+TGG + Chr4:66194623-66194642 None:intergenic 40.0%
ATTTAAGCATGTGGCAGCTT+TGG + Chr4:66192027-66192046 None:intergenic 40.0%
CAACATAAACGGAAGCAATC+AGG - Chr4:66192927-66192946 MsG0480021940.01.T01:intron 40.0%
CAACCCAGTTGTATGCAATA+GGG + Chr4:66196340-66196359 None:intergenic 40.0%
CAAGTATCCATATCGGAGAA+AGG + Chr4:66196204-66196223 None:intergenic 40.0%
CAGAAAATGCTTCTGTAGTG+AGG - Chr4:66196228-66196247 MsG0480021940.01.T01:intron 40.0%
CAGTTCTGTTTACATCTCCA+AGG - Chr4:66193428-66193447 MsG0480021940.01.T01:intron 40.0%
CATCAAGAGCAGTGAATTTC+AGG - Chr4:66195615-66195634 MsG0480021940.01.T01:intron 40.0%
CATGGGAGTAATGTATGTGA+AGG - Chr4:66192543-66192562 MsG0480021940.01.T01:CDS 40.0%
CATTGAATCCTCACAGCAAA+TGG + Chr4:66193733-66193752 None:intergenic 40.0%
CTGAAATTCACTGCTCTTGA+TGG + Chr4:66195617-66195636 None:intergenic 40.0%
CTTCACATACATTACTCCCA+TGG + Chr4:66192545-66192564 None:intergenic 40.0%
GAATTCCAACAGCTTATTGC+AGG + Chr4:66196668-66196687 None:intergenic 40.0%
GACATGCTATGTATTCTGCA+AGG + Chr4:66195507-66195526 None:intergenic 40.0%
GACGTGCATTCAACATTTGA+GGG - Chr4:66194366-66194385 MsG0480021940.01.T01:CDS 40.0%
GACTAAGCATGACAAAGCAT+AGG + Chr4:66194977-66194996 None:intergenic 40.0%
GCAATTGACAACACTATGGA+TGG - Chr4:66195435-66195454 MsG0480021940.01.T01:intron 40.0%
GCATATCTGTAGAAGACGTA+AGG + Chr4:66194055-66194074 None:intergenic 40.0%
GCATTAGTACAACCTTAGTG+AGG + Chr4:66194265-66194284 None:intergenic 40.0%
GCTGAATGTGGTCACAAAAT+TGG - Chr4:66193015-66193034 MsG0480021940.01.T01:intron 40.0%
GGAGATGTAAACAGAACTGA+CGG + Chr4:66193427-66193446 None:intergenic 40.0%
GTTAAGTGAAGGCCAAAAGT+AGG + Chr4:66194824-66194843 None:intergenic 40.0%
TAACAACATATATGAGCCGC+AGG + Chr4:66193939-66193958 None:intergenic 40.0%
TAGAGTCCTCACTAGAATGA+AGG + Chr4:66195822-66195841 None:intergenic 40.0%
TCAACCCAGTTGTATGCAAT+AGG + Chr4:66196341-66196360 None:intergenic 40.0%
TCAACTCTTGAGAGTAACTG+GGG - Chr4:66194750-66194769 MsG0480021940.01.T01:intron 40.0%
TCCATCTGAATCCCTGATTT+GGG + Chr4:66192971-66192990 None:intergenic 40.0%
TCCTGATTATAACCAGTCCA+TGG - Chr4:66191582-66191601 MsG0480021940.01.T01:three_prime_UTR 40.0%
TCTGCATGTGATTGAGGTAT+TGG - Chr4:66196407-66196426 MsG0480021940.01.T01:CDS 40.0%
TGACGTGCATTCAACATTTG+AGG - Chr4:66194365-66194384 MsG0480021940.01.T01:CDS 40.0%
TGCGGCTCATATATGTTGTT+AGG - Chr4:66193938-66193957 MsG0480021940.01.T01:CDS 40.0%
TGTGACCACATTCAGCTATT+CGG + Chr4:66193011-66193030 None:intergenic 40.0%
TTCCATCTGAATCCCTGATT+TGG + Chr4:66192972-66192991 None:intergenic 40.0%
TTGCGGATCGCATAAAATAG+CGG + Chr4:66195419-66195438 None:intergenic 40.0%
TTTCTGCCAAATTCAAGCCT+AGG - Chr4:66194614-66194633 MsG0480021940.01.T01:CDS 40.0%
! AAGATATGCATTGACAAGGC+GGG - Chr4:66193590-66193609 MsG0480021940.01.T01:intron 40.0%
! ACTGGGTTGAGTCAAATTCT+TGG - Chr4:66196351-66196370 MsG0480021940.01.T01:CDS 40.0%
! ATTGCGTATTTGTTGGATCG+TGG - Chr4:66191634-66191653 MsG0480021940.01.T01:three_prime_UTR 40.0%
! CTCTGGAGAACCATGATTAA+AGG + Chr4:66195115-66195134 None:intergenic 40.0%
! GCTACTTCGTTTGAGTTTGT+TGG - Chr4:66194790-66194809 MsG0480021940.01.T01:CDS 40.0%
! TTGGCTCTTCATGAGGTTAT+TGG - Chr4:66191709-66191728 MsG0480021940.01.T01:CDS 40.0%
!! ATTAATGGATTTCAGGGGTG+GGG - Chr4:66192422-66192441 MsG0480021940.01.T01:CDS 40.0%
!! CATGTGATTGAGGTATTGGA+TGG - Chr4:66196411-66196430 MsG0480021940.01.T01:CDS 40.0%
!! CATTCTCTTGCTGTTAAGCT+TGG - Chr4:66191742-66191761 MsG0480021940.01.T01:CDS 40.0%
!! GATTAATGGATTTCAGGGGT+GGG - Chr4:66192421-66192440 MsG0480021940.01.T01:CDS 40.0%
!! TCAAAGGTGTCGAATGTTGT+TGG + Chr4:66191448-66191467 None:intergenic 40.0%
!! TCAGCTCAGAAGTATTGGAT+CGG - Chr4:66192731-66192750 MsG0480021940.01.T01:intron 40.0%
!! TCCATGGACTGGTTATAATC+AGG + Chr4:66191586-66191605 None:intergenic 40.0%
!! TGATTAATGGATTTCAGGGG+TGG - Chr4:66192420-66192439 MsG0480021940.01.T01:CDS 40.0%
!! TGGATTTGATTCGGAGAGTT+CGG + Chr4:66191428-66191447 None:intergenic 40.0%
!! TGTGATTGAGGTATTGGATG+GGG - Chr4:66196413-66196432 MsG0480021940.01.T01:CDS 40.0%
AACAACCAAGCCACTAAGTG+GGG + Chr4:66191991-66192010 None:intergenic 45.0%
AAGTGAATAAGTGGGGTGTG+TGG - Chr4:66196544-66196563 MsG0480021940.01.T01:CDS 45.0%
ACAACAACCAAGCCACTAAG+TGG + Chr4:66191993-66192012 None:intergenic 45.0%
AGAGCATAACTCAGTTGGCA+TGG + Chr4:66196608-66196627 None:intergenic 45.0%
AGTAAAACCTCAGGCCCATT+TGG + Chr4:66193630-66193649 None:intergenic 45.0%
AGTCTGCCTTCATTCTAGTG+AGG - Chr4:66195813-66195832 MsG0480021940.01.T01:intron 45.0%
AGTGAATAAGTGGGGTGTGT+GGG - Chr4:66196545-66196564 MsG0480021940.01.T01:CDS 45.0%
ATAGGGCTCAAAAACGCATC+AGG + Chr4:66196323-66196342 None:intergenic 45.0%
ATTGGTATATGCAGGGGTCA+GGG + Chr4:66196578-66196597 None:intergenic 45.0%
CAAAATAAACACCTGCCCTG+CGG - Chr4:66193920-66193939 MsG0480021940.01.T01:CDS 45.0%
CAACAACCAAGCCACTAAGT+GGG + Chr4:66191992-66192011 None:intergenic 45.0%
CAACAATGTTCTGATGCAGC+AGG - Chr4:66194392-66194411 MsG0480021940.01.T01:CDS 45.0%
CAAGAGCTTTCGCATCTCAA+AGG + Chr4:66191464-66191483 None:intergenic 45.0%
CATAAACGGAAGCAATCAGG+GGG - Chr4:66192930-66192949 MsG0480021940.01.T01:intron 45.0%
CGAAGTTCAGCACATAGCTT+TGG + Chr4:66196263-66196282 None:intergenic 45.0%
CGTGCATTCAACATTTGAGG+GGG - Chr4:66194368-66194387 MsG0480021940.01.T01:CDS 45.0%
CTAAGAATGCTGCAAACCTC+TGG + Chr4:66193374-66193393 None:intergenic 45.0%
CTTGCCTTGGTTAACTCCTT+TGG - Chr4:66196293-66196312 MsG0480021940.01.T01:CDS 45.0%
GAGCCCTATTGCATACAACT+GGG - Chr4:66196334-66196353 MsG0480021940.01.T01:CDS 45.0%
GATAGAAGCTTCTACCAACC+AGG + Chr4:66195680-66195699 None:intergenic 45.0%
GCACTCAAGTATTCACCACT+TGG + Chr4:66193226-66193245 None:intergenic 45.0%
GTATGTGAAGGCTGCTCAAT+AGG - Chr4:66192555-66192574 MsG0480021940.01.T01:intron 45.0%
GTCTTCGTCCACACTAATCA+AGG + Chr4:66196177-66196196 None:intergenic 45.0%
GTTAACTGAGATGGGATGAC+AGG + Chr4:66195586-66195605 None:intergenic 45.0%
TATTACACCAAATGGGCCTG+AGG - Chr4:66193620-66193639 MsG0480021940.01.T01:intron 45.0%
TCAATAGGTCTCGCTCTCTT+AGG + Chr4:66195742-66195761 None:intergenic 45.0%
TCATTCTTTGTAGGAGGCCT+AGG - Chr4:66194525-66194544 MsG0480021940.01.T01:intron 45.0%
TGAGCCCTATTGCATACAAC+TGG - Chr4:66196333-66196352 MsG0480021940.01.T01:CDS 45.0%
TGCCAACTGAGTTATGCTCT+CGG - Chr4:66196608-66196627 MsG0480021940.01.T01:CDS 45.0%
TTAACCAAGGCAAGTGCATG+CGG + Chr4:66196287-66196306 None:intergenic 45.0%
TTACACGACCAGAGGTCAAA+GGG + Chr4:66193398-66193417 None:intergenic 45.0%
TTGTCATGCTTAGTCCCGAA+AGG - Chr4:66194982-66195001 MsG0480021940.01.T01:intron 45.0%
TTTACCTTCAATGAACCGGC+TGG + Chr4:66195997-66196016 None:intergenic 45.0%
TTTGACAAATGGCTCACTGC+TGG - Chr4:66192387-66192406 MsG0480021940.01.T01:intron 45.0%
! GAGTAAACTCAAGTTCTGGC+TGG - Chr4:66193128-66193147 MsG0480021940.01.T01:intron 45.0%
! GTGAGTCAGCTCAGAAGTAT+TGG - Chr4:66192726-66192745 MsG0480021940.01.T01:intron 45.0%
! TACTTCTGAGCTGACTCACA+CGG + Chr4:66192725-66192744 None:intergenic 45.0%
! TGGATCGTGGTGTTTTTCGT+GGG - Chr4:66191647-66191666 MsG0480021940.01.T01:exon 45.0%
! TTCACCACTTGGTGAAACGT+CGG + Chr4:66193215-66193234 None:intergenic 45.0%
! TTGCATTTTGTCTCCTCTGC+AGG - Chr4:66196121-66196140 MsG0480021940.01.T01:intron 45.0%
! TTGGATCGTGGTGTTTTTCG+TGG - Chr4:66191646-66191665 MsG0480021940.01.T01:exon 45.0%
! TTTACCAGCCGGTTCATTGA+AGG - Chr4:66195990-66196009 MsG0480021940.01.T01:intron 45.0%
!! ACTTAGTGGCTTGGTTGTTG+TGG - Chr4:66191992-66192011 MsG0480021940.01.T01:intron 45.0%
!! CTTTGAGATGCGAAAGCTCT+TGG - Chr4:66191462-66191481 MsG0480021940.01.T01:three_prime_UTR 45.0%
!! GAGTTGATAATGGCCGTATC+TGG - Chr4:66193046-66193065 MsG0480021940.01.T01:intron 45.0%
!! GGATTTGATTCGGAGAGTTC+GGG + Chr4:66191427-66191446 None:intergenic 45.0%
!! TACAGAGCGGACTATTCAAC+CGG - Chr4:66191530-66191549 MsG0480021940.01.T01:three_prime_UTR 45.0%
!! TATCAGCTTGCTGAGGACTT+GGG - Chr4:66195913-66195932 MsG0480021940.01.T01:intron 45.0%
!! TTATCAGCTTGCTGAGGACT+TGG - Chr4:66195912-66195931 MsG0480021940.01.T01:intron 45.0%
!! TTCGGGTTGATGATACAGAG+CGG - Chr4:66191517-66191536 MsG0480021940.01.T01:three_prime_UTR 45.0%
ACAATCTGGAAGATCGCGAC+TGG - Chr4:66191491-66191510 MsG0480021940.01.T01:three_prime_UTR 50.0%
ACATGCAGAAACCCGCATGA+GGG + Chr4:66196396-66196415 None:intergenic 50.0%
ACCAGTCCATGGAACAACAG+AGG - Chr4:66191593-66191612 MsG0480021940.01.T01:three_prime_UTR 50.0%
AGACCTAAGACATCCTGCAG+AGG + Chr4:66196137-66196156 None:intergenic 50.0%
AGCTAAGGCAAGCGTAGTTG+TGG + Chr4:66191396-66191415 None:intergenic 50.0%
ATAGGTCTCGCTCTCTTAGG+TGG + Chr4:66195739-66195758 None:intergenic 50.0%
ATGGCCCACAAGAAGAGTTG+AGG - Chr4:66191683-66191702 MsG0480021940.01.T01:CDS 50.0%
CATCTCCCTCTGTTGTTCCA+TGG + Chr4:66191602-66191621 None:intergenic 50.0%
CATTGGTATATGCAGGGGTC+AGG + Chr4:66196579-66196598 None:intergenic 50.0%
CCAACTGAGTTATGCTCTCG+GGG - Chr4:66196610-66196629 MsG0480021940.01.T01:CDS 50.0%
CCAGTCCATGGAACAACAGA+GGG - Chr4:66191594-66191613 MsG0480021940.01.T01:three_prime_UTR 50.0%
CCTCAGCAAGCTGATAACTC+TGG + Chr4:66195909-66195928 None:intergenic 50.0%
CGGGTTTCTGCATGTGATTG+AGG - Chr4:66196401-66196420 MsG0480021940.01.T01:CDS 50.0%
GAGATGCGAAAGCTCTTGGA+CGG - Chr4:66191466-66191485 MsG0480021940.01.T01:three_prime_UTR 50.0%
GCCAACTGAGTTATGCTCTC+GGG - Chr4:66196609-66196628 MsG0480021940.01.T01:CDS 50.0%
GCCCAAATCAGGGATTCAGA+TGG - Chr4:66192967-66192986 MsG0480021940.01.T01:intron 50.0%
GCGTAGTTGTGGAGGATTGT+TGG + Chr4:66191385-66191404 None:intergenic 50.0%
GGCAATAGTTACACGACCAG+AGG + Chr4:66193406-66193425 None:intergenic 50.0%
GGTGGGGCTGTAAAGTTTCT+GGG - Chr4:66192438-66192457 MsG0480021940.01.T01:CDS 50.0%
GTATGTCTTCTGTGCTCCAG+AGG - Chr4:66193355-66193374 MsG0480021940.01.T01:intron 50.0%
GTGAATAAGTGGGGTGTGTG+GGG - Chr4:66196546-66196565 MsG0480021940.01.T01:CDS 50.0%
GTTACACGACCAGAGGTCAA+AGG + Chr4:66193399-66193418 None:intergenic 50.0%
GTTGTGGAGGATTGTTGGTG+CGG + Chr4:66191380-66191399 None:intergenic 50.0%
TAAGGCAAGCGTAGTTGTGG+AGG + Chr4:66191393-66191412 None:intergenic 50.0%
TACACGACCAGAGGTCAAAG+GGG + Chr4:66193397-66193416 None:intergenic 50.0%
TAGCTCTCAGCCACTTGTCA+TGG + Chr4:66192476-66192495 None:intergenic 50.0%
TCGGTGGTGCAGCAAATGTA+AGG - Chr4:66192750-66192769 MsG0480021940.01.T01:intron 50.0%
TCTCCTCTGCAGGATGTCTT+AGG - Chr4:66196131-66196150 MsG0480021940.01.T01:intron 50.0%
TTCTTAGCCCCTTTGACCTC+TGG - Chr4:66193387-66193406 MsG0480021940.01.T01:intron 50.0%
! AAGATCGCGACTGGCTATTC+GGG - Chr4:66191500-66191519 MsG0480021940.01.T01:three_prime_UTR 50.0%
! ATCGTGGTGTTTTTCGTGGG+TGG - Chr4:66191650-66191669 MsG0480021940.01.T01:exon 50.0%
! CTATGTCTGAGTTGGGCCAT+GGG - Chr4:66192526-66192545 MsG0480021940.01.T01:CDS 50.0%
! GAAGATCGCGACTGGCTATT+CGG - Chr4:66191499-66191518 MsG0480021940.01.T01:three_prime_UTR 50.0%
! GAGGAAGTTGGCTCTTCATG+AGG - Chr4:66191702-66191721 MsG0480021940.01.T01:CDS 50.0%
! GAGTGATTTTCACAGGTCCG+AGG - Chr4:66192644-66192663 MsG0480021940.01.T01:intron 50.0%
! GTAGCAGGTTCTGATGCAGT+AGG - Chr4:66194463-66194482 MsG0480021940.01.T01:CDS 50.0%
! GTTTTTCGTGGGTGGCTTAC+TGG - Chr4:66191658-66191677 MsG0480021940.01.T01:exon 50.0%
! TAAGCATGTGGCAGCTTTGG+TGG + Chr4:66192024-66192043 None:intergenic 50.0%
!! ACTAAGTGGGGTTGGCTACA+CGG + Chr4:66191979-66191998 None:intergenic 50.0%
!! CCAGAGTTATCAGCTTGCTG+AGG - Chr4:66195906-66195925 MsG0480021940.01.T01:intron 50.0%
!! GCTCAGAAGTATTGGATCGG+TGG - Chr4:66192734-66192753 MsG0480021940.01.T01:intron 50.0%
!! TTGAGGTATTGGATGGGGTG+TGG - Chr4:66196418-66196437 MsG0480021940.01.T01:CDS 50.0%
!! TTTGATTCGGAGAGTTCGGG+AGG + Chr4:66191424-66191443 None:intergenic 50.0%
ACATATATGAGCCGCAGGGC+AGG + Chr4:66193934-66193953 None:intergenic 55.0%
ACCAAGCCACTAAGTGGGGT+TGG + Chr4:66191987-66192006 None:intergenic 55.0%
AGGATTGTTGGTGCGGTTGG+TGG + Chr4:66191373-66191392 None:intergenic 55.0%
CACATGCAGAAACCCGCATG+AGG + Chr4:66196397-66196416 None:intergenic 55.0%
CAGGAATGCCGTGAAGCATG+TGG - Chr4:66194291-66194310 MsG0480021940.01.T01:intron 55.0%
CCAAGCGTCACCATGACAAG+TGG - Chr4:66192463-66192482 MsG0480021940.01.T01:CDS 55.0%
CCCTCTGTTGTTCCATGGAC+TGG + Chr4:66191597-66191616 None:intergenic 55.0%
CCTGTCCTCCACATGCTTCA+CGG + Chr4:66194302-66194321 None:intergenic 55.0%
CGTGAAGCATGTGGAGGACA+GGG - Chr4:66194300-66194319 MsG0480021940.01.T01:intron 55.0%
CTGGCTGGACATCTGACTTC+AGG - Chr4:66193143-66193162 MsG0480021940.01.T01:intron 55.0%
GAATGCCGTGAAGCATGTGG+AGG - Chr4:66194294-66194313 MsG0480021940.01.T01:intron 55.0%
GACGCTGCCTTTCTCCGATA+TGG - Chr4:66196194-66196213 MsG0480021940.01.T01:intron 55.0%
GAGGTGATTGGTGAGGATGG+TGG + Chr4:66191341-66191360 None:intergenic 55.0%
GCTCTTGGACGGTCACAATC+TGG - Chr4:66191477-66191496 MsG0480021940.01.T01:three_prime_UTR 55.0%
GCTGAGTCAGCTTTACCAGC+CGG - Chr4:66195979-66195998 MsG0480021940.01.T01:intron 55.0%
GCTGTAGCACTGTTGCGTAG+TGG - Chr4:66195381-66195400 MsG0480021940.01.T01:intron 55.0%
GGATTGTTGGTGCGGTTGGT+GGG + Chr4:66191372-66191391 None:intergenic 55.0%
GGGTGGGGCTGTAAAGTTTC+TGG - Chr4:66192437-66192456 MsG0480021940.01.T01:CDS 55.0%
GTGTAGCCAACCCCACTTAG+TGG - Chr4:66191978-66191997 MsG0480021940.01.T01:intron 55.0%
GTTCGGGAGGAGAGTAGCTA+AGG + Chr4:66191411-66191430 None:intergenic 55.0%
TATGCTCTCGGGGACCAATG+TGG - Chr4:66196620-66196639 MsG0480021940.01.T01:CDS 55.0%
TGGACAACAACCGCATCACC+TGG - Chr4:66191311-66191330 MsG0480021940.01.T01:three_prime_UTR 55.0%
TGGAGGATTGTTGGTGCGGT+TGG + Chr4:66191376-66191395 None:intergenic 55.0%
! ACTTGGTGAAACGTCGGCCA+CGG + Chr4:66193209-66193228 None:intergenic 55.0%
! CCACTTGTCATGGTGACGCT+TGG + Chr4:66192466-66192485 None:intergenic 55.0%
! CCCCGAGAGCATAACTCAGT+TGG + Chr4:66196613-66196632 None:intergenic 55.0%
! GCTATGTCTGAGTTGGGCCA+TGG - Chr4:66192525-66192544 MsG0480021940.01.T01:CDS 55.0%
! GTAGGCTACTGGCCTCACTA+AGG - Chr4:66194250-66194269 MsG0480021940.01.T01:intron 55.0%
!! AGAGCGGACTATTCAACCGG+CGG - Chr4:66191533-66191552 MsG0480021940.01.T01:three_prime_UTR 55.0%
CACACGTGCGTGCACTGAGA+AGG + Chr4:66196044-66196063 None:intergenic 60.0%
CCGTGAAGCATGTGGAGGAC+AGG - Chr4:66194299-66194318 MsG0480021940.01.T01:intron 60.0%
CGTGGGTGGCTTACTGGTGA+TGG - Chr4:66191664-66191683 MsG0480021940.01.T01:CDS 60.0%
GCCAACCCCACTTAGTGGCT+TGG - Chr4:66191983-66192002 MsG0480021940.01.T01:intron 60.0%
GCGGAGGTGATTGGTGAGGA+TGG + Chr4:66191344-66191363 None:intergenic 60.0%
GTGGCCGACGTTTCACCAAG+TGG - Chr4:66193208-66193227 MsG0480021940.01.T01:intron 60.0%
TCGACCGCATGCACTTGCCT+TGG - Chr4:66196280-66196299 MsG0480021940.01.T01:CDS 60.0%
TGGTGGTTCGCCAGGTGATG+CGG + Chr4:66191324-66191343 None:intergenic 60.0%
TTCAACCGGCGGGAAGTCGA+CGG - Chr4:66191544-66191563 MsG0480021940.01.T01:three_prime_UTR 60.0%
! CATGGCGGAGGTGATTGGTG+AGG + Chr4:66191348-66191367 None:intergenic 60.0%
! TGGGTCATGGCGGAGGTGAT+TGG + Chr4:66191353-66191372 None:intergenic 60.0%
!! GAGCGGACTATTCAACCGGC+GGG - Chr4:66191534-66191553 MsG0480021940.01.T01:three_prime_UTR 60.0%
!! TTGGTGCGGTTGGTGGGTCA+TGG + Chr4:66191366-66191385 None:intergenic 60.0%
TCAACCGGCGGGAAGTCGAC+GGG - Chr4:66191545-66191564 MsG0480021940.01.T01:three_prime_UTR 65.0%
! GGTGAGGATGGTGGTTCGCC+AGG + Chr4:66191332-66191351 None:intergenic 65.0%
!! GTGCGGTTGGTGGGTCATGG+CGG + Chr4:66191363-66191382 None:intergenic 65.0%
!! CGGTTGGTGGGTCATGGCGG+AGG + Chr4:66191360-66191379 None:intergenic 70.0%
ACCGGCGGGAAGTCGACGGG+AGG - Chr4:66191548-66191567 MsG0480021940.01.T01:three_prime_UTR 75.0%
CCGGCGGGAAGTCGACGGGA+GGG - Chr4:66191549-66191568 MsG0480021940.01.T01:three_prime_UTR 75.0%
!! CCCTCCCGTCGACTTCCCGC+CGG + Chr4:66191552-66191571 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 66191310 66196743 66191310 ID=MsG0480021940.01;Name=MsG0480021940.01
Chr4 mRNA 66191310 66196743 66191310 ID=MsG0480021940.01.T01;Parent=MsG0480021940.01;Name=MsG0480021940.01.T01;_AED=0.45;_eAED=0.45;_QI=0|1|1|1|0.92|0.85|14|352|678
Chr4 exon 66191310 66191910 66191310 ID=MsG0480021940.01.T01:exon:8041;Parent=MsG0480021940.01.T01
Chr4 exon 66192042 66192143 66192042 ID=MsG0480021940.01.T01:exon:8040;Parent=MsG0480021940.01.T01
Chr4 exon 66192224 66192328 66192224 ID=MsG0480021940.01.T01:exon:8039;Parent=MsG0480021940.01.T01
Chr4 exon 66192417 66192563 66192417 ID=MsG0480021940.01.T01:exon:8038;Parent=MsG0480021940.01.T01
Chr4 exon 66193640 66193759 66193640 ID=MsG0480021940.01.T01:exon:8037;Parent=MsG0480021940.01.T01
Chr4 exon 66193849 66193984 66193849 ID=MsG0480021940.01.T01:exon:8036;Parent=MsG0480021940.01.T01
Chr4 exon 66194353 66194483 66194353 ID=MsG0480021940.01.T01:exon:8035;Parent=MsG0480021940.01.T01
Chr4 exon 66194604 66194678 66194604 ID=MsG0480021940.01.T01:exon:8034;Parent=MsG0480021940.01.T01
Chr4 exon 66194789 66194888 66194789 ID=MsG0480021940.01.T01:exon:8033;Parent=MsG0480021940.01.T01
Chr4 exon 66194986 66195158 66194986 ID=MsG0480021940.01.T01:exon:8032;Parent=MsG0480021940.01.T01
Chr4 exon 66195287 66195394 66195287 ID=MsG0480021940.01.T01:exon:8031;Parent=MsG0480021940.01.T01
Chr4 exon 66195499 66195616 66195499 ID=MsG0480021940.01.T01:exon:8030;Parent=MsG0480021940.01.T01
Chr4 exon 66196271 66196743 66196271 ID=MsG0480021940.01.T01:exon:8029;Parent=MsG0480021940.01.T01
Chr4 CDS 66196271 66196743 66196271 ID=MsG0480021940.01.T01:cds;Parent=MsG0480021940.01.T01
Chr4 CDS 66195499 66195616 66195499 ID=MsG0480021940.01.T01:cds;Parent=MsG0480021940.01.T01
Chr4 CDS 66195287 66195394 66195287 ID=MsG0480021940.01.T01:cds;Parent=MsG0480021940.01.T01
Chr4 CDS 66194986 66195158 66194986 ID=MsG0480021940.01.T01:cds;Parent=MsG0480021940.01.T01
Chr4 CDS 66194789 66194888 66194789 ID=MsG0480021940.01.T01:cds;Parent=MsG0480021940.01.T01
Chr4 CDS 66194604 66194678 66194604 ID=MsG0480021940.01.T01:cds;Parent=MsG0480021940.01.T01
Chr4 CDS 66194353 66194483 66194353 ID=MsG0480021940.01.T01:cds;Parent=MsG0480021940.01.T01
Chr4 CDS 66193849 66193984 66193849 ID=MsG0480021940.01.T01:cds;Parent=MsG0480021940.01.T01
Chr4 CDS 66193640 66193759 66193640 ID=MsG0480021940.01.T01:cds;Parent=MsG0480021940.01.T01
Chr4 CDS 66192417 66192563 66192417 ID=MsG0480021940.01.T01:cds;Parent=MsG0480021940.01.T01
Chr4 CDS 66192224 66192328 66192224 ID=MsG0480021940.01.T01:cds;Parent=MsG0480021940.01.T01
Chr4 CDS 66192042 66192143 66192042 ID=MsG0480021940.01.T01:cds;Parent=MsG0480021940.01.T01
Chr4 CDS 66191662 66191910 66191662 ID=MsG0480021940.01.T01:cds;Parent=MsG0480021940.01.T01
Chr4 three_prime_UTR 66191310 66191661 66191310 ID=MsG0480021940.01.T01:three_prime_utr;Parent=MsG0480021940.01.T01
Gene Sequence

>MsG0480021940.01.T01

ATGGACAACAACCGCATCACCTGGCGAACCACCATCCTCACCAATCACCTCCGCCATGACCCACCAACCGCACCAACAATCCTCCACAACTACGCTTGCCTTAGCTACTCTCCTCCCGAACTCTCCGAATCAAATCCAACAACATTCGACACCTTTGAGATGCGAAAGCTCTTGGACGGTCACAATCTGGAAGATCGCGACTGGCTATTCGGGTTGATGATACAGAGCGGACTATTCAACCGGCGGGAAGTCGACGGGAGGGTGTTTGTGAATCCTGATTATAACCAGTCCATGGAACAACAGAGGGAGATGACCATGAAACGAATTGCGTATTTGTTGGATCGTGGTGTTTTTCGTGGGTGGCTTACTGGTGATGGCCCACAAGAAGAGTTGAGGAAGTTGGCTCTTCATGAGGTTATTGGAATGTATGATCATTCTCTTGCTGTTAAGCTTGGTGTTCATATCTTCTTGTGGGGTGGGGCTGTAAAGTTTCTGGGAACCAAGCGTCACCATGACAAGTGGCTGAGAGCTACTGAAAACTATGACATCAAGGGTTGTTTTGCTATGTCTGAGTTGGGCCATGGGAGTAATGTCCGAGGAATTGAAACTGTCACTACTTATGATCCAAATTCTGGTGAGTTTGTCATCAATACTCCGTGTGAGTCAGCTCAGAAGTATTGGATCGGTGGTGCAGCAAATCATGCAACACATACTATAGTCTTTTCACAGCTCAACATAAACGGAAGCAATCAGGGGGTGCATGCTTTTATTGCCCAAATCAGGGATTCAGATGGAAACATATGCCCAAATATCCGAATAGCTGAATGTGGTCACAAAATTGGTTTAAATGGAGTTGATAATGGCCGTATCTGGTTTGACAATGTGAGAATACCCAGAGAGAATTTGTTAAATTCCGTGGCCGACGTTTCACCAAGTGGTGAATACTTGAGTGCAATAAAAAATACAGATCAGAGGTTTGCAGCATTCTTAGCCCCTTTGACCTCTGGTCGTGTAACTATTGCCGTCAGTTCTGTTTACATCTCCAAGATAAGCTTAGCCATTGCTATAAGATATGCATTGACAAGGCGGGCCTTTTCTATTACACCAAATGGGCCTGAGGTTTTACTGCTTGATTACCCAAGTCATCAACAACGTCTATTACCTTTACTTGCGAAGATATATGCAATGAGCTTTTCTGCAATTGAGCTCAAAAAGATGTATGTGAATAGAACGCCTGAGTCAAACAAAGCAATTCATATTGTTTCTAGTGCATACAAGGCTACTTTTACATGGAATAATATGCGTACTCTTCAGGAATGCCGTGAAGCATGTGGAGGACAGGGCGTCAAAACTGAAAACCGTATTGGTCAATTTAAGGGTGAATATGACGTGCATTCAACATTTGAGGGGGACAACAATGTTCTGATGCAGCAGATAAGCAAGGCGCTCCTTGCAGAATACATAGCATGTCAGACAAAAAACAAACCATTTAAAGGTCTTGGATTAGAACATATGAACGGATCTTGTCCTGTCATCCCATCTCAGTTAACAAGTTCTACCATCAAGAGCAGTGAATTTCAGATTGATCTGTTCCACCTAAGAGAGCGAGACCTATTGAAACGTTTTGCTATAGAGGTTTCAGAACATCAATCTCAAGGAAATAGCAAGGAGTCTGCCTTCATTCTAAGTTATCAGCTTGCTGAGGACTTGGGCAGAGCTTTCTCTGAACGAGCAATACTGAAAACATTTATGGAGGCTGAGTCAGCTTTACCAGCCGGTTCATTGAAGGATGTCTTAGGTCTGTTAAGATCGTTATATGCCTTGATTAGTGTGGACGAAGACGCTGCCTTTCTCCGATATGGATACTTGTCAACAGAAAATGCTTCTGTAGTGAGGAAAGAAGTTCCAAAGCTATGTGCTGAACTTCGACCGCATGCACTTGCCTTGGTTAACTCCTTTGGTATTCCTGATGCGTTTTTGAGCCCTATTGCATACAACTGGGTTGAGTCAAATTCTTGGTCTACTGCTCAATATTAA
Protein sequence

>MsG0480021940.01.T01

MDNNRITWRTTILTNHLRHDPPTAPTILHNYACLSYSPPELSESNPTTFDTFEMRKLLDGHNLEDRDWLFGLMIQSGLFNRREVDGRVFVNPDYNQSMEQQREMTMKRIAYLLDRGVFRGWLTGDGPQEELRKLALHEVIGMYDHSLAVKLGVHIFLWGGAVKFLGTKRHHDKWLRATENYDIKGCFAMSELGHGSNVRGIETVTTYDPNSGEFVINTPCESAQKYWIGGAANHATHTIVFSQLNINGSNQGVHAFIAQIRDSDGNICPNIRIAECGHKIGLNGVDNGRIWFDNVRIPRENLLNSVADVSPSGEYLSAIKNTDQRFAAFLAPLTSGRVTIAVSSVYISKISLAIAIRYALTRRAFSITPNGPEVLLLDYPSHQQRLLPLLAKIYAMSFSAIELKKMYVNRTPESNKAIHIVSSAYKATFTWNNMRTLQECREACGGQGVKTENRIGQFKGEYDVHSTFEGDNNVLMQQISKALLAEYIACQTKNKPFKGLGLEHMNGSCPVIPSQLTSSTIKSSEFQIDLFHLRERDLLKRFAIEVSEHQSQGNSKESAFILSYQLAEDLGRAFSERAILKTFMEAESALPAGSLKDVLGLLRSLYALISVDEDAAFLRYGYLSTENASVVRKEVPKLCAELRPHALALVNSFGIPDAFLSPIAYNWVESNSWSTAQY*