AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007391.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007391.01.T01 MTR_2g023930 96.803 563 8 3 1 563 1 553 0.0 1114
MsG0280007391.01.T01 MTR_4g132430 55.031 487 145 21 59 525 27 459 1.69e-139 413
MsG0280007391.01.T01 MTR_2g088000 46.642 551 195 18 62 555 81 589 3.19e-126 383
MsG0280007391.01.T01 MTR_4g132430 57.754 374 97 15 164 525 1 325 4.93e-115 346
MsG0280007391.01.T01 MTR_3g053330 43.388 484 196 14 60 536 32 444 1.03e-107 331
MsG0280007391.01.T01 MTR_4g049760 40.299 536 231 14 67 558 35 525 2.85e-94 299
MsG0280007391.01.T01 MTR_4g049790 39.173 508 230 16 67 543 60 519 6.05e-94 298
MsG0280007391.01.T01 MTR_4g047580 38.417 518 247 18 67 552 30 507 3.14e-90 288
MsG0280007391.01.T01 MTR_7g110720 40.562 498 164 16 67 547 30 412 1.24e-85 273
MsG0280007391.01.T01 MTR_7g110720 51.399 286 67 8 276 547 158 385 4.52e-73 239
MsG0280007391.01.T01 MTR_7g009730 32.391 460 246 10 150 552 47 498 3.59e-56 199
MsG0280007391.01.T01 MTR_2g045360 33.886 422 183 14 143 542 68 415 1.20e-55 194
MsG0280007391.01.T01 MTR_4g107970 36.401 489 235 16 117 537 43 523 2.07e-46 172
MsG0280007391.01.T01 MTR_4g107970 37.946 448 203 15 157 537 7 446 1.01e-45 169
MsG0280007391.01.T01 MTR_4g094412 39.103 312 160 9 92 388 19 315 3.36e-45 166
MsG0280007391.01.T01 MTR_4g094412 39.103 312 160 9 92 388 28 324 4.78e-45 166
MsG0280007391.01.T01 MTR_6g038890 53.548 155 44 7 185 337 90 218 1.38e-36 135
MsG0280007391.01.T01 MTR_5g044695 90.476 63 6 0 275 337 45 107 3.15e-35 128
MsG0280007391.01.T01 MTR_1g013760 33.191 235 110 5 150 383 28 216 1.80e-28 115
MsG0280007391.01.T01 MTR_4g007060 38.816 152 69 4 282 433 103 230 3.55e-27 111
MsG0280007391.01.T01 MTR_4g007060 38.816 152 69 4 282 433 137 264 4.75e-27 112
MsG0280007391.01.T01 MTR_3g056100 31.228 285 141 10 112 369 220 476 1.92e-25 110
MsG0280007391.01.T01 MTR_3g056100 31.228 285 141 10 112 369 76 332 2.86e-25 109
MsG0280007391.01.T01 MTR_3g056100 32.364 275 138 11 112 369 220 463 6.33e-25 109
MsG0280007391.01.T01 MTR_5g094430 55.000 80 35 1 290 369 235 313 7.42e-25 107
MsG0280007391.01.T01 MTR_5g094430 55.000 80 35 1 290 369 213 291 7.92e-25 107
MsG0280007391.01.T01 MTR_3g056100 32.364 275 138 11 112 369 76 319 1.01e-24 107
MsG0280007391.01.T01 MTR_5g094430 55.000 80 35 1 290 369 347 425 2.50e-24 107
MsG0280007391.01.T01 MTR_7g011820 35.294 170 104 3 217 382 317 484 2.53e-24 107
MsG0280007391.01.T01 MTR_1g013790 45.918 98 51 1 302 397 96 193 2.73e-24 102
MsG0280007391.01.T01 MTR_3g106060 50.588 85 42 0 292 376 123 207 3.76e-24 103
MsG0280007391.01.T01 MTR_7g109800 48.421 95 44 2 291 385 129 218 1.72e-23 101
MsG0280007391.01.T01 MTR_3g009470 50.000 90 44 1 280 369 468 556 1.72e-23 105
MsG0280007391.01.T01 MTR_3g009470 44.086 93 50 2 276 368 249 339 1.64e-16 83.6
MsG0280007391.01.T01 MTR_3g031220 53.165 79 36 1 289 367 347 424 2.65e-23 103
MsG0280007391.01.T01 MTR_3g031220 30.872 149 70 4 221 369 143 258 2.99e-11 66.2
MsG0280007391.01.T01 MTR_4g013260 53.165 79 36 1 289 367 318 395 3.13e-23 103
MsG0280007391.01.T01 MTR_4g013260 42.667 75 40 2 293 367 172 243 3.36e-14 75.5
MsG0280007391.01.T01 MTR_5g074400 53.086 81 37 1 289 369 402 481 4.90e-23 103
MsG0280007391.01.T01 MTR_5g074400 51.667 60 27 2 308 367 244 301 1.83e-13 73.6
MsG0280007391.01.T01 MTR_7g071120 52.326 86 40 1 284 369 301 385 5.09e-23 102
MsG0280007391.01.T01 MTR_3g104750 50.000 76 37 1 290 365 87 161 7.09e-23 95.9
MsG0280007391.01.T01 MTR_5g042920 45.918 98 52 1 289 386 302 398 2.20e-22 100
MsG0280007391.01.T01 MTR_5g042920 39.583 96 56 2 308 403 152 245 4.79e-13 71.6
MsG0280007391.01.T01 MTR_2g105060 51.190 84 36 2 289 367 71 154 3.39e-22 96.3
MsG0280007391.01.T01 MTR_2g105060 51.190 84 36 2 289 367 146 229 3.95e-22 97.8
MsG0280007391.01.T01 MTR_5g097490 45.631 103 49 3 282 379 222 322 4.13e-22 99.0
MsG0280007391.01.T01 MTR_5g097490 41.250 80 45 2 305 384 90 167 2.86e-11 65.9
MsG0280007391.01.T01 MTR_4g082580 46.000 100 50 2 284 380 255 353 4.38e-22 99.0
MsG0280007391.01.T01 MTR_4g094588 45.055 91 49 1 294 384 165 254 4.92e-22 97.8
MsG0280007391.01.T01 MTR_1g015140 42.424 99 55 2 267 365 63 159 7.07e-22 92.8
MsG0280007391.01.T01 MTR_2g033820 44.348 115 53 4 291 401 187 294 7.38e-22 98.2
MsG0280007391.01.T01 MTR_7g080020 52.500 80 37 1 290 369 476 554 7.69e-22 100
MsG0280007391.01.T01 MTR_7g080020 50.000 60 28 2 308 367 281 338 2.30e-11 67.0
MsG0280007391.01.T01 MTR_7g028415 53.521 71 32 1 296 366 82 151 8.25e-22 93.2
MsG0280007391.01.T01 MTR_7g028710 53.521 71 32 1 296 366 82 151 8.25e-22 93.2
MsG0280007391.01.T01 MTR_7g080000 52.500 80 37 1 290 369 415 493 1.26e-21 99.8
MsG0280007391.01.T01 MTR_7g080000 47.692 65 32 2 303 367 230 292 1.31e-11 67.8
MsG0280007391.01.T01 MTR_7g079010 35.260 173 98 5 195 365 38 198 2.18e-21 93.2
MsG0280007391.01.T01 MTR_1g086790 43.269 104 57 2 291 393 142 244 8.61e-21 94.0
MsG0280007391.01.T01 MTR_7g100510 41.837 98 56 1 270 367 324 420 1.75e-20 94.7
MsG0280007391.01.T01 MTR_7g100510 51.667 60 27 2 308 367 190 247 2.95e-12 69.3
MsG0280007391.01.T01 MTR_7g109600 45.361 97 44 2 290 380 30 123 2.43e-20 91.3
MsG0280007391.01.T01 MTR_5g043880 50.000 78 38 1 287 364 104 180 8.92e-20 90.1
MsG0280007391.01.T01 MTR_4g122530 47.619 84 42 2 291 374 192 273 1.39e-19 91.7
MsG0280007391.01.T01 MTR_5g091390 50.000 74 36 1 294 367 144 216 3.19e-19 89.0
MsG0280007391.01.T01 MTR_4g130900 49.367 79 37 2 291 367 343 420 4.75e-19 90.9
MsG0280007391.01.T01 MTR_1g009613 48.649 74 38 0 291 364 246 319 5.96e-19 89.0
MsG0280007391.01.T01 MTR_5g016610 50.000 76 38 0 291 366 183 258 6.96e-19 87.4
MsG0280007391.01.T01 MTR_8g007270 48.000 75 38 1 290 364 137 210 8.08e-19 86.3
MsG0280007391.01.T01 MTR_8g087000 59.016 61 25 0 307 367 77 137 8.31e-19 86.7
MsG0280007391.01.T01 MTR_8g087000 59.016 61 25 0 307 367 76 136 9.06e-19 86.3
MsG0280007391.01.T01 MTR_4g094908 49.367 79 40 0 291 369 250 328 1.04e-18 88.2
MsG0280007391.01.T01 MTR_2g032030 51.316 76 37 0 307 382 267 342 1.98e-18 88.6
MsG0280007391.01.T01 MTR_1g070455 46.429 84 45 0 291 374 277 360 2.33e-18 87.4
MsG0280007391.01.T01 MTR_2g016770 56.452 62 27 0 307 368 35 96 2.65e-18 84.3
MsG0280007391.01.T01 MTR_2g016770 56.452 62 27 0 307 368 27 88 3.86e-18 83.6
MsG0280007391.01.T01 MTR_2g083870 54.286 70 32 0 298 367 71 140 3.92e-18 84.7
MsG0280007391.01.T01 MTR_2g032030 51.316 76 37 0 307 382 267 342 4.09e-18 87.4
MsG0280007391.01.T01 MTR_3g095080 46.667 75 39 1 290 364 151 224 4.10e-18 84.3
MsG0280007391.01.T01 MTR_3g095080 46.667 75 39 1 290 364 127 200 4.14e-18 84.0
MsG0280007391.01.T01 MTR_3g095040 47.297 74 38 1 294 367 105 177 6.95e-18 82.8
MsG0280007391.01.T01 MTR_0117s0040 45.652 92 47 1 273 364 43 131 9.43e-18 83.6
MsG0280007391.01.T01 MTR_8g096730 45.570 79 42 1 292 370 55 132 1.09e-17 80.5
MsG0280007391.01.T01 MTR_4g127040 50.000 74 37 0 291 364 229 302 2.03e-17 84.0
MsG0280007391.01.T01 MTR_2g024350 34.074 135 79 3 302 426 3 137 2.04e-17 82.0
MsG0280007391.01.T01 MTR_7g079040 50.000 74 37 0 304 377 151 224 2.26e-17 84.0
MsG0280007391.01.T01 MTR_1g077780 43.478 92 50 2 291 382 46 135 2.94e-17 79.3
MsG0280007391.01.T01 MTR_3g009470 44.086 93 50 2 276 368 249 339 7.31e-17 84.0
MsG0280007391.01.T01 MTR_8g092140 46.053 76 39 2 290 364 142 216 9.08e-17 80.1
MsG0280007391.01.T01 MTR_8g028565 36.036 111 66 1 272 377 115 225 1.07e-16 82.0
MsG0280007391.01.T01 MTR_3g108960 47.297 74 39 0 291 364 298 371 1.09e-16 82.8
MsG0280007391.01.T01 MTR_8g092010 45.946 74 39 1 294 367 95 167 2.47e-16 77.8
MsG0280007391.01.T01 MTR_8g098945 44.444 72 40 0 306 377 128 199 1.64e-15 77.4
MsG0280007391.01.T01 MTR_2g024380 45.455 66 36 0 302 367 246 311 1.86e-15 79.3
MsG0280007391.01.T01 MTR_1g099600 45.205 73 40 0 305 377 183 255 4.67e-15 76.6
MsG0280007391.01.T01 MTR_4g007060 42.857 63 36 0 282 344 137 199 1.59e-14 73.9
MsG0280007391.01.T01 MTR_7g062220 37.190 121 59 3 267 372 70 188 2.07e-14 74.7
MsG0280007391.01.T01 MTR_6g086555 46.667 75 38 2 294 367 193 266 2.81e-14 75.5
MsG0280007391.01.T01 MTR_1g078260 43.056 72 39 2 294 364 234 304 3.21e-13 72.4
MsG0280007391.01.T01 MTR_3g090860 54.237 59 25 1 306 362 132 190 5.63e-13 70.9
MsG0280007391.01.T01 MTR_5g067680 42.529 87 38 2 308 382 203 289 7.81e-13 70.5
MsG0280007391.01.T01 MTR_8g027860 49.275 69 28 2 306 367 135 203 6.53e-12 67.8
MsG0280007391.01.T01 MTR_3g031220 30.872 149 70 4 221 369 143 258 1.61e-11 66.6
MsG0280007391.01.T01 MTR_5g044695 42.735 117 43 6 192 306 8 102 1.99e-11 61.2
MsG0280007391.01.T01 MTR_6g053200 31.373 102 68 2 268 367 289 390 6.80e-11 65.5
MsG0280007391.01.T01 MTR_8g069935 31.461 89 49 1 291 367 303 391 6.91e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007391.01.T01 AT1G62300 51.071 607 184 30 1 549 1 552 1.45e-154 454
MsG0280007391.01.T01 AT4G04450 52.199 523 158 23 62 536 25 503 1.35e-140 417
MsG0280007391.01.T01 AT4G04450 54.967 453 119 21 125 536 1 409 1.48e-128 383
MsG0280007391.01.T01 AT4G22070 52.990 485 167 19 43 479 1 472 8.99e-120 364
MsG0280007391.01.T01 AT4G22070 52.990 485 167 19 43 479 1 472 8.99e-120 364
MsG0280007391.01.T01 AT4G22070 52.990 485 167 19 43 479 1 472 8.99e-120 364
MsG0280007391.01.T01 AT4G22070 52.990 485 167 19 43 479 1 472 8.99e-120 364
MsG0280007391.01.T01 AT4G01720 38.763 485 192 15 67 533 46 443 3.01e-65 221
MsG0280007391.01.T01 AT5G15130 33.906 466 239 13 143 559 35 480 1.60e-50 182
MsG0280007391.01.T01 AT5G15130 33.843 458 234 13 151 559 1 438 5.86e-49 177
MsG0280007391.01.T01 AT1G68150 40.711 253 108 8 146 388 96 316 8.34e-49 174
MsG0280007391.01.T01 AT1G18860 32.990 485 244 12 132 538 30 511 3.26e-45 167
MsG0280007391.01.T01 AT1G69810 33.846 325 191 8 128 437 14 329 2.22e-41 154
MsG0280007391.01.T01 AT1G69810 53.691 149 63 3 290 437 128 271 5.59e-37 140
MsG0280007391.01.T01 AT4G31800 34.156 243 123 5 145 385 47 254 1.30e-31 125
MsG0280007391.01.T01 AT1G80840 32.883 222 94 5 150 367 36 206 4.57e-29 117
MsG0280007391.01.T01 AT4G31800 50.505 99 44 2 292 385 91 189 6.90e-25 103
MsG0280007391.01.T01 AT2G38470 49.451 91 45 1 289 379 344 433 8.77e-25 108
MsG0280007391.01.T01 AT4G26640 53.846 78 35 1 290 367 188 264 6.48e-24 104
MsG0280007391.01.T01 AT4G26640 37.363 91 55 2 277 367 5 93 5.56e-13 71.2
MsG0280007391.01.T01 AT4G26640 53.846 78 35 1 290 367 188 264 6.48e-24 104
MsG0280007391.01.T01 AT4G26640 37.363 91 55 2 277 367 5 93 5.56e-13 71.2
MsG0280007391.01.T01 AT4G26640 53.846 78 35 1 290 367 188 264 6.48e-24 104
MsG0280007391.01.T01 AT4G26640 37.363 91 55 2 277 367 5 93 5.56e-13 71.2
MsG0280007391.01.T01 AT4G26640 53.846 78 35 1 290 367 188 264 6.48e-24 104
MsG0280007391.01.T01 AT4G26640 37.363 91 55 2 277 367 5 93 5.56e-13 71.2
MsG0280007391.01.T01 AT2G25000 48.864 88 45 0 285 372 81 168 1.12e-23 100
MsG0280007391.01.T01 AT2G25000 48.864 88 45 0 285 372 81 168 1.12e-23 100
MsG0280007391.01.T01 AT2G25000 46.237 93 50 0 280 372 98 190 1.31e-23 100
MsG0280007391.01.T01 AT4G26640 53.846 78 35 1 290 367 324 400 1.51e-23 104
MsG0280007391.01.T01 AT4G26640 53.846 78 35 1 290 367 292 368 1.54e-23 104
MsG0280007391.01.T01 AT1G13960 53.571 84 38 1 284 367 233 315 2.01e-23 102
MsG0280007391.01.T01 AT1G13960 51.667 60 27 2 308 367 77 134 2.00e-12 69.3
MsG0280007391.01.T01 AT4G26640 53.846 78 35 1 290 367 364 440 2.04e-23 104
MsG0280007391.01.T01 AT1G29860 36.774 155 86 4 248 396 82 230 2.11e-23 100
MsG0280007391.01.T01 AT2G25000 48.864 88 45 0 285 372 124 211 2.23e-23 100
MsG0280007391.01.T01 AT1G13960 53.571 84 38 1 284 367 386 468 2.62e-23 103
MsG0280007391.01.T01 AT1G13960 51.667 60 27 2 308 367 230 287 1.44e-12 70.5
MsG0280007391.01.T01 AT5G26170 51.389 72 34 1 293 364 99 169 4.44e-23 96.7
MsG0280007391.01.T01 AT5G56270 49.438 89 44 1 281 369 461 548 5.18e-23 103
MsG0280007391.01.T01 AT5G56270 50.820 61 28 2 308 368 274 332 5.79e-12 68.9
MsG0280007391.01.T01 AT5G49520 51.948 77 36 1 291 367 205 280 9.87e-23 100
MsG0280007391.01.T01 AT4G18170 48.913 92 45 2 277 367 141 231 1.03e-22 99.8
MsG0280007391.01.T01 AT2G03340 51.163 86 41 1 284 369 392 476 1.96e-22 101
MsG0280007391.01.T01 AT2G03340 51.667 60 27 2 308 367 251 308 5.87e-13 72.0
MsG0280007391.01.T01 AT5G07100 47.126 87 45 1 281 367 115 200 3.08e-22 95.9
MsG0280007391.01.T01 AT5G07100 41.096 73 42 1 308 380 25 96 2.11e-11 64.3
MsG0280007391.01.T01 AT5G07100 47.126 87 45 1 281 367 115 200 3.08e-22 95.9
MsG0280007391.01.T01 AT5G07100 41.096 73 42 1 308 380 25 96 2.11e-11 64.3
MsG0280007391.01.T01 AT5G07100 47.126 87 45 1 281 367 115 200 3.08e-22 95.9
MsG0280007391.01.T01 AT5G07100 41.096 73 42 1 308 380 25 96 2.11e-11 64.3
MsG0280007391.01.T01 AT5G07100 47.126 87 45 1 281 367 115 200 3.08e-22 95.9
MsG0280007391.01.T01 AT5G07100 41.096 73 42 1 308 380 25 96 2.11e-11 64.3
MsG0280007391.01.T01 AT2G04880 44.828 87 47 1 286 372 262 347 3.32e-22 100
MsG0280007391.01.T01 AT2G04880 46.970 66 33 2 305 370 109 172 3.15e-12 69.3
MsG0280007391.01.T01 AT2G04880 44.828 87 47 1 286 372 286 371 4.69e-22 100
MsG0280007391.01.T01 AT2G04880 46.970 66 33 2 305 370 109 172 3.84e-12 69.3
MsG0280007391.01.T01 AT5G07100 47.126 87 45 1 281 367 208 293 5.30e-22 97.4
MsG0280007391.01.T01 AT5G07100 41.096 73 42 1 308 380 118 189 3.98e-11 64.7
MsG0280007391.01.T01 AT1G64000 48.235 85 43 1 281 365 88 171 6.18e-22 94.4
MsG0280007391.01.T01 AT5G46350 48.864 88 43 2 294 380 170 256 1.06e-21 96.7
MsG0280007391.01.T01 AT3G01080 47.619 84 43 1 284 367 283 365 3.37e-21 96.7
MsG0280007391.01.T01 AT3G01080 51.667 60 27 2 308 367 168 225 2.30e-11 66.6
MsG0280007391.01.T01 AT3G01080 47.619 84 43 1 284 367 321 403 3.92e-21 97.1
MsG0280007391.01.T01 AT3G01080 51.667 60 27 2 308 367 206 263 2.27e-11 66.6
MsG0280007391.01.T01 AT2G30250 51.250 80 38 1 290 369 311 389 6.70e-21 95.5
MsG0280007391.01.T01 AT2G47260 43.243 111 58 2 283 389 150 259 8.06e-21 94.4
MsG0280007391.01.T01 AT2G46130 48.780 82 41 1 284 365 7 87 1.27e-20 87.8
MsG0280007391.01.T01 AT1G55600 44.444 90 49 1 280 369 280 368 1.63e-20 95.1
MsG0280007391.01.T01 AT5G13080 43.000 100 56 1 267 366 27 125 2.11e-20 88.2
MsG0280007391.01.T01 AT4G30935 44.554 101 45 3 291 383 315 412 3.69e-20 94.0
MsG0280007391.01.T01 AT4G26440 45.545 101 52 2 291 391 356 453 5.75e-20 94.0
MsG0280007391.01.T01 AT2G30590 50.000 82 40 1 291 371 297 378 1.03e-19 91.7
MsG0280007391.01.T01 AT1G29280 51.429 70 34 0 298 367 65 134 1.48e-19 89.0
MsG0280007391.01.T01 AT3G01970 43.137 102 57 1 263 364 21 121 1.49e-19 85.9
MsG0280007391.01.T01 AT4G31800 31.683 202 101 5 145 344 47 213 1.82e-19 88.2
MsG0280007391.01.T01 AT1G69310 42.353 85 48 1 280 364 120 203 1.93e-19 89.4
MsG0280007391.01.T01 AT1G69310 42.353 85 48 1 280 364 120 203 1.93e-19 89.4
MsG0280007391.01.T01 AT1G69310 42.353 85 48 1 280 364 120 203 1.93e-19 89.4
MsG0280007391.01.T01 AT5G41570 55.556 72 31 1 294 365 85 155 2.32e-19 86.3
MsG0280007391.01.T01 AT2G44745 40.909 88 51 1 277 364 115 201 2.50e-19 87.4
MsG0280007391.01.T01 AT2G23320 57.627 59 25 0 308 366 241 299 4.58e-19 89.0
MsG0280007391.01.T01 AT5G64810 47.887 71 36 1 294 364 97 166 4.80e-19 85.9
MsG0280007391.01.T01 AT4G24240 50.000 76 38 0 291 366 265 340 1.16e-18 88.2
MsG0280007391.01.T01 AT3G62340 50.000 78 38 1 294 371 105 181 1.18e-18 86.7
MsG0280007391.01.T01 AT5G28650 48.649 74 38 0 291 364 246 319 2.00e-18 87.0
MsG0280007391.01.T01 AT3G58710 52.857 70 33 0 298 367 61 130 2.49e-18 85.9
MsG0280007391.01.T01 AT3G58710 52.857 70 33 0 298 367 62 131 2.53e-18 85.9
MsG0280007391.01.T01 AT4G39410 43.902 82 45 1 283 364 199 279 2.87e-18 86.3
MsG0280007391.01.T01 AT2G34830 48.193 83 42 1 293 374 200 282 9.54e-18 86.3
MsG0280007391.01.T01 AT1G30650 48.193 83 42 1 293 374 202 284 1.08e-17 86.3
MsG0280007391.01.T01 AT3G04670 47.297 74 39 0 291 364 246 319 1.16e-17 84.7
MsG0280007391.01.T01 AT2G24570 48.649 74 38 0 291 364 227 300 1.24e-17 84.7
MsG0280007391.01.T01 AT2G34830 48.193 83 42 1 293 374 209 291 1.30e-17 85.9
MsG0280007391.01.T01 AT4G23550 45.679 81 44 0 302 382 135 215 2.19e-17 83.6
MsG0280007391.01.T01 AT4G31550 47.297 74 39 0 291 364 230 303 2.53e-17 84.0
MsG0280007391.01.T01 AT4G31550 47.297 74 39 0 291 364 229 302 2.61e-17 83.6
MsG0280007391.01.T01 AT4G01250 49.296 71 36 0 307 377 128 198 3.37e-17 82.8
MsG0280007391.01.T01 AT2G37260 49.333 75 34 2 302 373 262 335 7.29e-17 82.8
MsG0280007391.01.T01 AT2G37260 42.105 76 42 2 308 383 84 157 9.35e-14 73.2
MsG0280007391.01.T01 AT2G37260 49.333 75 34 2 302 373 264 337 7.44e-17 82.8
MsG0280007391.01.T01 AT2G37260 42.105 76 42 2 308 383 86 159 9.50e-14 73.2
MsG0280007391.01.T01 AT5G52830 46.753 77 41 0 301 377 159 235 1.13e-16 82.0
MsG0280007391.01.T01 AT2G37260 49.333 75 34 2 302 373 344 417 1.40e-16 82.8
MsG0280007391.01.T01 AT2G37260 42.105 76 42 2 308 383 166 239 1.54e-13 73.2
MsG0280007391.01.T01 AT2G46130 45.122 82 40 2 284 365 7 83 9.82e-16 73.6
MsG0280007391.01.T01 AT1G69310 38.824 85 47 2 280 364 120 199 1.61e-14 74.7
MsG0280007391.01.T01 AT5G45050 54.098 61 28 0 307 367 1180 1240 3.01e-14 76.6
MsG0280007391.01.T01 AT5G45050 50.000 76 36 1 292 367 1028 1101 3.10e-14 76.6
MsG0280007391.01.T01 AT5G45050 54.098 61 28 0 307 367 1152 1212 3.15e-14 76.6
MsG0280007391.01.T01 AT2G21900 43.939 66 36 1 302 367 104 168 6.49e-14 71.2
MsG0280007391.01.T01 AT5G45260 39.216 102 55 3 283 382 1189 1285 3.43e-13 73.2
MsG0280007391.01.T01 AT5G43290 41.667 72 40 2 294 364 100 170 3.75e-13 70.5
MsG0280007391.01.T01 AT3G01080 51.667 60 27 2 308 367 206 263 9.67e-12 67.0
MsG0280007391.01.T01 AT2G46400 41.772 79 44 1 286 362 83 161 1.09e-11 66.2
MsG0280007391.01.T01 AT2G40740 47.297 74 34 2 308 376 174 247 2.82e-11 65.1
MsG0280007391.01.T01 AT2G40740 47.297 74 34 2 308 376 183 256 4.14e-11 64.7

Find 122 sgRNAs with CRISPR-Local

Find 171 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGCCTTGTGTTTCTGATTC+TGG 0.066609 2:+14848556 None:intergenic
CTAAATATTCCTTTGTTCTT+AGG 0.146906 2:-14847322 MsG0280007391.01.T01:exon
ATAGCTCTTGCTAATAAATT+TGG 0.191323 2:+14847819 None:intergenic
CTTTGAAATTGTAATGGATT+TGG 0.230411 2:+14847711 None:intergenic
TTTGTTTATTATATATTATA+TGG 0.269132 2:-14849981 MsG0280007391.01.T01:exon
TTTGAAATTGTAATGGATTT+GGG 0.275227 2:+14847712 None:intergenic
TTGACAGGAAATCCTAAAAT+AGG 0.296916 2:+14849839 None:intergenic
GCCGCTATCTCCTCCATTAT+TGG 0.300387 2:-14847423 MsG0280007391.01.T01:CDS
GCGAGAACAGCGGTGAAATT+AGG 0.306985 2:+14847447 None:intergenic
TGAGAGTGAGATATTGGAAT+TGG 0.324537 2:+14849917 None:intergenic
GCTGCTGCTGCTGTTGTTGT+TGG 0.336978 2:+14847529 None:intergenic
AAAGGGTGAGAGTGAGATAT+TGG 0.336997 2:+14849911 None:intergenic
CTGCTGCTGCTGTTGTTGTT+GGG 0.337391 2:+14847530 None:intergenic
GGATGCCAATGGAGGAAATA+TGG 0.352069 2:-14848302 MsG0280007391.01.T01:CDS
CGCCGTTGGTGTTACGGGTA+AGG 0.353888 2:+14849816 None:intergenic
TAAATCCAATATCATCAAAA+AGG 0.354383 2:-14849702 MsG0280007391.01.T01:CDS
GTCTTCGCCGTTGGTGTTAC+GGG 0.361102 2:+14849811 None:intergenic
TGCATGGCCACCACCAATAA+TGG 0.361861 2:+14847410 None:intergenic
CTTGAGATAGGTACTACTAA+TGG 0.365396 2:-14848688 MsG0280007391.01.T01:CDS
CGTCTTCGCCGTTGGTGTTA+CGG 0.365794 2:+14849810 None:intergenic
CAAGTACCTAGTTTCTTTCA+AGG 0.368680 2:-14847666 MsG0280007391.01.T01:CDS
AGGAATAGCAATGGTAAAAC+TGG 0.382516 2:-14848592 MsG0280007391.01.T01:CDS
CTGCAAAGCCGTGTAATTAC+CGG 0.385725 2:+14849182 None:intergenic
AAAGAGATTAGATATGTTGA+AGG 0.387068 2:+14850048 None:intergenic
AAACTCACTTGTTTGCGAAC+TGG 0.388176 2:+14848212 None:intergenic
TTTGTCCATATTTCCTCCAT+TGG 0.390389 2:+14848297 None:intergenic
TACTACAGATTGATCACTTC+CGG 0.396054 2:+14849479 None:intergenic
AAACTAGGTACTTGATGAAA+TGG 0.398773 2:+14847675 None:intergenic
CCAAGACAATTTCTTGAGAT+AGG 0.405230 2:-14848700 MsG0280007391.01.T01:CDS
CCCCTCAATCCCAAAACATA+TGG 0.412646 2:+14847194 None:intergenic
TGCTGCTGTTGTTGTTGGGT+TGG 0.415813 2:+14847534 None:intergenic
GCAGCAAGCATGTTACTATC+AGG 0.425873 2:-14847873 MsG0280007391.01.T01:CDS
GGCGGTGATAGCAGCGGTGG+CGG 0.446253 2:+14847473 None:intergenic
GCCATAGCTGCTGGTGGTAA+TGG 0.452891 2:+14847918 None:intergenic
CTATAGTATGCTCGAGGACA+TGG 0.465899 2:+14848257 None:intergenic
GGCGGTGACCGGAAAATAAC+CGG 0.466327 2:-14849788 MsG0280007391.01.T01:CDS
GAGATGCTAAGTCATGTTAC+CGG 0.472299 2:-14849201 MsG0280007391.01.T01:CDS
TGAGGTCTTTGAAATTGTAA+TGG 0.474559 2:+14847705 None:intergenic
TTGTGTTCATTTGAAGGTGA+TGG 0.474609 2:+14849734 None:intergenic
GAGAGAGTAAAGAGAGGGAG+AGG 0.480193 2:+14850076 None:intergenic
AGCATACTATAGATGCACTA+TGG 0.487105 2:-14848246 MsG0280007391.01.T01:CDS
ATCTCCTCCATTATTGGTGG+TGG 0.487542 2:-14847417 MsG0280007391.01.T01:CDS
ACGGCGAAGACGGCGGTGAC+CGG 0.490027 2:-14849799 MsG0280007391.01.T01:CDS
TATATTATATGGACAAAGCA+TGG 0.490606 2:-14849970 MsG0280007391.01.T01:exon
GTGTTACGGGTAAGGTTGAC+AGG 0.491562 2:+14849824 None:intergenic
ATTTGCTTGATCTGCAACAT+TGG 0.493278 2:+14848498 None:intergenic
TGTTGTTGCTATTGTTTGCA+TGG 0.494244 2:+14847394 None:intergenic
TGCTAGATCAGAAGCTTCAA+TGG 0.495447 2:-14848437 MsG0280007391.01.T01:intron
TGCCGAGGACAAAACAATCT+TGG 0.496599 2:-14847970 MsG0280007391.01.T01:CDS
TGTTGGTTGTGTTCATTTGA+AGG 0.504024 2:+14849728 None:intergenic
CAGAATCAGAAACACAAGGC+TGG 0.504762 2:-14848555 MsG0280007391.01.T01:CDS
AATAGGAAACATTCTATCGT+TGG 0.514918 2:+14849856 None:intergenic
AGAATCAGAAACACAAGGCT+GGG 0.517077 2:-14848554 MsG0280007391.01.T01:CDS
CCATTGCTATTCCTCATCTG+AGG 0.520104 2:+14848601 None:intergenic
GTGAGATCTAATGTAACAGT+AGG 0.521520 2:+14847747 None:intergenic
AGAAAAGAAATCGACTTCAC+CGG 0.522609 2:+14849769 None:intergenic
ATATTATATGGACAAAGCAT+GGG 0.526634 2:-14849969 MsG0280007391.01.T01:exon
GATCAATCTGTAGTAGATGA+TGG 0.527093 2:-14849471 MsG0280007391.01.T01:CDS
AATTGCAAGTGGAGCTTCAA+CGG 0.528483 2:-14849251 MsG0280007391.01.T01:CDS
ATATATAATAAACAAACAAA+AGG 0.528509 2:+14849988 None:intergenic
TCTTCCTTGTTCAACAAGCA+TGG 0.531673 2:-14847796 MsG0280007391.01.T01:CDS
GTCACCGCCGTCTTCGCCGT+TGG 0.533790 2:+14849802 None:intergenic
GGATCAATGTCAAGTGCAGA+TGG 0.534800 2:-14847852 MsG0280007391.01.T01:CDS
GGTCTTCAATTGTCTCAAGA+AGG 0.538344 2:-14847585 MsG0280007391.01.T01:CDS
ATAGCAATGGTAAAACTGGT+AGG 0.540414 2:-14848588 MsG0280007391.01.T01:CDS
ATCTTGGTAACAACATATGA+AGG 0.541003 2:-14847954 MsG0280007391.01.T01:CDS
TCCATTACCACCAGCAGCTA+TGG 0.541740 2:-14847919 MsG0280007391.01.T01:CDS
CGTAACACCAACGGCGAAGA+CGG 0.544973 2:-14849809 MsG0280007391.01.T01:CDS
GATGCCATTGCCATAGCTGC+TGG 0.545474 2:+14847909 None:intergenic
CCAAGGTGTTGGTGGAGCAA+TGG 0.549924 2:-14848725 MsG0280007391.01.T01:CDS
GAATCACCACACTGAAAATG+AGG 0.553361 2:-14849133 MsG0280007391.01.T01:intron
TGATATTGGATTTAACATGT+TGG 0.558451 2:+14849711 None:intergenic
CCATTGCTCCACCAACACCT+TGG 0.560146 2:+14848725 None:intergenic
ATTAACATGGATATTAGAAG+TGG 0.561723 2:+14849652 None:intergenic
GAATACGAGAGAGTAAAGAG+AGG 0.565830 2:+14850070 None:intergenic
CCTATCTCAAGAAATTGTCT+TGG 0.566117 2:+14848700 None:intergenic
TCAGCTTGCACAATTGCAAG+TGG 0.569056 2:-14849262 MsG0280007391.01.T01:intron
AATACGAGAGAGTAAAGAGA+GGG 0.570641 2:+14850071 None:intergenic
TTGTTGGGTTGGAGCTTGTG+TGG 0.572140 2:+14847545 None:intergenic
ATATAATTGCAGATAAGTGA+TGG 0.573518 2:-14848323 MsG0280007391.01.T01:intron
TCATGTTACCGGTAATTACA+CGG 0.577854 2:-14849190 MsG0280007391.01.T01:CDS
ACAACCTTCTTTAGCTGACT+CGG 0.578182 2:-14847502 MsG0280007391.01.T01:CDS
GCTATCTCCTCCATTATTGG+TGG 0.580667 2:-14847420 MsG0280007391.01.T01:CDS
ACCAATAATGGAGGAGATAG+CGG 0.580718 2:+14847422 None:intergenic
TTCTGTCCTTGAAAGAAACT+AGG 0.586929 2:+14847660 None:intergenic
ACATGGATATTAGAAGTGGA+AGG 0.594815 2:+14849656 None:intergenic
TAACATGCTTGCTGCTGCTG+AGG 0.595156 2:+14847881 None:intergenic
TAGCAATGGTAAAACTGGTA+GGG 0.595770 2:-14848587 MsG0280007391.01.T01:CDS
TAAGGAAGCTTACATTAACA+TGG 0.598862 2:+14849639 None:intergenic
TCGTTGGTATAAGTAGATGA+TGG 0.603216 2:+14849872 None:intergenic
AACCTTACCCGTAACACCAA+CGG 0.603945 2:-14849818 MsG0280007391.01.T01:CDS
AATGAGAAAAGCTCGTGTCT+CGG 0.604308 2:-14848464 MsG0280007391.01.T01:CDS
TCTAATGTAACAGTAGGGAA+TGG 0.608110 2:+14847753 None:intergenic
GGCTTTGCAGATGCAACTTG+TGG 0.608912 2:-14849169 MsG0280007391.01.T01:CDS
CTTCAATTGTCTCAAGAAGG+TGG 0.609272 2:-14847582 MsG0280007391.01.T01:CDS
CTGACCGAGTCAGCTAAAGA+AGG 0.612594 2:+14847498 None:intergenic
GGTTTACAACTTGCAAACAC+CGG 0.613072 2:-14849498 MsG0280007391.01.T01:CDS
ATCGGCGGTGATAGCAGCGG+TGG 0.617279 2:+14847470 None:intergenic
TGAGATCTAATGTAACAGTA+GGG 0.618128 2:+14847748 None:intergenic
GTTGCCATGCTTGTTGAACA+AGG 0.625899 2:+14847792 None:intergenic
GATCAAACACACCTCAGATG+AGG 0.626860 2:-14848612 MsG0280007391.01.T01:CDS
ACCACCAGCAGCTATGGCAA+TGG 0.626876 2:-14847913 MsG0280007391.01.T01:CDS
ATAGGTTCAACGTTGTGCCG+AGG 0.627663 2:-14847985 MsG0280007391.01.T01:intron
TATAGATGCACTATGGCAGT+CGG 0.632166 2:-14848239 MsG0280007391.01.T01:CDS
TGATGAAATGGTGCATGTTG+AGG 0.633017 2:+14847687 None:intergenic
TAGCTGCTGGTGGTAATGGA+TGG 0.633923 2:+14847922 None:intergenic
AACAAGGAACCTAAGAACAA+AGG 0.634270 2:+14847313 None:intergenic
GAATCAGAAACACAAGGCTG+GGG 0.640268 2:-14848553 MsG0280007391.01.T01:CDS
AGCGGTGAAATTAGGATCGG+CGG 0.644865 2:+14847455 None:intergenic
AACAGCGGTGAAATTAGGAT+CGG 0.645945 2:+14847452 None:intergenic
TAAGTGATGGATGCCAATGG+AGG 0.670782 2:-14848310 MsG0280007391.01.T01:CDS
AACACCAACGGCGAAGACGG+CGG 0.671264 2:-14849806 MsG0280007391.01.T01:CDS
GTGCATCTATAGTATGCTCG+AGG 0.675667 2:+14848251 None:intergenic
CCTCAGATGAGGAATAGCAA+TGG 0.676716 2:-14848601 MsG0280007391.01.T01:CDS
TATTATATGGACAAAGCATG+GGG 0.678619 2:-14849968 MsG0280007391.01.T01:exon
AGGATCGGCGGTGATAGCAG+CGG 0.681008 2:+14847467 None:intergenic
GCCATTGCCATAGCTGCTGG+TGG 0.689582 2:+14847912 None:intergenic
ATGGCCACCACCAATAATGG+AGG 0.694001 2:+14847413 None:intergenic
TAAACGCGCTAAGACTACTG+AGG 0.707106 2:-14849427 MsG0280007391.01.T01:intron
AGATAAGTGATGGATGCCAA+TGG 0.716557 2:-14848313 MsG0280007391.01.T01:CDS
GATAGCGGCTGCGAGAACAG+CGG 0.719593 2:+14847437 None:intergenic
AGTCCAGAATCAGAAACACA+AGG 0.719780 2:-14848559 MsG0280007391.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATATATATTTTTAAAAA+AGG + Chr2:14849970-14849989 None:intergenic 0.0%
!! AATTAATATTGTTAAAATTC+AGG - Chr2:14848463-14848482 MsG0280007391.01.T01:CDS 10.0%
!! ATAGAAAGAAATTAAAAAAA+AGG + Chr2:14847648-14847667 None:intergenic 10.0%
!! ATATATAATAAACAAACAAA+AGG + Chr2:14847254-14847273 None:intergenic 10.0%
!! TTAAATATGAGAAATTAATA+AGG + Chr2:14847621-14847640 None:intergenic 10.0%
!! AATTAAATCACAATTGATTA+AGG - Chr2:14848844-14848863 MsG0280007391.01.T01:intron 15.0%
!! TAATATTTATCTGAAAAACA+AGG + Chr2:14849945-14849964 None:intergenic 15.0%
!!! ATTGATGTTTTTTTGTTAAT+AGG - Chr2:14849236-14849255 MsG0280007391.01.T01:CDS 15.0%
!!! TTTTTTCAAATATTATAGAC+TGG - Chr2:14847720-14847739 MsG0280007391.01.T01:CDS 15.0%
!! GTTTATATATCAATTTCATC+CGG + Chr2:14847943-14847962 None:intergenic 20.0%
!! TAAATCCAATATCATCAAAA+AGG - Chr2:14847537-14847556 MsG0280007391.01.T01:CDS 20.0%
!! TATGGAATTCAAATCTTAAA+TGG - Chr2:14848227-14848246 MsG0280007391.01.T01:CDS 20.0%
!!! ATTATTCCTTTTTTTGTACA+TGG - Chr2:14849985-14850004 MsG0280007391.01.T01:five_prime_UTR 20.0%
!!! TATAATCAGTCAAAATTTTC+TGG - Chr2:14849633-14849652 MsG0280007391.01.T01:intron 20.0%
!!! TTATTCCTTTTTTTGTACAT+GGG - Chr2:14849986-14850005 MsG0280007391.01.T01:five_prime_UTR 20.0%
!!! TTTGAAATTGTAATGGATTT+GGG + Chr2:14849530-14849549 None:intergenic 20.0%
! AAAGAGATTAGATATGTTGA+AGG + Chr2:14847194-14847213 None:intergenic 25.0%
! AATTTAGAAAAAGCGACATT+TGG + Chr2:14849104-14849123 None:intergenic 25.0%
! ATAGCTCTTGCTAATAAATT+TGG + Chr2:14849423-14849442 None:intergenic 25.0%
! ATATAATTGCAGATAAGTGA+TGG - Chr2:14848916-14848935 MsG0280007391.01.T01:intron 25.0%
! ATATTATATGGACAAAGCAT+GGG - Chr2:14847270-14847289 MsG0280007391.01.T01:three_prime_UTR 25.0%
! ATTAACATGGATATTAGAAG+TGG + Chr2:14847590-14847609 None:intergenic 25.0%
! CAATCTGGCATATAATATAA+GGG + Chr2:14848429-14848448 None:intergenic 25.0%
! CTAAATATTCCTTTGTTCTT+AGG - Chr2:14849917-14849936 MsG0280007391.01.T01:CDS 25.0%
! GACTTTGTAAACTCAAAATA+TGG - Chr2:14848209-14848228 MsG0280007391.01.T01:intron 25.0%
! TATATTATATGGACAAAGCA+TGG - Chr2:14847269-14847288 MsG0280007391.01.T01:three_prime_UTR 25.0%
! TGATATTGGATTTAACATGT+TGG + Chr2:14847531-14847550 None:intergenic 25.0%
! TTATTAACATGTTACCAATC+TGG + Chr2:14848444-14848463 None:intergenic 25.0%
!! AATACAATTAGCAACTTTTC+AGG - Chr2:14849891-14849910 MsG0280007391.01.T01:CDS 25.0%
!! ATGCAACTAGTAATTTTATG+TGG - Chr2:14847911-14847930 MsG0280007391.01.T01:CDS 25.0%
!! GATAGAATGTTTCCTATTTT+AGG - Chr2:14847388-14847407 MsG0280007391.01.T01:CDS 25.0%
!! TAATTTTATGTGGTCTTTAC+CGG - Chr2:14847921-14847940 MsG0280007391.01.T01:CDS 25.0%
!! TTTCTAACTGAATTTTGTGA+TGG - Chr2:14848891-14848910 MsG0280007391.01.T01:intron 25.0%
!!! AATATTTTCTGAGACTTGTT+TGG + Chr2:14848713-14848732 None:intergenic 25.0%
!!! AATCTCCTTTTTGATGATAT+TGG + Chr2:14847545-14847564 None:intergenic 25.0%
!!! CATTTGGACTATTTTTTTAG+TGG + Chr2:14849088-14849107 None:intergenic 25.0%
!!! CTTTGAAATTGTAATGGATT+TGG + Chr2:14849531-14849550 None:intergenic 25.0%
!!! GTTTTTAGTCCATATGTTTT+GGG - Chr2:14850036-14850055 MsG0280007391.01.T01:five_prime_UTR 25.0%
!!! TGTTTTTAGTCCATATGTTT+TGG - Chr2:14850035-14850054 MsG0280007391.01.T01:five_prime_UTR 25.0%
AAACTAGGTACTTGATGAAA+TGG + Chr2:14849567-14849586 None:intergenic 30.0%
AATAGGAAACATTCTATCGT+TGG + Chr2:14847386-14847405 None:intergenic 30.0%
ACTTTCCCATGTACAAAAAA+AGG + Chr2:14849994-14850013 None:intergenic 30.0%
CCAATCTGGCATATAATATA+AGG + Chr2:14848430-14848449 None:intergenic 30.0%
CCTTATATTATATGCCAGAT+TGG - Chr2:14848427-14848446 MsG0280007391.01.T01:intron 30.0%
GAGGAAATATGGACAAAAAA+TGG - Chr2:14848948-14848967 MsG0280007391.01.T01:intron 30.0%
TAAGGAAGCTTACATTAACA+TGG + Chr2:14847603-14847622 None:intergenic 30.0%
TATGGACAAAAAATGGCTAA+AGG - Chr2:14848955-14848974 MsG0280007391.01.T01:intron 30.0%
TATTATATGGACAAAGCATG+GGG - Chr2:14847271-14847290 MsG0280007391.01.T01:three_prime_UTR 30.0%
TGAGATCTAATGTAACAGTA+GGG + Chr2:14849494-14849513 None:intergenic 30.0%
TTAGAGACGAAATTAGAGAT+AGG - Chr2:14849123-14849142 MsG0280007391.01.T01:intron 30.0%
TTAGTATACTAACATCATGC+AGG + Chr2:14848305-14848324 None:intergenic 30.0%
TTCATGACATGTCAATTTAG+TGG - Chr2:14848177-14848196 MsG0280007391.01.T01:intron 30.0%
TTGACAGGAAATCCTAAAAT+AGG + Chr2:14847403-14847422 None:intergenic 30.0%
! ATCTTGGTAACAACATATGA+AGG - Chr2:14849285-14849304 MsG0280007391.01.T01:intron 30.0%
! TAATTACCTCATTTTCAGTG+TGG + Chr2:14848115-14848134 None:intergenic 30.0%
!! TGAGGTCTTTGAAATTGTAA+TGG + Chr2:14849537-14849556 None:intergenic 30.0%
!!! GCTGTTTTGAAGGTAAAAAA+GGG + Chr2:14847348-14847367 None:intergenic 30.0%
AAAACTGAGGAGAAAAACCA+AGG - Chr2:14848497-14848516 MsG0280007391.01.T01:CDS 35.0%
AACAAGGAACCTAAGAACAA+AGG + Chr2:14849929-14849948 None:intergenic 35.0%
AATACGAGAGAGTAAAGAGA+GGG + Chr2:14847171-14847190 None:intergenic 35.0%
ACATGGATATTAGAAGTGGA+AGG + Chr2:14847586-14847605 None:intergenic 35.0%
AGCATACTATAGATGCACTA+TGG - Chr2:14848993-14849012 MsG0280007391.01.T01:intron 35.0%
AGGAATAGCAATGGTAAAAC+TGG - Chr2:14848647-14848666 MsG0280007391.01.T01:CDS 35.0%
ATAGCAATGGTAAAACTGGT+AGG - Chr2:14848651-14848670 MsG0280007391.01.T01:CDS 35.0%
ATTTGCTTGATCTGCAACAT+TGG + Chr2:14848744-14848763 None:intergenic 35.0%
CAAGTACCTAGTTTCTTTCA+AGG - Chr2:14849573-14849592 MsG0280007391.01.T01:intron 35.0%
CCAAGACAATTTCTTGAGAT+AGG - Chr2:14848539-14848558 MsG0280007391.01.T01:CDS 35.0%
CCTATCTCAAGAAATTGTCT+TGG + Chr2:14848542-14848561 None:intergenic 35.0%
CTTGAGATAGGTACTACTAA+TGG - Chr2:14848551-14848570 MsG0280007391.01.T01:CDS 35.0%
GATCAATCTGTAGTAGATGA+TGG - Chr2:14847768-14847787 MsG0280007391.01.T01:CDS 35.0%
GGTTGTTAATGCAAAAACTG+AGG - Chr2:14848484-14848503 MsG0280007391.01.T01:CDS 35.0%
GTGAGATCTAATGTAACAGT+AGG + Chr2:14849495-14849514 None:intergenic 35.0%
TACTACAGATTGATCACTTC+CGG + Chr2:14847763-14847782 None:intergenic 35.0%
TAGCAATGGTAAAACTGGTA+GGG - Chr2:14848652-14848671 MsG0280007391.01.T01:CDS 35.0%
TCATGTTACCGGTAATTACA+CGG - Chr2:14848049-14848068 MsG0280007391.01.T01:intron 35.0%
TCGTTGGTATAAGTAGATGA+TGG + Chr2:14847370-14847389 None:intergenic 35.0%
TCTAATGTAACAGTAGGGAA+TGG + Chr2:14849489-14849508 None:intergenic 35.0%
TGAGAGTGAGATATTGGAAT+TGG + Chr2:14847325-14847344 None:intergenic 35.0%
TTCTGTCCTTGAAAGAAACT+AGG + Chr2:14849582-14849601 None:intergenic 35.0%
TTGTGTTCATTTGAAGGTGA+TGG + Chr2:14847508-14847527 None:intergenic 35.0%
TTTGTCCATATTTCCTCCAT+TGG + Chr2:14848945-14848964 None:intergenic 35.0%
! AGAAAAGAAATCGACTTCAC+CGG + Chr2:14847473-14847492 None:intergenic 35.0%
! TGTTGGTTGTGTTCATTTGA+AGG + Chr2:14847514-14847533 None:intergenic 35.0%
! TGTTGTTGCTATTGTTTGCA+TGG + Chr2:14849848-14849867 None:intergenic 35.0%
!! TACCAAGATTGTTTTGTCCT+CGG + Chr2:14849274-14849293 None:intergenic 35.0%
!!! GGCTGTTTTGAAGGTAAAAA+AGG + Chr2:14847349-14847368 None:intergenic 35.0%
!!! TCCATATGTTTTGGGATTGA+GGG - Chr2:14850044-14850063 MsG0280007391.01.T01:five_prime_UTR 35.0%
AAACTCACTTGTTTGCGAAC+TGG + Chr2:14849030-14849049 None:intergenic 40.0%
AAAGGGTGAGAGTGAGATAT+TGG + Chr2:14847331-14847350 None:intergenic 40.0%
AACAGCGGTGAAATTAGGAT+CGG + Chr2:14849790-14849809 None:intergenic 40.0%
AATGAGAAAAGCTCGTGTCT+CGG - Chr2:14848775-14848794 MsG0280007391.01.T01:intron 40.0%
AATTGCAAGTGGAGCTTCAA+CGG - Chr2:14847988-14848007 MsG0280007391.01.T01:intron 40.0%
ACAACCTTCTTTAGCTGACT+CGG - Chr2:14849737-14849756 MsG0280007391.01.T01:CDS 40.0%
AGAATCAGAAACACAAGGCT+GGG - Chr2:14848685-14848704 MsG0280007391.01.T01:CDS 40.0%
AGTCCAGAATCAGAAACACA+AGG - Chr2:14848680-14848699 MsG0280007391.01.T01:CDS 40.0%
CTTCAATTGTCTCAAGAAGG+TGG - Chr2:14849657-14849676 MsG0280007391.01.T01:CDS 40.0%
GAATACGAGAGAGTAAAGAG+AGG + Chr2:14847172-14847191 None:intergenic 40.0%
GAATCACCACACTGAAAATG+AGG - Chr2:14848106-14848125 MsG0280007391.01.T01:intron 40.0%
GAGATGCTAAGTCATGTTAC+CGG - Chr2:14848038-14848057 MsG0280007391.01.T01:intron 40.0%
GGTCTTCAATTGTCTCAAGA+AGG - Chr2:14849654-14849673 MsG0280007391.01.T01:CDS 40.0%
GGTTTACAACTTGCAAACAC+CGG - Chr2:14847741-14847760 MsG0280007391.01.T01:CDS 40.0%
TATAGATGCACTATGGCAGT+CGG - Chr2:14849000-14849019 MsG0280007391.01.T01:intron 40.0%
TCTTCCTTGTTCAACAAGCA+TGG - Chr2:14849443-14849462 MsG0280007391.01.T01:CDS 40.0%
TGATGAAATGGTGCATGTTG+AGG + Chr2:14849555-14849574 None:intergenic 40.0%
TGCTAGATCAGAAGCTTCAA+TGG - Chr2:14848802-14848821 MsG0280007391.01.T01:intron 40.0%
! ACCAATAATGGAGGAGATAG+CGG + Chr2:14849820-14849839 None:intergenic 40.0%
! AGAAGTGGAAGGCTTTTCAT+CGG + Chr2:14847575-14847594 None:intergenic 40.0%
!! AGATAAGTGATGGATGCCAA+TGG - Chr2:14848926-14848945 MsG0280007391.01.T01:intron 40.0%
!! GTAGATGATGGCTGTTTTGA+AGG + Chr2:14847358-14847377 None:intergenic 40.0%
!!! CCATATGTTTTGGGATTGAG+GGG - Chr2:14850045-14850064 MsG0280007391.01.T01:five_prime_UTR 40.0%
!!! GTCCATATGTTTTGGGATTG+AGG - Chr2:14850043-14850062 MsG0280007391.01.T01:five_prime_UTR 40.0%
AACCTTACCCGTAACACCAA+CGG - Chr2:14847421-14847440 MsG0280007391.01.T01:CDS 45.0%
ATCTCCTCCATTATTGGTGG+TGG - Chr2:14849822-14849841 MsG0280007391.01.T01:CDS 45.0%
CAGAATCAGAAACACAAGGC+TGG - Chr2:14848684-14848703 MsG0280007391.01.T01:CDS 45.0%
CCCCTCAATCCCAAAACATA+TGG + Chr2:14850048-14850067 None:intergenic 45.0%
CCTCAGATGAGGAATAGCAA+TGG - Chr2:14848638-14848657 MsG0280007391.01.T01:CDS 45.0%
CTATAGTATGCTCGAGGACA+TGG + Chr2:14848985-14849004 None:intergenic 45.0%
CTGCAAAGCCGTGTAATTAC+CGG + Chr2:14848060-14848079 None:intergenic 45.0%
GAATCAGAAACACAAGGCTG+GGG - Chr2:14848686-14848705 MsG0280007391.01.T01:CDS 45.0%
GAGGAGAAAAACCAAGGTGT+TGG - Chr2:14848503-14848522 MsG0280007391.01.T01:CDS 45.0%
GATCAAACACACCTCAGATG+AGG - Chr2:14848627-14848646 MsG0280007391.01.T01:CDS 45.0%
GCAGCAAGCATGTTACTATC+AGG - Chr2:14849366-14849385 MsG0280007391.01.T01:intron 45.0%
GCTATCTCCTCCATTATTGG+TGG - Chr2:14849819-14849838 MsG0280007391.01.T01:CDS 45.0%
GGATCAATGTCAAGTGCAGA+TGG - Chr2:14849387-14849406 MsG0280007391.01.T01:intron 45.0%
GGATGCCAATGGAGGAAATA+TGG - Chr2:14848937-14848956 MsG0280007391.01.T01:intron 45.0%
GTGCATCTATAGTATGCTCG+AGG + Chr2:14848991-14849010 None:intergenic 45.0%
TAAACGCGCTAAGACTACTG+AGG - Chr2:14847812-14847831 MsG0280007391.01.T01:CDS 45.0%
TCAGCTTGCACAATTGCAAG+TGG - Chr2:14847977-14847996 MsG0280007391.01.T01:CDS 45.0%
TGCCGAGGACAAAACAATCT+TGG - Chr2:14849269-14849288 MsG0280007391.01.T01:intron 45.0%
! CAGCCTTGTGTTTCTGATTC+TGG + Chr2:14848686-14848705 None:intergenic 45.0%
! CCATTGCTATTCCTCATCTG+AGG + Chr2:14848641-14848660 None:intergenic 45.0%
! GTTGCCATGCTTGTTGAACA+AGG + Chr2:14849450-14849469 None:intergenic 45.0%
!! CGACTTCACCGGTTATTTTC+CGG + Chr2:14847462-14847481 None:intergenic 45.0%
!! GAGAAAAACCAAGGTGTTGG+TGG - Chr2:14848506-14848525 MsG0280007391.01.T01:CDS 45.0%
!! TAAGTGATGGATGCCAATGG+AGG - Chr2:14848929-14848948 MsG0280007391.01.T01:intron 45.0%
!! TTTGTTTATTATATATTATA+TGG - Chr2:14847258-14847277 MsG0280007391.01.T01:three_prime_UTR 5.0%
AGCGGTGAAATTAGGATCGG+CGG + Chr2:14849787-14849806 None:intergenic 50.0%
ATAGGTTCAACGTTGTGCCG+AGG - Chr2:14849254-14849273 MsG0280007391.01.T01:CDS 50.0%
ATGGCCACCACCAATAATGG+AGG + Chr2:14849829-14849848 None:intergenic 50.0%
CTGACCGAGTCAGCTAAAGA+AGG + Chr2:14849744-14849763 None:intergenic 50.0%
GAGAGAGTAAAGAGAGGGAG+AGG + Chr2:14847166-14847185 None:intergenic 50.0%
GCCGCTATCTCCTCCATTAT+TGG - Chr2:14849816-14849835 MsG0280007391.01.T01:CDS 50.0%
GCGAGAACAGCGGTGAAATT+AGG + Chr2:14849795-14849814 None:intergenic 50.0%
GGCTTTGCAGATGCAACTTG+TGG - Chr2:14848070-14848089 MsG0280007391.01.T01:intron 50.0%
GTGTTACGGGTAAGGTTGAC+AGG + Chr2:14847418-14847437 None:intergenic 50.0%
TCCATTACCACCAGCAGCTA+TGG - Chr2:14849320-14849339 MsG0280007391.01.T01:intron 50.0%
TGCATGGCCACCACCAATAA+TGG + Chr2:14849832-14849851 None:intergenic 50.0%
! CTGCTGCTGCTGTTGTTGTT+GGG + Chr2:14849712-14849731 None:intergenic 50.0%
! TAACATGCTTGCTGCTGCTG+AGG + Chr2:14849361-14849380 None:intergenic 50.0%
! TGCTGCTGTTGTTGTTGGGT+TGG + Chr2:14849708-14849727 None:intergenic 50.0%
!! TAGCTGCTGGTGGTAATGGA+TGG + Chr2:14849320-14849339 None:intergenic 50.0%
!! TTGTTGGGTTGGAGCTTGTG+TGG + Chr2:14849697-14849716 None:intergenic 50.0%
ACCACCAGCAGCTATGGCAA+TGG - Chr2:14849326-14849345 MsG0280007391.01.T01:intron 55.0%
CCATTGCTCCACCAACACCT+TGG + Chr2:14848517-14848536 None:intergenic 55.0%
CGTAACACCAACGGCGAAGA+CGG - Chr2:14847430-14847449 MsG0280007391.01.T01:CDS 55.0%
GATGCCATTGCCATAGCTGC+TGG + Chr2:14849333-14849352 None:intergenic 55.0%
GCCATAGCTGCTGGTGGTAA+TGG + Chr2:14849324-14849343 None:intergenic 55.0%
GCTGCTGCTGCTGTTGTTGT+TGG + Chr2:14849713-14849732 None:intergenic 55.0%
GGCGGTGACCGGAAAATAAC+CGG - Chr2:14847451-14847470 MsG0280007391.01.T01:CDS 55.0%
!! CCAAGGTGTTGGTGGAGCAA+TGG - Chr2:14848514-14848533 MsG0280007391.01.T01:CDS 55.0%
!! CGTCTTCGCCGTTGGTGTTA+CGG + Chr2:14847432-14847451 None:intergenic 55.0%
!! GTCTTCGCCGTTGGTGTTAC+GGG + Chr2:14847431-14847450 None:intergenic 55.0%
AACACCAACGGCGAAGACGG+CGG - Chr2:14847433-14847452 MsG0280007391.01.T01:CDS 60.0%
AGGATCGGCGGTGATAGCAG+CGG + Chr2:14849775-14849794 None:intergenic 60.0%
GCCATTGCCATAGCTGCTGG+TGG + Chr2:14849330-14849349 None:intergenic 60.0%
! GATAGCGGCTGCGAGAACAG+CGG + Chr2:14849805-14849824 None:intergenic 60.0%
!! CGCCGTTGGTGTTACGGGTA+AGG + Chr2:14847426-14847445 None:intergenic 60.0%
ATCGGCGGTGATAGCAGCGG+TGG + Chr2:14849772-14849791 None:intergenic 65.0%
ACGGCGAAGACGGCGGTGAC+CGG - Chr2:14847440-14847459 MsG0280007391.01.T01:CDS 70.0%
GGCGGTGATAGCAGCGGTGG+CGG + Chr2:14849769-14849788 None:intergenic 70.0%
GTCACCGCCGTCTTCGCCGT+TGG + Chr2:14847440-14847459 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 14847158 14850103 14847158 ID=MsG0280007391.01;Name=MsG0280007391.01
Chr2 mRNA 14847158 14850103 14847158 ID=MsG0280007391.01.T01;Parent=MsG0280007391.01;Name=MsG0280007391.01.T01;_AED=0.17;_eAED=0.17;_QI=119|1|1|1|1|1|6|183|563
Chr2 exon 14847158 14848003 14847158 ID=MsG0280007391.01.T01:exon:4154;Parent=MsG0280007391.01.T01
Chr2 exon 14848220 14848333 14848220 ID=MsG0280007391.01.T01:exon:4153;Parent=MsG0280007391.01.T01
Chr2 exon 14848438 14848776 14848438 ID=MsG0280007391.01.T01:exon:4152;Parent=MsG0280007391.01.T01
Chr2 exon 14849134 14849280 14849134 ID=MsG0280007391.01.T01:exon:4151;Parent=MsG0280007391.01.T01
Chr2 exon 14849428 14849523 14849428 ID=MsG0280007391.01.T01:exon:4150;Parent=MsG0280007391.01.T01
Chr2 exon 14849652 14850103 14849652 ID=MsG0280007391.01.T01:exon:4149;Parent=MsG0280007391.01.T01
Chr2 five_prime_UTR 14849985 14850103 14849985 ID=MsG0280007391.01.T01:five_prime_utr;Parent=MsG0280007391.01.T01
Chr2 CDS 14849652 14849984 14849652 ID=MsG0280007391.01.T01:cds;Parent=MsG0280007391.01.T01
Chr2 CDS 14849428 14849523 14849428 ID=MsG0280007391.01.T01:cds;Parent=MsG0280007391.01.T01
Chr2 CDS 14849134 14849280 14849134 ID=MsG0280007391.01.T01:cds;Parent=MsG0280007391.01.T01
Chr2 CDS 14848438 14848776 14848438 ID=MsG0280007391.01.T01:cds;Parent=MsG0280007391.01.T01
Chr2 CDS 14848220 14848333 14848220 ID=MsG0280007391.01.T01:cds;Parent=MsG0280007391.01.T01
Chr2 CDS 14847341 14848003 14847341 ID=MsG0280007391.01.T01:cds;Parent=MsG0280007391.01.T01
Chr2 three_prime_UTR 14847158 14847340 14847158 ID=MsG0280007391.01.T01:three_prime_utr;Parent=MsG0280007391.01.T01
Gene Sequence

>MsG0280007391.01.T01

ATGGACAAAGCATGGGGTCTAGCTCTTGATACTTCTTCATCTTCTCCAATTCCAATATCTCACTCTCACCCTTTTTTACCTTCAAAACAGCCATCATCTACTTATACCAACGATAGAATGTTTCCTATTTTAGGATTTCCTGTCAACCTTACCCGTAACACCAACGGCGAAGACGGCGGTGACCGGAAAATAACCGGTGAAGTCGATTTCTTTTCTGAAAGAAACAAACCATCACCTTCAAATGAACACAACCAACATGTTAAATCCAATATCATCAAAAAGGAGATTGTTTCAACCGATGAAAAGCCTTCCACTTCTAATATCCATGTTAATACTGGTTTACAACTTGCAAACACCGGAAGTGATCAATCTGTAGTAGATGATGGAGTTTCATCTGATGCTGAAAATAAACGCGCTAAGACTACTGAGCTTGCACAATTGCAAGTGGAGCTTCAACGGATGAATTCAGAGAACAAAAAGCTGAAAGAGATGCTAAGTCATGTTACCGGTAATTACACGGCTTTGCAGATGCAACTTGTGGCATTAATGCAAAAGAATCACCACACTGAAAATGAGGTTGTTAATGCAAAAACTGAGGAGAAAAACCAAGGTGTTGGTGGAGCAATGGTACCAAGACAATTTCTTGAGATAGGTACTACTAATGGAACAGCAGAAGTTGAAGATCAAGTATCAAATTCATCATCTGATGAAAGAACAAGATCAAACACACCTCAGATGAGGAATAGCAATGGTAAAACTGGTAGGGAAGACAGTCCAGAATCAGAAACACAAGGCTGGGGACCAAACAAGTCTCAGAAAATATTGAACTCTTCCAATGTTGCAGATCAAGCAAATACAGAAGCTACAATGAGAAAAGCTCGTGTCTCGGTTCGTGCTAGATCAGAAGCTTCAATGATAAGTGATGGATGCCAATGGAGGAAATATGGACAAAAAATGGCTAAAGGAAATCCATGTCCTCGAGCATACTATAGATGCACTATGGCAGTCGGTTGTCCAGTTCGCAAACAAGTTCAACGTTGTGCCGAGGACAAAACAATCTTGGTAACAACATATGAAGGAACACATAACCATCCATTACCACCAGCAGCTATGGCAATGGCATCAACAACCTCAGCAGCAGCAAGCATGTTACTATCAGGATCAATGTCAAGTGCAGATGGAATAATGACACCAAATTTATTAGCAAGAGCTATTCTTCCTTGTTCAACAAGCATGGCAACACTTTCAGCTTCAGCACCATTCCCTACTGTTACATTAGATCTCACACAAAATTCAAACCCAAATCCATTACAATTTCAAAGACCTCAACATGCACCATTTCATCAAGTACCTAGTTTCTTTCAAGGACAGAATCAGAATTTTGCACAAGCAGCAGCATCACTTTATAATCAGTCAAAATTTTCTGGTCTTCAATTGTCTCAAGAAGGTGGTTCTTCTCATTTGACCACACAAGCTCCAACCCAACAACAACAGCAGCAGCAGCAACAACAACCTTCTTTAGCTGACTCGGTCAGCGCCGCCACCGCTGCTATCACCGCCGATCCTAATTTCACCGCTGTTCTCGCAGCCGCTATCTCCTCCATTATTGGTGGTGGCCATGCAAACAATAGCAACAACAACAACAACAGCAGCAATAGCAGAAATACAATTAGCAACTTTTCAGGAAACTAA

Protein sequence

>MsG0280007391.01.T01

MDKAWGLALDTSSSSPIPISHSHPFLPSKQPSSTYTNDRMFPILGFPVNLTRNTNGEDGGDRKITGEVDFFSERNKPSPSNEHNQHVKSNIIKKEIVSTDEKPSTSNIHVNTGLQLANTGSDQSVVDDGVSSDAENKRAKTTELAQLQVELQRMNSENKKLKEMLSHVTGNYTALQMQLVALMQKNHHTENEVVNAKTEEKNQGVGGAMVPRQFLEIGTTNGTAEVEDQVSNSSSDERTRSNTPQMRNSNGKTGREDSPESETQGWGPNKSQKILNSSNVADQANTEATMRKARVSVRARSEASMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILVTTYEGTHNHPLPPAAMAMASTTSAAASMLLSGSMSSADGIMTPNLLARAILPCSTSMATLSASAPFPTVTLDLTQNSNPNPLQFQRPQHAPFHQVPSFFQGQNQNFAQAAASLYNQSKFSGLQLSQEGGSSHLTTQAPTQQQQQQQQQQPSLADSVSAATAAITADPNFTAVLAAAISSIIGGGHANNSNNNNNSSNSRNTISNFSGN*