Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021971.01.T01 | XP_003616287.1 | 62.443 | 442 | 159 | 2 | 1 | 436 | 1 | 441 | 0 | 593 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021971.01.T01 | Q65XV7 | 21.053 | 418 | 291 | 15 | 8 | 400 | 310 | 713 | 2.03E-14 | 80.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021971.01.T01 | G7K1P7 | 62.443 | 442 | 159 | 2 | 1 | 436 | 1 | 441 | 0.0 | 593 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047925.01 | MsG0480021971.01 | 0.819388 | 1.192307e-52 | 9.161814e-50 |
| MsG0080048431.01 | MsG0480021971.01 | 0.815541 | 8.771363e-52 | 6.064534e-49 |
| MsG0380014135.01 | MsG0480021971.01 | 0.804054 | 2.596325e-49 | 1.325604e-46 |
| MsG0480021971.01 | MsG0580029554.01 | 0.862144 | 6.240598e-64 | 1.808842e-60 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021971.01.T01 | MTR_5g078250 | 62.443 | 442 | 159 | 2 | 1 | 436 | 1 | 441 | 0.0 | 593 |
| MsG0480021971.01.T01 | MTR_8g062030 | 60.047 | 428 | 171 | 0 | 1 | 428 | 1 | 428 | 0.0 | 555 |
| MsG0480021971.01.T01 | MTR_1g075850 | 47.595 | 582 | 231 | 10 | 1 | 567 | 1 | 523 | 9.83e-179 | 516 |
| MsG0480021971.01.T01 | MTR_4g046077 | 52.030 | 394 | 132 | 7 | 103 | 495 | 1 | 338 | 6.34e-119 | 358 |
| MsG0480021971.01.T01 | MTR_4g036240 | 38.372 | 430 | 259 | 3 | 1 | 428 | 1 | 426 | 5.77e-104 | 325 |
| MsG0480021971.01.T01 | MTR_2g048560 | 35.746 | 456 | 281 | 3 | 1 | 449 | 1 | 451 | 2.10e-101 | 318 |
| MsG0480021971.01.T01 | MTR_6g052340 | 63.158 | 247 | 79 | 4 | 1 | 241 | 1 | 241 | 4.45e-98 | 313 |
| MsG0480021971.01.T01 | MTR_8g479260 | 34.752 | 423 | 274 | 2 | 8 | 428 | 10 | 432 | 1.21e-91 | 293 |
| MsG0480021971.01.T01 | MTR_2g008650 | 34.752 | 423 | 274 | 2 | 8 | 428 | 10 | 432 | 2.36e-91 | 292 |
| MsG0480021971.01.T01 | MTR_3g056270 | 37.871 | 404 | 243 | 4 | 29 | 428 | 186 | 585 | 7.98e-88 | 287 |
| MsG0480021971.01.T01 | MTR_3g056270 | 33.007 | 306 | 180 | 6 | 1 | 306 | 1 | 281 | 3.70e-44 | 167 |
| MsG0480021971.01.T01 | MTR_0042s0170 | 38.429 | 471 | 193 | 11 | 103 | 564 | 1 | 383 | 5.88e-86 | 273 |
| MsG0480021971.01.T01 | MTR_4g036240 | 38.000 | 350 | 211 | 3 | 81 | 428 | 1 | 346 | 1.36e-79 | 259 |
| MsG0480021971.01.T01 | MTR_8g059025 | 70.290 | 138 | 41 | 0 | 1 | 138 | 1 | 138 | 4.98e-68 | 217 |
| MsG0480021971.01.T01 | MTR_4g036240 | 37.631 | 287 | 173 | 3 | 144 | 428 | 1 | 283 | 4.73e-63 | 213 |
| MsG0480021971.01.T01 | MTR_6g051890 | 50.000 | 202 | 100 | 1 | 1 | 201 | 5 | 206 | 4.01e-61 | 207 |
| MsG0480021971.01.T01 | MTR_6g051890 | 39.382 | 259 | 96 | 7 | 240 | 495 | 155 | 355 | 4.04e-43 | 159 |
| MsG0480021971.01.T01 | MTR_3g081610 | 52.660 | 188 | 59 | 3 | 241 | 428 | 10 | 167 | 5.05e-61 | 201 |
| MsG0480021971.01.T01 | MTR_8g062060 | 30.383 | 418 | 282 | 3 | 13 | 428 | 13 | 423 | 5.99e-60 | 208 |
| MsG0480021971.01.T01 | MTR_2g048550 | 29.358 | 436 | 293 | 4 | 1 | 428 | 1 | 429 | 2.96e-59 | 205 |
| MsG0480021971.01.T01 | MTR_8g467450 | 63.309 | 139 | 51 | 0 | 1 | 139 | 1 | 139 | 1.95e-58 | 192 |
| MsG0480021971.01.T01 | MTR_6g445520 | 32.653 | 294 | 191 | 1 | 142 | 428 | 1 | 294 | 3.63e-52 | 184 |
| MsG0480021971.01.T01 | MTR_2g054710 | 36.441 | 236 | 150 | 0 | 8 | 243 | 10 | 245 | 3.29e-51 | 177 |
| MsG0480021971.01.T01 | MTR_8g088810 | 33.444 | 302 | 193 | 1 | 1 | 294 | 1 | 302 | 1.76e-48 | 171 |
| MsG0480021971.01.T01 | MTR_1g094230 | 32.237 | 304 | 186 | 3 | 1 | 297 | 1 | 291 | 2.58e-48 | 171 |
| MsG0480021971.01.T01 | MTR_8g463820 | 33.808 | 281 | 172 | 2 | 1 | 280 | 1 | 268 | 2.73e-48 | 170 |
| MsG0480021971.01.T01 | MTR_6g039240 | 32.450 | 302 | 184 | 3 | 1 | 295 | 1 | 289 | 5.32e-48 | 169 |
| MsG0480021971.01.T01 | MTR_1g105785 | 26.164 | 451 | 312 | 11 | 11 | 456 | 11 | 445 | 1.84e-46 | 172 |
| MsG0480021971.01.T01 | MTR_3g056240 | 38.863 | 211 | 129 | 0 | 1 | 211 | 1 | 211 | 3.03e-46 | 166 |
| MsG0480021971.01.T01 | MTR_7g110100 | 27.230 | 426 | 301 | 9 | 8 | 428 | 8 | 429 | 1.94e-43 | 163 |
| MsG0480021971.01.T01 | MTR_6g069230 | 38.596 | 228 | 134 | 3 | 14 | 239 | 110 | 333 | 1.23e-41 | 154 |
| MsG0480021971.01.T01 | MTR_6g033945 | 41.294 | 201 | 78 | 3 | 132 | 300 | 32 | 224 | 1.15e-40 | 147 |
| MsG0480021971.01.T01 | MTR_4g134870 | 46.711 | 152 | 74 | 1 | 241 | 392 | 117 | 261 | 1.83e-40 | 152 |
| MsG0480021971.01.T01 | MTR_7g089660 | 35.377 | 212 | 124 | 1 | 1 | 212 | 1 | 199 | 4.85e-40 | 146 |
| MsG0480021971.01.T01 | MTR_2g062200 | 44.186 | 172 | 96 | 0 | 44 | 215 | 1 | 172 | 2.79e-39 | 142 |
| MsG0480021971.01.T01 | MTR_1g050500 | 29.144 | 374 | 227 | 8 | 78 | 438 | 2 | 350 | 4.45e-39 | 150 |
| MsG0480021971.01.T01 | MTR_1g036740 | 41.618 | 173 | 100 | 1 | 1 | 173 | 1 | 172 | 3.64e-37 | 136 |
| MsG0480021971.01.T01 | MTR_8g096680 | 41.618 | 173 | 100 | 1 | 1 | 173 | 1 | 172 | 3.64e-37 | 136 |
| MsG0480021971.01.T01 | MTR_4g471610 | 41.040 | 173 | 101 | 1 | 1 | 173 | 1 | 172 | 7.02e-37 | 135 |
| MsG0480021971.01.T01 | MTR_3g078440 | 41.040 | 173 | 101 | 1 | 1 | 173 | 1 | 172 | 7.02e-37 | 135 |
| MsG0480021971.01.T01 | MTR_8g036090 | 41.040 | 173 | 101 | 1 | 1 | 173 | 1 | 172 | 7.02e-37 | 135 |
| MsG0480021971.01.T01 | MTR_1g060700 | 44.253 | 174 | 65 | 1 | 103 | 244 | 1 | 174 | 8.11e-37 | 143 |
| MsG0480021971.01.T01 | MTR_3g095950 | 42.169 | 166 | 95 | 1 | 8 | 173 | 8 | 172 | 9.31e-37 | 135 |
| MsG0480021971.01.T01 | MTR_3g116750 | 42.169 | 166 | 95 | 1 | 8 | 173 | 8 | 172 | 1.59e-36 | 134 |
| MsG0480021971.01.T01 | MTR_7g051400 | 24.823 | 423 | 285 | 10 | 11 | 428 | 11 | 405 | 4.61e-36 | 142 |
| MsG0480021971.01.T01 | MTR_3g044760 | 31.373 | 306 | 195 | 4 | 1 | 302 | 1 | 295 | 1.14e-35 | 139 |
| MsG0480021971.01.T01 | MTR_7g093810 | 41.566 | 166 | 96 | 1 | 8 | 173 | 8 | 172 | 1.38e-35 | 132 |
| MsG0480021971.01.T01 | MTR_4g028320 | 43.421 | 152 | 85 | 1 | 22 | 173 | 3 | 153 | 4.33e-33 | 124 |
| MsG0480021971.01.T01 | MTR_5g085220 | 39.286 | 168 | 102 | 0 | 1 | 168 | 1 | 168 | 4.56e-33 | 125 |
| MsG0480021971.01.T01 | MTR_8g469510 | 62.069 | 87 | 33 | 0 | 20 | 106 | 3 | 89 | 8.58e-33 | 121 |
| MsG0480021971.01.T01 | MTR_6g013455 | 29.893 | 281 | 166 | 4 | 1 | 280 | 1 | 251 | 1.11e-32 | 127 |
| MsG0480021971.01.T01 | MTR_5g055160 | 37.870 | 169 | 105 | 0 | 1 | 169 | 1 | 169 | 3.81e-32 | 125 |
| MsG0480021971.01.T01 | MTR_5g070620 | 68.831 | 77 | 24 | 0 | 2 | 78 | 27 | 103 | 9.19e-32 | 119 |
| MsG0480021971.01.T01 | MTR_3g452170 | 25.959 | 339 | 237 | 9 | 8 | 339 | 8 | 339 | 1.11e-28 | 119 |
| MsG0480021971.01.T01 | MTR_2g032570 | 39.286 | 168 | 99 | 2 | 8 | 173 | 8 | 174 | 4.07e-28 | 111 |
| MsG0480021971.01.T01 | MTR_7g451880 | 26.136 | 264 | 192 | 3 | 8 | 269 | 9 | 271 | 5.51e-27 | 112 |
| MsG0480021971.01.T01 | MTR_8g461360 | 42.446 | 139 | 79 | 1 | 58 | 196 | 1 | 138 | 8.11e-27 | 108 |
| MsG0480021971.01.T01 | MTR_3g084550 | 43.182 | 132 | 74 | 1 | 42 | 173 | 1 | 131 | 9.07e-27 | 105 |
| MsG0480021971.01.T01 | MTR_7g032985 | 63.889 | 72 | 26 | 0 | 100 | 171 | 1 | 72 | 9.80e-27 | 103 |
| MsG0480021971.01.T01 | MTR_1g072220 | 42.424 | 132 | 75 | 1 | 42 | 173 | 1 | 131 | 1.17e-26 | 105 |
| MsG0480021971.01.T01 | MTR_4g016120 | 43.200 | 125 | 70 | 1 | 49 | 173 | 40 | 163 | 1.78e-26 | 106 |
| MsG0480021971.01.T01 | MTR_4g058660 | 25.758 | 264 | 193 | 3 | 8 | 269 | 8 | 270 | 1.79e-26 | 110 |
| MsG0480021971.01.T01 | MTR_6g465570 | 36.306 | 157 | 99 | 1 | 14 | 170 | 10 | 165 | 1.26e-25 | 103 |
| MsG0480021971.01.T01 | MTR_1g011490 | 24.621 | 264 | 187 | 3 | 8 | 269 | 8 | 261 | 1.40e-25 | 107 |
| MsG0480021971.01.T01 | MTR_1g082860 | 27.232 | 224 | 151 | 3 | 8 | 229 | 8 | 221 | 1.82e-25 | 106 |
| MsG0480021971.01.T01 | MTR_7g074180 | 25.000 | 264 | 195 | 3 | 8 | 269 | 8 | 270 | 4.19e-25 | 106 |
| MsG0480021971.01.T01 | MTR_7g104000 | 36.478 | 159 | 95 | 2 | 1 | 159 | 1 | 153 | 1.14e-24 | 103 |
| MsG0480021971.01.T01 | MTR_5g030110 | 24.621 | 264 | 196 | 3 | 8 | 269 | 8 | 270 | 1.78e-24 | 105 |
| MsG0480021971.01.T01 | MTR_2g007410 | 24.621 | 264 | 196 | 3 | 8 | 269 | 8 | 270 | 1.78e-24 | 105 |
| MsG0480021971.01.T01 | MTR_5g056060 | 36.478 | 159 | 95 | 2 | 1 | 159 | 1 | 153 | 2.03e-24 | 102 |
| MsG0480021971.01.T01 | MTR_7g024060 | 24.621 | 264 | 196 | 3 | 8 | 269 | 8 | 270 | 2.17e-24 | 104 |
| MsG0480021971.01.T01 | MTR_6g087820 | 24.621 | 264 | 196 | 3 | 8 | 269 | 8 | 270 | 2.17e-24 | 104 |
| MsG0480021971.01.T01 | MTR_5g081190 | 24.621 | 264 | 196 | 3 | 8 | 269 | 8 | 270 | 2.17e-24 | 104 |
| MsG0480021971.01.T01 | MTR_5g091480 | 24.621 | 264 | 196 | 3 | 8 | 269 | 8 | 270 | 2.17e-24 | 104 |
| MsG0480021971.01.T01 | MTR_5g056290 | 24.621 | 264 | 196 | 3 | 8 | 269 | 8 | 270 | 2.17e-24 | 104 |
| MsG0480021971.01.T01 | MTR_3g031190 | 24.621 | 264 | 196 | 3 | 8 | 269 | 8 | 270 | 2.17e-24 | 104 |
| MsG0480021971.01.T01 | MTR_2g005490 | 24.621 | 264 | 196 | 3 | 8 | 269 | 8 | 270 | 2.17e-24 | 104 |
| MsG0480021971.01.T01 | MTR_2g010570 | 24.621 | 264 | 196 | 3 | 8 | 269 | 8 | 270 | 2.17e-24 | 104 |
| MsG0480021971.01.T01 | MTR_3g015660 | 25.751 | 233 | 170 | 3 | 8 | 238 | 8 | 239 | 2.73e-24 | 102 |
| MsG0480021971.01.T01 | MTR_2g099880 | 43.182 | 132 | 74 | 1 | 42 | 173 | 7 | 137 | 3.29e-24 | 99.0 |
| MsG0480021971.01.T01 | MTR_1g023370 | 26.786 | 224 | 161 | 3 | 8 | 229 | 8 | 230 | 2.13e-23 | 101 |
| MsG0480021971.01.T01 | MTR_2g010270 | 24.806 | 258 | 184 | 4 | 22 | 269 | 3 | 260 | 3.73e-23 | 100 |
| MsG0480021971.01.T01 | MTR_8g446640 | 24.800 | 250 | 185 | 3 | 22 | 269 | 3 | 251 | 4.18e-23 | 100 |
| MsG0480021971.01.T01 | MTR_6g051880 | 28.631 | 241 | 142 | 5 | 70 | 310 | 2 | 212 | 4.92e-23 | 102 |
| MsG0480021971.01.T01 | MTR_4g022520 | 42.276 | 123 | 70 | 1 | 51 | 173 | 11 | 132 | 8.58e-23 | 97.1 |
| MsG0480021971.01.T01 | MTR_1788s0010 | 35.971 | 139 | 89 | 0 | 1 | 139 | 1 | 139 | 2.68e-22 | 93.6 |
| MsG0480021971.01.T01 | MTR_3g055660 | 22.895 | 380 | 268 | 10 | 6 | 371 | 33 | 401 | 4.11e-22 | 100 |
| MsG0480021971.01.T01 | MTR_2g058350 | 37.349 | 166 | 100 | 2 | 8 | 171 | 8 | 171 | 4.51e-22 | 99.0 |
| MsG0480021971.01.T01 | MTR_4g014890 | 22.895 | 380 | 268 | 10 | 6 | 371 | 33 | 401 | 4.73e-22 | 100 |
| MsG0480021971.01.T01 | MTR_4g040040 | 32.394 | 142 | 91 | 2 | 290 | 428 | 3 | 142 | 5.48e-22 | 93.6 |
| MsG0480021971.01.T01 | MTR_5g007120 | 43.636 | 110 | 62 | 0 | 50 | 159 | 19 | 128 | 2.04e-21 | 93.6 |
| MsG0480021971.01.T01 | MTR_5g068430 | 33.766 | 154 | 95 | 1 | 1 | 154 | 1 | 147 | 2.98e-21 | 92.4 |
| MsG0480021971.01.T01 | MTR_7g117425 | 45.946 | 111 | 54 | 1 | 6 | 116 | 6 | 110 | 6.58e-21 | 93.2 |
| MsG0480021971.01.T01 | MTR_4g085760 | 21.739 | 414 | 299 | 12 | 3 | 400 | 9 | 413 | 6.82e-21 | 97.1 |
| MsG0480021971.01.T01 | MTR_2g021620 | 39.231 | 130 | 47 | 1 | 142 | 239 | 156 | 285 | 1.17e-20 | 92.8 |
| MsG0480021971.01.T01 | MTR_6g059860 | 22.005 | 409 | 294 | 10 | 6 | 400 | 27 | 424 | 1.38e-20 | 95.9 |
| MsG0480021971.01.T01 | MTR_5g053590 | 21.769 | 441 | 310 | 13 | 1 | 417 | 1 | 430 | 1.78e-20 | 95.5 |
| MsG0480021971.01.T01 | MTR_8g005940 | 30.114 | 176 | 121 | 2 | 8 | 182 | 8 | 182 | 1.99e-20 | 92.4 |
| MsG0480021971.01.T01 | MTR_6g464080 | 23.601 | 411 | 295 | 12 | 1 | 400 | 1 | 403 | 2.42e-20 | 95.1 |
| MsG0480021971.01.T01 | MTR_2g450060 | 23.798 | 416 | 290 | 13 | 1 | 400 | 5 | 409 | 4.07e-20 | 94.7 |
| MsG0480021971.01.T01 | MTR_4g070090 | 26.133 | 375 | 236 | 14 | 5 | 356 | 23 | 379 | 4.48e-20 | 94.0 |
| MsG0480021971.01.T01 | MTR_0048s0080 | 23.792 | 269 | 186 | 8 | 137 | 401 | 2 | 255 | 1.02e-19 | 91.3 |
| MsG0480021971.01.T01 | MTR_1g052715 | 26.337 | 243 | 172 | 7 | 42 | 280 | 1 | 240 | 3.16e-19 | 89.7 |
| MsG0480021971.01.T01 | MTR_3g037500 | 31.707 | 205 | 118 | 6 | 50 | 242 | 2 | 196 | 3.22e-19 | 89.0 |
| MsG0480021971.01.T01 | MTR_5g032920 | 43.750 | 96 | 54 | 0 | 1 | 96 | 1 | 96 | 3.66e-19 | 83.2 |
| MsG0480021971.01.T01 | MTR_5g004860 | 25.362 | 414 | 286 | 13 | 1 | 400 | 1 | 405 | 3.80e-19 | 91.3 |
| MsG0480021971.01.T01 | MTR_5g084280 | 45.652 | 92 | 47 | 1 | 156 | 247 | 31 | 119 | 7.28e-19 | 83.2 |
| MsG0480021971.01.T01 | MTR_7g045450 | 27.322 | 183 | 131 | 2 | 8 | 189 | 8 | 189 | 2.54e-18 | 85.5 |
| MsG0480021971.01.T01 | MTR_6g073570 | 27.322 | 183 | 131 | 2 | 8 | 189 | 8 | 189 | 2.54e-18 | 85.5 |
| MsG0480021971.01.T01 | MTR_4g071730 | 29.697 | 165 | 102 | 2 | 120 | 283 | 2 | 153 | 2.89e-18 | 82.4 |
| MsG0480021971.01.T01 | MTR_8g078450 | 44.444 | 99 | 54 | 1 | 75 | 173 | 2 | 99 | 7.96e-18 | 81.3 |
| MsG0480021971.01.T01 | MTR_5g045850 | 25.893 | 224 | 141 | 5 | 8 | 229 | 8 | 208 | 1.28e-17 | 84.0 |
| MsG0480021971.01.T01 | MTR_5g019960 | 23.590 | 195 | 146 | 3 | 47 | 239 | 53 | 246 | 1.37e-17 | 83.2 |
| MsG0480021971.01.T01 | MTR_8g465040 | 30.061 | 163 | 113 | 1 | 8 | 170 | 8 | 169 | 3.70e-17 | 79.7 |
| MsG0480021971.01.T01 | MTR_1g051235 | 27.879 | 165 | 109 | 3 | 11 | 170 | 11 | 170 | 4.01e-17 | 79.7 |
| MsG0480021971.01.T01 | MTR_1g091180 | 38.384 | 99 | 61 | 0 | 24 | 122 | 2 | 100 | 1.56e-15 | 73.6 |
| MsG0480021971.01.T01 | MTR_0032s0020 | 27.049 | 244 | 152 | 6 | 268 | 505 | 173 | 396 | 3.65e-15 | 79.0 |
| MsG0480021971.01.T01 | MTR_0032s0020 | 35.135 | 111 | 72 | 0 | 13 | 123 | 13 | 123 | 1.05e-13 | 74.3 |
| MsG0480021971.01.T01 | MTR_3g032190 | 42.857 | 84 | 48 | 0 | 1 | 84 | 1 | 84 | 5.64e-15 | 71.6 |
| MsG0480021971.01.T01 | MTR_5g060920 | 44.304 | 79 | 44 | 0 | 6 | 84 | 8 | 86 | 5.84e-15 | 71.6 |
| MsG0480021971.01.T01 | MTR_4g032585 | 29.268 | 164 | 113 | 3 | 267 | 428 | 11 | 173 | 7.51e-15 | 75.9 |
| MsG0480021971.01.T01 | MTR_4g032565 | 29.268 | 164 | 113 | 3 | 267 | 428 | 11 | 173 | 1.14e-14 | 75.1 |
| MsG0480021971.01.T01 | MTR_5g054640 | 36.364 | 99 | 63 | 0 | 24 | 122 | 2 | 100 | 2.00e-13 | 68.2 |
| MsG0480021971.01.T01 | MTR_2g041270 | 22.715 | 361 | 238 | 14 | 13 | 348 | 189 | 533 | 7.31e-13 | 72.0 |
| MsG0480021971.01.T01 | MTR_1g043690 | 24.316 | 329 | 226 | 12 | 8 | 325 | 15 | 331 | 1.85e-12 | 70.5 |
| MsG0480021971.01.T01 | MTR_1g096860 | 43.056 | 72 | 41 | 0 | 42 | 113 | 1 | 72 | 1.94e-12 | 63.2 |
| MsG0480021971.01.T01 | MTR_3g067530 | 35.878 | 131 | 76 | 4 | 75 | 205 | 2 | 124 | 2.56e-12 | 64.7 |
| MsG0480021971.01.T01 | MTR_2g020010 | 30.128 | 156 | 86 | 3 | 7 | 155 | 45 | 184 | 4.65e-12 | 67.4 |
| MsG0480021971.01.T01 | MTR_1g492690 | 25.610 | 246 | 158 | 6 | 187 | 430 | 1 | 223 | 5.05e-12 | 68.2 |
| MsG0480021971.01.T01 | MTR_1g056650 | 41.667 | 72 | 42 | 0 | 42 | 113 | 1 | 72 | 9.08e-12 | 61.2 |
| MsG0480021971.01.T01 | MTR_5g057125 | 24.229 | 227 | 151 | 5 | 203 | 428 | 1 | 207 | 1.05e-11 | 66.6 |
| MsG0480021971.01.T01 | MTR_5g027390 | 24.062 | 320 | 211 | 12 | 54 | 356 | 43 | 347 | 3.19e-11 | 66.2 |
| MsG0480021971.01.T01 | MTR_7g051840 | 29.134 | 127 | 86 | 1 | 44 | 170 | 1 | 123 | 3.21e-11 | 61.2 |
| MsG0480021971.01.T01 | MTR_6g039230 | 39.437 | 71 | 43 | 0 | 8 | 78 | 8 | 78 | 3.97e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021971.01.T01 | AT1G52950 | 26.133 | 375 | 249 | 9 | 8 | 365 | 10 | 373 | 6.34e-39 | 150 |
| MsG0480021971.01.T01 | AT2G05642 | 23.303 | 442 | 266 | 8 | 19 | 428 | 19 | 419 | 3.30e-29 | 122 |
| MsG0480021971.01.T01 | AT5G08020 | 24.346 | 382 | 264 | 13 | 1 | 365 | 153 | 526 | 1.57e-18 | 89.7 |
| MsG0480021971.01.T01 | AT2G06510 | 22.513 | 382 | 258 | 13 | 8 | 365 | 177 | 544 | 2.87e-15 | 79.3 |
| MsG0480021971.01.T01 | AT2G06510 | 22.513 | 382 | 258 | 13 | 8 | 365 | 200 | 567 | 3.14e-15 | 79.3 |
| MsG0480021971.01.T01 | AT4G19130 | 22.193 | 383 | 262 | 13 | 11 | 371 | 235 | 603 | 5.69e-15 | 79.0 |
| MsG0480021971.01.T01 | AT4G19130 | 22.193 | 383 | 262 | 13 | 11 | 371 | 234 | 602 | 5.74e-15 | 79.0 |
| MsG0480021971.01.T01 | AT5G45400 | 23.274 | 391 | 259 | 15 | 5 | 371 | 299 | 672 | 1.07e-11 | 68.6 |
Find 172 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTCTCCCTCTGGGTTTA+TGG | 0.163374 | 4:-66596164 | MsG0480021971.01.T01:three_prime_UTR |
| TTATAAACACAACTAGAATT+TGG | 0.165230 | 4:-66598591 | MsG0480021971.01.T01:CDS |
| CACCGCTGATTATGATTATT+TGG | 0.171120 | 4:-66599111 | MsG0480021971.01.T01:CDS |
| ATTTGAAATATCAGCTTATA+TGG | 0.194564 | 4:+66599218 | None:intergenic |
| GGGAAGGATGATGTTGTTTA+AGG | 0.226381 | 4:-66597794 | MsG0480021971.01.T01:CDS |
| AACTCAATCAAGATCAAGTT+TGG | 0.256910 | 4:+66596424 | None:intergenic |
| TAGTTGTGTTTATAACATTC+TGG | 0.271588 | 4:+66598599 | None:intergenic |
| GGGTTTATGGGAGTTTATTA+TGG | 0.280818 | 4:-66596151 | MsG0480021971.01.T01:three_prime_UTR |
| ATTACAAAGCATAAAGTCTA+AGG | 0.283911 | 4:+66596240 | None:intergenic |
| AATTCTCCCTCTGGGTTTAT+GGG | 0.284586 | 4:-66596163 | MsG0480021971.01.T01:three_prime_UTR |
| CAGCTCCACCCATCATCTTC+TGG | 0.291938 | 4:+66598777 | None:intergenic |
| CATTTCCTAAATTCTCCCTC+TGG | 0.306752 | 4:-66596172 | MsG0480021971.01.T01:three_prime_UTR |
| CTGCCGAGAGAGAGTATGTT+AGG | 0.308778 | 4:-66598978 | MsG0480021971.01.T01:CDS |
| TAAACCCAGAGGGAGAATTT+AGG | 0.315682 | 4:+66596167 | None:intergenic |
| TGGATGTGATGCCTTAAGTT+TGG | 0.330388 | 4:-66596600 | MsG0480021971.01.T01:CDS |
| GGATGTGATGCCTTAAGTTT+GGG | 0.342991 | 4:-66596599 | MsG0480021971.01.T01:CDS |
| CAGTAATATGCACCAGAATC+AGG | 0.344639 | 4:+66598199 | None:intergenic |
| CGGTGTGGGCGCAAACTTCT+TGG | 0.348141 | 4:+66599129 | None:intergenic |
| TTTCAGAAGAAATTGGTAGA+AGG | 0.353384 | 4:-66599308 | MsG0480021971.01.T01:CDS |
| AGGAGTGTTACTCCTGATTC+TGG | 0.380403 | 4:-66598211 | MsG0480021971.01.T01:CDS |
| GCAGTGTTTGTGATGTTTGA+TGG | 0.381812 | 4:-66598018 | MsG0480021971.01.T01:CDS |
| TATAAACACAACTAGAATTT+GGG | 0.389875 | 4:-66598590 | MsG0480021971.01.T01:CDS |
| AGCCTGATCAGGTTTCAAAA+AGG | 0.390572 | 4:+66599496 | None:intergenic |
| TACTTCTGTGTAGATGTTGT+TGG | 0.391056 | 4:-66599018 | MsG0480021971.01.T01:intron |
| GATGTTGTTGGTTTGATGAC+TGG | 0.398535 | 4:-66599006 | MsG0480021971.01.T01:CDS |
| AAGGTTGAGTGTGCGTTGTT+TGG | 0.400585 | 4:-66598818 | MsG0480021971.01.T01:CDS |
| TCTGGTGTCGTTCCTTCGCT+TGG | 0.401409 | 4:-66598400 | MsG0480021971.01.T01:CDS |
| GGAAGGTTTGGTTGAGGGAG+AGG | 0.401689 | 4:-66598263 | MsG0480021971.01.T01:CDS |
| CAGATCATGGCTATGGATCC+TGG | 0.402165 | 4:-66596620 | MsG0480021971.01.T01:CDS |
| GCTGCAGCTCCCGACAGGTC+TGG | 0.402644 | 4:+66596551 | None:intergenic |
| CAGAAGATGATGGGTGGAGC+TGG | 0.405806 | 4:-66598776 | MsG0480021971.01.T01:CDS |
| CAGAGGGAGAATTTAGGAAA+TGG | 0.409900 | 4:+66596173 | None:intergenic |
| CAAAATGATACCTCAAGAAC+TGG | 0.410752 | 4:+66596770 | None:intergenic |
| ATCCATGGCATTGAACCTTC+TGG | 0.412452 | 4:-66598418 | MsG0480021971.01.T01:CDS |
| CTTCGCTTGGTCCTCGCGTT+AGG | 0.417322 | 4:-66598387 | MsG0480021971.01.T01:CDS |
| AGCTATGTGTTGTAGGTATA+AGG | 0.419547 | 4:-66598073 | MsG0480021971.01.T01:intron |
| TGGTTGAGGGAGAGGATTGG+TGG | 0.420911 | 4:-66598255 | MsG0480021971.01.T01:CDS |
| TCCTGAGATTGTTAGTTTGA+AGG | 0.424223 | 4:-66597815 | MsG0480021971.01.T01:CDS |
| TTGTGCTGTTGTGGAAGGTT+TGG | 0.424474 | 4:-66598275 | MsG0480021971.01.T01:CDS |
| AATATAACCTTGGAACCATA+TGG | 0.425673 | 4:+66598152 | None:intergenic |
| CGTTGATACATCTATTATTG+AGG | 0.429613 | 4:-66597710 | MsG0480021971.01.T01:CDS |
| TCAACAGAGTTAGCCTGATC+AGG | 0.429762 | 4:+66599485 | None:intergenic |
| CGCAAGGCATTTGACGCAGT+TGG | 0.430086 | 4:-66596485 | MsG0480021971.01.T01:CDS |
| GGGTGATGAGGTTAGTGATT+TGG | 0.435369 | 4:-66597565 | MsG0480021971.01.T01:CDS |
| TGGTGTTTCATTCAGTGGTA+AGG | 0.437379 | 4:-66598837 | MsG0480021971.01.T01:intron |
| CAGAAGAAATTGGTAGAAGG+AGG | 0.441031 | 4:-66599305 | MsG0480021971.01.T01:CDS |
| TGTTTGAGTGATATTGTTCC+TGG | 0.441733 | 4:-66599572 | MsG0480021971.01.T01:CDS |
| CCCTTCAAACTAACAATCTC+AGG | 0.442351 | 4:+66597814 | None:intergenic |
| GTTGTGGAAGGTTTGGTTGA+GGG | 0.444068 | 4:-66598268 | MsG0480021971.01.T01:CDS |
| ATTTCCTAAATTCTCCCTCT+GGG | 0.450704 | 4:-66596171 | MsG0480021971.01.T01:three_prime_UTR |
| AATTTCACAGCTTCTTCAAA+AGG | 0.450821 | 4:+66598559 | None:intergenic |
| GTCGAGAAGACTGCATCTGC+AGG | 0.453268 | 4:-66597772 | MsG0480021971.01.T01:CDS |
| GGTCATGTGTCTGAGACATC+TGG | 0.453841 | 4:-66596809 | MsG0480021971.01.T01:CDS |
| TGGAGCTGGGGAAGGACTGC+CGG | 0.454224 | 4:-66598762 | MsG0480021971.01.T01:CDS |
| ATACAGCAACTGCCTTCTAA+TGG | 0.454231 | 4:+66599334 | None:intergenic |
| TGCCTTGCGCAAATTCCTCT+TGG | 0.456752 | 4:+66596499 | None:intergenic |
| AGATTCATGCCACCATTAGA+AGG | 0.458064 | 4:-66599346 | MsG0480021971.01.T01:CDS |
| GCAAACTGAACGACAACAAC+CGG | 0.460581 | 4:+66598743 | None:intergenic |
| AGAGTATGTTAGGGATGGAA+AGG | 0.460759 | 4:-66598968 | MsG0480021971.01.T01:CDS |
| AATATCACTCAAACAATCAA+TGG | 0.461288 | 4:+66599580 | None:intergenic |
| TCTGCAGGGGTCATGTTTGA+TGG | 0.461394 | 4:-66597757 | MsG0480021971.01.T01:CDS |
| GGATGCTGAGTTGAGTGAAC+TGG | 0.464020 | 4:-66596903 | MsG0480021971.01.T01:CDS |
| CCGCAGCTGCAGCTCCCGAC+AGG | 0.464499 | 4:+66596546 | None:intergenic |
| ATGTTGTTGGTTTGATGACT+GGG | 0.464793 | 4:-66599005 | MsG0480021971.01.T01:CDS |
| GGTGGTCTATTGTGTTGTGT+TGG | 0.465357 | 4:-66596269 | MsG0480021971.01.T01:three_prime_UTR |
| AAGCTGTGAAATTTAGAGAA+GGG | 0.466500 | 4:-66598549 | MsG0480021971.01.T01:intron |
| TGATGAGGTTAGTGATTTGG+TGG | 0.466829 | 4:-66597562 | MsG0480021971.01.T01:CDS |
| CCCTTTCAGGCTGAAAATTG+TGG | 0.469848 | 4:-66597847 | MsG0480021971.01.T01:intron |
| CCTGAGATTGTTAGTTTGAA+GGG | 0.471203 | 4:-66597814 | MsG0480021971.01.T01:CDS |
| GATGTTGTTGTTACTCCAGC+TGG | 0.471699 | 4:-66596830 | MsG0480021971.01.T01:CDS |
| GGATGGAAAGGTTACTAAGA+TGG | 0.473621 | 4:-66598956 | MsG0480021971.01.T01:CDS |
| TCATACTTTGCAGTTGCCCC+TGG | 0.477173 | 4:-66599269 | MsG0480021971.01.T01:CDS |
| ACTCAATCAAGATCAAGTTT+GGG | 0.477235 | 4:+66596425 | None:intergenic |
| GTTGTTTGTGCTGTTGTGGA+AGG | 0.485440 | 4:-66598280 | MsG0480021971.01.T01:CDS |
| AACATAGATAATGATACAAT+AGG | 0.486386 | 4:+66596085 | None:intergenic |
| TTATGTTGTTTGTGCTGTTG+TGG | 0.491017 | 4:-66598284 | MsG0480021971.01.T01:CDS |
| GGATCAAGGTGCGTGTGCTT+AGG | 0.496137 | 4:-66599535 | MsG0480021971.01.T01:CDS |
| ATTAGAGAAAATCCATGCAC+AGG | 0.499151 | 4:+66599158 | None:intergenic |
| TTTGCAGTTGCCCCTGGTGT+TGG | 0.499276 | 4:-66599263 | MsG0480021971.01.T01:CDS |
| AGAAGATGATGGGTGGAGCT+GGG | 0.503992 | 4:-66598775 | MsG0480021971.01.T01:CDS |
| GCTGATTATGATTATTTGGT+TGG | 0.504058 | 4:-66599107 | MsG0480021971.01.T01:intron |
| CAACTTAGTTTCTGCAGCCA+AGG | 0.505104 | 4:-66597962 | MsG0480021971.01.T01:intron |
| GTCTCAGACACATGACCAGC+TGG | 0.510107 | 4:+66596815 | None:intergenic |
| CCTGTCGGGAGCTGCAGCTG+CGG | 0.512216 | 4:-66596546 | MsG0480021971.01.T01:CDS |
| GTTTGGTTGAGGGAGAGGAT+TGG | 0.513138 | 4:-66598258 | MsG0480021971.01.T01:CDS |
| ATCCTGCATGTCGTTGTCAT+AGG | 0.517357 | 4:-66598231 | MsG0480021971.01.T01:CDS |
| TGTGTCTCCTCAACAACCTC+AGG | 0.517827 | 4:+66596872 | None:intergenic |
| CTCTGATGTTGTGGGTGATG+AGG | 0.518203 | 4:-66597577 | MsG0480021971.01.T01:CDS |
| TGTTGTGGAAGGTTTGGTTG+AGG | 0.521717 | 4:-66598269 | MsG0480021971.01.T01:CDS |
| GTACGGTATGCGCCAACACC+AGG | 0.522121 | 4:+66599251 | None:intergenic |
| CGTTAGGCCTTCGATTGAAG+AGG | 0.523592 | 4:-66598371 | MsG0480021971.01.T01:CDS |
| AATATCAGTGTTGCAATCCA+TGG | 0.525062 | 4:-66598433 | MsG0480021971.01.T01:intron |
| CACCAGAAGGTTCAATGCCA+TGG | 0.526115 | 4:+66598416 | None:intergenic |
| GAAGCTGTGAAATTTAGAGA+AGG | 0.526781 | 4:-66598550 | MsG0480021971.01.T01:CDS |
| ATCCTCCATGACTCTCTACC+AGG | 0.529476 | 4:+66599554 | None:intergenic |
| AGATTGTTAGTTTGAAGGGA+AGG | 0.530656 | 4:-66597810 | MsG0480021971.01.T01:CDS |
| TTCACAGCTTCTTCAAAAGG+AGG | 0.531307 | 4:+66598562 | None:intergenic |
| AAACTTAAGGCATCACATCC+AGG | 0.531694 | 4:+66596602 | None:intergenic |
| ATGATGGGTGGAGCTGGGGA+AGG | 0.531859 | 4:-66598770 | MsG0480021971.01.T01:CDS |
| TGAGGTTAGTGATTTGGTGG+AGG | 0.534333 | 4:-66597559 | MsG0480021971.01.T01:CDS |
| TGTGAAGCATGTGTTCCATA+TGG | 0.535840 | 4:-66598167 | MsG0480021971.01.T01:CDS |
| TTTGCAGCAGATCATGGCTA+TGG | 0.540325 | 4:-66596627 | MsG0480021971.01.T01:intron |
| TTGAATGCCATTGTGGAGGA+TGG | 0.542450 | 4:-66598310 | MsG0480021971.01.T01:CDS |
| CTTTAAAAGTCCAGACCTGT+CGG | 0.544066 | 4:-66596561 | MsG0480021971.01.T01:CDS |
| ATCCCTAACATACTCTCTCT+CGG | 0.548487 | 4:+66598975 | None:intergenic |
| TAGAGAGTCATGGAGGATCA+AGG | 0.553834 | 4:-66599549 | MsG0480021971.01.T01:CDS |
| TTTAAAAGTCCAGACCTGTC+GGG | 0.554972 | 4:-66596560 | MsG0480021971.01.T01:CDS |
| TTCTGGTGCATATTACTGCA+AGG | 0.555168 | 4:-66598194 | MsG0480021971.01.T01:CDS |
| TCAGGCTAACTCTGTTGAGA+TGG | 0.555939 | 4:-66599480 | MsG0480021971.01.T01:CDS |
| AGTTCACTTATCCCTGTGCA+TGG | 0.556543 | 4:-66599170 | MsG0480021971.01.T01:CDS |
| TGCCGAGAGAGAGTATGTTA+GGG | 0.556551 | 4:-66598977 | MsG0480021971.01.T01:CDS |
| GCGAAAATTAAAATATTCCG+AGG | 0.559220 | 4:-66598722 | MsG0480021971.01.T01:intron |
| GGAATTCTGCACTTCTGTCA+AGG | 0.559554 | 4:-66597689 | MsG0480021971.01.T01:intron |
| GCAGTTTGTGTCTGATGATG+TGG | 0.561495 | 4:-66596924 | MsG0480021971.01.T01:intron |
| TGATTCTCTCCAGAAGATGA+TGG | 0.571497 | 4:-66598786 | MsG0480021971.01.T01:CDS |
| CTCCTATGACAACGACATGC+AGG | 0.572521 | 4:+66598229 | None:intergenic |
| ATGTGTTCCATATGGTTCCA+AGG | 0.573536 | 4:-66598159 | MsG0480021971.01.T01:intron |
| AAGAAATCCTCTTCAATCGA+AGG | 0.574744 | 4:+66598364 | None:intergenic |
| TGTTGAGGAGACACAAGTTG+AGG | 0.581077 | 4:-66596864 | MsG0480021971.01.T01:CDS |
| AAATGCTGCTCCAGTTCTTG+AGG | 0.581445 | 4:-66596780 | MsG0480021971.01.T01:intron |
| AATGAAGACAAAGGTGGAGA+GGG | 0.584507 | 4:-66599198 | MsG0480021971.01.T01:CDS |
| GAGAGAGAGTATGTTAGGGA+TGG | 0.585755 | 4:-66598973 | MsG0480021971.01.T01:CDS |
| GGTGACATGCAACTGTTGCT+TGG | 0.586225 | 4:-66597997 | MsG0480021971.01.T01:CDS |
| TTGTTCCTGGTAGAGAGTCA+TGG | 0.586636 | 4:-66599559 | MsG0480021971.01.T01:CDS |
| ATAATCATAATCAGCGGTGT+GGG | 0.589439 | 4:+66599115 | None:intergenic |
| TTACAAAGCATAAAGTCTAA+GGG | 0.592008 | 4:+66596241 | None:intergenic |
| TGAATGCCATTGTGGAGGAT+GGG | 0.592525 | 4:-66598309 | MsG0480021971.01.T01:CDS |
| GGTGCGTGTGCTTAGGATGT+GGG | 0.592953 | 4:-66599528 | MsG0480021971.01.T01:CDS |
| TAGATAATGATACAATAGGT+AGG | 0.594219 | 4:+66596089 | None:intergenic |
| TCGAGAAGACTGCATCTGCA+GGG | 0.595551 | 4:-66597771 | MsG0480021971.01.T01:CDS |
| TCGAGGTCTATTATGTTGTG+TGG | 0.595636 | 4:-66596290 | MsG0480021971.01.T01:three_prime_UTR |
| AGGTGCGTGTGCTTAGGATG+TGG | 0.597101 | 4:-66599529 | MsG0480021971.01.T01:CDS |
| GAAGATGATGGGTGGAGCTG+GGG | 0.597525 | 4:-66598774 | MsG0480021971.01.T01:CDS |
| AGCGAAGGAACGACACCAGA+AGG | 0.598235 | 4:+66598403 | None:intergenic |
| GATGCTGAGTTGAGTGAACT+GGG | 0.599165 | 4:-66596902 | MsG0480021971.01.T01:CDS |
| TATATGGATGAATCGTAGTA+CGG | 0.602331 | 4:+66599234 | None:intergenic |
| ATTTAGGAAATGGAACATAG+AGG | 0.605079 | 4:+66596183 | None:intergenic |
| AAATGAAGACAAAGGTGGAG+AGG | 0.612097 | 4:-66599199 | MsG0480021971.01.T01:CDS |
| AGCCAAGAGGAATTTGCGCA+AGG | 0.614074 | 4:-66596501 | MsG0480021971.01.T01:CDS |
| CAGCAACTGCCTTCTAATGG+TGG | 0.615304 | 4:+66599337 | None:intergenic |
| TCTGGTGCATATTACTGCAA+GGG | 0.615518 | 4:-66598193 | MsG0480021971.01.T01:CDS |
| TGAGTTGAGTGAACTGGGTG+AGG | 0.621122 | 4:-66596897 | MsG0480021971.01.T01:CDS |
| TGAGGATCCTGAGGTTGTTG+AGG | 0.621531 | 4:-66596879 | MsG0480021971.01.T01:CDS |
| AATAATCATAATCAGCGGTG+TGG | 0.624084 | 4:+66599114 | None:intergenic |
| TACGGTATGCGCCAACACCA+GGG | 0.625010 | 4:+66599252 | None:intergenic |
| CGAGAAGACTGCATCTGCAG+GGG | 0.629581 | 4:-66597770 | MsG0480021971.01.T01:CDS |
| ATTTCAAATGAAGACAAAGG+TGG | 0.632682 | 4:-66599204 | MsG0480021971.01.T01:CDS |
| GATTCTCTCCAGAAGATGAT+GGG | 0.633510 | 4:-66598785 | MsG0480021971.01.T01:CDS |
| GATATTTCAAATGAAGACAA+AGG | 0.634663 | 4:-66599207 | MsG0480021971.01.T01:CDS |
| CTAACGCGAGGACCAAGCGA+AGG | 0.636906 | 4:+66598388 | None:intergenic |
| GCACTGATGTTACCTAGCTG+TGG | 0.638088 | 4:-66596129 | MsG0480021971.01.T01:three_prime_UTR |
| CTATGAGTTGAATGCCATTG+TGG | 0.639853 | 4:-66598317 | MsG0480021971.01.T01:CDS |
| AACACTAAAAGTCCACAGCT+AGG | 0.643321 | 4:+66596117 | None:intergenic |
| TGCTGAAGAGACACAGCCCA+AGG | 0.644959 | 4:-66597526 | MsG0480021971.01.T01:intron |
| TTAGAGAAAATCCATGCACA+GGG | 0.648394 | 4:+66599159 | None:intergenic |
| AGGTCTATTATGTTGTGTGG+TGG | 0.648522 | 4:-66596287 | MsG0480021971.01.T01:three_prime_UTR |
| ATAAACTCCCATAAACCCAG+AGG | 0.656369 | 4:+66596156 | None:intergenic |
| ATGTGATGCCTTAAGTTTGG+GGG | 0.656522 | 4:-66596597 | MsG0480021971.01.T01:CDS |
| TCTCTCCAGAAGATGATGGG+TGG | 0.657237 | 4:-66598782 | MsG0480021971.01.T01:CDS |
| AACCAAATAATCATAATCAG+CGG | 0.658464 | 4:+66599109 | None:intergenic |
| TAAACTCCCATAAACCCAGA+GGG | 0.659995 | 4:+66596157 | None:intergenic |
| TTCAAACTAACAATCTCAGG+AGG | 0.664295 | 4:+66597817 | None:intergenic |
| TGAACTGGGTGAGGATCCTG+AGG | 0.671957 | 4:-66596888 | MsG0480021971.01.T01:CDS |
| ATAAATCCCATCCTCCACAA+TGG | 0.672201 | 4:+66598303 | None:intergenic |
| ACGGTATGCGCCAACACCAG+GGG | 0.680764 | 4:+66599253 | None:intergenic |
| TCAATCGAAGGCCTAACGCG+AGG | 0.683506 | 4:+66598376 | None:intergenic |
| GATGTGATGCCTTAAGTTTG+GGG | 0.693755 | 4:-66596598 | MsG0480021971.01.T01:CDS |
| TACTACCAGCAAGAAAACGA+AGG | 0.697185 | 4:-66596450 | MsG0480021971.01.T01:CDS |
| TGGCTGTCAACAAAGCCAAG+AGG | 0.709700 | 4:-66596514 | MsG0480021971.01.T01:CDS |
| GCGTGTGCTTAGGATGTGGG+AGG | 0.715566 | 4:-66599525 | MsG0480021971.01.T01:CDS |
| TGAGTTGAATGCCATTGTGG+AGG | 0.719334 | 4:-66598314 | MsG0480021971.01.T01:CDS |
| TTCCTGGTAGAGAGTCATGG+AGG | 0.748573 | 4:-66599556 | MsG0480021971.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAATATATATTTTTTAGAAA+AGG | + | Chr4:66598626-66598645 | None:intergenic | 10.0% |
| !! | CTTTGTAAAATACTTAATTT+GGG | + | Chr4:66598515-66598534 | None:intergenic | 15.0% |
| !! | GGGTTTATATAAATTTAAAT+AGG | - | Chr4:66598924-66598943 | MsG0480021971.01.T01:intron | 15.0% |
| !! | TATTTATTTATTCTCATTAG+TGG | + | Chr4:66598591-66598610 | None:intergenic | 15.0% |
| !! | TCTTTGTAAAATACTTAATT+TGG | + | Chr4:66598516-66598535 | None:intergenic | 15.0% |
| !!! | TATCATTCAATTATTTTGTA+TGG | - | Chr4:66597541-66597560 | MsG0480021971.01.T01:CDS | 15.0% |
| !!! | TATTATTTGTTTTGTATATC+AGG | - | Chr4:66596221-66596240 | MsG0480021971.01.T01:three_prime_UTR | 15.0% |
| !!! | TTTGTAAAATACTTAATTTG+GGG | + | Chr4:66598514-66598533 | None:intergenic | 15.0% |
| !! | AACATAGATAATGATACAAT+AGG | + | Chr4:66599572-66599591 | None:intergenic | 20.0% |
| !! | AAGTTGACATATTATATTAG+TGG | - | Chr4:66598947-66598966 | MsG0480021971.01.T01:CDS | 20.0% |
| !! | TATAAACACAACTAGAATTT+GGG | - | Chr4:66597064-66597083 | MsG0480021971.01.T01:intron | 20.0% |
| !! | TTATAAACACAACTAGAATT+TGG | - | Chr4:66597063-66597082 | MsG0480021971.01.T01:intron | 20.0% |
| !! | TTGAAAATAAACACTAAAAC+CGG | + | Chr4:66597763-66597782 | None:intergenic | 20.0% |
| !! | TTGAGAAAAAAATATTGGTA+AGG | - | Chr4:66598551-66598570 | MsG0480021971.01.T01:CDS | 20.0% |
| !!! | AAATAATTGAATGATAGTGA+TGG | + | Chr4:66597537-66597556 | None:intergenic | 20.0% |
| !!! | AAATTATATTAACCCTGTTT+TGG | - | Chr4:66596797-66596816 | MsG0480021971.01.T01:CDS | 20.0% |
| !!! | AACTCATAGATATTTTTCTT+GGG | + | Chr4:66597326-66597345 | None:intergenic | 20.0% |
| !!! | AATAATTGAATGATAGTGAT+GGG | + | Chr4:66597536-66597555 | None:intergenic | 20.0% |
| !!! | AATTGTTATGTTTTGATGTA+TGG | - | Chr4:66598021-66598040 | MsG0480021971.01.T01:CDS | 20.0% |
| !!! | ATTTGAAATATCAGCTTATA+TGG | + | Chr4:66596439-66596458 | None:intergenic | 20.0% |
| !!! | TCATTTTGCTTTTATAACTT+TGG | - | Chr4:66598899-66598918 | MsG0480021971.01.T01:intron | 20.0% |
| ! | AACCAAATAATCATAATCAG+CGG | + | Chr4:66596548-66596567 | None:intergenic | 25.0% |
| ! | AATATCACTCAAACAATCAA+TGG | + | Chr4:66596077-66596096 | None:intergenic | 25.0% |
| ! | ATGTCTAGAAAAATATTTCG+AGG | - | Chr4:66599347-66599366 | MsG0480021971.01.T01:CDS | 25.0% |
| ! | ATTACAAAGCATAAAGTCTA+AGG | + | Chr4:66599417-66599436 | None:intergenic | 25.0% |
| ! | ATTAGCGGAAAATTTATGTT+AGG | - | Chr4:66598167-66598186 | MsG0480021971.01.T01:CDS | 25.0% |
| ! | ATTCCGAGGTATAAATTAAT+GGG | - | Chr4:66596946-66596965 | MsG0480021971.01.T01:intron | 25.0% |
| ! | CAAAAGAGTGAAACATTTAA+TGG | - | Chr4:66598276-66598295 | MsG0480021971.01.T01:CDS | 25.0% |
| ! | GATATTTCAAATGAAGACAA+AGG | - | Chr4:66596447-66596466 | MsG0480021971.01.T01:CDS | 25.0% |
| ! | GGTTTAATCTAATATAACCT+TGG | + | Chr4:66597515-66597534 | None:intergenic | 25.0% |
| ! | GTGTATACTTATTCTATTAG+CGG | - | Chr4:66598152-66598171 | MsG0480021971.01.T01:intron | 25.0% |
| ! | TAGATAATGATACAATAGGT+AGG | + | Chr4:66599568-66599587 | None:intergenic | 25.0% |
| ! | TAGTTGTGTTTATAACATTC+TGG | + | Chr4:66597058-66597077 | None:intergenic | 25.0% |
| ! | TATTCCGAGGTATAAATTAA+TGG | - | Chr4:66596945-66596964 | MsG0480021971.01.T01:intron | 25.0% |
| ! | TTACAAAGCATAAAGTCTAA+GGG | + | Chr4:66599416-66599435 | None:intergenic | 25.0% |
| ! | TTACCCATTAATTTATACCT+CGG | + | Chr4:66596952-66596971 | None:intergenic | 25.0% |
| ! | TTTGATGTAGTTACTATGTT+GGG | - | Chr4:66596584-66596603 | MsG0480021971.01.T01:CDS | 25.0% |
| !! | ACTCATAGATATTTTTCTTG+GGG | + | Chr4:66597325-66597344 | None:intergenic | 25.0% |
| !! | CAACTCATAGATATTTTTCT+TGG | + | Chr4:66597327-66597346 | None:intergenic | 25.0% |
| !! | CAGCATTGAGAAAAAAATAT+TGG | - | Chr4:66598546-66598565 | MsG0480021971.01.T01:intron | 25.0% |
| !! | TCGAAATATTTTTCTAGACA+TGG | + | Chr4:66599348-66599367 | None:intergenic | 25.0% |
| !!! | GTATGTTTTTCAGAAGAAAT+TGG | - | Chr4:66596339-66596358 | MsG0480021971.01.T01:intron | 25.0% |
| !!! | TTGCTTTTATAACTTTGGTT+GGG | - | Chr4:66598904-66598923 | MsG0480021971.01.T01:intron | 25.0% |
| !!! | TTTGCTTTTATAACTTTGGT+TGG | - | Chr4:66598903-66598922 | MsG0480021971.01.T01:intron | 25.0% |
| AACAATTAAGTTCTACAGAG+AGG | + | Chr4:66598992-66599011 | None:intergenic | 30.0% | |
| AACTCAATCAAGATCAAGTT+TGG | + | Chr4:66599233-66599252 | None:intergenic | 30.0% | |
| AAGCTGTGAAATTTAGAGAA+GGG | - | Chr4:66597105-66597124 | MsG0480021971.01.T01:intron | 30.0% | |
| AATATAACCTTGGAACCATA+TGG | + | Chr4:66597505-66597524 | None:intergenic | 30.0% | |
| AATCTCCAAGTTATTGTAAG+TGG | + | Chr4:66598209-66598228 | None:intergenic | 30.0% | |
| AATTTCACAGCTTCTTCAAA+AGG | + | Chr4:66597098-66597117 | None:intergenic | 30.0% | |
| ACTCAATCAAGATCAAGTTT+GGG | + | Chr4:66599232-66599251 | None:intergenic | 30.0% | |
| AGAATAAGTATACACACCTT+GGG | + | Chr4:66598147-66598166 | None:intergenic | 30.0% | |
| AGAGAAAAACTACAAATGGA+TGG | + | Chr4:66598061-66598080 | None:intergenic | 30.0% | |
| ATTTAGGAAATGGAACATAG+AGG | + | Chr4:66599474-66599493 | None:intergenic | 30.0% | |
| ATTTCAAATGAAGACAAAGG+TGG | - | Chr4:66596450-66596469 | MsG0480021971.01.T01:CDS | 30.0% | |
| CATCAGAGAAAAACTACAAA+TGG | + | Chr4:66598065-66598084 | None:intergenic | 30.0% | |
| CGTTGATACATCTATTATTG+AGG | - | Chr4:66597944-66597963 | MsG0480021971.01.T01:intron | 30.0% | |
| GATACTTTGGTCACTTAAAA+TGG | + | Chr4:66598677-66598696 | None:intergenic | 30.0% | |
| GATTGAGTTCAATGTGATAA+AGG | - | Chr4:66599244-66599263 | MsG0480021971.01.T01:CDS | 30.0% | |
| GCGAAAATTAAAATATTCCG+AGG | - | Chr4:66596932-66596951 | MsG0480021971.01.T01:intron | 30.0% | |
| GCTGATTATGATTATTTGGT+TGG | - | Chr4:66596547-66596566 | MsG0480021971.01.T01:CDS | 30.0% | |
| GTTGCATTAACTAATTGTGT+GGG | - | Chr4:66598482-66598501 | MsG0480021971.01.T01:intron | 30.0% | |
| GTTTGATGTAGTTACTATGT+TGG | - | Chr4:66596583-66596602 | MsG0480021971.01.T01:CDS | 30.0% | |
| TAGAATAAGTATACACACCT+TGG | + | Chr4:66598148-66598167 | None:intergenic | 30.0% | |
| TATATGGATGAATCGTAGTA+CGG | + | Chr4:66596423-66596442 | None:intergenic | 30.0% | |
| TATCTGTTTATATGCAGAGA+GGG | - | Chr4:66597025-66597044 | MsG0480021971.01.T01:intron | 30.0% | |
| TGTTGCATTAACTAATTGTG+TGG | - | Chr4:66598481-66598500 | MsG0480021971.01.T01:intron | 30.0% | |
| TTAGTCCACTTACAATAACT+TGG | - | Chr4:66598201-66598220 | MsG0480021971.01.T01:CDS | 30.0% | |
| TTATCTGTTTATATGCAGAG+AGG | - | Chr4:66597024-66597043 | MsG0480021971.01.T01:intron | 30.0% | |
| TTATTGTAGCTATGTGTTGT+AGG | - | Chr4:66597574-66597593 | MsG0480021971.01.T01:CDS | 30.0% | |
| TTGTCAGCAAATAAAACCAA+TGG | + | Chr4:66598457-66598476 | None:intergenic | 30.0% | |
| TTTATATTTGCAGCAGATCA+TGG | - | Chr4:66599021-66599040 | MsG0480021971.01.T01:intron | 30.0% | |
| TTTCAGAAGAAATTGGTAGA+AGG | - | Chr4:66596346-66596365 | MsG0480021971.01.T01:intron | 30.0% | |
| ! | TAGTTTTTCTCTGATGTTGT+GGG | - | Chr4:66598069-66598088 | MsG0480021971.01.T01:intron | 30.0% |
| !! | CATGTTTGATGGATCTTTTA+GGG | - | Chr4:66597908-66597927 | MsG0480021971.01.T01:intron | 30.0% |
| !! | TCATGTTTGATGGATCTTTT+AGG | - | Chr4:66597907-66597926 | MsG0480021971.01.T01:intron | 30.0% |
| !!! | TTGGTTTTATTTGCTGACAA+TGG | - | Chr4:66598457-66598476 | MsG0480021971.01.T01:intron | 30.0% |
| AAATCATCTATGACCAACCT+TGG | + | Chr4:66597712-66597731 | None:intergenic | 35.0% | |
| AAGAAATCCTCTTCAATCGA+AGG | + | Chr4:66597293-66597312 | None:intergenic | 35.0% | |
| AATAATCATAATCAGCGGTG+TGG | + | Chr4:66596543-66596562 | None:intergenic | 35.0% | |
| AATATCAGTGTTGCAATCCA+TGG | - | Chr4:66597221-66597240 | MsG0480021971.01.T01:intron | 35.0% | |
| ACTGAATGAAACACCAAAAC+AGG | + | Chr4:66596813-66596832 | None:intergenic | 35.0% | |
| AGCTATGTGTTGTAGGTATA+AGG | - | Chr4:66597581-66597600 | MsG0480021971.01.T01:CDS | 35.0% | |
| ATAATCATAATCAGCGGTGT+GGG | + | Chr4:66596542-66596561 | None:intergenic | 35.0% | |
| ATTAGAGAAAATCCATGCAC+AGG | + | Chr4:66596499-66596518 | None:intergenic | 35.0% | |
| ATTTCCTAAATTCTCCCTCT+GGG | - | Chr4:66599483-66599502 | MsG0480021971.01.T01:CDS | 35.0% | |
| CAAAATGATACCTCAAGAAC+TGG | + | Chr4:66598887-66598906 | None:intergenic | 35.0% | |
| CAGCAAATAAAACCAATGGT+AGG | + | Chr4:66598453-66598472 | None:intergenic | 35.0% | |
| CTGAATGAAACACCAAAACA+GGG | + | Chr4:66596812-66596831 | None:intergenic | 35.0% | |
| CTTCCATGTCATGAGAATTA+GGG | - | Chr4:66596974-66596993 | MsG0480021971.01.T01:intron | 35.0% | |
| CTTGTCTGCAAACAATTCAT+GGG | + | Chr4:66598389-66598408 | None:intergenic | 35.0% | |
| GAAGCTGTGAAATTTAGAGA+AGG | - | Chr4:66597104-66597123 | MsG0480021971.01.T01:intron | 35.0% | |
| GATCAGGTTTCAAAAAGGTT+GGG | + | Chr4:66596156-66596175 | None:intergenic | 35.0% | |
| GCGGAAAATTTATGTTAGGT+AGG | - | Chr4:66598171-66598190 | MsG0480021971.01.T01:CDS | 35.0% | |
| GGGTTTATGGGAGTTTATTA+TGG | - | Chr4:66599503-66599522 | MsG0480021971.01.T01:CDS | 35.0% | |
| GTTGTTTGTGCTATGATTAC+TGG | + | Chr4:66599270-66599289 | None:intergenic | 35.0% | |
| TACTTCTGTGTAGATGTTGT+TGG | - | Chr4:66596636-66596655 | MsG0480021971.01.T01:intron | 35.0% | |
| TCACTCTGTATTGGATACTT+TGG | + | Chr4:66598690-66598709 | None:intergenic | 35.0% | |
| TCTTGTCTGCAAACAATTCA+TGG | + | Chr4:66598390-66598409 | None:intergenic | 35.0% | |
| TGATCAGGTTTCAAAAAGGT+TGG | + | Chr4:66596157-66596176 | None:intergenic | 35.0% | |
| TGTTTGAGTGATATTGTTCC+TGG | - | Chr4:66596082-66596101 | MsG0480021971.01.T01:three_prime_UTR | 35.0% | |
| TTAGAGAAAATCCATGCACA+GGG | + | Chr4:66596498-66596517 | None:intergenic | 35.0% | |
| TTCAAACTAACAATCTCAGG+AGG | + | Chr4:66597840-66597859 | None:intergenic | 35.0% | |
| ! | AGATTGTTAGTTTGAAGGGA+AGG | - | Chr4:66597844-66597863 | MsG0480021971.01.T01:intron | 35.0% |
| ! | CACCGCTGATTATGATTATT+TGG | - | Chr4:66596543-66596562 | MsG0480021971.01.T01:CDS | 35.0% |
| ! | CCTGAGATTGTTAGTTTGAA+GGG | - | Chr4:66597840-66597859 | MsG0480021971.01.T01:CDS | 35.0% |
| ! | GGGTTGCATTTTGTAACTTA+TGG | - | Chr4:66596994-66597013 | MsG0480021971.01.T01:intron | 35.0% |
| ! | GTAGTTTTTCTCTGATGTTG+TGG | - | Chr4:66598068-66598087 | MsG0480021971.01.T01:intron | 35.0% |
| ! | TCCTGAGATTGTTAGTTTGA+AGG | - | Chr4:66597839-66597858 | MsG0480021971.01.T01:CDS | 35.0% |
| ! | TTATGTTGTTTGTGCTGTTG+TGG | - | Chr4:66597370-66597389 | MsG0480021971.01.T01:intron | 35.0% |
| ! | TTGGTCATAGATGATTTTCC+TGG | - | Chr4:66597715-66597734 | MsG0480021971.01.T01:CDS | 35.0% |
| ! | TTTTCTCTGTTGTGTGACTT+TGG | - | Chr4:66597148-66597167 | MsG0480021971.01.T01:intron | 35.0% |
| !! | ATGTTGTTGGTTTGATGACT+GGG | - | Chr4:66596649-66596668 | MsG0480021971.01.T01:intron | 35.0% |
| !! | TTTGATGATGTATCCCTTTC+AGG | - | Chr4:66597794-66597813 | MsG0480021971.01.T01:CDS | 35.0% |
| !!! | AACCTTTTTGAAACCTGATC+AGG | - | Chr4:66596156-66596175 | MsG0480021971.01.T01:three_prime_UTR | 35.0% |
| !!! | GATGGTTTTGATTGATGAGA+AGG | - | Chr4:66596192-66596211 | MsG0480021971.01.T01:three_prime_UTR | 35.0% |
| !!! | TGTTTTGGTGTTTCATTCAG+TGG | - | Chr4:66596812-66596831 | MsG0480021971.01.T01:CDS | 35.0% |
| !!! | TTTTCGAGTTAACTGACGAA+AGG | - | Chr4:66596724-66596743 | MsG0480021971.01.T01:intron | 35.0% |
| AAATGAAGACAAAGGTGGAG+AGG | - | Chr4:66596455-66596474 | MsG0480021971.01.T01:CDS | 40.0% | |
| AAATTCTCCCTCTGGGTTTA+TGG | - | Chr4:66599490-66599509 | MsG0480021971.01.T01:CDS | 40.0% | |
| AACACTAAAAGTCCACAGCT+AGG | + | Chr4:66599540-66599559 | None:intergenic | 40.0% | |
| AACTACAAATGGATGGCAAC+CGG | + | Chr4:66598054-66598073 | None:intergenic | 40.0% | |
| AATGAAGACAAAGGTGGAGA+GGG | - | Chr4:66596456-66596475 | MsG0480021971.01.T01:CDS | 40.0% | |
| AATTCTCCCTCTGGGTTTAT+GGG | - | Chr4:66599491-66599510 | MsG0480021971.01.T01:CDS | 40.0% | |
| AGAGTATGTTAGGGATGGAA+AGG | - | Chr4:66596686-66596705 | MsG0480021971.01.T01:intron | 40.0% | |
| AGATTCATGCCACCATTAGA+AGG | - | Chr4:66596308-66596327 | MsG0480021971.01.T01:intron | 40.0% | |
| AGCACATGTATACCTACCAT+TGG | - | Chr4:66598438-66598457 | MsG0480021971.01.T01:intron | 40.0% | |
| AGCCTGATCAGGTTTCAAAA+AGG | + | Chr4:66596161-66596180 | None:intergenic | 40.0% | |
| AGGTCTATTATGTTGTGTGG+TGG | - | Chr4:66599367-66599386 | MsG0480021971.01.T01:intron | 40.0% | |
| ATAAACTCCCATAAACCCAG+AGG | + | Chr4:66599501-66599520 | None:intergenic | 40.0% | |
| ATAAATCCCATCCTCCACAA+TGG | + | Chr4:66597354-66597373 | None:intergenic | 40.0% | |
| ATACAGCAACTGCCTTCTAA+TGG | + | Chr4:66596323-66596342 | None:intergenic | 40.0% | |
| ATCCCTAACATACTCTCTCT+CGG | + | Chr4:66596682-66596701 | None:intergenic | 40.0% | |
| ATCCCTGAGATGATTCATGA+TGG | + | Chr4:66598348-66598367 | None:intergenic | 40.0% | |
| ATGTGATGCCTTAAGTTTGG+GGG | - | Chr4:66599057-66599076 | MsG0480021971.01.T01:intron | 40.0% | |
| ATGTGTTCCATATGGTTCCA+AGG | - | Chr4:66597495-66597514 | MsG0480021971.01.T01:intron | 40.0% | |
| CAACCCTAATTCTCATGACA+TGG | + | Chr4:66596980-66596999 | None:intergenic | 40.0% | |
| CACCATCATGAATCATCTCA+GGG | - | Chr4:66598343-66598362 | MsG0480021971.01.T01:CDS | 40.0% | |
| CAGAAGAAATTGGTAGAAGG+AGG | - | Chr4:66596349-66596368 | MsG0480021971.01.T01:intron | 40.0% | |
| CAGAGGGAGAATTTAGGAAA+TGG | + | Chr4:66599484-66599503 | None:intergenic | 40.0% | |
| CAGTAATATGCACCAGAATC+AGG | + | Chr4:66597458-66597477 | None:intergenic | 40.0% | |
| CATTGTAGTGGTTTCTTCAC+CGG | - | Chr4:66597741-66597760 | MsG0480021971.01.T01:CDS | 40.0% | |
| CATTTCCTAAATTCTCCCTC+TGG | - | Chr4:66599482-66599501 | MsG0480021971.01.T01:CDS | 40.0% | |
| CCCTTCAAACTAACAATCTC+AGG | + | Chr4:66597843-66597862 | None:intergenic | 40.0% | |
| GATGTGATGCCTTAAGTTTG+GGG | - | Chr4:66599056-66599075 | MsG0480021971.01.T01:intron | 40.0% | |
| GATTCTCTCCAGAAGATGAT+GGG | - | Chr4:66596869-66596888 | MsG0480021971.01.T01:CDS | 40.0% | |
| GCAGTGTTTGTGATGTTTGA+TGG | - | Chr4:66597636-66597655 | MsG0480021971.01.T01:intron | 40.0% | |
| GCTTCCATGTCATGAGAATT+AGG | - | Chr4:66596973-66596992 | MsG0480021971.01.T01:intron | 40.0% | |
| GGATGGAAAGGTTACTAAGA+TGG | - | Chr4:66596698-66596717 | MsG0480021971.01.T01:intron | 40.0% | |
| GGATGTGATGCCTTAAGTTT+GGG | - | Chr4:66599055-66599074 | MsG0480021971.01.T01:intron | 40.0% | |
| GTAACTACATCAAACCACAC+TGG | + | Chr4:66596578-66596597 | None:intergenic | 40.0% | |
| TAAACCCAGAGGGAGAATTT+AGG | + | Chr4:66599490-66599509 | None:intergenic | 40.0% | |
| TAAACTCCCATAAACCCAGA+GGG | + | Chr4:66599500-66599519 | None:intergenic | 40.0% | |
| TACTACCAGCAAGAAAACGA+AGG | - | Chr4:66599204-66599223 | MsG0480021971.01.T01:CDS | 40.0% | |
| TAGACTTATTCATGCTCGAG+AGG | + | Chr4:66599304-66599323 | None:intergenic | 40.0% | |
| TCGAGGTCTATTATGTTGTG+TGG | - | Chr4:66599364-66599383 | MsG0480021971.01.T01:intron | 40.0% | |
| TCTGGTGCATATTACTGCAA+GGG | - | Chr4:66597461-66597480 | MsG0480021971.01.T01:intron | 40.0% | |
| TGATTCTCTCCAGAAGATGA+TGG | - | Chr4:66596868-66596887 | MsG0480021971.01.T01:CDS | 40.0% | |
| TGGATGTGATGCCTTAAGTT+TGG | - | Chr4:66599054-66599073 | MsG0480021971.01.T01:intron | 40.0% | |
| TGGTAGGTATACATGTGCTT+TGG | + | Chr4:66598437-66598456 | None:intergenic | 40.0% | |
| TGGTGTTTCATTCAGTGGTA+AGG | - | Chr4:66596817-66596836 | MsG0480021971.01.T01:CDS | 40.0% | |
| TGTGAAGCATGTGTTCCATA+TGG | - | Chr4:66597487-66597506 | MsG0480021971.01.T01:intron | 40.0% | |
| TTCACAGCTTCTTCAAAAGG+AGG | + | Chr4:66597095-66597114 | None:intergenic | 40.0% | |
| TTCTGGTGCATATTACTGCA+AGG | - | Chr4:66597460-66597479 | MsG0480021971.01.T01:intron | 40.0% | |
| TTTAAAAGTCCAGACCTGTC+GGG | - | Chr4:66599094-66599113 | MsG0480021971.01.T01:intron | 40.0% | |
| TTTGATGTATGGCCTAAGAC+CGG | - | Chr4:66598032-66598051 | MsG0480021971.01.T01:CDS | 40.0% | |
| ! | AAACTTAAGGCATCACATCC+AGG | + | Chr4:66599055-66599074 | None:intergenic | 40.0% |
| ! | ATGATTCATGATGGTGCCAA+AGG | + | Chr4:66598339-66598358 | None:intergenic | 40.0% |
| ! | CCACAATTTTCAGCCTGAAA+GGG | + | Chr4:66597810-66597829 | None:intergenic | 40.0% |
| ! | CTATGAGTTGAATGCCATTG+TGG | - | Chr4:66597337-66597356 | MsG0480021971.01.T01:intron | 40.0% |
| ! | CTTTAAAAGTCCAGACCTGT+CGG | - | Chr4:66599093-66599112 | MsG0480021971.01.T01:intron | 40.0% |
| ! | GGGAAGGATGATGTTGTTTA+AGG | - | Chr4:66597860-66597879 | MsG0480021971.01.T01:intron | 40.0% |
| ! | TCCACAATTTTCAGCCTGAA+AGG | + | Chr4:66597811-66597830 | None:intergenic | 40.0% |
| ! | TGATGAGGTTAGTGATTTGG+TGG | - | Chr4:66598092-66598111 | MsG0480021971.01.T01:intron | 40.0% |
| ! | TTTTCCTGGTGACATTGTAG+TGG | - | Chr4:66597729-66597748 | MsG0480021971.01.T01:CDS | 40.0% |
| !! | GACACAAGTTGAGGATTTTG+TGG | - | Chr4:66598799-66598818 | MsG0480021971.01.T01:CDS | 40.0% |
| !! | GATGTTGTTGGTTTGATGAC+TGG | - | Chr4:66596648-66596667 | MsG0480021971.01.T01:intron | 40.0% |
| !!! | ATGGATCTTTTAGGGTGAAG+AGG | - | Chr4:66597916-66597935 | MsG0480021971.01.T01:intron | 40.0% |
| !!! | TGGATCTTTTAGGGTGAAGA+GGG | - | Chr4:66597917-66597936 | MsG0480021971.01.T01:intron | 40.0% |
| AAATGCTGCTCCAGTTCTTG+AGG | - | Chr4:66598874-66598893 | MsG0480021971.01.T01:intron | 45.0% | |
| AAGGTTGAGTGTGCGTTGTT+TGG | - | Chr4:66596836-66596855 | MsG0480021971.01.T01:CDS | 45.0% | |
| ACCCTACGAAAGGAAGGAAA+AGG | + | Chr4:66596284-66596303 | None:intergenic | 45.0% | |
| AGTTCACTTATCCCTGTGCA+TGG | - | Chr4:66596484-66596503 | MsG0480021971.01.T01:CDS | 45.0% | |
| ATCCTGCATGTCGTTGTCAT+AGG | - | Chr4:66597423-66597442 | MsG0480021971.01.T01:intron | 45.0% | |
| CAACTTAGTTTCTGCAGCCA+AGG | - | Chr4:66597692-66597711 | MsG0480021971.01.T01:CDS | 45.0% | |
| CCCTACGAAAGGAAGGAAAA+GGG | + | Chr4:66596283-66596302 | None:intergenic | 45.0% | |
| CCCTTTCAGGCTGAAAATTG+TGG | - | Chr4:66597807-66597826 | MsG0480021971.01.T01:CDS | 45.0% | |
| CTTATTCATGCTCGAGAGGA+TGG | + | Chr4:66599300-66599319 | None:intergenic | 45.0% | |
| GAAACCACTACAATGTCACC+AGG | + | Chr4:66597736-66597755 | None:intergenic | 45.0% | |
| GCAAACTGAACGACAACAAC+CGG | + | Chr4:66596914-66596933 | None:intergenic | 45.0% | |
| GCACCATCATGAATCATCTC+AGG | - | Chr4:66598342-66598361 | MsG0480021971.01.T01:CDS | 45.0% | |
| GGAATTCTGCACTTCTGTCA+AGG | - | Chr4:66597965-66597984 | MsG0480021971.01.T01:CDS | 45.0% | |
| GGGTGATGAGGTTAGTGATT+TGG | - | Chr4:66598089-66598108 | MsG0480021971.01.T01:intron | 45.0% | |
| GGTGGTCTATTGTGTTGTGT+TGG | - | Chr4:66599385-66599404 | MsG0480021971.01.T01:intron | 45.0% | |
| GTGCATGAATTCGTTGCCTT+TGG | - | Chr4:66598320-66598339 | MsG0480021971.01.T01:CDS | 45.0% | |
| TAGAGAGTCATGGAGGATCA+AGG | - | Chr4:66596105-66596124 | MsG0480021971.01.T01:three_prime_UTR | 45.0% | |
| TCAGGCTAACTCTGTTGAGA+TGG | - | Chr4:66596174-66596193 | MsG0480021971.01.T01:three_prime_UTR | 45.0% | |
| TGAATGCCATTGTGGAGGAT+GGG | - | Chr4:66597345-66597364 | MsG0480021971.01.T01:intron | 45.0% | |
| TGTTGAGGAGACACAAGTTG+AGG | - | Chr4:66598790-66598809 | MsG0480021971.01.T01:CDS | 45.0% | |
| TTAGTTTCTGCAGCCAAGGT+TGG | - | Chr4:66597696-66597715 | MsG0480021971.01.T01:CDS | 45.0% | |
| TTGAATGCCATTGTGGAGGA+TGG | - | Chr4:66597344-66597363 | MsG0480021971.01.T01:intron | 45.0% | |
| TTGTTCCTGGTAGAGAGTCA+TGG | - | Chr4:66596095-66596114 | MsG0480021971.01.T01:three_prime_UTR | 45.0% | |
| TTTCCTTCCTTTCGTAGGGT+GGG | - | Chr4:66596284-66596303 | MsG0480021971.01.T01:three_prime_UTR | 45.0% | |
| TTTGCAGCAGATCATGGCTA+TGG | - | Chr4:66599027-66599046 | MsG0480021971.01.T01:intron | 45.0% | |
| ! | ATCCATGGCATTGAACCTTC+TGG | - | Chr4:66597236-66597255 | MsG0480021971.01.T01:intron | 45.0% |
| ! | CCCTTTTCCTTCCTTTCGTA+GGG | - | Chr4:66596280-66596299 | MsG0480021971.01.T01:three_prime_UTR | 45.0% |
| ! | GAGAGAGAGTATGTTAGGGA+TGG | - | Chr4:66596681-66596700 | MsG0480021971.01.T01:intron | 45.0% |
| ! | GATGCTGAGTTGAGTGAACT+GGG | - | Chr4:66598752-66598771 | MsG0480021971.01.T01:CDS | 45.0% |
| ! | GATGTTGTTGTTACTCCAGC+TGG | - | Chr4:66598824-66598843 | MsG0480021971.01.T01:CDS | 45.0% |
| ! | GCAGTTTGTGTCTGATGATG+TGG | - | Chr4:66598730-66598749 | MsG0480021971.01.T01:CDS | 45.0% |
| ! | GTTGTGGAAGGTTTGGTTGA+GGG | - | Chr4:66597386-66597405 | MsG0480021971.01.T01:intron | 45.0% |
| ! | GTTGTTTGTGCTGTTGTGGA+AGG | - | Chr4:66597374-66597393 | MsG0480021971.01.T01:intron | 45.0% |
| ! | TCAACAGAGTTAGCCTGATC+AGG | + | Chr4:66596172-66596191 | None:intergenic | 45.0% |
| ! | TCCCTTTTCCTTCCTTTCGT+AGG | - | Chr4:66596279-66596298 | MsG0480021971.01.T01:three_prime_UTR | 45.0% |
| ! | TGAGTTGAATGCCATTGTGG+AGG | - | Chr4:66597340-66597359 | MsG0480021971.01.T01:intron | 45.0% |
| ! | TGCCGAGAGAGAGTATGTTA+GGG | - | Chr4:66596677-66596696 | MsG0480021971.01.T01:intron | 45.0% |
| ! | TGTTGTGGAAGGTTTGGTTG+AGG | - | Chr4:66597385-66597404 | MsG0480021971.01.T01:intron | 45.0% |
| ! | TTGTGCTGTTGTGGAAGGTT+TGG | - | Chr4:66597379-66597398 | MsG0480021971.01.T01:intron | 45.0% |
| ! | TTTTCCTTCCTTTCGTAGGG+TGG | - | Chr4:66596283-66596302 | MsG0480021971.01.T01:three_prime_UTR | 45.0% |
| !! | AGGAGTGTTACTCCTGATTC+TGG | - | Chr4:66597443-66597462 | MsG0480021971.01.T01:intron | 45.0% |
| !! | TGAGGTTAGTGATTTGGTGG+AGG | - | Chr4:66598095-66598114 | MsG0480021971.01.T01:intron | 45.0% |
| AATGGATGGCAACCGGTCTT+AGG | + | Chr4:66598047-66598066 | None:intergenic | 50.0% | |
| ACCACCATCCCCCAAACTTA+AGG | + | Chr4:66599068-66599087 | None:intergenic | 50.0% | |
| AGCCAAGAGGAATTTGCGCA+AGG | - | Chr4:66599153-66599172 | MsG0480021971.01.T01:CDS | 50.0% | |
| ATCCTCCATGACTCTCTACC+AGG | + | Chr4:66596103-66596122 | None:intergenic | 50.0% | |
| CACCAGAAGGTTCAATGCCA+TGG | + | Chr4:66597241-66597260 | None:intergenic | 50.0% | |
| CAGATCATGGCTATGGATCC+TGG | - | Chr4:66599034-66599053 | MsG0480021971.01.T01:intron | 50.0% | |
| CAGCAACTGCCTTCTAATGG+TGG | + | Chr4:66596320-66596339 | None:intergenic | 50.0% | |
| CATGGCAGAACTCAATCAGC+TGG | + | Chr4:66599330-66599349 | None:intergenic | 50.0% | |
| CGTTAGGCCTTCGATTGAAG+AGG | - | Chr4:66597283-66597302 | MsG0480021971.01.T01:intron | 50.0% | |
| CTCCTATGACAACGACATGC+AGG | + | Chr4:66597428-66597447 | None:intergenic | 50.0% | |
| CTCTGATGTTGTGGGTGATG+AGG | - | Chr4:66598077-66598096 | MsG0480021971.01.T01:intron | 50.0% | |
| GAATCTTCCCACCCTACGAA+AGG | + | Chr4:66596294-66596313 | None:intergenic | 50.0% | |
| GATGCCTTAAGTTTGGGGGA+TGG | - | Chr4:66599061-66599080 | MsG0480021971.01.T01:intron | 50.0% | |
| GCATCTCGCTCACTCTGTAT+TGG | + | Chr4:66598699-66598718 | None:intergenic | 50.0% | |
| GGTGACATGCAACTGTTGCT+TGG | - | Chr4:66597657-66597676 | MsG0480021971.01.T01:intron | 50.0% | |
| GTTTGGTTGAGGGAGAGGAT+TGG | - | Chr4:66597396-66597415 | MsG0480021971.01.T01:intron | 50.0% | |
| TCATACTTTGCAGTTGCCCC+TGG | - | Chr4:66596385-66596404 | MsG0480021971.01.T01:intron | 50.0% | |
| TCGAGAAGACTGCATCTGCA+GGG | - | Chr4:66597883-66597902 | MsG0480021971.01.T01:intron | 50.0% | |
| TCTGCAGGGGTCATGTTTGA+TGG | - | Chr4:66597897-66597916 | MsG0480021971.01.T01:intron | 50.0% | |
| TGAGGATCCTGAGGTTGTTG+AGG | - | Chr4:66598775-66598794 | MsG0480021971.01.T01:CDS | 50.0% | |
| TGCAGCTGCGGAGAAAAATG+TGG | - | Chr4:66599120-66599139 | MsG0480021971.01.T01:CDS | 50.0% | |
| TGCCTTGCGCAAATTCCTCT+TGG | + | Chr4:66599158-66599177 | None:intergenic | 50.0% | |
| TGGCTGTCAACAAAGCCAAG+AGG | - | Chr4:66599140-66599159 | MsG0480021971.01.T01:CDS | 50.0% | |
| TGTGTCTCCTCAACAACCTC+AGG | + | Chr4:66598785-66598804 | None:intergenic | 50.0% | |
| TTCCTGGTAGAGAGTCATGG+AGG | - | Chr4:66596098-66596117 | MsG0480021971.01.T01:three_prime_UTR | 50.0% | |
| ! | CTGCCGAGAGAGAGTATGTT+AGG | - | Chr4:66596676-66596695 | MsG0480021971.01.T01:intron | 50.0% |
| ! | GCACTGATGTTACCTAGCTG+TGG | - | Chr4:66599525-66599544 | MsG0480021971.01.T01:CDS | 50.0% |
| ! | GGATGCTGAGTTGAGTGAAC+TGG | - | Chr4:66598751-66598770 | MsG0480021971.01.T01:CDS | 50.0% |
| ! | GGTCATGTGTCTGAGACATC+TGG | - | Chr4:66598845-66598864 | MsG0480021971.01.T01:intron | 50.0% |
| ! | TGAGTTGAGTGAACTGGGTG+AGG | - | Chr4:66598757-66598776 | MsG0480021971.01.T01:CDS | 50.0% |
| !! | AGAAGATGATGGGTGGAGCT+GGG | - | Chr4:66596879-66596898 | MsG0480021971.01.T01:CDS | 50.0% |
| !! | TCTCTCCAGAAGATGATGGG+TGG | - | Chr4:66596872-66596891 | MsG0480021971.01.T01:CDS | 50.0% |
| !! | TTTGGTTGGTGAGTCCAGTG+TGG | - | Chr4:66596561-66596580 | MsG0480021971.01.T01:CDS | 50.0% |
| AGCGAAGGAACGACACCAGA+AGG | + | Chr4:66597254-66597273 | None:intergenic | 55.0% | |
| AGGTGCGTGTGCTTAGGATG+TGG | - | Chr4:66596125-66596144 | MsG0480021971.01.T01:three_prime_UTR | 55.0% | |
| CAGCTCCACCCATCATCTTC+TGG | + | Chr4:66596880-66596899 | None:intergenic | 55.0% | |
| CGAGAAGACTGCATCTGCAG+GGG | - | Chr4:66597884-66597903 | MsG0480021971.01.T01:intron | 55.0% | |
| CTTCCCACCCTACGAAAGGA+AGG | + | Chr4:66596290-66596309 | None:intergenic | 55.0% | |
| GCCTTAAGTTTGGGGGATGG+TGG | - | Chr4:66599064-66599083 | MsG0480021971.01.T01:intron | 55.0% | |
| GGATCAAGGTGCGTGTGCTT+AGG | - | Chr4:66596119-66596138 | MsG0480021971.01.T01:three_prime_UTR | 55.0% | |
| GGTGCGTGTGCTTAGGATGT+GGG | - | Chr4:66596126-66596145 | MsG0480021971.01.T01:three_prime_UTR | 55.0% | |
| GTCGAGAAGACTGCATCTGC+AGG | - | Chr4:66597882-66597901 | MsG0480021971.01.T01:intron | 55.0% | |
| GTCTCAGACACATGACCAGC+TGG | + | Chr4:66598842-66598861 | None:intergenic | 55.0% | |
| TACGGTATGCGCCAACACCA+GGG | + | Chr4:66596405-66596424 | None:intergenic | 55.0% | |
| TCAATCGAAGGCCTAACGCG+AGG | + | Chr4:66597281-66597300 | None:intergenic | 55.0% | |
| TGAACTGGGTGAGGATCCTG+AGG | - | Chr4:66598766-66598785 | MsG0480021971.01.T01:CDS | 55.0% | |
| TGCTGAAGAGACACAGCCCA+AGG | - | Chr4:66598128-66598147 | MsG0480021971.01.T01:intron | 55.0% | |
| TGGTTGAGGGAGAGGATTGG+TGG | - | Chr4:66597399-66597418 | MsG0480021971.01.T01:intron | 55.0% | |
| TTTGCAGTTGCCCCTGGTGT+TGG | - | Chr4:66596391-66596410 | MsG0480021971.01.T01:intron | 55.0% | |
| ! | CGCAAGGCATTTGACGCAGT+TGG | - | Chr4:66599169-66599188 | MsG0480021971.01.T01:CDS | 55.0% |
| ! | GGAAGGTTTGGTTGAGGGAG+AGG | - | Chr4:66597391-66597410 | MsG0480021971.01.T01:intron | 55.0% |
| ! | GGGAGCCTTCGTTTTCTTGC+TGG | + | Chr4:66599212-66599231 | None:intergenic | 55.0% |
| !! | CAGAAGATGATGGGTGGAGC+TGG | - | Chr4:66596878-66596897 | MsG0480021971.01.T01:CDS | 55.0% |
| !! | GAAGATGATGGGTGGAGCTG+GGG | - | Chr4:66596880-66596899 | MsG0480021971.01.T01:CDS | 55.0% |
| !! | TCTGGTGTCGTTCCTTCGCT+TGG | - | Chr4:66597254-66597273 | MsG0480021971.01.T01:intron | 55.0% |
| ACGGTATGCGCCAACACCAG+GGG | + | Chr4:66596404-66596423 | None:intergenic | 60.0% | |
| CGGTGTGGGCGCAAACTTCT+TGG | + | Chr4:66596528-66596547 | None:intergenic | 60.0% | |
| CTAACGCGAGGACCAAGCGA+AGG | + | Chr4:66597269-66597288 | None:intergenic | 60.0% | |
| CTTCGCTTGGTCCTCGCGTT+AGG | - | Chr4:66597267-66597286 | MsG0480021971.01.T01:intron | 60.0% | |
| GCGTGTGCTTAGGATGTGGG+AGG | - | Chr4:66596129-66596148 | MsG0480021971.01.T01:three_prime_UTR | 60.0% | |
| GTACGGTATGCGCCAACACC+AGG | + | Chr4:66596406-66596425 | None:intergenic | 60.0% | |
| !! | ATGATGGGTGGAGCTGGGGA+AGG | - | Chr4:66596884-66596903 | MsG0480021971.01.T01:CDS | 60.0% |
| TGGAGCTGGGGAAGGACTGC+CGG | - | Chr4:66596892-66596911 | MsG0480021971.01.T01:CDS | 65.0% | |
| CCTGTCGGGAGCTGCAGCTG+CGG | - | Chr4:66599108-66599127 | MsG0480021971.01.T01:CDS | 70.0% | |
| GCTGCAGCTCCCGACAGGTC+TGG | + | Chr4:66599106-66599125 | None:intergenic | 70.0% | |
| CCGCAGCTGCAGCTCCCGAC+AGG | + | Chr4:66599111-66599130 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 66596064 | 66599612 | 66596064 | ID=MsG0480021971.01;Name=MsG0480021971.01 |
| Chr4 | mRNA | 66596064 | 66599612 | 66596064 | ID=MsG0480021971.01.T01;Parent=MsG0480021971.01;Name=MsG0480021971.01.T01;_AED=0.14;_eAED=0.14;_QI=0|0.90|0.83|1|0.90|0.83|12|257|583 |
| Chr4 | exon | 66596064 | 66596313 | 66596064 | ID=MsG0480021971.01.T01:exon:8119;Parent=MsG0480021971.01.T01 |
| Chr4 | exon | 66596420 | 66596639 | 66596420 | ID=MsG0480021971.01.T01:exon:8118;Parent=MsG0480021971.01.T01 |
| Chr4 | exon | 66596781 | 66596942 | 66596781 | ID=MsG0480021971.01.T01:exon:8117;Parent=MsG0480021971.01.T01 |
| Chr4 | exon | 66597527 | 66597604 | 66597527 | ID=MsG0480021971.01.T01:exon:8116;Parent=MsG0480021971.01.T01 |
| Chr4 | exon | 66597690 | 66597860 | 66597690 | ID=MsG0480021971.01.T01:exon:8115;Parent=MsG0480021971.01.T01 |
| Chr4 | exon | 66597963 | 66598080 | 66597963 | ID=MsG0480021971.01.T01:exon:8114;Parent=MsG0480021971.01.T01 |
| Chr4 | exon | 66598160 | 66598447 | 66598160 | ID=MsG0480021971.01.T01:exon:8113;Parent=MsG0480021971.01.T01 |
| Chr4 | exon | 66598550 | 66598634 | 66598550 | ID=MsG0480021971.01.T01:exon:8112;Parent=MsG0480021971.01.T01 |
| Chr4 | exon | 66598723 | 66598844 | 66598723 | ID=MsG0480021971.01.T01:exon:8111;Parent=MsG0480021971.01.T01 |
| Chr4 | exon | 66598931 | 66599027 | 66598931 | ID=MsG0480021971.01.T01:exon:8110;Parent=MsG0480021971.01.T01 |
| Chr4 | exon | 66599108 | 66599375 | 66599108 | ID=MsG0480021971.01.T01:exon:8109;Parent=MsG0480021971.01.T01 |
| Chr4 | exon | 66599463 | 66599612 | 66599463 | ID=MsG0480021971.01.T01:exon:8108;Parent=MsG0480021971.01.T01 |
| Chr4 | CDS | 66599463 | 66599612 | 66599463 | ID=MsG0480021971.01.T01:cds;Parent=MsG0480021971.01.T01 |
| Chr4 | CDS | 66599108 | 66599375 | 66599108 | ID=MsG0480021971.01.T01:cds;Parent=MsG0480021971.01.T01 |
| Chr4 | CDS | 66598931 | 66599027 | 66598931 | ID=MsG0480021971.01.T01:cds;Parent=MsG0480021971.01.T01 |
| Chr4 | CDS | 66598723 | 66598844 | 66598723 | ID=MsG0480021971.01.T01:cds;Parent=MsG0480021971.01.T01 |
| Chr4 | CDS | 66598550 | 66598634 | 66598550 | ID=MsG0480021971.01.T01:cds;Parent=MsG0480021971.01.T01 |
| Chr4 | CDS | 66598160 | 66598447 | 66598160 | ID=MsG0480021971.01.T01:cds;Parent=MsG0480021971.01.T01 |
| Chr4 | CDS | 66597963 | 66598080 | 66597963 | ID=MsG0480021971.01.T01:cds;Parent=MsG0480021971.01.T01 |
| Chr4 | CDS | 66597690 | 66597860 | 66597690 | ID=MsG0480021971.01.T01:cds;Parent=MsG0480021971.01.T01 |
| Chr4 | CDS | 66597527 | 66597604 | 66597527 | ID=MsG0480021971.01.T01:cds;Parent=MsG0480021971.01.T01 |
| Chr4 | CDS | 66596781 | 66596942 | 66596781 | ID=MsG0480021971.01.T01:cds;Parent=MsG0480021971.01.T01 |
| Chr4 | CDS | 66596427 | 66596639 | 66596427 | ID=MsG0480021971.01.T01:cds;Parent=MsG0480021971.01.T01 |
| Chr4 | three_prime_UTR | 66596420 | 66596426 | 66596420 | ID=MsG0480021971.01.T01:three_prime_utr;Parent=MsG0480021971.01.T01 |
| Chr4 | three_prime_UTR | 66596064 | 66596313 | 66596064 | ID=MsG0480021971.01.T01:three_prime_utr;Parent=MsG0480021971.01.T01 |
| Gene Sequence |
| Protein sequence |
