AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022469.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022469.01.T01 MTR_4g089100 98.361 183 3 0 26 208 1 183 1.16e-130 365
MsG0480022469.01.T01 MTR_2g079830 59.064 171 69 1 26 195 1 171 9.13e-62 191
MsG0480022469.01.T01 MTR_5g057670 47.273 165 86 1 28 191 7 171 1.12e-52 167
MsG0480022469.01.T01 MTR_5g057335 47.273 165 86 1 28 191 7 171 1.12e-52 167
MsG0480022469.01.T01 MTR_1g109660 43.373 166 93 1 28 192 4 169 1.57e-41 139
MsG0480022469.01.T01 MTR_1g109700 38.922 167 100 2 24 190 1 165 4.95e-32 115
MsG0480022469.01.T01 MTR_4g077250 27.607 163 114 3 34 195 11 170 1.62e-12 64.3
MsG0480022469.01.T01 MTR_1g109690 34.000 100 64 2 24 123 1 98 7.73e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022469.01.T01 AT1G61065 67.760 183 56 2 26 208 1 180 1.36e-76 228
MsG0480022469.01.T01 AT4G27435 57.803 173 72 1 26 197 1 173 1.26e-70 213
MsG0480022469.01.T01 AT1G52910 52.299 174 81 2 26 197 1 174 1.04e-62 192
MsG0480022469.01.T01 AT3G15480 50.289 173 84 2 26 196 1 173 1.16e-58 182
MsG0480022469.01.T01 AT1G13380 45.029 171 88 3 27 196 6 171 1.15e-45 150
MsG0480022469.01.T01 AT1G68220 39.326 178 105 3 26 200 1 178 2.63e-37 129
MsG0480022469.01.T01 AT5G17210 29.379 177 116 5 34 205 11 183 1.97e-14 69.3

Find 77 sgRNAs with CRISPR-Local

Find 351 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATGGTCTTTAATTAAATT+TGG 0.118983 4:-72898723 MsG0480022469.01.T01:three_prime_UTR
ACTTATTGTGACATGATTTA+AGG 0.123222 4:+72898689 None:intergenic
TATGGCTTCTTCTCTGTTAC+TGG 0.161308 4:-72902816 MsG0480022469.01.T01:CDS
ACTTTCTACCTTCAGTGTTT+TGG 0.167759 4:+72899922 None:intergenic
CACAAAGTATAGAGATTTAT+TGG 0.188851 4:-72899054 MsG0480022469.01.T01:CDS
GCAGCTTTCATTGTTCTTAC+AGG 0.247267 4:-72898978 MsG0480022469.01.T01:CDS
ACCTTGAGGAAAGGAGTATT+TGG 0.252984 4:-72899008 MsG0480022469.01.T01:CDS
TTCTTCTCTGTTACTGGTTG+TGG 0.346559 4:-72902810 MsG0480022469.01.T01:CDS
CTTATTGTGACATGATTTAA+GGG 0.353255 4:+72898690 None:intergenic
TATTAACTTGGCTTATTACA+TGG 0.364738 4:-72898814 MsG0480022469.01.T01:three_prime_UTR
CGGCCACCACCTCCATCAAC+GGG 0.375088 4:+72903864 None:intergenic
TTCCTCAAGGTTTGACATGA+AGG 0.384581 4:+72899020 None:intergenic
TTGCCACCGGCCTAGGTGTT+GGG 0.395204 4:-72899878 MsG0480022469.01.T01:CDS
TCTGACATTGCCACCGGCCT+AGG 0.400328 4:-72899885 MsG0480022469.01.T01:CDS
TTGTGATTCTTACTTCATAT+AGG 0.401046 4:+72898625 None:intergenic
TAAACAAATTGCCCATGATC+TGG 0.409000 4:+72899767 None:intergenic
ACAAAGTATAGAGATTTATT+GGG 0.411928 4:-72899053 MsG0480022469.01.T01:CDS
ATTGCCACCGGCCTAGGTGT+TGG 0.437881 4:-72899879 MsG0480022469.01.T01:CDS
TGCAAGTCAAGTGATCATTA+TGG 0.441738 4:-72899838 MsG0480022469.01.T01:CDS
GTCGTCTCCTCCTCAGATTT+CGG 0.445688 4:+72903844 None:intergenic
GTTATGAGGTGCCCCGTTGA+TGG 0.449217 4:-72903876 MsG0480022469.01.T01:CDS
TAATGCAATGTATCCCAACT+TGG 0.460162 4:-72898852 MsG0480022469.01.T01:three_prime_UTR
TGATTCTTACTTCATATAGG+TGG 0.473674 4:+72898628 None:intergenic
GATTCTTACTTCATATAGGT+GGG 0.477121 4:+72898629 None:intergenic
GACCTAGTGGATCCAGATCA+TGG 0.481470 4:-72899779 MsG0480022469.01.T01:CDS
CTGTTGCTGCTGAGCAGAGA+AGG 0.494310 4:-72902754 MsG0480022469.01.T01:CDS
AATACACTTCCTCCCAAGTT+GGG 0.495844 4:+72898839 None:intergenic
TTTGTTTAGAGTTTAGACTA+TGG 0.496787 4:-72898740 MsG0480022469.01.T01:three_prime_UTR
TCGGCCACCACCTCCATCAA+CGG 0.511798 4:+72903863 None:intergenic
GACTTGCAACAAGGATAAAG+AGG 0.511852 4:+72899853 None:intergenic
TAATACACTTCCTCCCAAGT+TGG 0.515990 4:+72898838 None:intergenic
AGGAAAGGAGTATTTGGAGC+TGG 0.522435 4:-72899002 MsG0480022469.01.T01:CDS
GCTGCGTCATGTCTTCTAGC+GGG 0.522839 4:-72899098 MsG0480022469.01.T01:CDS
TAACTAGATGCTTGTGCTGT+GGG 0.523620 4:-72899812 MsG0480022469.01.T01:CDS
CTACTTGTAATTATGAAGCT+AGG 0.525615 4:-72898774 MsG0480022469.01.T01:three_prime_UTR
TCCAAATACTCCTTTCCTCA+AGG 0.531125 4:+72899007 None:intergenic
GAAGTGTATTACTATTAACT+TGG 0.532411 4:-72898826 MsG0480022469.01.T01:three_prime_UTR
TGCCCCGTTGATGGAGGTGG+TGG 0.534564 4:-72903867 MsG0480022469.01.T01:CDS
AGGTGCCCCGTTGATGGAGG+TGG 0.541019 4:-72903870 MsG0480022469.01.T01:CDS
AGATCTTGAGCTGATAGCTA+TGG 0.543948 4:-72902834 MsG0480022469.01.T01:CDS
TATTACATGGATGTGAATTG+TGG 0.545400 4:-72898801 MsG0480022469.01.T01:three_prime_UTR
ATTACATGGATGTGAATTGT+GGG 0.545568 4:-72898800 MsG0480022469.01.T01:three_prime_UTR
GAGGGACCCAACACCTAGGC+CGG 0.547158 4:+72899872 None:intergenic
TTAAATTTACAGATTACTCA+TGG 0.550390 4:+72898872 None:intergenic
GTAACTAGATGCTTGTGCTG+TGG 0.554303 4:-72899813 MsG0480022469.01.T01:CDS
TGCTGCGTCATGTCTTCTAG+CGG 0.556620 4:-72899099 MsG0480022469.01.T01:CDS
TCTGGATCCACTAGGTCTCA+TGG 0.558877 4:+72899785 None:intergenic
ACCTAGTGGATCCAGATCAT+GGG 0.563046 4:-72899778 MsG0480022469.01.T01:CDS
AATGCAATGTATCCCAACTT+GGG 0.564971 4:-72898851 MsG0480022469.01.T01:three_prime_UTR
CACACCTGTGTCTCTAGCAT+AGG 0.565825 4:+72898896 None:intergenic
AATCACAATGGAGGGTAGGA+TGG 0.567785 4:-72898610 MsG0480022469.01.T01:three_prime_UTR
ACACCTGTGTCTCTAGCATA+GGG 0.569459 4:+72898897 None:intergenic
TAAGAATCACAATGGAGGGT+AGG 0.573015 4:-72898614 MsG0480022469.01.T01:three_prime_UTR
ATAAATCTCTATACTTTGTG+TGG 0.577844 4:+72899057 None:intergenic
GAAGTAAGAATCACAATGGA+GGG 0.589550 4:-72898618 MsG0480022469.01.T01:three_prime_UTR
ATTCTTACTTCATATAGGTG+GGG 0.596307 4:+72898630 None:intergenic
TTTGTTTATTCATCACTACC+TGG 0.599794 4:-72899752 MsG0480022469.01.T01:intron
TATGATTCTGACATTGCCAC+CGG 0.606011 4:-72899891 MsG0480022469.01.T01:CDS
TCATGTCAAACCTTGAGGAA+AGG 0.610389 4:-72899017 MsG0480022469.01.T01:CDS
CACCTTCATGTCAAACCTTG+AGG 0.611145 4:-72899022 MsG0480022469.01.T01:CDS
TGAAGTAAGAATCACAATGG+AGG 0.614725 4:-72898619 MsG0480022469.01.T01:three_prime_UTR
CCTCCCTATGCTAGAGACAC+AGG 0.615801 4:-72898900 MsG0480022469.01.T01:CDS
GGGAGAGCCATGAGACCTAG+TGG 0.628075 4:-72899792 MsG0480022469.01.T01:CDS
GGACCCAACACCTAGGCCGG+TGG 0.639370 4:+72899875 None:intergenic
ACTTGCAACAAGGATAAAGA+GGG 0.642274 4:+72899854 None:intergenic
ATGAGGTGCCCCGTTGATGG+AGG 0.645354 4:-72903873 MsG0480022469.01.T01:CDS
CTGTGTCTCTAGCATAGGGA+GGG 0.646357 4:+72898901 None:intergenic
AATTTAGCCCAAAACACTGA+AGG 0.648878 4:-72899930 MsG0480022469.01.T01:CDS
GCAATGTATCCCAACTTGGG+AGG 0.649916 4:-72898848 MsG0480022469.01.T01:three_prime_UTR
TAAAGAGGGACCCAACACCT+AGG 0.661021 4:+72899868 None:intergenic
GCCCATGATCTGGATCCACT+AGG 0.663327 4:+72899777 None:intergenic
TGATCACTTGACTTGCAACA+AGG 0.664373 4:+72899844 None:intergenic
GAGGTGGTGGCCGAAATCTG+AGG 0.667765 4:-72903854 MsG0480022469.01.T01:CDS
CCTGTGTCTCTAGCATAGGG+AGG 0.667869 4:+72898900 None:intergenic
GTGGTGGCCGAAATCTGAGG+AGG 0.679030 4:-72903851 MsG0480022469.01.T01:CDS
ATATGAAGTAAGAATCACAA+TGG 0.686600 4:-72898622 MsG0480022469.01.T01:three_prime_UTR
GGCCACCACCTCCATCAACG+GGG 0.734842 4:+72903865 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAACATAAAATTTCT+AGG - Chr4:72901749-72901768 MsG0480022469.01.T01:intron 10.0%
!! TAAAAAAAAAACATAATTAC+GGG + Chr4:72903120-72903139 None:intergenic 10.0%
!!! AACTTTAAATAGATTTTTAA+CGG + Chr4:72899783-72899802 None:intergenic 10.0%
!!! AATACAATATTTTATACTAT+TGG + Chr4:72901791-72901810 None:intergenic 10.0%
!!! ACATTTGATTTTAAATATAA+GGG + Chr4:72901298-72901317 None:intergenic 10.0%
!!! ATATTACTAATAATTTTCAA+AGG - Chr4:72898950-72898969 MsG0480022469.01.T01:CDS 10.0%
!!! TTAAACAATAAAATATTTTG+AGG - Chr4:72903242-72903261 MsG0480022469.01.T01:intron 10.0%
!!! TTTGATTTAATTTAATTTTG+TGG - Chr4:72899616-72899635 MsG0480022469.01.T01:intron 10.0%
!! AAAAGATATAACATAATTAC+GGG + Chr4:72903152-72903171 None:intergenic 15.0%
!! AATTAAAACACTAAAAAACT+TGG - Chr4:72899398-72899417 MsG0480022469.01.T01:intron 15.0%
!! AATTAAAATTAAAATGCGTA+GGG - Chr4:72899360-72899379 MsG0480022469.01.T01:intron 15.0%
!! ATTTAAAAAATTGAAAGCAA+AGG - Chr4:72902167-72902186 MsG0480022469.01.T01:intron 15.0%
!! GAAAAGATATAACATAATTA+CGG + Chr4:72903153-72903172 None:intergenic 15.0%
!! TAATTAAAATTAAAATGCGT+AGG - Chr4:72899359-72899378 MsG0480022469.01.T01:intron 15.0%
!!! AATACTTTTCCTTTTATTAT+TGG - Chr4:72899240-72899259 MsG0480022469.01.T01:intron 15.0%
!!! AATGTTTCTAATGTTAAAAT+TGG - Chr4:72902474-72902493 MsG0480022469.01.T01:intron 15.0%
!!! ATTGATTTCATAAGTTATTA+TGG - Chr4:72902089-72902108 MsG0480022469.01.T01:intron 15.0%
!!! ATTTTTAGCAATAATTAGTT+TGG - Chr4:72902768-72902787 MsG0480022469.01.T01:CDS 15.0%
!!! GACATTTGATTTTAAATATA+AGG + Chr4:72901299-72901318 None:intergenic 15.0%
!!! TAGAGAATTAAAATTGATTT+TGG + Chr4:72900332-72900351 None:intergenic 15.0%
!!! TTATTTGTTTTTCTAATAAC+AGG - Chr4:72902520-72902539 MsG0480022469.01.T01:intron 15.0%
!!! TTTTTGTTTAGTAGTATAAA+AGG - Chr4:72899826-72899845 MsG0480022469.01.T01:CDS 15.0%
!! AAATAATAGTGTATATCATG+AGG - Chr4:72899062-72899081 MsG0480022469.01.T01:CDS 20.0%
!! AAATGATTCATAACTTAAAG+TGG + Chr4:72900064-72900083 None:intergenic 20.0%
!! AATCTGAACATTCATATTTA+AGG - Chr4:72902949-72902968 MsG0480022469.01.T01:intron 20.0%
!! ACAAAGTATAGAGATTTATT+GGG - Chr4:72903422-72903441 MsG0480022469.01.T01:intron 20.0%
!! ACTAATTAAAGTAAGTAAAC+TGG + Chr4:72899438-72899457 None:intergenic 20.0%
!! ATTAAAATTAAAATGCGTAG+GGG - Chr4:72899361-72899380 MsG0480022469.01.T01:intron 20.0%
!! ATTACACAAACAAATAAAAG+TGG + Chr4:72899201-72899220 None:intergenic 20.0%
!! CAAGTTAGAATTAATAATAG+AGG - Chr4:72900272-72900291 MsG0480022469.01.T01:intron 20.0%
!! CTATGGTCTTTAATTAAATT+TGG - Chr4:72903752-72903771 MsG0480022469.01.T01:intron 20.0%
!! GAAAGAAGTCATATAAAAAA+GGG + Chr4:72903059-72903078 None:intergenic 20.0%
!! TATACACACTTATCATAAAA+GGG - Chr4:72902021-72902040 MsG0480022469.01.T01:intron 20.0%
!! TCAAAAAAAAATCTCTTTAG+AGG + Chr4:72901085-72901104 None:intergenic 20.0%
!! TCATATTTAAGGACAAATAT+TGG - Chr4:72902960-72902979 MsG0480022469.01.T01:intron 20.0%
!! TGAAAGAAGTCATATAAAAA+AGG + Chr4:72903060-72903079 None:intergenic 20.0%
!! TTAAATTTACAGATTACTCA+TGG + Chr4:72903606-72903625 None:intergenic 20.0%
!!! AATCAAATATCTAATTTGCT+CGG + Chr4:72900747-72900766 None:intergenic 20.0%
!!! AGTTTTTCAAAAGCTAATAA+TGG - Chr4:72903545-72903564 MsG0480022469.01.T01:intron 20.0%
!!! CTAAAGAGATTTTTTTTTGA+AGG - Chr4:72901085-72901104 MsG0480022469.01.T01:intron 20.0%
!!! CTATTATTTATGTTTTCTGA+CGG + Chr4:72899051-72899070 None:intergenic 20.0%
!!! TGTCTTGTTTTGTTTTTATT+TGG - Chr4:72899502-72899521 MsG0480022469.01.T01:intron 20.0%
!!! TGTTTCCATTTATTTTATTG+AGG + Chr4:72901166-72901185 None:intergenic 20.0%
!!! TTGAGGCAATTTTTAAAATA+AGG + Chr4:72898976-72898995 None:intergenic 20.0%
! AAACAAATAAAAGTGGAGTT+TGG + Chr4:72899194-72899213 None:intergenic 25.0%
! AAACATAATTACGGGTATAT+TGG + Chr4:72903112-72903131 None:intergenic 25.0%
! AAATAAATGGAAACAGCTTA+TGG - Chr4:72901171-72901190 MsG0480022469.01.T01:intron 25.0%
! AACAGAATCTATTCTCATAT+TGG + Chr4:72900813-72900832 None:intergenic 25.0%
! AATATGAATGTTCAGATTGT+CGG + Chr4:72902947-72902966 None:intergenic 25.0%
! ACAAGAGAAAACATCAAATT+TGG + Chr4:72903295-72903314 None:intergenic 25.0%
! ACTTATTGTGACATGATTTA+AGG + Chr4:72903789-72903808 None:intergenic 25.0%
! AGGCAAAGTAATAATTATTG+TGG + Chr4:72902333-72902352 None:intergenic 25.0%
! AGTCACTTGAACAATAAATT+AGG - Chr4:72900202-72900221 MsG0480022469.01.T01:intron 25.0%
! ATAAATCTCTATACTTTGTG+TGG + Chr4:72903421-72903440 None:intergenic 25.0%
! ATATAAGGGTGAAAAAATGT+AGG + Chr4:72901284-72901303 None:intergenic 25.0%
! ATATGAAGTAAGAATCACAA+TGG - Chr4:72903853-72903872 MsG0480022469.01.T01:CDS 25.0%
! ATTATTACTTTGCCTATAGT+TGG - Chr4:72902338-72902357 MsG0480022469.01.T01:intron 25.0%
! CACAAAGTATAGAGATTTAT+TGG - Chr4:72903421-72903440 MsG0480022469.01.T01:intron 25.0%
! CATAATCTTAATCCTAAGTT+CGG + Chr4:72901549-72901568 None:intergenic 25.0%
! CATCAAAAACTTAGTCATAA+AGG - Chr4:72901324-72901343 MsG0480022469.01.T01:intron 25.0%
! CTTATTGTGACATGATTTAA+GGG + Chr4:72903788-72903807 None:intergenic 25.0%
! GAAGTGTATTACTATTAACT+TGG - Chr4:72903649-72903668 MsG0480022469.01.T01:intron 25.0%
! GACACAATAATGACATAATA+CGG - Chr4:72900864-72900883 MsG0480022469.01.T01:intron 25.0%
! GAGTTTGTAAATTCAATAAC+AGG + Chr4:72901358-72901377 None:intergenic 25.0%
! GTAACATGTGATAAATTCTA+TGG - Chr4:72903175-72903194 MsG0480022469.01.T01:intron 25.0%
! GTATACACACTTATCATAAA+AGG - Chr4:72902020-72902039 MsG0480022469.01.T01:intron 25.0%
! GTCACAAAAGATATAAAAAC+AGG + Chr4:72899585-72899604 None:intergenic 25.0%
! GTCACTTGAACAATAAATTA+GGG - Chr4:72900203-72900222 MsG0480022469.01.T01:intron 25.0%
! GTGTTTGAATCATTTATACT+TGG + Chr4:72901580-72901599 None:intergenic 25.0%
! GTTATCTAGTAATTCTTGAT+GGG - Chr4:72903313-72903332 MsG0480022469.01.T01:intron 25.0%
! GTTGTAATTAACAAGCAAAT+AGG - Chr4:72900839-72900858 MsG0480022469.01.T01:intron 25.0%
! TAACTGATTGTAATTACAAG+TGG - Chr4:72900150-72900169 MsG0480022469.01.T01:intron 25.0%
! TAGCTCCTCAATAAAATAAA+TGG - Chr4:72901158-72901177 MsG0480022469.01.T01:intron 25.0%
! TATAAGGGTGAAAAAATGTA+GGG + Chr4:72901283-72901302 None:intergenic 25.0%
! TGAATCGATCCAATAATAAA+AGG + Chr4:72899252-72899271 None:intergenic 25.0%
! TGTTATCTAGTAATTCTTGA+TGG - Chr4:72903312-72903331 MsG0480022469.01.T01:intron 25.0%
! TTATTACTTTGCCTATAGTT+GGG - Chr4:72902339-72902358 MsG0480022469.01.T01:intron 25.0%
! TTATTCAATGAGCTTATCAT+AGG + Chr4:72901206-72901225 None:intergenic 25.0%
! TTGTGATTCTTACTTCATAT+AGG + Chr4:72903853-72903872 None:intergenic 25.0%
! TTTATTAGAATAGAACAACC+TGG + Chr4:72899554-72899573 None:intergenic 25.0%
!! AAACATAAAATTTCTAGGTG+AGG - Chr4:72901754-72901773 MsG0480022469.01.T01:intron 25.0%
!! AAATCCTCTAAAGAGATATT+TGG - Chr4:72901109-72901128 MsG0480022469.01.T01:intron 25.0%
!! AAATTTTGTAAGTGTGTGTT+TGG - Chr4:72900099-72900118 MsG0480022469.01.T01:intron 25.0%
!! AACAACTCTTTTCAATTAAG+TGG + Chr4:72900384-72900403 None:intergenic 25.0%
!! ACACTTACAAAATTTTCGAT+TGG + Chr4:72900094-72900113 None:intergenic 25.0%
!! ACTTACAAAATTTTCGATTG+GGG + Chr4:72900092-72900111 None:intergenic 25.0%
!! CACTTACAAAATTTTCGATT+GGG + Chr4:72900093-72900112 None:intergenic 25.0%
!! CAGAAAGAAGATTAGTTAAT+GGG + Chr4:72900416-72900435 None:intergenic 25.0%
!! GATAAACACCATCTAAAATT+AGG + Chr4:72899021-72899040 None:intergenic 25.0%
!! GTTTAGTTCAATGAGTTTAA+TGG + Chr4:72901527-72901546 None:intergenic 25.0%
!! TATTAACTTGGCTTATTACA+TGG - Chr4:72903661-72903680 MsG0480022469.01.T01:intron 25.0%
!! TGTAAAAATCACACGTTTTA+GGG - Chr4:72900226-72900245 MsG0480022469.01.T01:intron 25.0%
!! TTTGTTTAGAGTTTAGACTA+TGG - Chr4:72903735-72903754 MsG0480022469.01.T01:intron 25.0%
!! TTTTATTGAGGAGCTAATTA+AGG + Chr4:72901154-72901173 None:intergenic 25.0%
!! TTTTCAAAAGCTAATAATGG+TGG - Chr4:72903548-72903567 MsG0480022469.01.T01:intron 25.0%
!!! AAAATTGATTTTGGCATGTT+TGG + Chr4:72900323-72900342 None:intergenic 25.0%
!!! CTTGTTGTATTTCTGAAATT+AGG - Chr4:72899915-72899934 MsG0480022469.01.T01:CDS 25.0%
!!! TAAAAGGAAAAGTATTGAAG+TGG + Chr4:72899236-72899255 None:intergenic 25.0%
AAACACAACTTTATATCTCC+CGG - Chr4:72901594-72901613 MsG0480022469.01.T01:intron 30.0%
AAATGAAGAGACTGAGTTAT+AGG + Chr4:72902375-72902394 None:intergenic 30.0%
AAGAACTATCAAAACAGTTG+AGG + Chr4:72900031-72900050 None:intergenic 30.0%
AATGAAGAGACTGAGTTATA+GGG + Chr4:72902374-72902393 None:intergenic 30.0%
AATGTAGAAAAGCTGGATAT+AGG - Chr4:72900676-72900695 MsG0480022469.01.T01:intron 30.0%
ACATTAATAGCACTAGATGT+TGG + Chr4:72901460-72901479 None:intergenic 30.0%
ATAAGGGTGAAAAAATGTAG+GGG + Chr4:72901282-72901301 None:intergenic 30.0%
ATAATGAGAGTCGTTACAAA+CGG - Chr4:72898795-72898814 MsG0480022469.01.T01:three_prime_UTR 30.0%
ATCACCAAAACTTATAGACT+GGG - Chr4:72900439-72900458 MsG0480022469.01.T01:intron 30.0%
ATTAAGCTGCTTATCAGAAT+AGG + Chr4:72901988-72902007 None:intergenic 30.0%
ATTACATGGATGTGAATTGT+GGG - Chr4:72903675-72903694 MsG0480022469.01.T01:intron 30.0%
ATTCATAACTTGAGAGATGT+CGG - Chr4:72898733-72898752 MsG0480022469.01.T01:three_prime_UTR 30.0%
ATTCTTACTTCATATAGGTG+GGG + Chr4:72903848-72903867 None:intergenic 30.0%
CAACTTTCTTAACCAAGTAA+AGG + Chr4:72899887-72899906 None:intergenic 30.0%
CAATCATTCCAAAGCATAAA+AGG + Chr4:72900470-72900489 None:intergenic 30.0%
CCATTAACTAATCTTCTTTC+TGG - Chr4:72900414-72900433 MsG0480022469.01.T01:intron 30.0%
CTACTTGTAATTATGAAGCT+AGG - Chr4:72903701-72903720 MsG0480022469.01.T01:intron 30.0%
GACTTGTAACTAATAAGCAT+TGG + Chr4:72898827-72898846 None:intergenic 30.0%
GATTCTTACTTCATATAGGT+GGG + Chr4:72903849-72903868 None:intergenic 30.0%
GGACAAGAAAAAGTTTCAAA+AGG + Chr4:72903038-72903057 None:intergenic 30.0%
GTAATTAACAAGCAAATAGG+TGG - Chr4:72900842-72900861 MsG0480022469.01.T01:intron 30.0%
GTTTAGAAATGTAGAAAAGC+TGG - Chr4:72900669-72900688 MsG0480022469.01.T01:intron 30.0%
TAATGCTGTAAACTGAATTC+TGG - Chr4:72900538-72900557 MsG0480022469.01.T01:intron 30.0%
TATCACCAAAACTTATAGAC+TGG - Chr4:72900438-72900457 MsG0480022469.01.T01:intron 30.0%
TATTACATGGATGTGAATTG+TGG - Chr4:72903674-72903693 MsG0480022469.01.T01:intron 30.0%
TCTGAGTAGACTTAAAAAAC+AGG + Chr4:72900581-72900600 None:intergenic 30.0%
TGATTCTTACTTCATATAGG+TGG + Chr4:72903850-72903869 None:intergenic 30.0%
TGTGTACACAAGTCAATATT+AGG + Chr4:72902308-72902327 None:intergenic 30.0%
TTAAGCTGCTTATCAGAATA+GGG + Chr4:72901987-72902006 None:intergenic 30.0%
TTGCAAGTTCTTTCACAAAA+TGG + Chr4:72901421-72901440 None:intergenic 30.0%
TTTGTTTATTCATCACTACC+TGG - Chr4:72902723-72902742 MsG0480022469.01.T01:intron 30.0%
! AAGTACAAAATTTTGTCGTG+TGG - Chr4:72900777-72900796 MsG0480022469.01.T01:intron 30.0%
! AGATAGATGGTTGATATTCA+TGG - Chr4:72900896-72900915 MsG0480022469.01.T01:intron 30.0%
! ATATTTGGAAGGGTTTGTTT+AGG - Chr4:72901124-72901143 MsG0480022469.01.T01:intron 30.0%
! ATGTTTGTTGACAATGAGTT+TGG - Chr4:72902828-72902847 MsG0480022469.01.T01:CDS 30.0%
! ATTTTGTGAAAGAACTTGCA+AGG - Chr4:72901420-72901439 MsG0480022469.01.T01:intron 30.0%
! CCAGAAAGAAGATTAGTTAA+TGG + Chr4:72900417-72900436 None:intergenic 30.0%
! CTCTAAAGAGATATTTGGAA+GGG - Chr4:72901114-72901133 MsG0480022469.01.T01:intron 30.0%
! GTACTTGCTTGAAATTTGTT+TGG - Chr4:72899527-72899546 MsG0480022469.01.T01:intron 30.0%
! GTATAGCTTTTCCAGAATAA+CGG - Chr4:72902890-72902909 MsG0480022469.01.T01:intron 30.0%
! GTGTAAAAATCACACGTTTT+AGG - Chr4:72900225-72900244 MsG0480022469.01.T01:intron 30.0%
! TCAATTAAGTGGTTCACTTT+TGG + Chr4:72900373-72900392 None:intergenic 30.0%
! TGGATCAACCTAATTTTAGA+TGG - Chr4:72899010-72899029 MsG0480022469.01.T01:CDS 30.0%
! TTATCCTCATGAGAGAATTT+TGG + Chr4:72903217-72903236 None:intergenic 30.0%
! TTTAGAGCTTCATAGAATCA+CGG + Chr4:72902870-72902889 None:intergenic 30.0%
! TTTTTCCTTCTCAAAAAACC+TGG + Chr4:72901730-72901749 None:intergenic 30.0%
!! GATTCACGTACTTTTAGAAA+TGG - Chr4:72899266-72899285 MsG0480022469.01.T01:intron 30.0%
!! TGGTTAAGAAAGTTGATGAA+GGG - Chr4:72899892-72899911 MsG0480022469.01.T01:CDS 30.0%
!! TGTATTTCTGAAATTAGGAG+AGG - Chr4:72899920-72899939 MsG0480022469.01.T01:CDS 30.0%
!! TTGGTTAAGAAAGTTGATGA+AGG - Chr4:72899891-72899910 MsG0480022469.01.T01:CDS 30.0%
!!! CTTTCTAGTTTTCCTTTACT+TGG - Chr4:72899872-72899891 MsG0480022469.01.T01:CDS 30.0%
!!! CTTTTATGCTTTGGAATGAT+TGG - Chr4:72900468-72900487 MsG0480022469.01.T01:intron 30.0%
!!! TGGTTTTGTAAGAGATTAAG+AGG - Chr4:72901390-72901409 MsG0480022469.01.T01:intron 30.0%
AAAGTTGTGCAATACATACC+AGG + Chr4:72902744-72902763 None:intergenic 35.0%
AAGGACATTACCATCATATG+AGG - Chr4:72902209-72902228 MsG0480022469.01.T01:intron 35.0%
AATGCAATGTATCCCAACTT+GGG - Chr4:72903624-72903643 MsG0480022469.01.T01:intron 35.0%
AATTTAGCCCAAAACACTGA+AGG - Chr4:72902545-72902564 MsG0480022469.01.T01:intron 35.0%
ACAAACTCTTACAGCTTAAG+TGG - Chr4:72901370-72901389 MsG0480022469.01.T01:intron 35.0%
ACACTAATTACTACTCTCCA+TGG + Chr4:72901011-72901030 None:intergenic 35.0%
ACTCAGACATCATAATAGGT+GGG - Chr4:72900594-72900613 MsG0480022469.01.T01:intron 35.0%
ACTTGCAACAAGGATAAAGA+GGG + Chr4:72902624-72902643 None:intergenic 35.0%
AGAGGCAACATGAATTCTAA+TGG - Chr4:72900290-72900309 MsG0480022469.01.T01:intron 35.0%
AGGACATTACCATCATATGA+GGG - Chr4:72902210-72902229 MsG0480022469.01.T01:intron 35.0%
AGGTAAAAAACACATTTCGG+CGG + Chr4:72901258-72901277 None:intergenic 35.0%
AGTCAACATATGACAAGAAG+AGG - Chr4:72898694-72898713 MsG0480022469.01.T01:three_prime_UTR 35.0%
ATAATAGGTGGGGTAATTGT+AGG - Chr4:72900605-72900624 MsG0480022469.01.T01:intron 35.0%
ATCAGAATAGGGACTTAATC+AGG + Chr4:72901976-72901995 None:intergenic 35.0%
CATACTAATGTTTCTTGAGC+AGG + Chr4:72901877-72901896 None:intergenic 35.0%
CATATGAGGGAATAGCTAAT+TGG - Chr4:72902223-72902242 MsG0480022469.01.T01:intron 35.0%
CATTGAACTAAACCGAACTT+AGG - Chr4:72901534-72901553 MsG0480022469.01.T01:intron 35.0%
CCTTCCAAATATCTCTTTAG+AGG + Chr4:72901116-72901135 None:intergenic 35.0%
CTAATCAATGACAGTTGAAC+TGG - Chr4:72901930-72901949 MsG0480022469.01.T01:intron 35.0%
CTGCTCAAGAAACATTAGTA+TGG - Chr4:72901875-72901894 MsG0480022469.01.T01:intron 35.0%
GAAGTAAGAATCACAATGGA+GGG - Chr4:72903857-72903876 MsG0480022469.01.T01:CDS 35.0%
GATAAATACTCCTACTTGCT+TGG - Chr4:72900500-72900519 MsG0480022469.01.T01:intron 35.0%
GCAATGCATTCAGTAATTTC+AGG - Chr4:72902269-72902288 MsG0480022469.01.T01:intron 35.0%
GGGAGGTAAAAAACACATTT+CGG + Chr4:72901261-72901280 None:intergenic 35.0%
GTCAACATATGACAAGAAGA+GGG - Chr4:72898695-72898714 MsG0480022469.01.T01:three_prime_UTR 35.0%
GTCTACTCAGACATCATAAT+AGG - Chr4:72900590-72900609 MsG0480022469.01.T01:intron 35.0%
TAAACAAATTGCCCATGATC+TGG + Chr4:72902711-72902730 None:intergenic 35.0%
TAAGCCAAAATTCTCTCATG+AGG - Chr4:72903210-72903229 MsG0480022469.01.T01:intron 35.0%
TAAGGGTGAAAAAATGTAGG+GGG + Chr4:72901281-72901300 None:intergenic 35.0%
TAATGCAATGTATCCCAACT+TGG - Chr4:72903623-72903642 MsG0480022469.01.T01:intron 35.0%
TACTCAGACATCATAATAGG+TGG - Chr4:72900593-72900612 MsG0480022469.01.T01:intron 35.0%
TCAACATATGACAAGAAGAG+GGG - Chr4:72898696-72898715 MsG0480022469.01.T01:three_prime_UTR 35.0%
TGAAACGAAACAGAAACGTA+CGG + Chr4:72899481-72899500 None:intergenic 35.0%
TGAAGTAAGAATCACAATGG+AGG - Chr4:72903856-72903875 MsG0480022469.01.T01:CDS 35.0%
TGAGTTTGGCAAAATCAAAG+TGG - Chr4:72902842-72902861 MsG0480022469.01.T01:intron 35.0%
TGCAAGTCAAGTGATCATTA+TGG - Chr4:72902637-72902656 MsG0480022469.01.T01:intron 35.0%
TTAGCTATTCCCTCATATGA+TGG + Chr4:72902222-72902241 None:intergenic 35.0%
TTGATTAGGAAGGGAGTTTA+CGG + Chr4:72901918-72901937 None:intergenic 35.0%
! ACCTTGCAAATCAAAGTGTT+TGG + Chr4:72901842-72901861 None:intergenic 35.0%
! ACTTTCTACCTTCAGTGTTT+TGG + Chr4:72902556-72902575 None:intergenic 35.0%
! CAACTGTCATTGATTAGGAA+GGG + Chr4:72901927-72901946 None:intergenic 35.0%
! CAGTTCAACTGTCATTGATT+AGG + Chr4:72901932-72901951 None:intergenic 35.0%
! CCTCTAAAGAGATATTTGGA+AGG - Chr4:72901113-72901132 MsG0480022469.01.T01:intron 35.0%
! CCTTGCAAATCAAAGTGTTT+GGG + Chr4:72901841-72901860 None:intergenic 35.0%
! CTTGCAAATCAAAGTGTTTG+GGG + Chr4:72901840-72901859 None:intergenic 35.0%
! CTTTCTACCTTCAGTGTTTT+GGG + Chr4:72902555-72902574 None:intergenic 35.0%
! GCAGTTGAAGGAGAAATTTT+TGG - Chr4:72900698-72900717 MsG0480022469.01.T01:intron 35.0%
! TCAACTGTCATTGATTAGGA+AGG + Chr4:72901928-72901947 None:intergenic 35.0%
!! AGTTATTATGGAGAGTGTTC+TGG - Chr4:72902101-72902120 MsG0480022469.01.T01:intron 35.0%
!! ATGGACTAGCCAACAAAAAT+TGG + Chr4:72901622-72901641 None:intergenic 35.0%
!! ATTGATTTTGGCATGTTTGG+AGG + Chr4:72900320-72900339 None:intergenic 35.0%
!! TAACACAAAAGCACCATGTT+TGG - Chr4:72899140-72899159 MsG0480022469.01.T01:intron 35.0%
!! TAAGTGTGTGTTTGGTTCTA+AGG - Chr4:72900107-72900126 MsG0480022469.01.T01:intron 35.0%
!! TTCAGTGTTTTGGGCTAAAT+TGG + Chr4:72902546-72902565 None:intergenic 35.0%
!!! GAAATTTTTGGCTTTACCAC+TGG - Chr4:72900710-72900729 MsG0480022469.01.T01:intron 35.0%
AAACGAAACAGAAACGTACG+GGG + Chr4:72899479-72899498 None:intergenic 40.0%
AACTAAGTGCAGATGTCAAC+CGG - Chr4:72900943-72900962 MsG0480022469.01.T01:intron 40.0%
AAGGTTCAGATGATTCACAC+CGG - Chr4:72900967-72900986 MsG0480022469.01.T01:intron 40.0%
AATACACTTCCTCCCAAGTT+GGG + Chr4:72903639-72903658 None:intergenic 40.0%
AATGTTTCTTGAGCAGGTGA+CGG + Chr4:72901871-72901890 None:intergenic 40.0%
ACGGTTAAATCGCAGATAGA+TGG - Chr4:72900883-72900902 MsG0480022469.01.T01:intron 40.0%
AGAACACAAAGGTCTGTGAT+TGG - Chr4:72902127-72902146 MsG0480022469.01.T01:intron 40.0%
AGAATAGGGACTTAATCAGG+AGG + Chr4:72901973-72901992 None:intergenic 40.0%
AGATCTTGAGCTGATAGCTA+TGG - Chr4:72899641-72899660 MsG0480022469.01.T01:intron 40.0%
AGGAGGGACATTGAAGATAT+AGG + Chr4:72901956-72901975 None:intergenic 40.0%
CCAAAAAACAGAAACTGGTC+TGG - Chr4:72901034-72901053 MsG0480022469.01.T01:intron 40.0%
CGACTCTCATTATCACACAA+TGG + Chr4:72898788-72898807 None:intergenic 40.0%
CTCAGACATCATAATAGGTG+GGG - Chr4:72900595-72900614 MsG0480022469.01.T01:intron 40.0%
GAAACGAAACAGAAACGTAC+GGG + Chr4:72899480-72899499 None:intergenic 40.0%
GAACACAAAGGTCTGTGATT+GGG - Chr4:72902128-72902147 MsG0480022469.01.T01:intron 40.0%
GAATAGGGACTTAATCAGGA+GGG + Chr4:72901972-72901991 None:intergenic 40.0%
GAATCATCGTCATCCAAACA+TGG + Chr4:72899156-72899175 None:intergenic 40.0%
GACTTGCAACAAGGATAAAG+AGG + Chr4:72902625-72902644 None:intergenic 40.0%
GAGGAACAAAACAAGCAGAA+AGG - Chr4:72903261-72903280 MsG0480022469.01.T01:intron 40.0%
GAGGACTTGAAGCAACAATA+AGG + Chr4:72900012-72900031 None:intergenic 40.0%
GCAGCTTTCATTGTTCTTAC+AGG - Chr4:72903497-72903516 MsG0480022469.01.T01:intron 40.0%
GCATGTTTATATTGGCGTCA+AGG - Chr4:72898758-72898777 MsG0480022469.01.T01:three_prime_UTR 40.0%
GGTAAAAAACACATTTCGGC+GGG + Chr4:72901257-72901276 None:intergenic 40.0%
GGTCCAAAACCGATTAATCT+GGG + Chr4:72901702-72901721 None:intergenic 40.0%
GTAAAAAACACATTTCGGCG+GGG + Chr4:72901256-72901275 None:intergenic 40.0%
GTATTTGCTTGCATTGCATG+TGG + Chr4:72899111-72899130 None:intergenic 40.0%
GTCCAAAACCGATTAATCTG+GGG + Chr4:72901701-72901720 None:intergenic 40.0%
GTGTGCCAAAAAACAGAAAC+TGG - Chr4:72901029-72901048 MsG0480022469.01.T01:intron 40.0%
TAAAAAACACATTTCGGCGG+GGG + Chr4:72901255-72901274 None:intergenic 40.0%
TAACTAGATGCTTGTGCTGT+GGG - Chr4:72902663-72902682 MsG0480022469.01.T01:intron 40.0%
TAAGAATCACAATGGAGGGT+AGG - Chr4:72903861-72903880 MsG0480022469.01.T01:CDS 40.0%
TAATACACTTCCTCCCAAGT+TGG + Chr4:72903640-72903659 None:intergenic 40.0%
TAGCCAACAAAAATTGGCAC+CGG + Chr4:72901616-72901635 None:intergenic 40.0%
TATGACAAGAAGAGGGGTTA+AGG - Chr4:72898702-72898721 MsG0480022469.01.T01:three_prime_UTR 40.0%
TATGGCTTCTTCTCTGTTAC+TGG - Chr4:72899659-72899678 MsG0480022469.01.T01:intron 40.0%
TCATGTCAAACCTTGAGGAA+AGG - Chr4:72903458-72903477 MsG0480022469.01.T01:intron 40.0%
TCCAAAACCGATTAATCTGG+GGG + Chr4:72901700-72901719 None:intergenic 40.0%
TCCAAATACTCCTTTCCTCA+AGG + Chr4:72903471-72903490 None:intergenic 40.0%
TCTGTGATTGTTGTCTGACA+AGG - Chr4:72902190-72902209 MsG0480022469.01.T01:intron 40.0%
TGTTTGTGATGTTGATGCTC+AGG - Chr4:72903339-72903358 MsG0480022469.01.T01:intron 40.0%
TTACTTTGCCTATAGTTGGG+TGG - Chr4:72902342-72902361 MsG0480022469.01.T01:intron 40.0%
TTCCTCAAGGTTTGACATGA+AGG + Chr4:72903458-72903477 None:intergenic 40.0%
TTCTCAAAAAACCTGGTACC+CGG + Chr4:72901723-72901742 None:intergenic 40.0%
! CAATACAGCATTTTCCTGCA+TGG - Chr4:72902420-72902439 MsG0480022469.01.T01:intron 40.0%
! GCATCCCAGTCTATAAGTTT+TGG + Chr4:72900446-72900465 None:intergenic 40.0%
! GCTTGAAATTTGTTTGGACC+AGG - Chr4:72899533-72899552 MsG0480022469.01.T01:intron 40.0%
! TGTCGGAGGCATGTTTATAT+TGG - Chr4:72898750-72898769 MsG0480022469.01.T01:three_prime_UTR 40.0%
! TGTTCTGGTCTAGAACACAA+AGG - Chr4:72902116-72902135 MsG0480022469.01.T01:intron 40.0%
! TTCTTCTCTGTTACTGGTTG+TGG - Chr4:72899665-72899684 MsG0480022469.01.T01:intron 40.0%
!! ACCTTGAGGAAAGGAGTATT+TGG - Chr4:72903467-72903486 MsG0480022469.01.T01:intron 40.0%
!! CCCAAACACTTTGATTTGCA+AGG - Chr4:72901838-72901857 MsG0480022469.01.T01:intron 40.0%
!! TGATCACTTGACTTGCAACA+AGG + Chr4:72902634-72902653 None:intergenic 40.0%
!! TGGTTCACTTTTGGAAGAGT+CGG + Chr4:72900364-72900383 None:intergenic 40.0%
!!! AGATTAATCGGTTTTGGACC+GGG - Chr4:72901702-72901721 MsG0480022469.01.T01:intron 40.0%
!!! ATCACACGTTTTAGGGCAAA+AGG - Chr4:72900233-72900252 MsG0480022469.01.T01:intron 40.0%
!!! CAGATTAATCGGTTTTGGAC+CGG - Chr4:72901701-72901720 MsG0480022469.01.T01:intron 40.0%
!!! CCAGACCAGTTTCTGTTTTT+TGG + Chr4:72901037-72901056 None:intergenic 40.0%
AACTTTGCCGTGGCTTCAAT+TGG - Chr4:72901646-72901665 MsG0480022469.01.T01:intron 45.0%
AATCACAATGGAGGGTAGGA+TGG - Chr4:72903865-72903884 MsG0480022469.01.T01:CDS 45.0%
ACACCTGTGTCTCTAGCATA+GGG + Chr4:72903581-72903600 None:intergenic 45.0%
ACTTTGCCGTGGCTTCAATT+GGG - Chr4:72901647-72901666 MsG0480022469.01.T01:intron 45.0%
AGCCAACAAAAATTGGCACC+GGG + Chr4:72901615-72901634 None:intergenic 45.0%
AGCTGGATATAGGCAGTTGA+AGG - Chr4:72900686-72900705 MsG0480022469.01.T01:intron 45.0%
AGGAGACGACAACGAAGTAA+GGG - Chr4:72898644-72898663 MsG0480022469.01.T01:three_prime_UTR 45.0%
CACCTTCATGTCAAACCTTG+AGG - Chr4:72903453-72903472 MsG0480022469.01.T01:intron 45.0%
CATAACTTGAGAGATGTCGG+AGG - Chr4:72898736-72898755 MsG0480022469.01.T01:three_prime_UTR 45.0%
CCAAAACCGATTAATCTGGG+GGG + Chr4:72901699-72901718 None:intergenic 45.0%
CCAACACAAAGTGAGGTTTG+AGG + Chr4:72898993-72899012 None:intergenic 45.0%
CCTCAAACCTCACTTTGTGT+TGG - Chr4:72898990-72899009 MsG0480022469.01.T01:CDS 45.0%
CGGTCCAAAACCGATTAATC+TGG + Chr4:72901703-72901722 None:intergenic 45.0%
GATCCTATATCAAAGCGCAG+AGG + Chr4:72903016-72903035 None:intergenic 45.0%
GCTACATGTACAAGAGCAAC+CGG + Chr4:72900989-72901008 None:intergenic 45.0%
GGTTGATCCAACACAAAGTG+AGG + Chr4:72899000-72899019 None:intergenic 45.0%
GTAACTAGATGCTTGTGCTG+TGG - Chr4:72902662-72902681 MsG0480022469.01.T01:intron 45.0%
GTGAATCATCTGAACCTTGC+CGG + Chr4:72900965-72900984 None:intergenic 45.0%
TAAGCACACACCAAGCAAGT+AGG + Chr4:72900513-72900532 None:intergenic 45.0%
TGCTCTTGTACATGTAGCCA+TGG - Chr4:72900991-72901010 MsG0480022469.01.T01:intron 45.0%
TGGGGATTGCAACAACAAAC+TGG + Chr4:72901822-72901841 None:intergenic 45.0%
TTGCCTATAGTTGGGTGGAT+GGG - Chr4:72902347-72902366 MsG0480022469.01.T01:intron 45.0%
TTTGCCTATAGTTGGGTGGA+TGG - Chr4:72902346-72902365 MsG0480022469.01.T01:intron 45.0%
TTTGCTTGCATTGCATGTGG+AGG + Chr4:72899108-72899127 None:intergenic 45.0%
! ACAGCATTTTCCTGCATGGT+AGG - Chr4:72902424-72902443 MsG0480022469.01.T01:intron 45.0%
! ACCTAGTGGATCCAGATCAT+GGG - Chr4:72902697-72902716 MsG0480022469.01.T01:intron 45.0%
! ATTTTCCTGCATGGTAGGCA+CGG - Chr4:72902429-72902448 MsG0480022469.01.T01:intron 45.0%
! GAAAGAACTTGCAAGGCACT+AGG - Chr4:72901427-72901446 MsG0480022469.01.T01:intron 45.0%
! GATTAGCCCCCCAGATTAAT+CGG - Chr4:72901690-72901709 MsG0480022469.01.T01:intron 45.0%
! GGGATGCACCTTTTATGCTT+TGG - Chr4:72900459-72900478 MsG0480022469.01.T01:intron 45.0%
!! AGGAAAGGAGTATTTGGAGC+TGG - Chr4:72903473-72903492 MsG0480022469.01.T01:intron 45.0%
!! GTGTGTGTTTGGTTCTAAGG+TGG - Chr4:72900110-72900129 MsG0480022469.01.T01:intron 45.0%
!!! GGGTACCAGGTTTTTTGAGA+AGG - Chr4:72901722-72901741 MsG0480022469.01.T01:intron 45.0%
!! TTAAAAAAAAAACATAATTA+CGG + Chr4:72903121-72903140 None:intergenic 5.0%
ACGACGAGTAGCCGTTATTC+TGG + Chr4:72902904-72902923 None:intergenic 50.0%
CACACCTGTGTCTCTAGCAT+AGG + Chr4:72903582-72903601 None:intergenic 50.0%
CCACCTCTGCGCTTTGATAT+AGG - Chr4:72903010-72903029 MsG0480022469.01.T01:intron 50.0%
CCTATATCAAAGCGCAGAGG+TGG + Chr4:72903013-72903032 None:intergenic 50.0%
CTGTGTCTCTAGCATAGGGA+GGG + Chr4:72903577-72903596 None:intergenic 50.0%
GAGGAGACGACAACGAAGTA+AGG - Chr4:72898643-72898662 MsG0480022469.01.T01:three_prime_UTR 50.0%
GCAATGTATCCCAACTTGGG+AGG - Chr4:72903627-72903646 MsG0480022469.01.T01:intron 50.0%
GGAGACGACAACGAAGTAAG+GGG - Chr4:72898645-72898664 MsG0480022469.01.T01:three_prime_UTR 50.0%
GGGTGAAAAAATGTAGGGGG+AGG + Chr4:72901278-72901297 None:intergenic 50.0%
GTCGTCTCCTCCTCAGATTT+CGG + Chr4:72898634-72898653 None:intergenic 50.0%
TAAAGAGGGACCCAACACCT+AGG + Chr4:72902610-72902629 None:intergenic 50.0%
TATCAAAGCGCAGAGGTGGT+AGG + Chr4:72903009-72903028 None:intergenic 50.0%
TCTGGATCCACTAGGTCTCA+TGG + Chr4:72902693-72902712 None:intergenic 50.0%
TGCTGCGTCATGTCTTCTAG+CGG - Chr4:72903376-72903395 MsG0480022469.01.T01:intron 50.0%
! GACCTAGTGGATCCAGATCA+TGG - Chr4:72902696-72902715 MsG0480022469.01.T01:intron 50.0%
!! CCCCCCAGATTAATCGGTTT+TGG - Chr4:72901696-72901715 MsG0480022469.01.T01:intron 50.0%
!! CTCCCGGTGCCAATTTTTGT+TGG - Chr4:72901610-72901629 MsG0480022469.01.T01:intron 50.0%
AAAACACATTTCGGCGGGGG+TGG + Chr4:72901252-72901271 None:intergenic 55.0%
AAACACATTTCGGCGGGGGT+GGG + Chr4:72901251-72901270 None:intergenic 55.0%
AGCCACGGCAAAGTTCTGCA+TGG + Chr4:72901641-72901660 None:intergenic 55.0%
AGTGCAGATGTCAACCGGCA+AGG - Chr4:72900948-72900967 MsG0480022469.01.T01:intron 55.0%
CCTCCCTATGCTAGAGACAC+AGG - Chr4:72903575-72903594 MsG0480022469.01.T01:intron 55.0%
CCTGTGTCTCTAGCATAGGG+AGG + Chr4:72903578-72903597 None:intergenic 55.0%
CTAATCCCCTGTCCACTAGC+GGG + Chr4:72901676-72901695 None:intergenic 55.0%
CTCGGAGCAATGATCTCCAG+TGG + Chr4:72900729-72900748 None:intergenic 55.0%
CTGTTGCTGCTGAGCAGAGA+AGG - Chr4:72899721-72899740 MsG0480022469.01.T01:intron 55.0%
GCCCATGATCTGGATCCACT+AGG + Chr4:72902701-72902720 None:intergenic 55.0%
GCTAATCCCCTGTCCACTAG+CGG + Chr4:72901677-72901696 None:intergenic 55.0%
GCTGCGTCATGTCTTCTAGC+GGG - Chr4:72903377-72903396 MsG0480022469.01.T01:intron 55.0%
GGACCCATCCACCCAACTAT+AGG + Chr4:72902353-72902372 None:intergenic 55.0%
GTCCATGCAGAACTTTGCCG+TGG - Chr4:72901636-72901655 MsG0480022469.01.T01:intron 55.0%
TAATCCCCTGTCCACTAGCG+GGG + Chr4:72901675-72901694 None:intergenic 55.0%
AACACATTTCGGCGGGGGTG+GGG + Chr4:72901250-72901269 None:intergenic 60.0%
AATCCCCTGTCCACTAGCGG+GGG + Chr4:72901674-72901693 None:intergenic 60.0%
CAACTCCGTGCCTACCATGC+AGG + Chr4:72902437-72902456 None:intergenic 60.0%
GGGAGAGCCATGAGACCTAG+TGG - Chr4:72902683-72902702 MsG0480022469.01.T01:intron 60.0%
GTGGTGGCCGAAATCTGAGG+AGG - Chr4:72898624-72898643 MsG0480022469.01.T01:three_prime_UTR 60.0%
TCGGCCACCACCTCCATCAA+CGG + Chr4:72898615-72898634 None:intergenic 60.0%
! ATGAGGTGCCCCGTTGATGG+AGG - Chr4:72898602-72898621 MsG0480022469.01.T01:three_prime_UTR 60.0%
! GAGGTGGTGGCCGAAATCTG+AGG - Chr4:72898621-72898640 MsG0480022469.01.T01:three_prime_UTR 60.0%
!!! TCGGTTTTGGACCGGGTACC+AGG - Chr4:72901709-72901728 MsG0480022469.01.T01:intron 60.0%
ATCCCCTGTCCACTAGCGGG+GGG + Chr4:72901673-72901692 None:intergenic 65.0%
CGGCCACCACCTCCATCAAC+GGG + Chr4:72898614-72898633 None:intergenic 65.0%
GAGGGACCCAACACCTAGGC+CGG + Chr4:72902606-72902625 None:intergenic 65.0%
GGCCACCACCTCCATCAACG+GGG + Chr4:72898613-72898632 None:intergenic 65.0%
GGGGGGCCCAATTGAAGCCA+CGG + Chr4:72901656-72901675 None:intergenic 65.0%
TCAATTGGGCCCCCCGCTAG+TGG - Chr4:72901661-72901680 MsG0480022469.01.T01:intron 65.0%
! AGGTGCCCCGTTGATGGAGG+TGG - Chr4:72898605-72898624 MsG0480022469.01.T01:three_prime_UTR 65.0%
! TGCCCCGTTGATGGAGGTGG+TGG - Chr4:72898608-72898627 MsG0480022469.01.T01:three_prime_UTR 65.0%
ACATTTCGGCGGGGGTGGGG+AGG + Chr4:72901247-72901266 None:intergenic 70.0%
CGGGGGTGGGGAGGAGTCTT+TGG + Chr4:72901238-72901257 None:intergenic 70.0%
! GGCCCCCCGCTAGTGGACAG+GGG - Chr4:72901668-72901687 MsG0480022469.01.T01:intron 75.0%
! GGGCCCCCCGCTAGTGGACA+GGG - Chr4:72901667-72901686 MsG0480022469.01.T01:intron 75.0%
! TGGGCCCCCCGCTAGTGGAC+AGG - Chr4:72901666-72901685 MsG0480022469.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 72898602 72903895 72898602 ID=MsG0480022469.01;Name=MsG0480022469.01
Chr4 mRNA 72898602 72903895 72898602 ID=MsG0480022469.01.T01;Parent=MsG0480022469.01;Name=MsG0480022469.01.T01;_AED=0.49;_eAED=0.53;_QI=0|0.66|0.75|1|1|1|4|276|208
Chr4 exon 72898602 72899136 72898602 ID=MsG0480022469.01.T01:exon:10205;Parent=MsG0480022469.01.T01
Chr4 exon 72899753 72899955 72899753 ID=MsG0480022469.01.T01:exon:10204;Parent=MsG0480022469.01.T01
Chr4 exon 72902748 72902854 72902748 ID=MsG0480022469.01.T01:exon:10203;Parent=MsG0480022469.01.T01
Chr4 exon 72903838 72903895 72903838 ID=MsG0480022469.01.T01:exon:10202;Parent=MsG0480022469.01.T01
Chr4 CDS 72903838 72903895 72903838 ID=MsG0480022469.01.T01:cds;Parent=MsG0480022469.01.T01
Chr4 CDS 72902748 72902854 72902748 ID=MsG0480022469.01.T01:cds;Parent=MsG0480022469.01.T01
Chr4 CDS 72899753 72899955 72899753 ID=MsG0480022469.01.T01:cds;Parent=MsG0480022469.01.T01
Chr4 CDS 72898878 72899136 72898878 ID=MsG0480022469.01.T01:cds;Parent=MsG0480022469.01.T01
Chr4 three_prime_UTR 72898602 72898877 72898602 ID=MsG0480022469.01.T01:three_prime_utr;Parent=MsG0480022469.01.T01
Gene Sequence

>MsG0480022469.01.T01

ATGAGGTGCCCCGTTGATGGAGGTGGTGGCCGAAATCTGAGGAGGAGACGACAACGAAATCTTGAGCTGATAGCTATGGCTTCTTCTCTGTTACTGGTTGTGGTGTTTGTGTTTGATCTTATTGCTTTTGCTCTTGCTGTTGCTGCTGAGCAGAGAAGGAGTTCTGCCAATTTAGCCCAAAACACTGAAGGTAGAAAGTATTGTCAATATGATTCTGACATTGCCACCGGCCTAGGTGTTGGGTCCCTCTTTATCCTTGTTGCAAGTCAAGTGATCATTATGGTTGTAACTAGATGCTTGTGCTGTGGGAGAGCCATGAGACCTAGTGGATCCAGATCATGGGCAATTTGTTTATTCATCACTACCTGGTTGACATTTCTTATTGCTGCGTCATGTCTTCTAGCGGGTTCAGTGAAAAATGCTTACCACACAAAGTATAGAGATTTATTGGGAGATAGAGCACCTTCATGTCAAACCTTGAGGAAAGGAGTATTTGGAGCTGGAGCAGCTTTCATTGTTCTTACAGGAATAGTCTCTGAGCTTTACTATGTTAGTTTTTCAAAAGCTAATAATGGTGGAGTCCCTCCCTATGCTAGAGACACAGGTGTGACCATGAGTAATCTGTAA
Protein sequence

>MsG0480022469.01.T01

MRCPVDGGGGRNLRRRRQRNLELIAMASSLLLVVVFVFDLIAFALAVAAEQRRSSANLAQNTEGRKYCQYDSDIATGLGVGSLFILVASQVIIMVVTRCLCCGRAMRPSGSRSWAICLFITTWLTFLIAASCLLAGSVKNAYHTKYRDLLGDRAPSCQTLRKGVFGAGAAFIVLTGIVSELYYVSFSKANNGGVPPYARDTGVTMSNL*