AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380012054.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012054.01.T01 MTR_3g012500 88.444 675 65 3 24 697 1 663 0.0 1191
MsG0380012054.01.T01 MTR_3g012490 47.401 654 228 20 139 697 1 633 6.06e-156 465
MsG0380012054.01.T01 MTR_3g098590 55.814 129 57 0 342 470 16 144 6.89e-46 171
MsG0380012054.01.T01 MTR_4g084080 44.800 125 66 1 346 467 19 143 2.51e-26 116
MsG0380012054.01.T01 MTR_2g067150 40.000 125 72 1 346 467 161 285 1.14e-19 94.0
MsG0380012054.01.T01 MTR_2g066940 40.000 125 72 1 346 467 123 247 1.18e-19 93.6
MsG0380012054.01.T01 MTR_7g070320 33.333 144 90 1 342 479 31 174 3.85e-18 89.4
MsG0380012054.01.T01 MTR_1g018690 34.091 132 80 1 343 467 36 167 4.91e-17 82.8
MsG0380012054.01.T01 MTR_4g013760 33.333 132 81 1 343 467 36 167 3.38e-16 80.1
MsG0380012054.01.T01 MTR_8g099685 34.074 135 80 3 340 467 175 307 2.70e-15 78.2
MsG0380012054.01.T01 MTR_8g099685 35.156 128 74 3 340 460 175 300 1.11e-14 75.9
MsG0380012054.01.T01 MTR_7g029130 33.571 140 84 3 340 472 163 300 1.90e-14 75.1
MsG0380012054.01.T01 MTR_3g081090 33.333 135 81 3 340 467 184 316 1.92e-14 75.5
MsG0380012054.01.T01 MTR_3g081090 34.375 128 75 3 340 460 184 309 3.93e-14 74.3
MsG0380012054.01.T01 MTR_7g070350 30.827 133 86 1 342 468 25 157 9.21e-14 73.9
MsG0380012054.01.T01 MTR_3g081090 35.955 89 50 1 340 421 184 272 2.82e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012054.01.T01 AT2G32910 41.192 386 169 15 343 690 318 683 7.36e-59 211
MsG0380012054.01.T01 AT5G61910 52.740 146 67 2 324 468 40 184 6.34e-40 157
MsG0380012054.01.T01 AT5G61910 52.740 146 67 2 324 468 40 184 6.34e-40 157
MsG0380012054.01.T01 AT5G61910 52.740 146 67 2 324 468 44 188 6.79e-40 157
MsG0380012054.01.T01 AT5G61910 52.740 146 67 2 324 468 40 184 7.62e-40 157
MsG0380012054.01.T01 AT5G61910 52.740 146 67 2 324 468 40 184 4.07e-38 153
MsG0380012054.01.T01 AT2G35140 39.200 125 73 1 346 467 23 147 3.29e-20 96.3
MsG0380012054.01.T01 AT2G35140 39.200 125 73 1 346 467 23 147 3.29e-20 96.3
MsG0380012054.01.T01 AT2G35140 39.200 125 73 1 346 467 23 147 3.29e-20 96.3
MsG0380012054.01.T01 AT2G35140 39.200 125 73 1 346 467 23 147 3.29e-20 96.3
MsG0380012054.01.T01 AT2G35140 39.200 125 73 1 346 467 23 147 3.29e-20 96.3
MsG0380012054.01.T01 AT2G35140 39.200 125 73 1 346 467 49 173 4.00e-20 95.9
MsG0380012054.01.T01 AT3G11000 34.091 132 81 1 344 469 11 142 4.62e-18 88.2
MsG0380012054.01.T01 AT3G11000 34.532 139 84 2 337 469 124 261 6.83e-17 85.1
MsG0380012054.01.T01 AT5G01660 34.351 131 80 1 343 467 17 147 1.75e-16 83.6
MsG0380012054.01.T01 AT5G01660 34.351 131 80 1 343 467 17 147 3.68e-16 82.8
MsG0380012054.01.T01 AT5G01660 34.351 131 80 1 343 467 17 147 3.68e-16 82.8
MsG0380012054.01.T01 AT5G42050 36.296 135 77 3 340 467 212 344 5.53e-16 80.5
MsG0380012054.01.T01 AT3G27090 31.429 140 87 3 340 472 158 295 2.33e-12 68.9
MsG0380012054.01.T01 AT3G27090 31.429 140 87 3 340 472 158 295 2.33e-12 68.9
MsG0380012054.01.T01 AT3G27090 31.429 140 87 3 340 472 158 295 2.33e-12 68.9

Find 172 sgRNAs with CRISPR-Local

Find 400 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACGGTCATTCAAATAAA+TGG 0.124768 3:+10207907 None:intergenic
CTTTCTTGAATTATTGCTTT+TGG 0.198180 3:+10208196 None:intergenic
CTTCTCATGTTAATCCTATA+AGG 0.213380 3:-10208021 MsG0380012054.01.T01:CDS
CTCTCATAAGGTTCCCTTAT+AGG 0.216544 3:+10208007 None:intergenic
TCCCCATGATTCATTTCTTT+TGG 0.220797 3:-10208086 MsG0380012054.01.T01:CDS
GTTTACAAGGCTTCATCTTC+TGG 0.233330 3:-10208623 MsG0380012054.01.T01:CDS
GAAAGGTGAAGCTCAGAATT+TGG 0.233482 3:-10211738 MsG0380012054.01.T01:five_prime_UTR
CGTCCTTAGTTTCATTCTGC+TGG 0.267103 3:+10209068 None:intergenic
GGGTGTTTCATCTGCTAAAA+AGG 0.271160 3:-10208717 MsG0380012054.01.T01:CDS
GAAGCACAAGGAGTCAAATA+AGG 0.272385 3:-10208882 MsG0380012054.01.T01:CDS
CATCGCTCCCAGCTCGTATT+TGG 0.301431 3:-10207777 MsG0380012054.01.T01:CDS
TTTAATCTGAAGCTGCTATA+TGG 0.309125 3:-10208647 MsG0380012054.01.T01:CDS
CCCGATATGGCTGCACTTGA+TGG 0.310834 3:+10207651 None:intergenic
AAGCTTGAACCCCAAGCTTT+TGG 0.312897 3:-10208593 MsG0380012054.01.T01:CDS
TGATCGATGTTATGAGGATT+AGG 0.312915 3:+10209451 None:intergenic
CTCCCAGCTCGTATTTGGTT+GGG 0.320824 3:-10207772 MsG0380012054.01.T01:CDS
GCGATGGCCTCTCTACTTAA+AGG 0.323048 3:+10207794 None:intergenic
TTCTTCTTGGCCTTAAGTTT+AGG 0.327881 3:+10209202 None:intergenic
TTAGGATTAGAAGAAAATTC+AGG 0.330730 3:+10209469 None:intergenic
TTAGGATTAGAAGAAAATTC+AGG 0.331140 3:+10209358 None:intergenic
ATTGGAGACCGAGCATAATA+TGG 0.332100 3:-10209761 MsG0380012054.01.T01:CDS
AGGAGTCAAATAAGGGTTCT+AGG 0.356624 3:-10208874 MsG0380012054.01.T01:CDS
TCCAACTTGTCTCCCCGATA+TGG 0.359947 3:+10207638 None:intergenic
TGCTAAGTATCTGCATAGTA+TGG 0.360145 3:-10209830 MsG0380012054.01.T01:exon
CTCAATGAAGAAATGTTATT+CGG 0.370457 3:+10207434 None:intergenic
CCATCAAGTGCAGCCATATC+GGG 0.373653 3:-10207651 MsG0380012054.01.T01:CDS
AGGCATAACGATCATCTATA+TGG 0.375161 3:+10207855 None:intergenic
TTCATCTAGGGATGCATACT+TGG 0.377709 3:-10207819 MsG0380012054.01.T01:CDS
ACCATCAAGTGCAGCCATAT+CGG 0.380439 3:-10207652 MsG0380012054.01.T01:CDS
TTGAAAATGCTTTCCGGTAG+CGG 0.386260 3:+10208435 None:intergenic
GATCGTTATGCCTATCGATA+TGG 0.392738 3:-10207845 MsG0380012054.01.T01:CDS
TCTTCTTGATCGATGTTATG+AGG 0.392953 3:+10209445 None:intergenic
AAACTTGCCACCAAAAGCTT+GGG 0.395162 3:+10208583 None:intergenic
TTCTGATTCTTTCCCGCTAC+CGG 0.398472 3:-10208448 MsG0380012054.01.T01:CDS
ATCTCTGGTTCCTAAACTTA+AGG 0.404846 3:-10209212 MsG0380012054.01.T01:CDS
GGCTGCACTTGATGGTAATC+AGG 0.406996 3:+10207659 None:intergenic
CGAAGACTTTCAACATGAAC+GGG 0.412432 3:+10207938 None:intergenic
TGATCAAGAAGAGAGCAAAT+TGG 0.415472 3:-10209779 MsG0380012054.01.T01:CDS
AGAAAGGGAGGCTCCGGGTC+GGG 0.416722 3:-10208179 MsG0380012054.01.T01:CDS
ATTATTCTCAGTGCCAATCT+TGG 0.418563 3:+10209726 None:intergenic
TCTGGTTTACCAGATCCTTC+AGG 0.429526 3:+10209289 None:intergenic
TCCCAGCTCGTATTTGGTTG+GGG 0.430175 3:-10207771 MsG0380012054.01.T01:CDS
ATCGATATGGTGCTTCATCT+AGG 0.431246 3:-10207832 MsG0380012054.01.T01:CDS
TTCTCATGTTAATCCTATAA+GGG 0.432079 3:-10208020 MsG0380012054.01.T01:CDS
CACTGAGAATAATGTGGATC+AGG 0.437810 3:-10209716 MsG0380012054.01.T01:CDS
AATTCAAGAAAGGGAGGCTC+CGG 0.439056 3:-10208185 MsG0380012054.01.T01:CDS
GTCCTTAGTTTCATTCTGCT+GGG 0.445967 3:+10209069 None:intergenic
GCTCCCAGCTCGTATTTGGT+TGG 0.447102 3:-10207773 MsG0380012054.01.T01:CDS
TCATCTCGTTACTCTTTCGC+TGG 0.447405 3:-10207596 MsG0380012054.01.T01:CDS
CATAAATGCTTAGGTAACTC+TGG 0.447562 3:-10207460 MsG0380012054.01.T01:three_prime_UTR
GAAACTTGCCACCAAAAGCT+TGG 0.450801 3:+10208582 None:intergenic
TCTCCAAAAGAAATGAATCA+TGG 0.454749 3:+10208083 None:intergenic
GGAGAGAGATCGTTGAAGAT+AGG 0.455533 3:-10207715 MsG0380012054.01.T01:CDS
TGAAAATGCTTTCCGGTAGC+GGG 0.460509 3:+10208436 None:intergenic
CAAAAGCAATAATTCAAGAA+AGG 0.463144 3:-10208195 MsG0380012054.01.T01:CDS
TATTCATAATCTCTCTCATA+AGG 0.464732 3:+10207995 None:intergenic
AAGTGAAGGTAAGTCAGAAT+AGG 0.466413 3:-10209006 MsG0380012054.01.T01:CDS
TTTAAATGCTGTTTAATGTA+CGG 0.467656 3:-10207411 MsG0380012054.01.T01:three_prime_UTR
GTATCTGCATAGTATGGATC+AGG 0.468899 3:-10209824 MsG0380012054.01.T01:exon
TGGTGGCAAGTTTCCTGCCC+AGG 0.469476 3:-10208573 MsG0380012054.01.T01:intron
GCCATATCGGGGAGACAAGT+TGG 0.470207 3:-10207639 MsG0380012054.01.T01:CDS
TCTATGAATCATAAATGCTT+AGG 0.473948 3:-10207469 MsG0380012054.01.T01:three_prime_UTR
AACATGCAATTTGAATCCCT+TGG 0.474513 3:-10207547 MsG0380012054.01.T01:three_prime_UTR
TTGTTTCCGCTATCGTGTCA+TGG 0.475889 3:-10208738 MsG0380012054.01.T01:CDS
TCTTTCTTCTGTCCTTCCAC+CGG 0.476731 3:-10213793 MsG0380012054.01.T01:five_prime_UTR
ACACGATAGCGGAAACAATC+AGG 0.480874 3:+10208743 None:intergenic
GTTATGCTCAGTGGCCACTC+TGG 0.482592 3:+10209648 None:intergenic
CATGAACGGGAACATTGCTT+TGG 0.482998 3:+10207951 None:intergenic
AAAAGCAATAATTCAAGAAA+GGG 0.484665 3:-10208194 MsG0380012054.01.T01:CDS
TTGTGAAGAAGAAAATAAAG+AGG 0.484699 3:-10209162 MsG0380012054.01.T01:CDS
TTCTTGATCCATATTATGCT+CGG 0.484793 3:+10209753 None:intergenic
ACTCTTCCTCCTGAAGGATC+TGG 0.486295 3:-10209298 MsG0380012054.01.T01:CDS
ATGTTATCAGTCCCGGCAAA+AGG 0.487183 3:+10207743 None:intergenic
TCACGGTCATTCAAATAAAT+GGG 0.488961 3:+10207908 None:intergenic
GATCAAGAAGAGGCCAAGAT+TGG 0.492951 3:-10209739 MsG0380012054.01.T01:CDS
GAGTATAGCTCTGCTGTTCA+CGG 0.493062 3:+10207891 None:intergenic
CTCCAAAAGAAATGAATCAT+GGG 0.493696 3:+10208084 None:intergenic
AGAGAGAGAGTAACCTGGGC+AGG 0.493996 3:+10208560 None:intergenic
GAGGCTCCGGGTCGGGTCAG+AGG 0.498834 3:-10208172 MsG0380012054.01.T01:CDS
GATGTTCTACGGATCAAGCC+TGG 0.501388 3:-10208692 MsG0380012054.01.T01:CDS
TTGCACAGGGAAAGAGCTGT+TGG 0.501730 3:-10208136 MsG0380012054.01.T01:CDS
ACTGCTGAATGAGCTCCAAC+TGG 0.502972 3:+10208241 None:intergenic
AAGCACAAGGAGTCAAATAA+GGG 0.505342 3:-10208881 MsG0380012054.01.T01:CDS
CCTTCGCATGTTATCAGTCC+CGG 0.507344 3:+10207736 None:intergenic
CTTAAGGCCAAGAAGAAGAA+TGG 0.510846 3:-10209196 MsG0380012054.01.T01:CDS
TAACGATCATCTATATGGTC+AGG 0.513759 3:+10207860 None:intergenic
TCCTATGGAGAAGAGTCATC+AGG 0.514660 3:-10208966 MsG0380012054.01.T01:CDS
CAGTAATGACAAAAGTCCTA+TGG 0.516763 3:-10208981 MsG0380012054.01.T01:CDS
GAAAGCTCTCACAATGCAGA+TGG 0.517581 3:-10209112 MsG0380012054.01.T01:CDS
GATCAAGAAGAGAGCAAGAT+GGG 0.525831 3:-10209394 MsG0380012054.01.T01:CDS
GATCAAGAAGAGAGCAAGAT+GGG 0.525831 3:-10209505 MsG0380012054.01.T01:CDS
GAAGCAGCAAAAGATAGTCC+AGG 0.525910 3:+10211696 None:intergenic
TAACATGAAAGATAGTCAAA+AGG 0.528007 3:+10207516 None:intergenic
GATCAAGAAGAGAACAAGTT+GGG 0.533123 3:-10209622 MsG0380012054.01.T01:CDS
TACAAGGCTTCATCTTCTGG+TGG 0.535343 3:-10208620 MsG0380012054.01.T01:CDS
GGTGAAGCTCAGAATTTGGT+TGG 0.535547 3:-10211734 MsG0380012054.01.T01:five_prime_UTR
AGATAAGGAGATCAATCTGT+TGG 0.536087 3:-10208936 MsG0380012054.01.T01:CDS
ACTTGTGCAACAGTAAGTTC+TGG 0.541360 3:+10208369 None:intergenic
AACTAAGGACGAACCACCTA+AGG 0.542788 3:-10209056 MsG0380012054.01.T01:CDS
ACTTGAATCAAGAAGAGAGC+AGG 0.543234 3:-10209588 MsG0380012054.01.T01:CDS
CGTGATCCTCTGACCCGACC+CGG 0.543581 3:+10208166 None:intergenic
TGTTTCCGCTATCGTGTCAT+GGG 0.543621 3:-10208737 MsG0380012054.01.T01:CDS
TCGATATGGTGCTTCATCTA+GGG 0.543884 3:-10207831 MsG0380012054.01.T01:CDS
GCTGCTATATGGAGTTTACA+AGG 0.546827 3:-10208636 MsG0380012054.01.T01:CDS
TACCCAGCAGAATGAAACTA+AGG 0.548279 3:-10209071 MsG0380012054.01.T01:CDS
AGGAGAACGAACGAGTTGAC+CGG 0.548636 3:+10213774 None:intergenic
GTAACCTTCTCACTCAACTC+TGG 0.553426 3:+10209271 None:intergenic
TCGAAGACTTTCAACATGAA+CGG 0.557527 3:+10207937 None:intergenic
CAAATACGAGCTGGGAGCGA+TGG 0.559692 3:+10207778 None:intergenic
GGTTACTCCACAATCATTGA+AGG 0.568854 3:-10209254 MsG0380012054.01.T01:CDS
GGAACATTGCTTTGGTAGCG+AGG 0.570176 3:+10207959 None:intergenic
AAGGATACTCTTCCTCCTGA+AGG 0.571124 3:-10209304 MsG0380012054.01.T01:CDS
TTGATCCATGTTATGCTCAG+TGG 0.571369 3:+10209639 None:intergenic
GATCACGACACAATTTGCAC+AGG 0.580245 3:-10208150 MsG0380012054.01.T01:CDS
ATTCAAGAAAGGGAGGCTCC+GGG 0.581550 3:-10208184 MsG0380012054.01.T01:CDS
CTTGGCTCCTTTAAGTAGAG+AGG 0.581675 3:-10207801 MsG0380012054.01.T01:CDS
AGTCAGCGACGAGAATATGA+AGG 0.582476 3:+10207572 None:intergenic
AAGAAAGGGAGGCTCCGGGT+CGG 0.582964 3:-10208180 MsG0380012054.01.T01:CDS
GTCAAAAGGAAGACATGCCA+AGG 0.583234 3:+10207530 None:intergenic
AAAGCTCTCACAATGCAGAT+GGG 0.585921 3:-10209111 MsG0380012054.01.T01:CDS
TGAGTTAACTCACCTCCCTA+AGG 0.585989 3:-10213750 MsG0380012054.01.T01:intron
TCCTGATGACTCTTCTCCAT+AGG 0.586477 3:+10208965 None:intergenic
GGATCAAGAAGAGAACAAGT+TGG 0.587889 3:-10209623 MsG0380012054.01.T01:CDS
ACATCGATCAAGAAGAGAGT+AGG 0.587941 3:-10209438 MsG0380012054.01.T01:CDS
ACATCGATCAAGAAGAGAGT+AGG 0.587941 3:-10209549 MsG0380012054.01.T01:CDS
AGAAAATGATGACAACAAGA+AGG 0.588292 3:-10209323 MsG0380012054.01.T01:CDS
AGCAATAATTCAAGAAAGGG+AGG 0.591340 3:-10208191 MsG0380012054.01.T01:CDS
GGTAGCGAGGTTCCACGAGA+CGG 0.593394 3:+10207972 None:intergenic
TCATGTTGAAAGTCTTCGAA+GGG 0.597349 3:-10207933 MsG0380012054.01.T01:CDS
AGATGAAGCACCATATCGAT+AGG 0.598566 3:+10207835 None:intergenic
TGATCAAGAAGAGAGCAAGA+TGG 0.599172 3:-10209395 MsG0380012054.01.T01:CDS
TGATCAAGAAGAGAGCAAGA+TGG 0.599172 3:-10209506 MsG0380012054.01.T01:CDS
TTCATGTTGAAAGTCTTCGA+AGG 0.599724 3:-10207934 MsG0380012054.01.T01:CDS
AGTGGCCACTGAGCATAACA+TGG 0.601846 3:-10209644 MsG0380012054.01.T01:CDS
CGATCAAGAAGAGAGTAGGA+TGG 0.603442 3:-10209434 MsG0380012054.01.T01:CDS
ATTATCGAGCTTATGATCGA+AGG 0.604784 3:-10208057 MsG0380012054.01.T01:CDS
CCCAGCTCGTATTTGGTTGG+GGG 0.605181 3:-10207770 MsG0380012054.01.T01:CDS
TAAAGAAAGAGCTTAAGTCC+AGG 0.606025 3:+10208674 None:intergenic
AAGCAGCAAAAGATAGTCCA+GGG 0.608928 3:+10211697 None:intergenic
TACTATGCAGATACTTAGCA+CGG 0.609640 3:+10209833 None:intergenic
AACTTGCCACCAAAAGCTTG+GGG 0.610842 3:+10208584 None:intergenic
GATGGTCACTGAGCATAACA+TGG 0.612089 3:-10209683 MsG0380012054.01.T01:CDS
AGCTTATGATCGAAGGAATG+TGG 0.612129 3:-10208050 MsG0380012054.01.T01:CDS
GGCGGAAAACAATGAAGTGA+AGG 0.613148 3:-10209020 MsG0380012054.01.T01:CDS
CGATCAAGAAGAGAGTAGGA+TGG 0.615486 3:-10209545 MsG0380012054.01.T01:CDS
TAACGAGATGAAACTCGTAA+AGG 0.618460 3:+10207608 None:intergenic
AGAACGAACGAGTTGACCGG+TGG 0.622905 3:+10213777 None:intergenic
CTGAATGAGCTCCAACTGGT+CGG 0.623621 3:+10208245 None:intergenic
TTTCTTCTTCACAATCTTGG+GGG 0.624109 3:+10209171 None:intergenic
CGAACGAGTTGACCGGTGGA+AGG 0.624213 3:+10213781 None:intergenic
TGGTAAACTTATCACAACCC+TGG 0.624873 3:-10211714 MsG0380012054.01.T01:five_prime_UTR
AGATTATGAATACCGTCTCG+TGG 0.629700 3:-10207984 MsG0380012054.01.T01:CDS
TAAACCAGAGTTGAGTGAGA+AGG 0.630738 3:-10209275 MsG0380012054.01.T01:CDS
TCCAAAAGAAATGAATCATG+GGG 0.636908 3:+10208085 None:intergenic
CATCAAGTGCAGCCATATCG+GGG 0.640837 3:-10207650 MsG0380012054.01.T01:CDS
GCATAATATGGATCAAGAAG+AGG 0.641425 3:-10209749 MsG0380012054.01.T01:CDS
GATTGGCACTGAGAATAATG+TGG 0.642695 3:-10209722 MsG0380012054.01.T01:CDS
GTCAGCGACGAGAATATGAA+GGG 0.650249 3:+10207573 None:intergenic
GAAGAGTGAAGAGAAGCACA+AGG 0.656543 3:-10208894 MsG0380012054.01.T01:CDS
AGATGAAACTCGTAAAGGTG+AGG 0.658810 3:+10207613 None:intergenic
GAATCAAGAAGAGAGCAGGA+TGG 0.659853 3:-10209584 MsG0380012054.01.T01:CDS
CCGGGACTGATAACATGCGA+AGG 0.663098 3:-10207736 MsG0380012054.01.T01:CDS
GGTTTACCAGATCCTTCAGG+AGG 0.667297 3:+10209292 None:intergenic
TCAAAAGGAAGACATGCCAA+GGG 0.670808 3:+10207531 None:intergenic
AAAGAGAGAGTACCTTAGGG+AGG 0.676576 3:+10213738 None:intergenic
GGATCAGGAAGAGAGCAAGA+TGG 0.678025 3:-10209701 MsG0380012054.01.T01:CDS
ATCACGACACAATTTGCACA+GGG 0.684023 3:-10208149 MsG0380012054.01.T01:CDS
AGTCAAATAAGGGTTCTAGG+AGG 0.684219 3:-10208871 MsG0380012054.01.T01:CDS
AAACACCCATGACACGATAG+CGG 0.684982 3:+10208732 None:intergenic
ACATCAACTTGAGCGTCGAG+AGG 0.689167 3:-10208113 MsG0380012054.01.T01:CDS
AGGGAGGTGAGTTAACTCAG+AGG 0.710193 3:+10213754 None:intergenic
GGATCAAGAAGAGTCCAGAG+TGG 0.771185 3:-10209662 MsG0380012054.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAATGAACTTAAAA+AGG + Chr3:10209292-10209311 None:intergenic 10.0%
!! ATAATAATAACTAAGAAATA+TGG + Chr3:10210768-10210787 None:intergenic 10.0%
!! TAATAATAACTAAGAAATAT+GGG + Chr3:10210767-10210786 None:intergenic 10.0%
!!! ATTTACTTTGTTTTATTTAT+TGG - Chr3:10211409-10211428 MsG0380012054.01.T01:intron 10.0%
!!! TATTCATTATTTCTATTTTT+CGG - Chr3:10207869-10207888 MsG0380012054.01.T01:CDS 10.0%
!!! TTTAAGTTCATTTATTTTTA+TGG - Chr3:10209293-10209312 MsG0380012054.01.T01:CDS 10.0%
!!! TTTTTTTTTTTTTTGACAAA+AGG + Chr3:10208735-10208754 None:intergenic 10.0%
!! AATAAAAAATAAAATAGACG+CGG - Chr3:10208118-10208137 MsG0380012054.01.T01:CDS 15.0%
!! TATAAAATATAAGCAATAGT+CGG - Chr3:10207972-10207991 MsG0380012054.01.T01:CDS 15.0%
!! TCATAAAAAAAACTATCAAA+AGG + Chr3:10211262-10211281 None:intergenic 15.0%
!! TTAATGAAGAAACAAATAAA+CGG + Chr3:10207687-10207706 None:intergenic 15.0%
!!! AATTTGCTTATATTTTGTAA+CGG - Chr3:10208027-10208046 MsG0380012054.01.T01:CDS 15.0%
!!! TTGCTTATATTTTATATAAG+AGG + Chr3:10207968-10207987 None:intergenic 15.0%
!! AAAAACAAAAACAAGACAAA+TGG - Chr3:10212451-10212470 MsG0380012054.01.T01:intron 20.0%
!! AAAAATTGTTAAGAAATCTC+TGG - Chr3:10212069-10212088 MsG0380012054.01.T01:intron 20.0%
!! AAAAGCAATAATTCAAGAAA+GGG - Chr3:10213102-10213121 MsG0380012054.01.T01:intron 20.0%
!! AAAATTAGTATCAATGTGTT+TGG - Chr3:10208584-10208603 MsG0380012054.01.T01:CDS 20.0%
!! AAATATAGAAGATTAAGAGA+TGG + Chr3:10208712-10208731 None:intergenic 20.0%
!! AATATAGAAGATTAAGAGAT+GGG + Chr3:10208711-10208730 None:intergenic 20.0%
!! AGAATGAATTAGAATTTCAA+TGG - Chr3:10208843-10208862 MsG0380012054.01.T01:CDS 20.0%
!! ATCATAAAAATTTGTCATCT+GGG + Chr3:10207936-10207955 None:intergenic 20.0%
!! ATTAATACTTCTATATAGGT+TGG + Chr3:10209502-10209521 None:intergenic 20.0%
!! ATTCCTTTATTAATTCTTCA+CGG + Chr3:10208502-10208521 None:intergenic 20.0%
!! CTCATTAAAAATCTAACATA+TGG - Chr3:10210613-10210632 MsG0380012054.01.T01:intron 20.0%
!! GAAAAATCACAATGTATTAA+CGG + Chr3:10210568-10210587 None:intergenic 20.0%
!! GCTAATTAATACTTCTATAT+AGG + Chr3:10209506-10209525 None:intergenic 20.0%
!! TATGAAAAGAAATTCAAACA+AGG + Chr3:10209818-10209837 None:intergenic 20.0%
!! TATGTAATAATCGTTAATTG+AGG - Chr3:10209938-10209957 MsG0380012054.01.T01:intron 20.0%
!! TGTAATATTATTCAATCTAC+TGG - Chr3:10210453-10210472 MsG0380012054.01.T01:intron 20.0%
!!! AAGATAATCTGTAATTTTTG+GGG - Chr3:10209636-10209655 MsG0380012054.01.T01:CDS 20.0%
!!! AGAAAAATTGAATTGATGAT+CGG + Chr3:10207585-10207604 None:intergenic 20.0%
!!! AGAGTTGCTTTTATTTTTTT+TGG - Chr3:10208660-10208679 MsG0380012054.01.T01:CDS 20.0%
!!! ATTATGATTTGTATCTCTAT+TGG - Chr3:10210783-10210802 MsG0380012054.01.T01:intron 20.0%
!!! CAAGATAATCTGTAATTTTT+GGG - Chr3:10209635-10209654 MsG0380012054.01.T01:CDS 20.0%
!!! TACTTTGTTTTATTTATTGG+TGG - Chr3:10211412-10211431 MsG0380012054.01.T01:intron 20.0%
!!! TCAAGATAATCTGTAATTTT+TGG - Chr3:10209634-10209653 MsG0380012054.01.T01:CDS 20.0%
!!! TGTTACTGTAATACTTTTTA+GGG - Chr3:10209753-10209772 MsG0380012054.01.T01:CDS 20.0%
!!! TGTTTTATTTTAGAATGACA+GGG + Chr3:10210896-10210915 None:intergenic 20.0%
!!! TTGTTTTATTTTAGAATGAC+AGG + Chr3:10210897-10210916 None:intergenic 20.0%
!!! TTGTTTTTTATAGATATGAC+TGG + Chr3:10208100-10208119 None:intergenic 20.0%
!!! TTTAAATGCTGTTTAATGTA+CGG - Chr3:10213885-10213904 MsG0380012054.01.T01:five_prime_UTR 20.0%
!!! TTTCTTTTATTGCTATATCA+TGG - Chr3:10212980-10212999 MsG0380012054.01.T01:intron 20.0%
! AAAAAGTAGCATTTCGAATT+CGG + Chr3:10208455-10208474 None:intergenic 25.0%
! AAATATGGGAACTAATTTCA+AGG + Chr3:10210753-10210772 None:intergenic 25.0%
! AAATTCAGATATGCATGAAT+TGG - Chr3:10210488-10210507 MsG0380012054.01.T01:intron 25.0%
! AACTTTCAATCGTAACAAAA+AGG - Chr3:10210051-10210070 MsG0380012054.01.T01:intron 25.0%
! AATACAGAGTTTGAAGAATA+TGG - Chr3:10209987-10210006 MsG0380012054.01.T01:intron 25.0%
! AATACAGCGTAAAAAATAAG+AGG + Chr3:10209919-10209938 None:intergenic 25.0%
! AATCTAAATACCATTCTTGA+AGG + Chr3:10210352-10210371 None:intergenic 25.0%
! AATTTCAATGGAAATCAACA+CGG - Chr3:10208855-10208874 MsG0380012054.01.T01:CDS 25.0%
! AGGTGGAGTTATTATTAATA+TGG - Chr3:10210170-10210189 MsG0380012054.01.T01:intron 25.0%
! ATAATATTACAGTACCTCAA+CGG + Chr3:10210444-10210463 None:intergenic 25.0%
! CAAAAGCAATAATTCAAGAA+AGG - Chr3:10213101-10213120 MsG0380012054.01.T01:intron 25.0%
! CATCATAAAAATTTGTCATC+TGG + Chr3:10207937-10207956 None:intergenic 25.0%
! CTCAATGAAGAAATGTTATT+CGG + Chr3:10213865-10213884 None:intergenic 25.0%
! TAAAATCACCTACAAAAAAG+CGG + Chr3:10209104-10209123 None:intergenic 25.0%
! TAAATATTGAACAGATCACA+AGG + Chr3:10208903-10208922 None:intergenic 25.0%
! TAACATGAAAGATAGTCAAA+AGG + Chr3:10213783-10213802 None:intergenic 25.0%
! TATTCATAATCTCTCTCATA+AGG + Chr3:10213304-10213323 None:intergenic 25.0%
! TCATAAAAATTTGTCATCTG+GGG + Chr3:10207935-10207954 None:intergenic 25.0%
! TCTATGAATCATAAATGCTT+AGG - Chr3:10213827-10213846 MsG0380012054.01.T01:five_prime_UTR 25.0%
! TTAGGATTAGAAGAAAATTC+AGG + Chr3:10211830-10211849 None:intergenic 25.0%
! TTCTCATGTTAATCCTATAA+GGG - Chr3:10213276-10213295 MsG0380012054.01.T01:intron 25.0%
! TTGTCAAATTGCATGATTTA+TGG - Chr3:10210085-10210104 MsG0380012054.01.T01:intron 25.0%
! TTGTGAAGAAGAAAATAAAG+AGG - Chr3:10212134-10212153 MsG0380012054.01.T01:intron 25.0%
! TTGTTCTTAGATCTTCTAAT+TGG - Chr3:10209962-10209981 MsG0380012054.01.T01:intron 25.0%
!! AAGGAAATAATTTCTTTTCC+AGG + Chr3:10209367-10209386 None:intergenic 25.0%
!! ATTTTCTTCTTCACAATCTT+GGG + Chr3:10212130-10212149 None:intergenic 25.0%
!! CATATCTGAATTTGTTCATT+TGG + Chr3:10210481-10210500 None:intergenic 25.0%
!! CTTTCTTGAATTATTGCTTT+TGG + Chr3:10213103-10213122 None:intergenic 25.0%
!! GTTACAGTAACATTTTTCTT+TGG - Chr3:10211434-10211453 MsG0380012054.01.T01:intron 25.0%
!! TACAGCTCAAAAAACTTTTA+AGG + Chr3:10209386-10209405 None:intergenic 25.0%
!! TATTTTCTTCTTCACAATCT+TGG + Chr3:10212131-10212150 None:intergenic 25.0%
!! TCGAATAAAATGTGTTTTCT+TGG - Chr3:10210414-10210433 MsG0380012054.01.T01:intron 25.0%
!!! ATTTTGCTATCTGTTTATTC+TGG - Chr3:10212760-10212779 MsG0380012054.01.T01:intron 25.0%
!!! GTGTTACTGTAATACTTTTT+AGG - Chr3:10209752-10209771 MsG0380012054.01.T01:CDS 25.0%
!!! GTTTTATTTTAGAATGACAG+GGG + Chr3:10210895-10210914 None:intergenic 25.0%
!!! TATTTTTTGAGTTGTTAGTC+AGG - Chr3:10208820-10208839 MsG0380012054.01.T01:CDS 25.0%
AAAGTTTATACAGTTAACCC+AGG + Chr3:10210037-10210056 None:intergenic 30.0%
AACTATTCTTGTCAGATGTA+TGG - Chr3:10211112-10211131 MsG0380012054.01.T01:intron 30.0%
AAGAGGAAGAACAAAAAAGT+AGG - Chr3:10212151-10212170 MsG0380012054.01.T01:intron 30.0%
AATCATGATTCTGCTAGATA+CGG + Chr3:10211035-10211054 None:intergenic 30.0%
AGAAAATGATGACAACAAGA+AGG - Chr3:10211973-10211992 MsG0380012054.01.T01:intron 30.0%
AGAGGAAGAACAAAAAAGTA+GGG - Chr3:10212152-10212171 MsG0380012054.01.T01:intron 30.0%
ATATAACTGGCACATTCTTA+AGG + Chr3:10207908-10207927 None:intergenic 30.0%
ATTCCTCTGACAATATTGTT+TGG - Chr3:10209323-10209342 MsG0380012054.01.T01:CDS 30.0%
CTAAAAAGGATGATGTTCTA+CGG - Chr3:10212593-10212612 MsG0380012054.01.T01:intron 30.0%
CTCCAAAAGAAATGAATCAT+GGG + Chr3:10213215-10213234 None:intergenic 30.0%
CTTCTCATGTTAATCCTATA+AGG - Chr3:10213275-10213294 MsG0380012054.01.T01:intron 30.0%
GAATGTACTGGGAAATAATA+TGG + Chr3:10210312-10210331 None:intergenic 30.0%
GTTCCGTGAAGAATTAATAA+AGG - Chr3:10208496-10208515 MsG0380012054.01.T01:intron 30.0%
TAACCAAACAATATTGTCAG+AGG + Chr3:10209329-10209348 None:intergenic 30.0%
TAATGAGGCTTGTATGTATA+AGG - Chr3:10210812-10210831 MsG0380012054.01.T01:intron 30.0%
TCACGGTCATTCAAATAAAT+GGG + Chr3:10213391-10213410 None:intergenic 30.0%
TCATCAGGATGAAAAAGATA+AGG - Chr3:10212345-10212364 MsG0380012054.01.T01:intron 30.0%
TCCAAAAGAAATGAATCATG+GGG + Chr3:10213214-10213233 None:intergenic 30.0%
TCTCCAAAAGAAATGAATCA+TGG + Chr3:10213216-10213235 None:intergenic 30.0%
TGCGCTAAAAAACATTTCAT+AGG - Chr3:10208146-10208165 MsG0380012054.01.T01:CDS 30.0%
TTAAATTACATACCAGAACC+TGG - Chr3:10209346-10209365 MsG0380012054.01.T01:CDS 30.0%
TTCACGGTCATTCAAATAAA+TGG + Chr3:10213392-10213411 None:intergenic 30.0%
TTCATAATACAGATACACCT+GGG - Chr3:10210017-10210036 MsG0380012054.01.T01:intron 30.0%
TTCTATATTTCCTTTCCGTT+GGG - Chr3:10208760-10208779 MsG0380012054.01.T01:CDS 30.0%
TTCTTGATCCATATTATGCT+CGG + Chr3:10211546-10211565 None:intergenic 30.0%
TTTCTATATTTCCTTTCCGT+TGG - Chr3:10208759-10208778 MsG0380012054.01.T01:CDS 30.0%
TTTGCGAATGAAATTGAGAT+TGG + Chr3:10207629-10207648 None:intergenic 30.0%
! ATAATTTCTTTTCCAGGTTC+TGG + Chr3:10209361-10209380 None:intergenic 30.0%
! ATTTTATTCGAGAGAAATGG+AGG + Chr3:10210405-10210424 None:intergenic 30.0%
! CACATTTTATTCGAGAGAAA+TGG + Chr3:10210408-10210427 None:intergenic 30.0%
! CATTTTCAAAAAGGCTATCA+AGG - Chr3:10212875-10212894 MsG0380012054.01.T01:intron 30.0%
! CTAGACTTTTGTGTGTATTT+AGG - Chr3:10209217-10209236 MsG0380012054.01.T01:CDS 30.0%
! GATTTGTATCTCTATTGGTT+AGG - Chr3:10210788-10210807 MsG0380012054.01.T01:intron 30.0%
! GCTTTTGGATGAGAAAAAAT+GGG + Chr3:10213088-10213107 None:intergenic 30.0%
! TCTAAAAAGCTAGTTTCTGT+AGG - Chr3:10208523-10208542 MsG0380012054.01.T01:intron 30.0%
! TGCTTTTGGATGAGAAAAAA+TGG + Chr3:10213089-10213108 None:intergenic 30.0%
! TTGCTTATATTTTGTAACGG+AGG - Chr3:10208030-10208049 MsG0380012054.01.T01:CDS 30.0%
! TTTAATCTGAAGCTGCTATA+TGG - Chr3:10212649-10212668 MsG0380012054.01.T01:intron 30.0%
! TTTTCTTCTTCACAATCTTG+GGG + Chr3:10212129-10212148 None:intergenic 30.0%
!! ATAATCTGTAATTTTTGGGG+TGG - Chr3:10209639-10209658 MsG0380012054.01.T01:CDS 30.0%
!! TCACTCTTTTTGTCATTTGA+TGG + Chr3:10212490-10212509 None:intergenic 30.0%
!! TGGTTGGTCTTTATTAATGA+TGG - Chr3:10212780-10212799 MsG0380012054.01.T01:intron 30.0%
!!! ATATAAGACCGCTTTTTTGT+AGG - Chr3:10209093-10209112 MsG0380012054.01.T01:CDS 30.0%
!!! ATTTCTATTTTTCGGTGTTG+TGG - Chr3:10207877-10207896 MsG0380012054.01.T01:CDS 30.0%
!!! CTACTTTTTAGGAGATATGT+TGG - Chr3:10210648-10210667 MsG0380012054.01.T01:intron 30.0%
!!! GCTTGTGTTATTTTCTTTCT+AGG + Chr3:10209411-10209430 None:intergenic 30.0%
!!! TAATCTGTAATTTTTGGGGT+GGG - Chr3:10209640-10209659 MsG0380012054.01.T01:CDS 30.0%
!!! TATTTTGAGACCTTCAAGAA+TGG - Chr3:10210339-10210358 MsG0380012054.01.T01:intron 30.0%
!!! TTTCTATTTTTCGGTGTTGT+GGG - Chr3:10207878-10207897 MsG0380012054.01.T01:CDS 30.0%
!!! TTTTTTGCCTTCAATGATTG+TGG + Chr3:10212052-10212071 None:intergenic 30.0%
AAAAAGAGTGAAAAGCTTGG+TGG - Chr3:10212499-10212518 MsG0380012054.01.T01:intron 35.0%
AAAAGAAACAGAAAACCACG+AGG + Chr3:10212968-10212987 None:intergenic 35.0%
AAATAACAGGTGGAATGTAC+TGG + Chr3:10210324-10210343 None:intergenic 35.0%
AAATAAGAGAGAGAGTAACC+TGG + Chr3:10212744-10212763 None:intergenic 35.0%
AAATGGAGGAATGGTATTTG+AGG + Chr3:10210391-10210410 None:intergenic 35.0%
AACATGCAATTTGAATCCCT+TGG - Chr3:10213749-10213768 MsG0380012054.01.T01:intron 35.0%
AAGCACAAGGAGTCAAATAA+GGG - Chr3:10212415-10212434 MsG0380012054.01.T01:intron 35.0%
AAGTAGCTGGAAGAAAAAAG+AGG - Chr3:10210150-10210169 MsG0380012054.01.T01:intron 35.0%
AAGTGAAGGTAAGTCAGAAT+AGG - Chr3:10212290-10212309 MsG0380012054.01.T01:intron 35.0%
AATAACAGGTGGAATGTACT+GGG + Chr3:10210323-10210342 None:intergenic 35.0%
AATAAGAGAGAGAGTAACCT+GGG + Chr3:10212743-10212762 None:intergenic 35.0%
AGAAGATAGCTTCTAAGTGT+TGG + Chr3:10211355-10211374 None:intergenic 35.0%
AGACTTAAACAAGCAGATGA+TGG + Chr3:10210595-10210614 None:intergenic 35.0%
AGAGTTTCGATTCATAGCAA+TGG + Chr3:10211080-10211099 None:intergenic 35.0%
AGATAAGGAGATCAATCTGT+TGG - Chr3:10212360-10212379 MsG0380012054.01.T01:intron 35.0%
AGCAATAATTCAAGAAAGGG+AGG - Chr3:10213105-10213124 MsG0380012054.01.T01:intron 35.0%
AGGCATAACGATCATCTATA+TGG + Chr3:10213444-10213463 None:intergenic 35.0%
ATATGACACTCAAAAACCTG+AGG - Chr3:10209025-10209044 MsG0380012054.01.T01:CDS 35.0%
ATATTCAAATGTTCTGCTCC+AGG - Chr3:10213006-10213025 MsG0380012054.01.T01:intron 35.0%
ATTATCGAGCTTATGATCGA+AGG - Chr3:10213239-10213258 MsG0380012054.01.T01:intron 35.0%
ATTATTCTCAGTGCCAATCT+TGG + Chr3:10211573-10211592 None:intergenic 35.0%
ATTCAGTGTCCAACAAATGA+TGG + Chr3:10208993-10209012 None:intergenic 35.0%
CAAAAACAAGACAAATGGCA+CGG - Chr3:10212456-10212475 MsG0380012054.01.T01:intron 35.0%
CAGATGAGAACATTCTTAGA+CGG - Chr3:10209893-10209912 MsG0380012054.01.T01:intron 35.0%
CAGTAATGACAAAAGTCCTA+TGG - Chr3:10212315-10212334 MsG0380012054.01.T01:intron 35.0%
CATAAATGCTTAGGTAACTC+TGG - Chr3:10213836-10213855 MsG0380012054.01.T01:five_prime_UTR 35.0%
CCAACACATGTGATTACATT+CGG - Chr3:10207845-10207864 MsG0380012054.01.T01:CDS 35.0%
CTGAAATATAACAGACCCAA+CGG + Chr3:10208778-10208797 None:intergenic 35.0%
CTTGAAGGTCTCAAAATAAC+AGG + Chr3:10210337-10210356 None:intergenic 35.0%
GACAAAAAGAGTGAAAAGCT+TGG - Chr3:10212496-10212515 MsG0380012054.01.T01:intron 35.0%
GAGGAAGAACAAAAAAGTAG+GGG - Chr3:10212153-10212172 MsG0380012054.01.T01:intron 35.0%
GATCAAGAAGAGAACAAGTT+GGG - Chr3:10211674-10211693 MsG0380012054.01.T01:intron 35.0%
GCATAATATGGATCAAGAAG+AGG - Chr3:10211547-10211566 MsG0380012054.01.T01:intron 35.0%
GTATGAGTATATTGTGGATC+TGG - Chr3:10209664-10209683 MsG0380012054.01.T01:CDS 35.0%
GTTCATAATACAGATACACC+TGG - Chr3:10210016-10210035 MsG0380012054.01.T01:intron 35.0%
TAAAGAAAGAGCTTAAGTCC+AGG + Chr3:10212625-10212644 None:intergenic 35.0%
TAACGAGATGAAACTCGTAA+AGG + Chr3:10213691-10213710 None:intergenic 35.0%
TAACGATCATCTATATGGTC+AGG + Chr3:10213439-10213458 None:intergenic 35.0%
TACTATGCAGATACTTAGCA+CGG + Chr3:10211466-10211485 None:intergenic 35.0%
TCATGTTGAAAGTCTTCGAA+GGG - Chr3:10213363-10213382 MsG0380012054.01.T01:intron 35.0%
TCGAAGACTTTCAACATGAA+CGG + Chr3:10213362-10213381 None:intergenic 35.0%
TCTTCTTGATCGATGTTATG+AGG + Chr3:10211743-10211762 None:intergenic 35.0%
TGATCAAGAAGAGAGCAAAT+TGG - Chr3:10211517-10211536 MsG0380012054.01.T01:intron 35.0%
TGATCGATGTTATGAGGATT+AGG + Chr3:10211848-10211867 None:intergenic 35.0%
TGATGTGCATAGTTTAGTCT+TGG - Chr3:10209049-10209068 MsG0380012054.01.T01:CDS 35.0%
TGCTAAGTATCTGCATAGTA+TGG - Chr3:10211466-10211485 MsG0380012054.01.T01:intron 35.0%
TGCTATCTGTTTATTCTGGT+TGG - Chr3:10212764-10212783 MsG0380012054.01.T01:intron 35.0%
TGCTATGTTGAACAACAGAA+AGG - Chr3:10209541-10209560 MsG0380012054.01.T01:CDS 35.0%
TGTACATGTCCATCATTTGT+TGG - Chr3:10208981-10209000 MsG0380012054.01.T01:CDS 35.0%
TGTCAGATGTATGGAAATCT+GGG - Chr3:10211121-10211140 MsG0380012054.01.T01:intron 35.0%
TTCATGTTGAAAGTCTTCGA+AGG - Chr3:10213362-10213381 MsG0380012054.01.T01:intron 35.0%
TTGTCAGATGTATGGAAATC+TGG - Chr3:10211120-10211139 MsG0380012054.01.T01:intron 35.0%
TTTCTTCTTCACAATCTTGG+GGG + Chr3:10212128-10212147 None:intergenic 35.0%
! ATCTCTGGTTCCTAAACTTA+AGG - Chr3:10212084-10212103 MsG0380012054.01.T01:intron 35.0%
! CATAGCAGATGAAGTGTTAT+TGG + Chr3:10210514-10210533 None:intergenic 35.0%
! CATCATTTTCTGATGACTGA+GGG + Chr3:10211964-10211983 None:intergenic 35.0%
! CTATCTTCTGTCATCTTTTG+TGG - Chr3:10211366-10211385 MsG0380012054.01.T01:intron 35.0%
! CTCTATTGGTTAGGATAATG+AGG - Chr3:10210797-10210816 MsG0380012054.01.T01:intron 35.0%
! GTTTGTTGAAGCAATTGTTG+TGG - Chr3:10207750-10207769 MsG0380012054.01.T01:CDS 35.0%
! TCATCATTTTCTGATGACTG+AGG + Chr3:10211965-10211984 None:intergenic 35.0%
! TCCCCATGATTCATTTCTTT+TGG - Chr3:10213210-10213229 MsG0380012054.01.T01:intron 35.0%
!! AGAGTTTGCTATACGTTGAT+CGG - Chr3:10210273-10210292 MsG0380012054.01.T01:intron 35.0%
!! ATAGCTTCTAAGTGTTGGAA+AGG + Chr3:10211350-10211369 None:intergenic 35.0%
!! CACAACAACTCTAGTCTTTT+GGG - Chr3:10210217-10210236 MsG0380012054.01.T01:intron 35.0%
!! GCCTTTTTGAAAATGCTTTC+CGG + Chr3:10212870-10212889 None:intergenic 35.0%
!! GGAATTTCTAGTTTCAGCTA+TGG - Chr3:10208605-10208624 MsG0380012054.01.T01:CDS 35.0%
!! TAAGTGTTGGAAAGGTAACA+TGG + Chr3:10211342-10211361 None:intergenic 35.0%
!! TCTAGTCTTTTGGGTGTATT+GGG - Chr3:10210226-10210245 MsG0380012054.01.T01:intron 35.0%
!! TTCTTCTTGGCCTTAAGTTT+AGG + Chr3:10212097-10212116 None:intergenic 35.0%
!!! ACCGGAAAGCATTTTCAAAA+AGG - Chr3:10212866-10212885 MsG0380012054.01.T01:intron 35.0%
!!! GTATCTGAAGGCTACTTTTT+AGG - Chr3:10210637-10210656 MsG0380012054.01.T01:intron 35.0%
!!! TAACATGCACCACTTTTTAG+TGG - Chr3:10210842-10210861 MsG0380012054.01.T01:intron 35.0%
!!! TTCTATTTTTCGGTGTTGTG+GGG - Chr3:10207879-10207898 MsG0380012054.01.T01:CDS 35.0%
AAACTATGCACATCATCCTC+AGG + Chr3:10209044-10209063 None:intergenic 40.0%
AAACTTGCCACCAAAAGCTT+GGG + Chr3:10212716-10212735 None:intergenic 40.0%
AAAGCTCTCACAATGCAGAT+GGG - Chr3:10212185-10212204 MsG0380012054.01.T01:intron 40.0%
AAGCAGCAAAAGATAGTCCA+GGG + Chr3:10209602-10209621 None:intergenic 40.0%
ACATCGATCAAGAAGAGAGT+AGG - Chr3:10211747-10211766 MsG0380012054.01.T01:intron 40.0%
ACCAATGCACCACTAAAAAG+TGG + Chr3:10210854-10210873 None:intergenic 40.0%
ACCACCTAAGGAGAAAAATC+AGG - Chr3:10212252-10212271 MsG0380012054.01.T01:intron 40.0%
ACCTAAGGAGAAAAATCAGG+AGG - Chr3:10212255-10212274 MsG0380012054.01.T01:intron 40.0%
ACGTGTGTGAAGTTTGAACT+TGG + Chr3:10208345-10208364 None:intergenic 40.0%
ACTTGAATCAAGAAGAGAGC+AGG - Chr3:10211708-10211727 MsG0380012054.01.T01:five_prime_UTR 40.0%
ACTTGTGCAACAGTAAGTTC+TGG + Chr3:10212930-10212949 None:intergenic 40.0%
AGATGAAACTCGTAAAGGTG+AGG + Chr3:10213686-10213705 None:intergenic 40.0%
AGATTATGAATACCGTCTCG+TGG - Chr3:10213312-10213331 MsG0380012054.01.T01:intron 40.0%
AGCTTATGATCGAAGGAATG+TGG - Chr3:10213246-10213265 MsG0380012054.01.T01:intron 40.0%
AGGAGTCAAATAAGGGTTCT+AGG - Chr3:10212422-10212441 MsG0380012054.01.T01:intron 40.0%
ATATAACAGACCCAACGGAA+AGG + Chr3:10208773-10208792 None:intergenic 40.0%
ATCACGACACAATTTGCACA+GGG - Chr3:10213147-10213166 MsG0380012054.01.T01:intron 40.0%
ATCGATATGGTGCTTCATCT+AGG - Chr3:10213464-10213483 MsG0380012054.01.T01:intron 40.0%
ATTCGAGAGAAATGGAGGAA+TGG + Chr3:10210400-10210419 None:intergenic 40.0%
ATTGGAGACCGAGCATAATA+TGG - Chr3:10211535-10211554 MsG0380012054.01.T01:intron 40.0%
CACTGAGAATAATGTGGATC+AGG - Chr3:10211580-10211599 MsG0380012054.01.T01:intron 40.0%
CCAAAAGACTAGAGTTGTTG+TGG + Chr3:10210219-10210238 None:intergenic 40.0%
CCGAATGTAATCACATGTGT+TGG + Chr3:10207848-10207867 None:intergenic 40.0%
CGAAGACTTTCAACATGAAC+GGG + Chr3:10213361-10213380 None:intergenic 40.0%
CTAACATATGGCGTATCTGA+AGG - Chr3:10210625-10210644 MsG0380012054.01.T01:intron 40.0%
CTCTCATAAGGTTCCCTTAT+AGG + Chr3:10213292-10213311 None:intergenic 40.0%
CTTAAGGCCAAGAAGAAGAA+TGG - Chr3:10212100-10212119 MsG0380012054.01.T01:intron 40.0%
GAAAGGTGAAGCTCAGAATT+TGG - Chr3:10209558-10209577 MsG0380012054.01.T01:CDS 40.0%
GAAGCACAAGGAGTCAAATA+AGG - Chr3:10212414-10212433 MsG0380012054.01.T01:intron 40.0%
GAAGGTCTCAAAATAACAGG+TGG + Chr3:10210334-10210353 None:intergenic 40.0%
GAGAATCAAATGTTACCTCG+TGG - Chr3:10212950-10212969 MsG0380012054.01.T01:intron 40.0%
GATCAAGAAGAGAGCAAGAT+GGG - Chr3:10211791-10211810 MsG0380012054.01.T01:intron 40.0%
GATCGTTATGCCTATCGATA+TGG - Chr3:10213451-10213470 MsG0380012054.01.T01:intron 40.0%
GCATGTTGCATACTTCTTGT+TGG - Chr3:10210670-10210689 MsG0380012054.01.T01:intron 40.0%
GCTGCTATATGGAGTTTACA+AGG - Chr3:10212660-10212679 MsG0380012054.01.T01:intron 40.0%
GGATCAAGAAGAGAACAAGT+TGG - Chr3:10211673-10211692 MsG0380012054.01.T01:intron 40.0%
GGCTTGTATGTATAAGGAAG+CGG - Chr3:10210818-10210837 MsG0380012054.01.T01:intron 40.0%
GGGTGTTTCATCTGCTAAAA+AGG - Chr3:10212579-10212598 MsG0380012054.01.T01:intron 40.0%
GGTAGATGTTGTGTCAAAGT+GGG - Chr3:10210106-10210125 MsG0380012054.01.T01:intron 40.0%
GGTTACTCCACAATCATTGA+AGG - Chr3:10212042-10212061 MsG0380012054.01.T01:intron 40.0%
GTATCTGCATAGTATGGATC+AGG - Chr3:10211472-10211491 MsG0380012054.01.T01:intron 40.0%
GTCCTTAGTTTCATTCTGCT+GGG + Chr3:10212230-10212249 None:intergenic 40.0%
GTGGGTGTATGAGTATATTG+TGG - Chr3:10209658-10209677 MsG0380012054.01.T01:CDS 40.0%
GTTTACAAGGCTTCATCTTC+TGG - Chr3:10212673-10212692 MsG0380012054.01.T01:intron 40.0%
TAAACCAGAGTTGAGTGAGA+AGG - Chr3:10212021-10212040 MsG0380012054.01.T01:intron 40.0%
TAAGGAGAAAAATCAGGAGG+CGG - Chr3:10212258-10212277 MsG0380012054.01.T01:intron 40.0%
TACCCAGCAGAATGAAACTA+AGG - Chr3:10212225-10212244 MsG0380012054.01.T01:intron 40.0%
TAGATACGGTGAAGGTCATT+TGG + Chr3:10211021-10211040 None:intergenic 40.0%
TAGCTGGAAGAAAAAAGAGG+TGG - Chr3:10210153-10210172 MsG0380012054.01.T01:intron 40.0%
TCAAAAGGAAGACATGCCAA+GGG + Chr3:10213768-10213787 None:intergenic 40.0%
TCGATATGGTGCTTCATCTA+GGG - Chr3:10213465-10213484 MsG0380012054.01.T01:intron 40.0%
TGATCAAGAAGAGAGCAAGA+TGG - Chr3:10211790-10211809 MsG0380012054.01.T01:intron 40.0%
TGATGTGTTAGCGTTGTGTT+TGG - Chr3:10208392-10208411 MsG0380012054.01.T01:CDS 40.0%
TGGTAAACTTATCACAACCC+TGG - Chr3:10209582-10209601 MsG0380012054.01.T01:CDS 40.0%
TGGTAGATGTTGTGTCAAAG+TGG - Chr3:10210105-10210124 MsG0380012054.01.T01:intron 40.0%
TTCACACACGTCACTCAAAA+TGG - Chr3:10208354-10208373 MsG0380012054.01.T01:intron 40.0%
TTCATCTAGGGATGCATACT+TGG - Chr3:10213477-10213496 MsG0380012054.01.T01:intron 40.0%
TTCTTCCAGCTACTTGATGT+GGG + Chr3:10210145-10210164 None:intergenic 40.0%
TTGAAAATGCTTTCCGGTAG+CGG + Chr3:10212864-10212883 None:intergenic 40.0%
TTGATCCATGTTATGCTCAG+TGG + Chr3:10211621-10211640 None:intergenic 40.0%
TTTCTTCCAGCTACTTGATG+TGG + Chr3:10210146-10210165 None:intergenic 40.0%
! AGATGAAGCACCATATCGAT+AGG + Chr3:10213464-10213483 None:intergenic 40.0%
! GATTGGCACTGAGAATAATG+TGG - Chr3:10211574-10211593 MsG0380012054.01.T01:intron 40.0%
! TCCTGATTTTTCTCCTTAGG+TGG + Chr3:10212256-10212275 None:intergenic 40.0%
! TTTTCTGATGACTGAGGGTT+AGG + Chr3:10211959-10211978 None:intergenic 40.0%
!! ACTTTTTAGTGGTGCATTGG+TGG - Chr3:10210853-10210872 MsG0380012054.01.T01:intron 40.0%
!! AGTCAAATAAGGGTTCTAGG+AGG - Chr3:10212425-10212444 MsG0380012054.01.T01:intron 40.0%
!! CCACAACAACTCTAGTCTTT+TGG - Chr3:10210216-10210235 MsG0380012054.01.T01:intron 40.0%
!! CTAGTCTTTTGGGTGTATTG+GGG - Chr3:10210227-10210246 MsG0380012054.01.T01:intron 40.0%
!! CTCTAGTCTTTTGGGTGTAT+TGG - Chr3:10210225-10210244 MsG0380012054.01.T01:intron 40.0%
!! CTTTTTAGTGGTGCATTGGT+GGG - Chr3:10210854-10210873 MsG0380012054.01.T01:intron 40.0%
!! GAGTTTGCTATACGTTGATC+GGG - Chr3:10210274-10210293 MsG0380012054.01.T01:intron 40.0%
!! GGAAAAGAGAGAGTACCTTA+GGG + Chr3:10207564-10207583 None:intergenic 40.0%
!! TTTTGGGTGTATTGGGGATT+GGG - Chr3:10210233-10210252 MsG0380012054.01.T01:intron 40.0%
!! TTTTTAGTGGTGCATTGGTG+GGG - Chr3:10210855-10210874 MsG0380012054.01.T01:intron 40.0%
!!! ACCACTTTTTAGTGGTGCAT+TGG - Chr3:10210850-10210869 MsG0380012054.01.T01:intron 40.0%
AAACACCCATGACACGATAG+CGG + Chr3:10212567-10212586 None:intergenic 45.0%
AAAGGACATGTAGAGAACCC+AGG + Chr3:10209274-10209293 None:intergenic 45.0%
AACTAAGGACGAACCACCTA+AGG - Chr3:10212240-10212259 MsG0380012054.01.T01:intron 45.0%
AACTTGCCACCAAAAGCTTG+GGG + Chr3:10212715-10212734 None:intergenic 45.0%
AAGGATACTCTTCCTCCTGA+AGG - Chr3:10211992-10212011 MsG0380012054.01.T01:intron 45.0%
AATTCAAGAAAGGGAGGCTC+CGG - Chr3:10213111-10213130 MsG0380012054.01.T01:intron 45.0%
ACCATCAAGTGCAGCCATAT+CGG - Chr3:10213644-10213663 MsG0380012054.01.T01:intron 45.0%
ACGCCTTTGATCAGAAGTGA+CGG + Chr3:10207788-10207807 None:intergenic 45.0%
AGCTGCAGTGAAGTTTGTGA+TGG + Chr3:10210997-10211016 None:intergenic 45.0%
AGTCAGCGACGAGAATATGA+AGG + Chr3:10213727-10213746 None:intergenic 45.0%
ATAGTTGACGACTTCAGGTG+CGG - Chr3:10212814-10212833 MsG0380012054.01.T01:intron 45.0%
ATCCTCTAAGCACTTCTTCG+CGG - Chr3:10211283-10211302 MsG0380012054.01.T01:intron 45.0%
ATGTTATCAGTCCCGGCAAA+AGG + Chr3:10213556-10213575 None:intergenic 45.0%
CAAATCCCACATCAAGTAGC+TGG - Chr3:10210137-10210156 MsG0380012054.01.T01:intron 45.0%
CAAATGTTCTGCTCCAGGTT+AGG - Chr3:10213011-10213030 MsG0380012054.01.T01:intron 45.0%
CATGAACGGGAACATTGCTT+TGG + Chr3:10213348-10213367 None:intergenic 45.0%
CGATCAAGAAGAGAGTAGGA+TGG - Chr3:10211751-10211770 MsG0380012054.01.T01:intron 45.0%
CGATTCATAGCAATGGCTCT+CGG + Chr3:10211073-10211092 None:intergenic 45.0%
CGTCCTTAGTTTCATTCTGC+TGG + Chr3:10212231-10212250 None:intergenic 45.0%
CTTGGCTCCTTTAAGTAGAG+AGG - Chr3:10213495-10213514 MsG0380012054.01.T01:intron 45.0%
GAAACTTGCCACCAAAAGCT+TGG + Chr3:10212717-10212736 None:intergenic 45.0%
GAAAGCTCTCACAATGCAGA+TGG - Chr3:10212184-10212203 MsG0380012054.01.T01:intron 45.0%
GAAGCAGCAAAAGATAGTCC+AGG + Chr3:10209603-10209622 None:intergenic 45.0%
GAATCAAGAAGAGAGCAGGA+TGG - Chr3:10211712-10211731 MsG0380012054.01.T01:five_prime_UTR 45.0%
GATCAAGAAGAGGCCAAGAT+TGG - Chr3:10211557-10211576 MsG0380012054.01.T01:intron 45.0%
GATCACGACACAATTTGCAC+AGG - Chr3:10213146-10213165 MsG0380012054.01.T01:intron 45.0%
GATGGTCACTGAGCATAACA+TGG - Chr3:10211613-10211632 MsG0380012054.01.T01:intron 45.0%
GATTCTGCTAGATACGGTGA+AGG + Chr3:10211029-10211048 None:intergenic 45.0%
GCTAACACATCAACATCAGC+AGG + Chr3:10208384-10208403 None:intergenic 45.0%
GGAGAGAGATCGTTGAAGAT+AGG - Chr3:10213581-10213600 MsG0380012054.01.T01:intron 45.0%
GGCGGAAAACAATGAAGTGA+AGG - Chr3:10212276-10212295 MsG0380012054.01.T01:intron 45.0%
GGTGAAGCTCAGAATTTGGT+TGG - Chr3:10209562-10209581 MsG0380012054.01.T01:CDS 45.0%
GTAACCTTCTCACTCAACTC+TGG + Chr3:10212028-10212047 None:intergenic 45.0%
GTACCGTCACTTCTGATCAA+AGG - Chr3:10207782-10207801 MsG0380012054.01.T01:CDS 45.0%
GTCAAAAGGAAGACATGCCA+AGG + Chr3:10213769-10213788 None:intergenic 45.0%
GTCAGCGACGAGAATATGAA+GGG + Chr3:10213726-10213745 None:intergenic 45.0%
TACAAGGCTTCATCTTCTGG+TGG - Chr3:10212676-10212695 MsG0380012054.01.T01:intron 45.0%
TCATCTCGTTACTCTTTCGC+TGG - Chr3:10213700-10213719 MsG0380012054.01.T01:intron 45.0%
TCCTATGGAGAAGAGTCATC+AGG - Chr3:10212330-10212349 MsG0380012054.01.T01:intron 45.0%
TCCTGATGACTCTTCTCCAT+AGG + Chr3:10212334-10212353 None:intergenic 45.0%
TCTTTCTTCTGTCCTTCCAC+CGG - Chr3:10207503-10207522 MsG0380012054.01.T01:three_prime_UTR 45.0%
TGAAAATGCTTTCCGGTAGC+GGG + Chr3:10212863-10212882 None:intergenic 45.0%
TGAGTTAACTCACCTCCCTA+AGG - Chr3:10207546-10207565 MsG0380012054.01.T01:three_prime_UTR 45.0%
TGCTGATAGTTGACGACTTC+AGG - Chr3:10212809-10212828 MsG0380012054.01.T01:intron 45.0%
TGTTTCCGCTATCGTGTCAT+GGG - Chr3:10212559-10212578 MsG0380012054.01.T01:intron 45.0%
TTCTGATTCTTTCCCGCTAC+CGG - Chr3:10212848-10212867 MsG0380012054.01.T01:intron 45.0%
TTGTTTCCGCTATCGTGTCA+TGG - Chr3:10212558-10212577 MsG0380012054.01.T01:intron 45.0%
TTTATCGCTGTTGCTGTCCT+GGG - Chr3:10209254-10209273 MsG0380012054.01.T01:CDS 45.0%
! AAGCTTGAACCCCAAGCTTT+TGG - Chr3:10212703-10212722 MsG0380012054.01.T01:intron 45.0%
! ACTAGACTTTTCCGACCAGT+TGG - Chr3:10213040-10213059 MsG0380012054.01.T01:intron 45.0%
! GAAGAGTGAAGAGAAGCACA+AGG - Chr3:10212402-10212421 MsG0380012054.01.T01:intron 45.0%
! GAGTATAGCTCTGCTGTTCA+CGG + Chr3:10213408-10213427 None:intergenic 45.0%
! GCCTCCTGATTTTTCTCCTT+AGG + Chr3:10212259-10212278 None:intergenic 45.0%
! TCTGGTTTACCAGATCCTTC+AGG + Chr3:10212010-10212029 None:intergenic 45.0%
!! AAAGAGAGAGTACCTTAGGG+AGG + Chr3:10207561-10207580 None:intergenic 45.0%
!! ACACGATAGCGGAAACAATC+AGG + Chr3:10212556-10212575 None:intergenic 45.0%
!! CGGAAAAGAGAGAGTACCTT+AGG + Chr3:10207565-10207584 None:intergenic 45.0%
!! CTTTTGGGTGTATTGGGGAT+TGG - Chr3:10210232-10210251 MsG0380012054.01.T01:intron 45.0%
!! GGACTATCTTTTGCTGCTTC+TGG - Chr3:10209603-10209622 MsG0380012054.01.T01:CDS 45.0%
!!! GTTTTCTTGGTGTTCCGTTG+AGG - Chr3:10210427-10210446 MsG0380012054.01.T01:intron 45.0%
!! AAAATATATATCATTAAAAT+AGG + Chr3:10209450-10209469 None:intergenic 5.0%
ACTCTTCCTCCTGAAGGATC+TGG - Chr3:10211998-10212017 MsG0380012054.01.T01:intron 50.0%
ACTGCTGAATGAGCTCCAAC+TGG + Chr3:10213058-10213077 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + Chr3:10211180-10211199 None:intergenic 50.0%
AGGGAGGTGAGTTAACTCAG+AGG + Chr3:10207545-10207564 None:intergenic 50.0%
AGTGGCCACTGAGCATAACA+TGG - Chr3:10211652-10211671 MsG0380012054.01.T01:intron 50.0%
ATTCAAGAAAGGGAGGCTCC+GGG - Chr3:10213112-10213131 MsG0380012054.01.T01:intron 50.0%
CATCAAGTGCAGCCATATCG+GGG - Chr3:10213646-10213665 MsG0380012054.01.T01:intron 50.0%
CATCTGGGGACGCATATAAC+TGG + Chr3:10207921-10207940 None:intergenic 50.0%
CCATCAAGTGCAGCCATATC+GGG - Chr3:10213645-10213664 MsG0380012054.01.T01:intron 50.0%
CCTTCGCATGTTATCAGTCC+CGG + Chr3:10213563-10213582 None:intergenic 50.0%
CTCCCAGCTCGTATTTGGTT+GGG - Chr3:10213524-10213543 MsG0380012054.01.T01:intron 50.0%
CTGAATGAGCTCCAACTGGT+CGG + Chr3:10213054-10213073 None:intergenic 50.0%
CTTTATCGCTGTTGCTGTCC+TGG - Chr3:10209253-10209272 MsG0380012054.01.T01:CDS 50.0%
GATGTTCTACGGATCAAGCC+TGG - Chr3:10212604-10212623 MsG0380012054.01.T01:intron 50.0%
GCGATGGCCTCTCTACTTAA+AGG + Chr3:10213505-10213524 None:intergenic 50.0%
GGATCAAGAAGAGTCCAGAG+TGG - Chr3:10211634-10211653 MsG0380012054.01.T01:intron 50.0%
GGATCAGGAAGAGAGCAAGA+TGG - Chr3:10211487-10211506 MsG0380012054.01.T01:intron 50.0%
GGGGGAACCATTCTTCTTCT+TGG + Chr3:10212110-10212129 None:intergenic 50.0%
GGTTTACCAGATCCTTCAGG+AGG + Chr3:10212007-10212026 None:intergenic 50.0%
GTCTAGTGAGCTTCCTAACC+TGG + Chr3:10213027-10213046 None:intergenic 50.0%
TCCAACTTGTCTCCCCGATA+TGG + Chr3:10213661-10213680 None:intergenic 50.0%
TCCCAGCTCGTATTTGGTTG+GGG - Chr3:10213525-10213544 MsG0380012054.01.T01:intron 50.0%
TCCTCTAAGCACTTCTTCGC+GGG - Chr3:10211284-10211303 MsG0380012054.01.T01:intron 50.0%
TCTCTCTCTCTCTCTCTCTG+TGG - Chr3:10211230-10211249 MsG0380012054.01.T01:intron 50.0%
TGTGATGGCTGTGAAGACCA+AGG + Chr3:10210982-10211001 None:intergenic 50.0%
TTCATAGCAATGGCTCTCGG+TGG + Chr3:10211070-10211089 None:intergenic 50.0%
TTGCACAGGGAAAGAGCTGT+TGG - Chr3:10213160-10213179 MsG0380012054.01.T01:intron 50.0%
! AGGAGAACGAACGAGTTGAC+CGG + Chr3:10207525-10207544 None:intergenic 50.0%
! CTTGAACCCCAAGCTTTTGG+TGG - Chr3:10212706-10212725 MsG0380012054.01.T01:intron 50.0%
! GGCTGCACTTGATGGTAATC+AGG + Chr3:10213640-10213659 None:intergenic 50.0%
!! ACATCAACTTGAGCGTCGAG+AGG - Chr3:10213183-10213202 MsG0380012054.01.T01:intron 50.0%
!! GGAACATTGCTTTGGTAGCG+AGG + Chr3:10213340-10213359 None:intergenic 50.0%
AGAGAGAGAGTAACCTGGGC+AGG + Chr3:10212739-10212758 None:intergenic 55.0%
CAAATACGAGCTGGGAGCGA+TGG + Chr3:10213521-10213540 None:intergenic 55.0%
CATCGCTCCCAGCTCGTATT+TGG - Chr3:10213519-10213538 MsG0380012054.01.T01:intron 55.0%
CCCAGCTCGTATTTGGTTGG+GGG - Chr3:10213526-10213545 MsG0380012054.01.T01:intron 55.0%
CCCCCAACCAAATACGAGCT+GGG + Chr3:10213529-10213548 None:intergenic 55.0%
CCCGATATGGCTGCACTTGA+TGG + Chr3:10213648-10213667 None:intergenic 55.0%
CCGGGACTGATAACATGCGA+AGG - Chr3:10213560-10213579 MsG0380012054.01.T01:intron 55.0%
CCTCTAAGCACTTCTTCGCG+GGG - Chr3:10211285-10211304 MsG0380012054.01.T01:intron 55.0%
GATGGCTGTGAAGACCAAGG+AGG + Chr3:10210979-10210998 None:intergenic 55.0%
GCCATATCGGGGAGACAAGT+TGG - Chr3:10213657-10213676 MsG0380012054.01.T01:intron 55.0%
GCTCCCAGCTCGTATTTGGT+TGG - Chr3:10213523-10213542 MsG0380012054.01.T01:intron 55.0%
GTTATGCTCAGTGGCCACTC+TGG + Chr3:10211651-10211670 None:intergenic 55.0%
TCCCCCAACCAAATACGAGC+TGG + Chr3:10213530-10213549 None:intergenic 55.0%
TCTCTCTCTCTCTCTGTGGC+AGG - Chr3:10211234-10211253 MsG0380012054.01.T01:intron 55.0%
TCTTCGCGGGGTCATCTTTC+TGG - Chr3:10211297-10211316 MsG0380012054.01.T01:intron 55.0%
TGAAGACCAAGGAGGTGGCA+AGG + Chr3:10210971-10210990 None:intergenic 55.0%
! AGAACGAACGAGTTGACCGG+TGG + Chr3:10207522-10207541 None:intergenic 55.0%
! GTTGGGGGAAGACCTTTTGC+CGG - Chr3:10213541-10213560 MsG0380012054.01.T01:intron 55.0%
! TTGGGGGAAGACCTTTTGCC+GGG - Chr3:10213542-10213561 MsG0380012054.01.T01:intron 55.0%
AAGAAAGGGAGGCTCCGGGT+CGG - Chr3:10213116-10213135 MsG0380012054.01.T01:intron 60.0%
CATCTGCCTTGCCACCTCCT+TGG - Chr3:10210962-10210981 MsG0380012054.01.T01:intron 60.0%
GCAATGGCTCTCGGTGGTAG+AGG + Chr3:10211064-10211083 None:intergenic 60.0%
GGCTGTGAAGACCAAGGAGG+TGG + Chr3:10210976-10210995 None:intergenic 60.0%
GGTAGCGAGGTTCCACGAGA+CGG + Chr3:10213327-10213346 None:intergenic 60.0%
TGGTGGCAAGTTTCCTGCCC+AGG - Chr3:10212723-10212742 MsG0380012054.01.T01:intron 60.0%
! CGAACGAGTTGACCGGTGGA+AGG + Chr3:10207518-10207537 None:intergenic 60.0%
!! CCCCGCGAAGAAGTGCTTAG+AGG + Chr3:10211288-10211307 None:intergenic 60.0%
AGAAAGGGAGGCTCCGGGTC+GGG - Chr3:10213117-10213136 MsG0380012054.01.T01:intron 65.0%
CGTGATCCTCTGACCCGACC+CGG + Chr3:10213133-10213152 None:intergenic 65.0%
GAGGCTCCGGGTCGGGTCAG+AGG - Chr3:10213124-10213143 MsG0380012054.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 10207409 10213909 10207409 ID=MsG0380012054.01;Name=MsG0380012054.01
Chr3 mRNA 10207409 10213909 10207409 ID=MsG0380012054.01.T01;Parent=MsG0380012054.01;Name=MsG0380012054.01.T01;_AED=0.32;_eAED=0.32;_QI=269|1|1|1|0.5|0.4|5|165|697
Chr3 exon 10207409 10208290 10207409 ID=MsG0380012054.01.T01:exon:1616;Parent=MsG0380012054.01.T01
Chr3 exon 10208371 10208487 10208371 ID=MsG0380012054.01.T01:exon:1615;Parent=MsG0380012054.01.T01
Chr3 exon 10208574 10209877 10208574 ID=MsG0380012054.01.T01:exon:1614;Parent=MsG0380012054.01.T01
Chr3 exon 10211694 10211759 10211694 ID=MsG0380012054.01.T01:exon:1613;Parent=MsG0380012054.01.T01
Chr3 exon 10213751 10213909 10213751 ID=MsG0380012054.01.T01:exon:1612;Parent=MsG0380012054.01.T01
Chr3 five_prime_UTR 10213751 10213909 10213751 ID=MsG0380012054.01.T01:five_prime_utr;Parent=MsG0380012054.01.T01
Chr3 five_prime_UTR 10211694 10211759 10211694 ID=MsG0380012054.01.T01:five_prime_utr;Parent=MsG0380012054.01.T01
Chr3 five_prime_UTR 10209834 10209877 10209834 ID=MsG0380012054.01.T01:five_prime_utr;Parent=MsG0380012054.01.T01
Chr3 CDS 10208574 10209833 10208574 ID=MsG0380012054.01.T01:cds;Parent=MsG0380012054.01.T01
Chr3 CDS 10208371 10208487 10208371 ID=MsG0380012054.01.T01:cds;Parent=MsG0380012054.01.T01
Chr3 CDS 10207574 10208290 10207574 ID=MsG0380012054.01.T01:cds;Parent=MsG0380012054.01.T01
Chr3 three_prime_UTR 10207409 10207573 10207409 ID=MsG0380012054.01.T01:three_prime_utr;Parent=MsG0380012054.01.T01
Gene Sequence

>MsG0380012054.01.T01

ATGGATCAGGAAGAGAGCAAGATGAGCAACGTTGATCAAGAAGAGAGCAAATTGGAGACCGAGCATAATATGGATCAAGAAGAGGCCAAGATTGGCACTGAGAATAATGTGGATCAGGAAGAGAGCAAGATGGTCACTGAGCATAACATGGATCAAGAAGAGTCCAGAGTGGCCACTGAGCATAACATGGATCAAGAAGAGAACAAGTTGGGCACTGAGAATAACTTGAATCAAGAAGAGAGCAGGATGGACACTGAGCATAACATCGATCAAGAAGAGAGTAGGATGGACACTGAGCATAACATTGATCAAGAAGAGAGCAAGATGGGCACTGAGACTCATCCTGAATTTTCTTCTAATCCTAATCCTCATAACATCGATCAAGAAGAGAGTAGGATGGATACTGAGCATAACATTGATCAAGAAGAGAGCAAGATGGGCACTGAGACTCATCCTGAATTTTCTTCTAATCCTAACCCTCAGTCATCAGAAAATGATGACAACAAGAAGGATACTCTTCCTCCTGAAGGATCTGGTAAACCAGAGTTGAGTGAGAAGGTTACTCCACAATCATTGAAGGCAAAAAAAATTGTTAAGAAATCTCTGGTTCCTAAACTTAAGGCCAAGAAGAAGAATGGTTCCCCCAAGATTGTGAAGAAGAAAATAAAGAGGAAGAACAAAAAAGTAGGGGACAATGCTGAAAGCTCTCACAATGCAGATGGGAAACTAATTTCAGACAGTACCCAGCAGAATGAAACTAAGGACGAACCACCTAAGGAGAAAAATCAGGAGGCGGAAAACAATGAAGTGAAGGTAAGTCAGAATAGGAGCAGTAATGACAAAAGTCCTATGGAGAAGAGTCATCAGGATGAAAAAGATAAGGAGATCAATCTGTTGGATAAGACTGAACAAGAACAGAAGAGTGAAGAGAAGCACAAGGAGTCAAATAAGGGTTCTAGGAGGAGAAAAAACAAAAACAAGACAAATGGCACGGAAAAGAGTCCATCAAATGACAAAAAGAGTGAAAAGCTTGGTGGTCTCATCTTTATGTGCAGTGCTAAGACAAAGCCTGATTGTTTCCGCTATCGTGTCATGGGTGTTTCATCTGCTAAAAAGGATGATGTTCTACGGATCAAGCCTGGACTTAAGCTCTTTCTTTATGATTTTAATCTGAAGCTGCTATATGGAGTTTACAAGGCTTCATCTTCTGGTGGCTTGAAGCTTGAACCCCAAGCTTTTGGTGGCAAGTTTCCTGCCCAGGTGCGGTTCAATATTATTTCTGATTCTTTCCCGCTACCGGAAAGCATTTTCAAAAAGGCTATCAAGGATAATTATAACGCAAAGAACAAGTTCAAACCAGAACTTACTGTTGCACAAGTTAGGAAGCTCACTAGACTTTTCCGACCAGTTGGAGCTCATTCAGCAGTGCAGCAGCCCATTTTTTCTCATCCAAAAGCAATAATTCAAGAAAGGGAGGCTCCGGGTCGGGTCAGAGGATCACGACACAATTTGCACAGGGAAAGAGCTGTTGGACATCAACTTGAGCGTCGAGAGGATATTCCCCATGATTCATTTCTTTTGGAGAATAATTATCGAGCTTATGATCGAAGGAATGTGGCTGCTACTTCTCATGTTAATCCTATAAGGGAACCTTATGAGAGAGATTATGAATACCGTCTCGTGGAACCTCGCTACCAAAGCAATGTTCCCGTTCATGTTGAAAGTCTTCGAAGGGATCCCATTTATTTGAATGACCGTGAACAGCAGAGCTATACTCGTGTTGTTCCTGACCATATAGATGATCGTTATGCCTATCGATATGGTGCTTCATCTAGGGATGCATACTTGGCTCCTTTAAGTAGAGAGGCCATCGCTCCCAGCTCGTATTTGGTTGGGGGAAGACCTTTTGCCGGGACTGATAACATGCGAAGGAGAGAGATCGTTGAAGATAGGCATTACTCAATATATTCTGCTGCTGATGCTTTACCTGATTACCATCAAGTGCAGCCATATCGGGGAGACAAGTTGGAAGCCTCACCTTTACGAGTTTCATCTCGTTACTCTTTCGCTGGCCCTTCATATTCTCGTCGCTGA
Protein sequence

>MsG0380012054.01.T01

MDQEESKMSNVDQEESKLETEHNMDQEEAKIGTENNVDQEESKMVTEHNMDQEESRVATEHNMDQEENKLGTENNLNQEESRMDTEHNIDQEESRMDTEHNIDQEESKMGTETHPEFSSNPNPHNIDQEESRMDTEHNIDQEESKMGTETHPEFSSNPNPQSSENDDNKKDTLPPEGSGKPELSEKVTPQSLKAKKIVKKSLVPKLKAKKKNGSPKIVKKKIKRKNKKVGDNAESSHNADGKLISDSTQQNETKDEPPKEKNQEAENNEVKVSQNRSSNDKSPMEKSHQDEKDKEINLLDKTEQEQKSEEKHKESNKGSRRRKNKNKTNGTEKSPSNDKKSEKLGGLIFMCSAKTKPDCFRYRVMGVSSAKKDDVLRIKPGLKLFLYDFNLKLLYGVYKASSSGGLKLEPQAFGGKFPAQVRFNIISDSFPLPESIFKKAIKDNYNAKNKFKPELTVAQVRKLTRLFRPVGAHSAVQQPIFSHPKAIIQEREAPGRVRGSRHNLHRERAVGHQLERREDIPHDSFLLENNYRAYDRRNVAATSHVNPIREPYERDYEYRLVEPRYQSNVPVHVESLRRDPIYLNDREQQSYTRVVPDHIDDRYAYRYGASSRDAYLAPLSREAIAPSSYLVGGRPFAGTDNMRRREIVEDRHYSIYSAADALPDYHQVQPYRGDKLEASPLRVSSRYSFAGPSYSRR*