AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022861.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022861.01.T01 MTR_3g462710 57.092 564 237 4 25 586 4 564 0.0 677
MsG0480022861.01.T01 MTR_7g067010 54.885 563 249 5 25 586 4 562 0.0 654
MsG0480022861.01.T01 MTR_4g015080 52.465 568 263 6 24 588 11 574 0.0 638
MsG0480022861.01.T01 MTR_3g462710 56.114 458 196 4 131 586 1 455 0.0 528
MsG0480022861.01.T01 MTR_7g098200 43.640 566 307 3 22 582 6 564 6.64e-179 519
MsG0480022861.01.T01 MTR_7g098200 43.463 566 298 4 22 582 6 554 2.99e-175 509
MsG0480022861.01.T01 MTR_7g098160 43.162 563 308 4 25 582 13 568 3.68e-173 504
MsG0480022861.01.T01 MTR_7g098180 42.908 564 309 5 25 582 11 567 8.30e-173 503
MsG0480022861.01.T01 MTR_7g098090 42.456 570 311 5 23 582 11 573 1.94e-169 495
MsG0480022861.01.T01 MTR_1g075440 41.563 563 317 3 25 582 8 563 1.46e-168 492
MsG0480022861.01.T01 MTR_7g098040 42.096 563 314 4 25 582 14 569 9.30e-168 491
MsG0480022861.01.T01 MTR_1g041835 42.934 559 310 2 27 582 9 561 2.30e-167 489
MsG0480022861.01.T01 MTR_1g041815 42.755 559 311 2 27 582 9 561 5.88e-165 483
MsG0480022861.01.T01 MTR_7g098220 42.281 570 317 3 18 582 3 565 5.08e-164 481
MsG0480022861.01.T01 MTR_3g112460 43.036 560 304 5 31 588 9 555 9.25e-164 479
MsG0480022861.01.T01 MTR_5g014150 42.152 567 322 4 22 583 21 586 1.87e-162 477
MsG0480022861.01.T01 MTR_3g072300 41.519 566 324 4 25 588 4 564 4.74e-160 470
MsG0480022861.01.T01 MTR_4g098800 42.105 570 317 6 19 583 12 573 4.22e-159 468
MsG0480022861.01.T01 MTR_4g098800 42.059 573 319 6 16 583 74 638 1.51e-158 469
MsG0480022861.01.T01 MTR_3g112470 41.964 560 310 5 31 588 9 555 3.64e-158 465
MsG0480022861.01.T01 MTR_1g042310 39.893 559 328 3 27 582 8 561 3.14e-157 463
MsG0480022861.01.T01 MTR_7g098230 41.011 534 303 4 54 582 35 561 7.01e-157 462
MsG0480022861.01.T01 MTR_3g112450 42.068 561 308 7 31 587 9 556 3.94e-155 457
MsG0480022861.01.T01 MTR_3g069420 40.917 567 326 6 21 585 10 569 2.15e-154 456
MsG0480022861.01.T01 MTR_3g069500 41.270 567 316 6 20 585 10 560 1.62e-152 451
MsG0480022861.01.T01 MTR_7g010820 41.593 565 321 5 29 586 10 572 2.20e-152 451
MsG0480022861.01.T01 MTR_1g041875 39.668 542 312 3 27 565 11 540 1.23e-151 449
MsG0480022861.01.T01 MTR_7g088825 38.163 566 341 7 25 585 4 565 4.02e-150 446
MsG0480022861.01.T01 MTR_7g088820 39.122 547 324 7 34 575 16 558 6.69e-150 444
MsG0480022861.01.T01 MTR_5g055000 39.781 548 324 5 43 586 16 561 4.26e-149 442
MsG0480022861.01.T01 MTR_7g098220 42.776 526 289 3 62 582 3 521 1.23e-148 440
MsG0480022861.01.T01 MTR_5g012270 41.812 574 323 8 23 588 7 577 2.33e-148 440
MsG0480022861.01.T01 MTR_3g005010 41.115 574 297 8 22 588 7 546 2.99e-148 439
MsG0480022861.01.T01 MTR_7g005930 38.298 564 331 5 22 583 19 567 1.23e-147 438
MsG0480022861.01.T01 MTR_1g116930 39.115 565 330 8 22 583 2 555 2.19e-147 438
MsG0480022861.01.T01 MTR_5g012290 41.156 571 326 6 23 586 6 573 1.23e-146 436
MsG0480022861.01.T01 MTR_7g065080 40.989 566 319 7 22 586 8 559 1.53e-146 436
MsG0480022861.01.T01 MTR_7g088790 37.895 570 339 8 22 585 12 572 4.75e-144 430
MsG0480022861.01.T01 MTR_1g042310 39.504 524 309 3 62 582 6 524 1.19e-143 427
MsG0480022861.01.T01 MTR_4g033325 40.806 571 301 9 22 582 3 546 1.34e-143 427
MsG0480022861.01.T01 MTR_4g019580 39.716 564 331 6 24 586 15 570 1.93e-143 428
MsG0480022861.01.T01 MTR_3g069440 41.113 557 319 6 31 585 19 568 2.93e-143 427
MsG0480022861.01.T01 MTR_4g101380 41.565 575 316 10 26 586 8 576 2.45e-142 425
MsG0480022861.01.T01 MTR_7g013270 39.344 549 321 5 39 583 84 624 4.69e-142 426
MsG0480022861.01.T01 MTR_1g042310 39.272 522 309 3 64 582 1 517 5.99e-142 422
MsG0480022861.01.T01 MTR_0294s0020 40.526 570 304 8 22 582 3 546 2.64e-141 421
MsG0480022861.01.T01 MTR_7g098150 44.176 455 242 4 25 474 13 460 6.72e-139 412
MsG0480022861.01.T01 MTR_1g041885 38.780 508 296 3 64 568 1 496 5.38e-138 412
MsG0480022861.01.T01 MTR_4g033315 39.029 556 311 7 31 582 17 548 2.98e-136 408
MsG0480022861.01.T01 MTR_4g033310 39.029 556 311 7 31 582 17 548 2.98e-136 408
MsG0480022861.01.T01 MTR_7g088820 38.889 504 301 6 87 585 5 506 3.80e-135 404
MsG0480022861.01.T01 MTR_4g033330 39.029 556 306 8 21 567 2 533 3.44e-134 402
MsG0480022861.01.T01 MTR_4g114340 40.493 568 323 7 24 586 3 560 6.88e-134 403
MsG0480022861.01.T01 MTR_2g017750 36.998 573 347 7 25 583 14 586 5.39e-129 391
MsG0480022861.01.T01 MTR_4g107580 35.751 579 343 9 22 585 9 573 2.86e-128 389
MsG0480022861.01.T01 MTR_7g098200 40.700 457 259 3 131 582 1 450 5.49e-128 385
MsG0480022861.01.T01 MTR_5g085850 38.502 574 328 6 18 585 2 556 7.39e-128 388
MsG0480022861.01.T01 MTR_8g038880 39.344 549 305 7 47 586 22 551 1.11e-127 387
MsG0480022861.01.T01 MTR_7g006540 38.087 554 324 7 44 583 62 610 1.19e-127 389
MsG0480022861.01.T01 MTR_4g033375 39.087 504 280 8 31 530 18 498 6.02e-127 382
MsG0480022861.01.T01 MTR_4g033395 38.492 504 283 8 31 530 18 498 1.72e-126 381
MsG0480022861.01.T01 MTR_4g107510 35.223 582 353 7 22 587 13 586 5.05e-125 380
MsG0480022861.01.T01 MTR_3g014790 36.508 567 326 9 31 586 5 548 1.73e-124 378
MsG0480022861.01.T01 MTR_4g107530 35.932 590 345 11 11 586 12 582 1.95e-123 377
MsG0480022861.01.T01 MTR_3g100980 36.709 553 332 5 39 585 10 550 7.36e-123 374
MsG0480022861.01.T01 MTR_8g087780 37.696 573 340 8 26 583 2 572 7.65e-123 375
MsG0480022861.01.T01 MTR_5g038060 35.473 592 357 9 3 585 2 577 1.53e-122 375
MsG0480022861.01.T01 MTR_2g005130 36.177 586 339 9 2 582 5 560 3.93e-122 373
MsG0480022861.01.T01 MTR_8g469480 37.112 547 330 7 49 585 42 584 1.59e-121 372
MsG0480022861.01.T01 MTR_7g088820 38.667 450 269 6 131 575 1 448 5.12e-120 364
MsG0480022861.01.T01 MTR_8g103233 36.823 554 337 7 35 582 7 553 1.38e-119 366
MsG0480022861.01.T01 MTR_8g469470 34.412 587 359 8 15 588 11 584 1.67e-119 366
MsG0480022861.01.T01 MTR_3g100980 34.940 581 332 6 39 585 10 578 1.13e-116 359
MsG0480022861.01.T01 MTR_7g065080 39.588 485 278 7 103 586 2 472 2.69e-115 352
MsG0480022861.01.T01 MTR_8g087810 36.237 574 348 8 26 583 2 573 6.15e-114 352
MsG0480022861.01.T01 MTR_1g009200 34.555 573 355 7 20 584 6 566 1.39e-110 343
MsG0480022861.01.T01 MTR_1g026740 36.299 562 346 6 31 586 2 557 2.86e-110 342
MsG0480022861.01.T01 MTR_5g038190 33.453 559 356 7 37 585 16 568 2.89e-110 342
MsG0480022861.01.T01 MTR_4g033325 39.301 458 246 8 130 582 18 448 5.71e-110 337
MsG0480022861.01.T01 MTR_4g107670 32.812 576 356 8 31 587 10 573 1.12e-109 340
MsG0480022861.01.T01 MTR_1g026750 35.979 567 338 10 34 587 5 559 2.28e-109 339
MsG0480022861.01.T01 MTR_8g469310 34.622 569 343 6 32 583 13 569 7.64e-109 338
MsG0480022861.01.T01 MTR_4g033325 39.863 439 241 7 149 582 2 422 8.84e-109 333
MsG0480022861.01.T01 MTR_2g101640 35.135 555 344 9 38 584 18 564 2.29e-107 336
MsG0480022861.01.T01 MTR_5g038380 34.520 562 356 7 31 583 14 572 3.13e-107 334
MsG0480022861.01.T01 MTR_2g101650 34.418 584 345 10 10 584 11 565 4.08e-107 334
MsG0480022861.01.T01 MTR_7g111260 33.883 546 342 6 43 585 17 546 1.53e-106 332
MsG0480022861.01.T01 MTR_4g033385 36.980 457 261 8 130 582 16 449 1.75e-105 326
MsG0480022861.01.T01 MTR_2g101590 34.495 574 349 10 21 584 11 567 3.71e-105 330
MsG0480022861.01.T01 MTR_1g085090 32.264 561 359 8 30 585 2 546 9.22e-105 328
MsG0480022861.01.T01 MTR_2g101610 34.146 574 352 10 21 584 11 568 1.25e-104 329
MsG0480022861.01.T01 MTR_4g107610 33.982 565 353 10 22 575 7 562 1.18e-103 326
MsG0480022861.01.T01 MTR_1g057460 33.898 590 348 15 8 584 6 566 6.95e-103 323
MsG0480022861.01.T01 MTR_1g026770 35.209 551 335 8 47 587 17 555 1.12e-102 322
MsG0480022861.01.T01 MTR_7g064780 32.566 565 369 7 24 580 5 565 6.93e-101 318
MsG0480022861.01.T01 MTR_4g011280 33.048 584 356 13 22 584 2 571 1.02e-100 318
MsG0480022861.01.T01 MTR_4g024930 33.913 575 337 11 20 583 11 553 1.26e-100 317
MsG0480022861.01.T01 MTR_7g098210 34.791 526 249 9 64 582 1 439 4.75e-100 311
MsG0480022861.01.T01 MTR_2g101560 33.217 575 356 10 21 584 11 568 3.65e-99 315
MsG0480022861.01.T01 MTR_4g123537 32.399 571 359 9 20 586 24 571 1.68e-97 310
MsG0480022861.01.T01 MTR_7g064800 32.990 582 366 9 11 582 2 569 1.16e-96 307
MsG0480022861.01.T01 MTR_1g057460 35.318 487 288 10 103 584 31 495 2.09e-93 296
MsG0480022861.01.T01 MTR_0236s0050 35.246 488 287 11 103 584 31 495 2.18e-88 283
MsG0480022861.01.T01 MTR_6g008690 33.036 560 322 10 50 588 12 539 4.47e-87 280
MsG0480022861.01.T01 MTR_2g093640 29.772 571 356 10 31 583 2 545 4.02e-78 257
MsG0480022861.01.T01 MTR_2g093180 30.742 566 358 9 31 583 2 546 2.65e-77 255
MsG0480022861.01.T01 MTR_2g093160 30.319 564 362 8 31 583 2 545 3.09e-77 255
MsG0480022861.01.T01 MTR_7g052600 28.029 553 361 7 30 582 10 525 8.04e-66 224
MsG0480022861.01.T01 MTR_4g033310 38.406 276 161 3 309 582 216 484 2.81e-65 222
MsG0480022861.01.T01 MTR_4g033310 45.604 182 90 2 31 212 17 189 9.29e-42 157
MsG0480022861.01.T01 MTR_7g051830 27.698 556 357 6 31 582 11 525 6.74e-65 221
MsG0480022861.01.T01 MTR_7g051880 28.442 552 358 8 31 582 11 525 9.01e-65 221
MsG0480022861.01.T01 MTR_1g009170 31.920 401 215 8 170 564 9 357 4.46e-60 205
MsG0480022861.01.T01 MTR_3g065350 33.962 159 99 1 354 512 1 153 5.86e-27 107
MsG0480022861.01.T01 MTR_4g033390 39.759 83 50 0 500 582 30 112 1.18e-15 73.9
MsG0480022861.01.T01 MTR_7g064160 30.833 120 74 2 20 139 7 117 2.57e-14 70.1
MsG0480022861.01.T01 MTR_8g091265 35.345 116 71 4 315 426 3 118 1.92e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022861.01.T01 AT2G02040 65.921 581 195 1 11 588 4 584 0.0 829
MsG0480022861.01.T01 AT1G62200 57.718 596 235 3 1 587 2 589 0.0 726
MsG0480022861.01.T01 AT1G62200 55.200 625 234 4 1 587 16 632 0.0 712
MsG0480022861.01.T01 AT1G62200 55.200 625 234 4 1 587 2 618 0.0 711
MsG0480022861.01.T01 AT3G54140 55.258 561 248 3 28 587 7 565 0.0 671
MsG0480022861.01.T01 AT3G54140 55.258 561 248 3 28 587 7 565 0.0 671
MsG0480022861.01.T01 AT2G02020 54.422 588 222 6 1 586 1 544 0.0 651
MsG0480022861.01.T01 AT5G01180 53.345 568 261 4 22 588 2 566 0.0 650
MsG0480022861.01.T01 AT5G01180 53.345 568 261 4 22 588 2 566 0.0 650
MsG0480022861.01.T01 AT5G01180 53.345 568 261 4 22 588 2 566 0.0 650
MsG0480022861.01.T01 AT2G02020 51.107 587 222 8 1 586 1 523 0.0 588
MsG0480022861.01.T01 AT1G32450 39.931 581 335 8 14 584 7 583 4.31e-156 461
MsG0480022861.01.T01 AT5G46050 40.734 545 310 5 26 565 8 544 8.96e-155 457
MsG0480022861.01.T01 AT2G40460 41.113 557 315 4 28 582 7 552 1.64e-152 451
MsG0480022861.01.T01 AT4G21680 40.949 569 321 7 29 587 12 575 2.07e-152 451
MsG0480022861.01.T01 AT1G68570 41.652 569 322 7 25 585 2 568 5.52e-150 445
MsG0480022861.01.T01 AT1G68570 42.509 534 302 5 57 585 5 538 1.04e-147 438
MsG0480022861.01.T01 AT5G46040 38.971 544 319 5 27 565 9 544 2.62e-147 437
MsG0480022861.01.T01 AT3G53960 39.469 565 332 5 24 585 16 573 3.33e-145 433
MsG0480022861.01.T01 AT2G26690 40.767 574 314 7 24 587 3 560 1.08e-142 426
MsG0480022861.01.T01 AT2G37900 38.121 564 336 4 18 580 10 561 8.53e-141 421
MsG0480022861.01.T01 AT1G22540 39.247 558 313 7 33 586 18 553 7.79e-138 412
MsG0480022861.01.T01 AT1G12110 41.250 560 317 5 35 586 17 572 3.07e-136 409
MsG0480022861.01.T01 AT3G54450 36.661 551 325 7 43 586 10 543 3.80e-135 405
MsG0480022861.01.T01 AT5G19640 38.376 542 313 7 46 584 60 583 7.02e-135 407
MsG0480022861.01.T01 AT2G26690 40.850 541 294 7 57 587 3 527 2.99e-133 400
MsG0480022861.01.T01 AT1G72140 38.750 560 301 8 33 582 22 549 4.76e-132 397
MsG0480022861.01.T01 AT2G26690 40.755 530 288 7 68 587 2 515 7.92e-130 391
MsG0480022861.01.T01 AT1G22550 36.797 587 335 7 9 586 1 560 4.25e-127 385
MsG0480022861.01.T01 AT1G22570 38.605 588 324 12 9 586 1 561 3.53e-126 383
MsG0480022861.01.T01 AT1G59740 36.475 573 345 9 15 580 12 572 2.85e-125 381
MsG0480022861.01.T01 AT1G69870 36.842 551 337 6 42 585 48 594 9.50e-125 381
MsG0480022861.01.T01 AT5G13400 37.943 564 329 7 36 585 55 611 1.73e-124 380
MsG0480022861.01.T01 AT1G72120 37.828 571 319 9 25 586 10 553 9.40e-123 374
MsG0480022861.01.T01 AT1G72125 37.610 569 327 11 25 586 10 557 4.42e-120 367
MsG0480022861.01.T01 AT2G37900 36.917 493 299 3 88 580 2 482 5.73e-118 359
MsG0480022861.01.T01 AT3G21670 37.993 558 316 8 31 577 12 550 1.02e-117 362
MsG0480022861.01.T01 AT1G72130 36.738 558 300 9 42 588 21 536 1.92e-117 359
MsG0480022861.01.T01 AT5G46050 40.227 440 250 5 131 565 1 432 4.30e-117 356
MsG0480022861.01.T01 AT1G52190 34.370 579 356 8 19 584 1 568 1.55e-115 357
MsG0480022861.01.T01 AT1G22570 38.632 541 302 10 56 586 4 524 3.85e-115 353
MsG0480022861.01.T01 AT1G18880 34.783 552 339 9 48 585 22 566 1.05e-114 354
MsG0480022861.01.T01 AT3G16180 35.420 559 343 9 38 584 15 567 1.05e-113 351
MsG0480022861.01.T01 AT1G33440 34.806 566 343 9 26 582 19 567 2.48e-112 348
MsG0480022861.01.T01 AT1G69850 34.722 576 362 5 22 583 2 577 3.64e-111 345
MsG0480022861.01.T01 AT1G27040 34.035 570 353 4 25 583 2 559 3.28e-110 342
MsG0480022861.01.T01 AT1G27040 33.989 559 351 3 31 583 9 555 4.74e-110 341
MsG0480022861.01.T01 AT5G62680 32.143 588 376 10 13 585 13 592 9.99e-105 329
MsG0480022861.01.T01 AT1G27040 34.275 531 331 3 59 583 9 527 3.75e-104 325
MsG0480022861.01.T01 AT5G28470 32.163 541 352 9 42 575 14 546 5.47e-103 323
MsG0480022861.01.T01 AT1G27080 33.515 549 345 8 47 588 16 551 5.65e-102 320
MsG0480022861.01.T01 AT3G47960 32.601 592 377 12 8 585 25 608 1.53e-100 318
MsG0480022861.01.T01 AT5G28470 32.163 541 350 10 42 575 14 544 1.68e-100 316
MsG0480022861.01.T01 AT5G14940 33.574 554 326 10 50 585 12 541 2.34e-99 313
MsG0480022861.01.T01 AT1G69860 32.224 571 361 9 24 588 2 552 3.49e-97 307
MsG0480022861.01.T01 AT5G62730 31.866 568 363 7 21 582 33 582 1.66e-96 306
MsG0480022861.01.T01 AT1G72130 36.866 434 230 7 159 582 13 412 3.41e-92 290
MsG0480022861.01.T01 AT1G72130 36.866 434 230 7 159 582 13 412 3.41e-92 290
MsG0480022861.01.T01 AT1G27080 32.692 520 330 8 76 588 3 509 1.12e-90 290
MsG0480022861.01.T01 AT5G62730 31.784 538 344 7 51 582 3 523 1.82e-90 289
MsG0480022861.01.T01 AT3G01350 32.136 557 336 9 50 583 12 549 1.93e-90 290
MsG0480022861.01.T01 AT3G45650 31.206 564 357 10 29 586 6 544 9.00e-89 285
MsG0480022861.01.T01 AT3G45680 31.083 563 352 11 29 583 6 540 1.39e-84 275
MsG0480022861.01.T01 AT3G45650 30.000 590 356 11 29 586 6 570 9.72e-84 273
MsG0480022861.01.T01 AT3G45710 30.906 563 355 14 29 583 6 542 4.37e-83 271
MsG0480022861.01.T01 AT3G45660 31.459 569 350 13 31 586 2 543 9.13e-81 265
MsG0480022861.01.T01 AT3G45660 31.459 569 350 13 31 586 2 543 9.13e-81 265
MsG0480022861.01.T01 AT3G45660 31.459 569 350 13 31 586 23 564 1.60e-80 264
MsG0480022861.01.T01 AT3G25260 29.455 550 341 11 35 582 11 515 1.38e-79 260
MsG0480022861.01.T01 AT3G45700 30.642 545 344 12 47 586 18 533 8.23e-79 259
MsG0480022861.01.T01 AT3G45720 30.515 544 339 12 53 586 27 541 2.75e-75 250
MsG0480022861.01.T01 AT3G25280 29.464 560 334 13 35 582 11 521 9.74e-75 248
MsG0480022861.01.T01 AT3G45690 27.993 543 320 14 47 583 20 497 3.00e-62 214
MsG0480022861.01.T01 AT5G11570 38.662 269 153 4 316 582 218 476 2.06e-45 167
MsG0480022861.01.T01 AT5G11570 35.526 228 136 6 53 273 21 244 1.89e-35 139
MsG0480022861.01.T01 AT2G38100 27.481 524 325 14 73 582 2 484 2.20e-45 168
MsG0480022861.01.T01 AT2G38100 27.481 524 325 14 73 582 18 500 6.12e-45 167
MsG0480022861.01.T01 AT2G38100 27.481 524 325 14 73 582 24 506 7.08e-45 167

Find 178 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTTCATTGTGGATATTT+TGG 0.053577 4:+77669161 MsG0480022861.01.T01:three_prime_UTR
TGGAATTCCTGCTTTATTTA+TGG 0.096605 4:+77666905 MsG0480022861.01.T01:CDS
CTTCTTTGGTTTGTATATTT+TGG 0.118525 4:-77669075 None:intergenic
TAAGAGCAGGCCTTTGTTTA+TGG 0.199120 4:-77665995 None:intergenic
TGATTCGTATGTTTCCAATT+TGG 0.233990 4:+77668391 MsG0480022861.01.T01:CDS
ACCTGGCACAATCTTGTAAT+AGG 0.241807 4:-77666993 None:intergenic
GGAATTCCTGCTTTATTTAT+GGG 0.253875 4:+77666906 MsG0480022861.01.T01:CDS
ATCCCTCAGTATTTAATATT+AGG 0.262760 4:+77668777 MsG0480022861.01.T01:CDS
GATTCGTATGTTTCCAATTT+GGG 0.263077 4:+77668392 MsG0480022861.01.T01:CDS
TGTCCCTTGTTCAAGTTATC+TGG 0.266075 4:-77668984 None:intergenic
CCTATTGTGAAGAAATTTAC+AGG 0.267930 4:+77668588 MsG0480022861.01.T01:CDS
GCAGGATGGGGCCTTGGATT+TGG 0.276776 4:+77666885 MsG0480022861.01.T01:CDS
TAAAAGATACCTAGAATAAA+TGG 0.281058 4:-77666047 None:intergenic
GCAGAAATATTTACATTTGT+TGG 0.285112 4:+77668804 MsG0480022861.01.T01:CDS
AGAGCTTGTCCATTTATTCT+AGG 0.287397 4:+77666038 MsG0480022861.01.T01:CDS
AAATCTTAAGAAGCCTTCTT+TGG 0.293145 4:-77669089 None:intergenic
TGCGAACGTTTGGCTTTCTT+TGG 0.293248 4:+77666285 MsG0480022861.01.T01:CDS
GAGATTGTGGATGGATAGTA+TGG 0.295263 4:+77669200 MsG0480022861.01.T01:three_prime_UTR
TCTCAAAAGCTCAATGCTTT+TGG 0.297982 4:+77669433 MsG0480022861.01.T01:three_prime_UTR
TTTCAATTAAGCGATATATA+TGG 0.316983 4:-77665716 None:intergenic
ACCTCTCATTGCAGCTATTC+TGG 0.319469 4:+77666410 MsG0480022861.01.T01:CDS
TGCAAAGCCCAGAAATAAAA+AGG 0.326946 4:-77668653 None:intergenic
ATTGAAATAGGAAGCCTTCT+TGG 0.327582 4:-77666793 None:intergenic
CCTGTAAATTTCTTCACAAT+AGG 0.330087 4:-77668588 None:intergenic
AAAGCGTGTGTGCTATCTTT+TGG 0.335037 4:+77666732 MsG0480022861.01.T01:CDS
TATTCTGGCCGATGGTTACT+TGG 0.340187 4:+77666425 MsG0480022861.01.T01:CDS
AAAGTAATACCAATTGAAAT+AGG 0.347915 4:-77666805 None:intergenic
TAAACAAAGGCCTGCTCTTA+AGG 0.348845 4:+77665998 MsG0480022861.01.T01:CDS
ATGATGCCAGTAGCCCAAAT+TGG 0.364708 4:-77668405 None:intergenic
CAATGAATGTTGCGAACGTT+TGG 0.367805 4:+77666275 MsG0480022861.01.T01:CDS
GACAGGAATTCAACAACTTA+TGG 0.371450 4:+77669394 MsG0480022861.01.T01:three_prime_UTR
AGCCTTCTTGGCACTTTCCT+TGG 0.373744 4:-77666781 None:intergenic
ATATTGAATTGGAATTGAAA+TGG 0.375464 4:-77669570 None:intergenic
CCTGCTCTTAAGGCCAATAC+TGG 0.377119 4:+77666008 MsG0480022861.01.T01:CDS
CAAGAAGGCTCGCTTAATAA+AGG 0.378992 4:-77669518 None:intergenic
GACAATGCAGGATGGGGCCT+TGG 0.379565 4:+77666879 MsG0480022861.01.T01:CDS
TCAACTCCGGATTTCTTGTC+AGG 0.382025 4:-77667083 None:intergenic
TATTGAATTGGAATTGAAAT+GGG 0.388644 4:-77669569 None:intergenic
CAGAAATATTTACATTTGTT+GGG 0.398237 4:+77668805 MsG0480022861.01.T01:CDS
CCACAAACAATGTTGACATC+TGG 0.399405 4:-77668446 None:intergenic
ATGTTTCCAATTTGGGCTAC+TGG 0.399600 4:+77668399 MsG0480022861.01.T01:CDS
TCAAAGGTTGAGAGGGAAGC+TGG 0.404522 4:-77668516 None:intergenic
AGAAGGCTTCCTATTTCAAT+TGG 0.409243 4:+77666796 MsG0480022861.01.T01:CDS
TCACGAACAACCTCTTCTTC+AGG 0.414049 4:+77665796 MsG0480022861.01.T01:CDS
GGAGAACCAGATTCTGCTTC+CGG 0.414175 4:-77667031 None:intergenic
CCTGGCACAATCTTGTAATA+GGG 0.415915 4:-77666992 None:intergenic
ATCTGTCCGGAAGCAGAATC+TGG 0.425911 4:+77667025 MsG0480022861.01.T01:CDS
CTGTACCCCTTAGTGTGTTA+TGG 0.427430 4:+77668751 MsG0480022861.01.T01:CDS
GTTGAAGCCAGATGAGTGTT+TGG 0.427808 4:+77666623 MsG0480022861.01.T01:CDS
CCAGATGTCAACATTGTTTG+TGG 0.429124 4:+77668446 MsG0480022861.01.T01:CDS
AGCTTCCCTCTCAACCTTTG+AGG 0.429340 4:+77668518 MsG0480022861.01.T01:CDS
AGAAATTTACAGGCAAGAAA+AGG 0.429742 4:+77668598 MsG0480022861.01.T01:CDS
ATTTCTGTGTTTCAAAGAAT+AGG 0.432543 4:+77668624 MsG0480022861.01.T01:CDS
TTAAGGCCAATACTGGCAAT+TGG 0.433009 4:+77666015 MsG0480022861.01.T01:CDS
CCCTATTACAAGATTGTGCC+AGG 0.433016 4:+77666992 MsG0480022861.01.T01:CDS
GAAATTTACAGGCAAGAAAA+GGG 0.443467 4:+77668599 MsG0480022861.01.T01:CDS
AAATTGGAAACATACGAATC+AGG 0.450240 4:-77668389 None:intergenic
CTGCGAGAAATGTCAGCATC+TGG 0.450518 4:+77666367 MsG0480022861.01.T01:CDS
TCTTGTCAGGCGTCTCAAAC+AGG 0.451021 4:-77667070 None:intergenic
TACGTAATTGCGCTAGGGAC+TGG 0.451552 4:+77666702 MsG0480022861.01.T01:CDS
CTAATACTCACATAATATCA+TGG 0.451587 4:+77665739 MsG0480022861.01.T01:exon
CGTTCACGACGACCACATTC+CGG 0.452670 4:+77665766 MsG0480022861.01.T01:CDS
GTGTTTCAAAGAATAGGAAT+TGG 0.456937 4:+77668630 MsG0480022861.01.T01:CDS
GTAACTTACTTCACAACAAA+AGG 0.460447 4:+77668942 MsG0480022861.01.T01:CDS
GATATTTCCTTCTTTCATTG+TGG 0.461722 4:+77669152 MsG0480022861.01.T01:three_prime_UTR
CATATAGTCCGCATAGCATC+TGG 0.463480 4:-77668855 None:intergenic
GATTCAAGACAATGCAGGAT+GGG 0.465637 4:+77666872 MsG0480022861.01.T01:CDS
ATGGTTACTTGGGACGATAC+TGG 0.467902 4:+77666436 MsG0480022861.01.T01:CDS
CTACTTATAAGTTCATTCAA+TGG 0.471255 4:+77669356 MsG0480022861.01.T01:three_prime_UTR
TTGAAGCCAGATGAGTGTTT+GGG 0.471733 4:+77666624 MsG0480022861.01.T01:CDS
CCAGTATTGGCCTTAAGAGC+AGG 0.473677 4:-77666008 None:intergenic
ACAAGTATCTTGTCGTAGAC+GGG 0.478376 4:-77668564 None:intergenic
AGCTCTCCAATTGCCAGTAT+TGG 0.480747 4:-77666021 None:intergenic
ATTAAGCGATATATATGGAC+TGG 0.481421 4:-77665711 None:intergenic
CTTGTAATAGGGCTACCCTT+TGG 0.487759 4:-77666981 None:intergenic
GGTCTCTACGTAATTGCGCT+AGG 0.492844 4:+77666696 MsG0480022861.01.T01:CDS
AGTGAACCCAAACACTCATC+TGG 0.495580 4:-77666630 None:intergenic
GCGATATATATGGACTGGAT+TGG 0.497565 4:-77665706 None:intergenic
AACTGTGAAAGCTGAATCGC+TGG 0.498358 4:+77669303 MsG0480022861.01.T01:three_prime_UTR
GGATTTGCCATAACACACTA+AGG 0.499620 4:-77668758 None:intergenic
ACACTAAGGGGTACAGCCAC+AGG 0.502306 4:-77668744 None:intergenic
CAAAGGTTGAGAGGGAAGCT+GGG 0.504001 4:-77668515 None:intergenic
TGGAGCATCATGATGATCTC+AGG 0.504326 4:+77667120 MsG0480022861.01.T01:CDS
AGCAGCTGTAGTATCCGATT+CGG 0.504407 4:+77668296 MsG0480022861.01.T01:CDS
CTCGCTTAATAAAGGACAAA+GGG 0.505434 4:-77669510 None:intergenic
CATTACAACAAAGTAAATCA+TGG 0.506661 4:-77666475 None:intergenic
TTTGGGTTCACTATGTCCTC+CGG 0.508190 4:+77666641 MsG0480022861.01.T01:CDS
ACAACAAAAGGAGGAAGACT+TGG 0.509228 4:+77668954 MsG0480022861.01.T01:CDS
AACAGGAGACTACTATCCTC+AGG 0.509378 4:-77667053 None:intergenic
GAGACGCCTGACAAGAAATC+CGG 0.510155 4:+77667077 MsG0480022861.01.T01:CDS
CAATTCCTCCACCTGTGTCA+CGG 0.510764 4:-77668361 None:intergenic
CACAAACAATGTTGACATCT+GGG 0.511425 4:-77668445 None:intergenic
CAAAATATACAAACCAAAGA+AGG 0.515826 4:+77669076 MsG0480022861.01.T01:CDS
GAATTCAACAACTTATGGTA+TGG 0.519366 4:+77669399 MsG0480022861.01.T01:three_prime_UTR
GGTTGTTCGTGATCGTGTAC+CGG 0.519891 4:-77665785 None:intergenic
CACTCATCTGGCTTCAACAG+TGG 0.520698 4:-77666618 None:intergenic
AAAATATCCACAATGAAAGA+AGG 0.528032 4:-77669159 None:intergenic
GTCACGGTGCAAAGCCTCCA+TGG 0.531249 4:-77668345 None:intergenic
AACAAGTATCTTGTCGTAGA+CGG 0.532226 4:-77668565 None:intergenic
TCAACATTGTTTGTGGAGCA+AGG 0.532978 4:+77668453 MsG0480022861.01.T01:CDS
AAGTTTGTTGCTCTTAGGAG+TGG 0.538354 4:+77669118 MsG0480022861.01.T01:three_prime_UTR
GTTTCTGAAACCTGTAGAGA+GGG 0.538434 4:-77666959 None:intergenic
TATGGACTGGATTGGATGGA+TGG 0.538521 4:-77665698 None:intergenic
TCGAAAAGTAGATGAGATTG+TGG 0.540072 4:+77669187 MsG0480022861.01.T01:three_prime_UTR
GATAATCCCATAAATAAAGC+AGG 0.540709 4:-77666912 None:intergenic
GCTGAATCGCTGGCATTGAA+AGG 0.541526 4:+77669313 MsG0480022861.01.T01:three_prime_UTR
GAGAAGAGAACCTGAAGAAG+AGG 0.543692 4:-77665806 None:intergenic
TACAGGTTTCAGAAACCAAA+GGG 0.544294 4:+77666966 MsG0480022861.01.T01:CDS
CATGTTAGCAGCTGCTGTTG+TGG 0.545786 4:+77668674 MsG0480022861.01.T01:CDS
GGAAGCTGGGGATAATTTGA+AGG 0.546419 4:-77668502 None:intergenic
TTGTGGTAAGATAGGTAACA+AGG 0.546662 4:-77666320 None:intergenic
TTCCAAGGAAAGTGCCAAGA+AGG 0.547469 4:+77666779 MsG0480022861.01.T01:CDS
AAAGTAGATGAGATTGTGGA+TGG 0.549741 4:+77669191 MsG0480022861.01.T01:three_prime_UTR
TTATTTATGGGATTATCCGT+TGG 0.551032 4:+77666918 MsG0480022861.01.T01:CDS
GTTTGATGATACTGATTCCA+AGG 0.551604 4:+77666764 MsG0480022861.01.T01:CDS
GGCATGATGATCAAGCAGAC+AGG 0.552281 4:+77669377 MsG0480022861.01.T01:three_prime_UTR
ATTCTGGCCGATGGTTACTT+GGG 0.552684 4:+77666426 MsG0480022861.01.T01:CDS
GCGGTGACTATTCTAATCCA+TGG 0.556004 4:+77668328 MsG0480022861.01.T01:CDS
CTACAGGTTTCAGAAACCAA+AGG 0.559426 4:+77666965 MsG0480022861.01.T01:CDS
TATATATGGACTGGATTGGA+TGG 0.564440 4:-77665702 None:intergenic
CGGAATGTGGTCGTCGTGAA+CGG 0.566939 4:-77665765 None:intergenic
TTTGTTGCTCTTAGGAGTGG+AGG 0.571360 4:+77669121 MsG0480022861.01.T01:three_prime_UTR
TTCCCTCTCAACCTTTGAGG+TGG 0.571535 4:+77668521 MsG0480022861.01.T01:CDS
GTCTCTACGTAATTGCGCTA+GGG 0.572081 4:+77666697 MsG0480022861.01.T01:CDS
TTGCACCGTGACACAGGTGG+AGG 0.574960 4:+77668356 MsG0480022861.01.T01:CDS
ATTGCAGCTATTCTGGCCGA+TGG 0.575012 4:+77666417 MsG0480022861.01.T01:CDS
TAATACTCACATAATATCAT+GGG 0.578355 4:+77665740 MsG0480022861.01.T01:exon
CATCATGCAGCCTCATTGTG+TGG 0.578856 4:+77666850 MsG0480022861.01.T01:CDS
GGATTCAAGACAATGCAGGA+TGG 0.578946 4:+77666871 MsG0480022861.01.T01:CDS
GAACAAGAATACACAGGAGA+TGG 0.582165 4:+77665963 MsG0480022861.01.T01:CDS
ATTCCAGATAACTTGAACAA+GGG 0.582218 4:+77668981 MsG0480022861.01.T01:CDS
AACAACACTTGCCACCTCAA+AGG 0.582967 4:-77668532 None:intergenic
CAAAAGGAGGAAGACTTGGA+TGG 0.583585 4:+77668958 MsG0480022861.01.T01:CDS
ATTCAAGACAATGCAGGATG+GGG 0.583923 4:+77666873 MsG0480022861.01.T01:CDS
TAGAACACAAAATATTGCAT+AGG 0.584359 4:-77666669 None:intergenic
CTCCTAATATTAAATACTGA+GGG 0.584551 4:-77668779 None:intergenic
AAGCAGGAATTCCAAATCCA+AGG 0.587055 4:-77666896 None:intergenic
GGTTTCTGAAACCTGTAGAG+AGG 0.588416 4:-77666960 None:intergenic
CGTGATCGTGTACCGGAATG+TGG 0.591076 4:-77665778 None:intergenic
TGCCACCTCAAAGGTTGAGA+GGG 0.591195 4:-77668523 None:intergenic
AAATATTGCATAGGAGCCGC+CGG 0.595536 4:-77666660 None:intergenic
GAGGCTTTGCACCGTGACAC+AGG 0.596884 4:+77668350 MsG0480022861.01.T01:CDS
GCTCGCTTAATAAAGGACAA+AGG 0.603228 4:-77669511 None:intergenic
CAGCCACAGGTTTATCAACA+AGG 0.606423 4:-77668731 None:intergenic
GGACAGATGCTAACAAAACC+TGG 0.610265 4:-77667010 None:intergenic
TTGCCACCTCAAAGGTTGAG+AGG 0.611965 4:-77668524 None:intergenic
TAAAATAATTATCTATAACA+TGG 0.614929 4:-77669240 None:intergenic
AGAAATGTCAGCATCTGGCA+AGG 0.615451 4:+77666372 MsG0480022861.01.T01:CDS
GCTCCTAATATTAAATACTG+AGG 0.619987 4:-77668780 None:intergenic
TGTCTTGAATCCACACAATG+AGG 0.623245 4:-77666860 None:intergenic
GATTTGCCATAACACACTAA+GGG 0.627430 4:-77668757 None:intergenic
GCTTTGCACCGTGACACAGG+TGG 0.629149 4:+77668353 MsG0480022861.01.T01:CDS
GTGTGGATTCAAGACAATGC+AGG 0.633297 4:+77666867 MsG0480022861.01.T01:CDS
GCCTAAAATGAAACTTCCAA+CGG 0.633868 4:-77666934 None:intergenic
TGTGGAGCAAGGAACTATGA+TGG 0.634977 4:+77668464 MsG0480022861.01.T01:CDS
ACTTACTTCACAACAAAAGG+AGG 0.635977 4:+77668945 MsG0480022861.01.T01:CDS
GATGCTATGCGGACTATATG+TGG 0.636243 4:+77668858 MsG0480022861.01.T01:CDS
GTATCGTCCCAAGTAACCAT+CGG 0.636260 4:-77666433 None:intergenic
ACAGGAGACTACTATCCTCA+GGG 0.640615 4:-77667052 None:intergenic
GCCAGAATAGCTGCAATGAG+AGG 0.641879 4:-77666411 None:intergenic
GATTCCAGATAACTTGAACA+AGG 0.643108 4:+77668980 MsG0480022861.01.T01:CDS
AGATTGTGGATGGATAGTAT+GGG 0.643461 4:+77669201 MsG0480022861.01.T01:three_prime_UTR
CAAGTATCTTGTCGTAGACG+GGG 0.650024 4:-77668563 None:intergenic
AAAGGTTGAGAGGGAAGCTG+GGG 0.653126 4:-77668514 None:intergenic
GTAATTGCGCTAGGGACTGG+TGG 0.653890 4:+77666705 MsG0480022861.01.T01:CDS
AAATTTACAGGCAAGAAAAG+GGG 0.654749 4:+77668600 MsG0480022861.01.T01:CDS
TCCGATTCGGAGAAAAGAAG+CGG 0.660741 4:+77668309 MsG0480022861.01.T01:CDS
TGACCTTGTTGATAAACCTG+TGG 0.663498 4:+77668728 MsG0480022861.01.T01:CDS
ATTTGCCATAACACACTAAG+GGG 0.669324 4:-77668756 None:intergenic
GCAGAATCTGGTTCTCCCTG+AGG 0.674304 4:+77667037 MsG0480022861.01.T01:CDS
GGGTTCACTATGTCCTCCGG+CGG 0.677499 4:+77666644 MsG0480022861.01.T01:CDS
GTTCAGTTGACCATAAACAA+AGG 0.680704 4:+77665985 MsG0480022861.01.T01:CDS
TTTCTGAAACCTGTAGAGAG+GGG 0.692125 4:-77666958 None:intergenic
ACGAACGAACAAGAATACAC+AGG 0.699716 4:+77665957 MsG0480022861.01.T01:CDS
TGCATGATGCAATAGCACCT+AGG 0.710226 4:-77666836 None:intergenic
TATTGCATAGGAGCCGCCGG+AGG 0.714438 4:-77666657 None:intergenic
AAGAATCACCAGATGCTATG+CGG 0.727183 4:+77668847 MsG0480022861.01.T01:CDS
GTGACTATTCTAATCCATGG+AGG 0.730666 4:+77668331 MsG0480022861.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATTATTACTAATATGA+AGG - Chr4:77665877-77665896 None:intergenic 10.0%
!! TAAAATAATTATCTATAACA+TGG - Chr4:77669243-77669262 None:intergenic 10.0%
!!! GTTATAGATAATTATTTTAA+TGG + Chr4:77669244-77669263 MsG0480022861.01.T01:three_prime_UTR 10.0%
!! AACAATACATTATTATTAGT+AGG - Chr4:77668149-77668168 None:intergenic 15.0%
!! ATATACATCATACATAAATT+AGG - Chr4:77667563-77667582 None:intergenic 15.0%
!! TATACATCATACATAAATTA+GGG - Chr4:77667562-77667581 None:intergenic 15.0%
!!! GTTGACATTTTTTATAAAAA+AGG + Chr4:77668119-77668138 MsG0480022861.01.T01:intron 15.0%
!! AAAGTAATACCAATTGAAAT+AGG - Chr4:77666808-77666827 None:intergenic 20.0%
!! ACATAACAGAAAGAAATATA+AGG - Chr4:77666090-77666109 None:intergenic 20.0%
!! CAGAAATATTTACATTTGTT+GGG + Chr4:77668805-77668824 MsG0480022861.01.T01:CDS 20.0%
!! CATAACAGAAAGAAATATAA+GGG - Chr4:77666089-77666108 None:intergenic 20.0%
!! TAAAAGATACCTAGAATAAA+TGG - Chr4:77666050-77666069 None:intergenic 20.0%
!! TAACAAGTAATGTAAACTTA+CGG - Chr4:77667636-77667655 None:intergenic 20.0%
!! TAATACTCACATAATATCAT+GGG + Chr4:77665740-77665759 MsG0480022861.01.T01:exon 20.0%
!! TTACTTATAATCATTTGATG+AGG + Chr4:77667653-77667672 MsG0480022861.01.T01:intron 20.0%
!! TTTAATATGTCATACTGATA+TGG + Chr4:77666549-77666568 MsG0480022861.01.T01:intron 20.0%
!! TTTCAATTAAGCGATATATA+TGG - Chr4:77665719-77665738 None:intergenic 20.0%
!!! AACAATATTTTCTTACAAGA+AGG - Chr4:77669536-77669555 None:intergenic 20.0%
!!! ATTCAATCAATTTTTTCCAA+GGG + Chr4:77667900-77667919 MsG0480022861.01.T01:intron 20.0%
!!! TATTACTTTTCTATATACCT+AGG + Chr4:77666819-77666838 MsG0480022861.01.T01:CDS 20.0%
!!! TATTATTTTCTGCTTTTATC+TGG + Chr4:77669014-77669033 MsG0480022861.01.T01:CDS 20.0%
!!! TATTCAATCAATTTTTTCCA+AGG + Chr4:77667899-77667918 MsG0480022861.01.T01:intron 20.0%
! AAAATATCCACAATGAAAGA+AGG - Chr4:77669162-77669181 None:intergenic 25.0%
! AAAATCTGATTTCAGTATAC+TGG - Chr4:77667963-77667982 None:intergenic 25.0%
! AGAAGAAATGTATGTATCTT+AGG - Chr4:77666503-77666522 None:intergenic 25.0%
! ATCCCTCAGTATTTAATATT+AGG + Chr4:77668777-77668796 MsG0480022861.01.T01:CDS 25.0%
! ATTTCTGTGTTTCAAAGAAT+AGG + Chr4:77668624-77668643 MsG0480022861.01.T01:CDS 25.0%
! CAAAATATACAAACCAAAGA+AGG + Chr4:77669076-77669095 MsG0480022861.01.T01:CDS 25.0%
! CATTACAACAAAGTAAATCA+TGG - Chr4:77666478-77666497 None:intergenic 25.0%
! CGAAGAAATGAAAAAGAATA+AGG - Chr4:77665839-77665858 None:intergenic 25.0%
! CGTTTATGTATGTAAATTAC+AGG + Chr4:77666252-77666271 MsG0480022861.01.T01:intron 25.0%
! CTAATACTCACATAATATCA+TGG + Chr4:77665739-77665758 MsG0480022861.01.T01:exon 25.0%
! CTACTTATAAGTTCATTCAA+TGG + Chr4:77669356-77669375 MsG0480022861.01.T01:three_prime_UTR 25.0%
! CTCCTAATATTAAATACTGA+GGG - Chr4:77668782-77668801 None:intergenic 25.0%
! GAAATGAAAAAGAATAAGGA+AGG - Chr4:77665835-77665854 None:intergenic 25.0%
! GATTGAATAAAACTAGTTCA+TGG - Chr4:77667888-77667907 None:intergenic 25.0%
! GCAGAAATATTTACATTTGT+TGG + Chr4:77668804-77668823 MsG0480022861.01.T01:CDS 25.0%
! GGTTCAATTATATCATGAAA+TGG - Chr4:77667541-77667560 None:intergenic 25.0%
! TAGAACACAAAATATTGCAT+AGG - Chr4:77666672-77666691 None:intergenic 25.0%
! TATAGGAGTTGTTTATGTTT+GGG + Chr4:77667337-77667356 MsG0480022861.01.T01:intron 25.0%
! TCAATTATATCATGAAATGG+AGG - Chr4:77667538-77667557 None:intergenic 25.0%
! TTATAATCATTTGATGAGGA+AGG + Chr4:77667657-77667676 MsG0480022861.01.T01:intron 25.0%
! TTATAGGAGTTGTTTATGTT+TGG + Chr4:77667336-77667355 MsG0480022861.01.T01:intron 25.0%
! TTATTTCAAAACACCAAGAA+AGG - Chr4:77668262-77668281 None:intergenic 25.0%
!! CAATATTTTGTGTTCTACTT+GGG + Chr4:77666675-77666694 MsG0480022861.01.T01:CDS 25.0%
!! TTCTTTCATTGTGGATATTT+TGG + Chr4:77669161-77669180 MsG0480022861.01.T01:three_prime_UTR 25.0%
!!! CTTCTTTGGTTTGTATATTT+TGG - Chr4:77669078-77669097 None:intergenic 25.0%
!!! TTAAAAGTGTTCTTAAGCTA+GGG - Chr4:77668192-77668211 None:intergenic 25.0%
!!! TTCTTGGTGTTTTGAAATAA+AGG + Chr4:77668262-77668281 MsG0480022861.01.T01:intron 25.0%
AAACACACACATACATACAT+TGG - Chr4:77667468-77667487 None:intergenic 30.0%
AAATCTTAAGAAGCCTTCTT+TGG - Chr4:77669092-77669111 None:intergenic 30.0%
AAATTGGAAACATACGAATC+AGG - Chr4:77668392-77668411 None:intergenic 30.0%
AAATTTACAGGCAAGAAAAG+GGG + Chr4:77668600-77668619 MsG0480022861.01.T01:CDS 30.0%
AACACACACATACATACATT+GGG - Chr4:77667467-77667486 None:intergenic 30.0%
AGAAATTTACAGGCAAGAAA+AGG + Chr4:77668598-77668617 MsG0480022861.01.T01:CDS 30.0%
AGATACTCCTTTGTCTATAT+TGG - Chr4:77667206-77667225 None:intergenic 30.0%
AGGTTTAGAAGGTTGTTAAT+AGG - Chr4:77668229-77668248 None:intergenic 30.0%
ATTAAGCGATATATATGGAC+TGG - Chr4:77665714-77665733 None:intergenic 30.0%
ATTCCAGATAACTTGAACAA+GGG + Chr4:77668981-77669000 MsG0480022861.01.T01:CDS 30.0%
CATTGTTCCAATATAGACAA+AGG + Chr4:77667196-77667215 MsG0480022861.01.T01:intron 30.0%
CATTTGTCTGATATCAAATG+TGG + Chr4:77667267-77667286 MsG0480022861.01.T01:intron 30.0%
CCCAATGAAAAATTAAGAAG+CGG - Chr4:77668891-77668910 None:intergenic 30.0%
CCTATTGTGAAGAAATTTAC+AGG + Chr4:77668588-77668607 MsG0480022861.01.T01:CDS 30.0%
CCTGTAAATTTCTTCACAAT+AGG - Chr4:77668591-77668610 None:intergenic 30.0%
CGAAATAGGGCTAAAAAAAT+AGG + Chr4:77667418-77667437 MsG0480022861.01.T01:intron 30.0%
CTTTGTCTATATTGGAACAA+TGG - Chr4:77667198-77667217 None:intergenic 30.0%
GAAATTTACAGGCAAGAAAA+GGG + Chr4:77668599-77668618 MsG0480022861.01.T01:CDS 30.0%
GAATTCAACAACTTATGGTA+TGG + Chr4:77669399-77669418 MsG0480022861.01.T01:three_prime_UTR 30.0%
GATAATCCCATAAATAAAGC+AGG - Chr4:77666915-77666934 None:intergenic 30.0%
GATATTTCCTTCTTTCATTG+TGG + Chr4:77669152-77669171 MsG0480022861.01.T01:three_prime_UTR 30.0%
GATTCGTATGTTTCCAATTT+GGG + Chr4:77668392-77668411 MsG0480022861.01.T01:CDS 30.0%
GCTCCTAATATTAAATACTG+AGG - Chr4:77668783-77668802 None:intergenic 30.0%
GGATAAATCCAATGACATTA+AGG - Chr4:77667177-77667196 None:intergenic 30.0%
GTAACTTACTTCACAACAAA+AGG + Chr4:77668942-77668961 MsG0480022861.01.T01:CDS 30.0%
GTGTTTCAAAGAATAGGAAT+TGG + Chr4:77668630-77668649 MsG0480022861.01.T01:CDS 30.0%
GTTTATGTTTGGGTCTAATT+TGG + Chr4:77667347-77667366 MsG0480022861.01.T01:intron 30.0%
TACAATACATGATACACAAC+TGG - Chr4:77667714-77667733 None:intergenic 30.0%
TGAAAAAGAATAAGGAAGGA+AGG - Chr4:77665831-77665850 None:intergenic 30.0%
TGATTCGTATGTTTCCAATT+TGG + Chr4:77668391-77668410 MsG0480022861.01.T01:CDS 30.0%
TGTAAAGACTATTATTGACC+AGG - Chr4:77666526-77666545 None:intergenic 30.0%
TGTTCGTATCTTAGAATTTG+TGG + Chr4:77666131-77666150 MsG0480022861.01.T01:intron 30.0%
TTATTTATGGGATTATCCGT+TGG + Chr4:77666918-77666937 MsG0480022861.01.T01:CDS 30.0%
! AACTCCTATAACATTTTGCA+GGG - Chr4:77667327-77667346 None:intergenic 30.0%
! CATATAATTGACTCCTAATC+TGG + Chr4:77667807-77667826 MsG0480022861.01.T01:intron 30.0%
! CCGCTTCTTAATTTTTCATT+GGG + Chr4:77668888-77668907 MsG0480022861.01.T01:CDS 30.0%
! CGCTTCTTAATTTTTCATTG+GGG + Chr4:77668889-77668908 MsG0480022861.01.T01:CDS 30.0%
! GCAATATTTTGTGTTCTACT+TGG + Chr4:77666674-77666693 MsG0480022861.01.T01:CDS 30.0%
! GTGTAATTTTGTGGTAAGAT+AGG - Chr4:77666331-77666350 None:intergenic 30.0%
! TCTCAAATAATTTTCACCCT+TGG - Chr4:77667919-77667938 None:intergenic 30.0%
!! AGAACACTTTTAACTACAAC+AGG + Chr4:77668199-77668218 MsG0480022861.01.T01:intron 30.0%
!! GAACACTTTTAACTACAACA+GGG + Chr4:77668200-77668219 MsG0480022861.01.T01:intron 30.0%
!! GGAATTCCTGCTTTATTTAT+GGG + Chr4:77666906-77666925 MsG0480022861.01.T01:CDS 30.0%
!! GTTAAAAGTGTTCTTAAGCT+AGG - Chr4:77668193-77668212 None:intergenic 30.0%
!! GTTACTTTCGTGTAATTTTG+TGG - Chr4:77666340-77666359 None:intergenic 30.0%
!! TCAAAAAGTTTGTTGCTCTT+AGG + Chr4:77669113-77669132 MsG0480022861.01.T01:three_prime_UTR 30.0%
!! TCATCTTTGACAGTTTTGTA+GGG + Chr4:77668023-77668042 MsG0480022861.01.T01:intron 30.0%
!! TGGAATTCCTGCTTTATTTA+TGG + Chr4:77666905-77666924 MsG0480022861.01.T01:CDS 30.0%
!!! GAATTGGCCTTTTTATTTCT+GGG + Chr4:77668646-77668665 MsG0480022861.01.T01:CDS 30.0%
!!! GATGAGTATTTTGACTCTTT+CGG + Chr4:77666587-77666606 MsG0480022861.01.T01:CDS 30.0%
!!! TGTATTTTAATTCCGATGAC+TGG + Chr4:77667685-77667704 MsG0480022861.01.T01:intron 30.0%
!!! TTAGTCAGACTTCTAGTTTT+AGG + Chr4:77667380-77667399 MsG0480022861.01.T01:intron 30.0%
AAAGTAGATGAGATTGTGGA+TGG + Chr4:77669191-77669210 MsG0480022861.01.T01:three_prime_UTR 35.0%
AACAAGTATCTTGTCGTAGA+CGG - Chr4:77668568-77668587 None:intergenic 35.0%
ACACCAAGAAAGGACAAAAA+AGG - Chr4:77668252-77668271 None:intergenic 35.0%
ACTTACTTCACAACAAAAGG+AGG + Chr4:77668945-77668964 MsG0480022861.01.T01:CDS 35.0%
AGAAGGCTTCCTATTTCAAT+TGG + Chr4:77666796-77666815 MsG0480022861.01.T01:CDS 35.0%
AGAGCTTGTCCATTTATTCT+AGG + Chr4:77666038-77666057 MsG0480022861.01.T01:CDS 35.0%
AGATGACAATATTCGTTCAG+TGG - Chr4:77668009-77668028 None:intergenic 35.0%
AGATTGTGGATGGATAGTAT+GGG + Chr4:77669201-77669220 MsG0480022861.01.T01:three_prime_UTR 35.0%
AGGCAATCTCTCATCAAATT+TGG + Chr4:77666200-77666219 MsG0480022861.01.T01:intron 35.0%
AGTTGAAAAAAGTCGCAAAC+TGG + Chr4:77667100-77667119 MsG0480022861.01.T01:CDS 35.0%
AGTTTCTGCCTTAATGTCAT+TGG + Chr4:77667166-77667185 MsG0480022861.01.T01:intron 35.0%
ATTGAAATAGGAAGCCTTCT+TGG - Chr4:77666796-77666815 None:intergenic 35.0%
ATTTGCCATAACACACTAAG+GGG - Chr4:77668759-77668778 None:intergenic 35.0%
CACAAACAATGTTGACATCT+GGG - Chr4:77668448-77668467 None:intergenic 35.0%
CATTTCAAACAGTCCAGATT+AGG - Chr4:77667823-77667842 None:intergenic 35.0%
CTCGCTTAATAAAGGACAAA+GGG - Chr4:77669513-77669532 None:intergenic 35.0%
GACAAAAAAGGAGGTTTAGA+AGG - Chr4:77668240-77668259 None:intergenic 35.0%
GACAGGAATTCAACAACTTA+TGG + Chr4:77669394-77669413 MsG0480022861.01.T01:three_prime_UTR 35.0%
GATACATACATTTCTTCTCC+TGG + Chr4:77666505-77666524 MsG0480022861.01.T01:intron 35.0%
GATTCCAGATAACTTGAACA+AGG + Chr4:77668980-77668999 MsG0480022861.01.T01:CDS 35.0%
GATTTGCCATAACACACTAA+GGG - Chr4:77668760-77668779 None:intergenic 35.0%
GCCTAAAATGAAACTTCCAA+CGG - Chr4:77666937-77666956 None:intergenic 35.0%
GGCAATCTCTCATCAAATTT+GGG + Chr4:77666201-77666220 MsG0480022861.01.T01:intron 35.0%
GGGCTAAAAAAATAGGATCA+AGG + Chr4:77667425-77667444 MsG0480022861.01.T01:intron 35.0%
GTATCTTAGAATTTGTGGCT+GGG + Chr4:77666136-77666155 MsG0480022861.01.T01:intron 35.0%
GTTCAGTTGACCATAAACAA+AGG + Chr4:77665985-77666004 MsG0480022861.01.T01:CDS 35.0%
TACAGGTTTCAGAAACCAAA+GGG + Chr4:77666966-77666985 MsG0480022861.01.T01:CDS 35.0%
TCGAAAAGTAGATGAGATTG+TGG + Chr4:77669187-77669206 MsG0480022861.01.T01:three_prime_UTR 35.0%
TCTGATTTCAGTATACTGGA+AGG - Chr4:77667959-77667978 None:intergenic 35.0%
TGCAAAGCCCAGAAATAAAA+AGG - Chr4:77668656-77668675 None:intergenic 35.0%
TGTATGTGTGTGTTTGTTTG+TGG + Chr4:77667473-77667492 MsG0480022861.01.T01:intron 35.0%
TTGTGGTAAGATAGGTAACA+AGG - Chr4:77666323-77666342 None:intergenic 35.0%
! AAAAGCTCAATGCTTTTGGT+TGG + Chr4:77669437-77669456 MsG0480022861.01.T01:three_prime_UTR 35.0%
! CAACTCCTATAACATTTTGC+AGG - Chr4:77667328-77667347 None:intergenic 35.0%
! GCCGCTTCTTAATTTTTCAT+TGG + Chr4:77668887-77668906 MsG0480022861.01.T01:CDS 35.0%
! TCCGTTGGAAGTTTCATTTT+AGG + Chr4:77666933-77666952 MsG0480022861.01.T01:CDS 35.0%
! TCTCAAAAGCTCAATGCTTT+TGG + Chr4:77669433-77669452 MsG0480022861.01.T01:three_prime_UTR 35.0%
!! AAGGAGTATCTTGCATATGT+TGG + Chr4:77667215-77667234 MsG0480022861.01.T01:intron 35.0%
!! GTCATCTTTGACAGTTTTGT+AGG + Chr4:77668022-77668041 MsG0480022861.01.T01:intron 35.0%
!! GTTTGATGATACTGATTCCA+AGG + Chr4:77666764-77666783 MsG0480022861.01.T01:CDS 35.0%
!! TATATATGGACTGGATTGGA+TGG - Chr4:77665705-77665724 None:intergenic 35.0%
!! TGATATGGTTGTTTCTTGCA+GGG + Chr4:77666564-77666583 MsG0480022861.01.T01:intron 35.0%
!!! GGAATTGGCCTTTTTATTTC+TGG + Chr4:77668645-77668664 MsG0480022861.01.T01:CDS 35.0%
!!! TTCTAGTTTTAGGACCTGTT+CGG + Chr4:77667390-77667409 MsG0480022861.01.T01:intron 35.0%
!!! TTTGCGACTTTTTTCAACTC+CGG - Chr4:77667099-77667118 None:intergenic 35.0%
AAGAATCACCAGATGCTATG+CGG + Chr4:77668847-77668866 MsG0480022861.01.T01:CDS 40.0%
AAGCAGGAATTCCAAATCCA+AGG - Chr4:77666899-77666918 None:intergenic 40.0%
ACAACAAAAGGAGGAAGACT+TGG + Chr4:77668954-77668973 MsG0480022861.01.T01:CDS 40.0%
ACAAGTATCTTGTCGTAGAC+GGG - Chr4:77668567-77668586 None:intergenic 40.0%
ACCTGGCACAATCTTGTAAT+AGG - Chr4:77666996-77667015 None:intergenic 40.0%
ACGAACGAACAAGAATACAC+AGG + Chr4:77665957-77665976 MsG0480022861.01.T01:CDS 40.0%
ACTCTTCATCACCTTACAAG+CGG - Chr4:77666176-77666195 None:intergenic 40.0%
ATGTTTCCAATTTGGGCTAC+TGG + Chr4:77668399-77668418 MsG0480022861.01.T01:CDS 40.0%
ATTCAAGACAATGCAGGATG+GGG + Chr4:77666873-77666892 MsG0480022861.01.T01:CDS 40.0%
CAAGAAGGCTCGCTTAATAA+AGG - Chr4:77669521-77669540 None:intergenic 40.0%
CAATGAATGTTGCGAACGTT+TGG + Chr4:77666275-77666294 MsG0480022861.01.T01:CDS 40.0%
CCAAGAAAGGACAAAAAAGG+AGG - Chr4:77668249-77668268 None:intergenic 40.0%
CCACAAACAATGTTGACATC+TGG - Chr4:77668449-77668468 None:intergenic 40.0%
CCAGATGTCAACATTGTTTG+TGG + Chr4:77668446-77668465 MsG0480022861.01.T01:CDS 40.0%
CCTGGCACAATCTTGTAATA+GGG - Chr4:77666995-77667014 None:intergenic 40.0%
CGAACCCTGCAAAATGTTAT+AGG + Chr4:77667320-77667339 MsG0480022861.01.T01:intron 40.0%
CGTATCTTAGAATTTGTGGC+TGG + Chr4:77666135-77666154 MsG0480022861.01.T01:intron 40.0%
CTACAGGTTTCAGAAACCAA+AGG + Chr4:77666965-77666984 MsG0480022861.01.T01:CDS 40.0%
CTGTTCGGAACATCGAAATA+GGG + Chr4:77667405-77667424 MsG0480022861.01.T01:intron 40.0%
GAACAAGAATACACAGGAGA+TGG + Chr4:77665963-77665982 MsG0480022861.01.T01:CDS 40.0%
GAGATTGTGGATGGATAGTA+TGG + Chr4:77669200-77669219 MsG0480022861.01.T01:three_prime_UTR 40.0%
GATTCAAGACAATGCAGGAT+GGG + Chr4:77666872-77666891 MsG0480022861.01.T01:CDS 40.0%
GCTCGCTTAATAAAGGACAA+AGG - Chr4:77669514-77669533 None:intergenic 40.0%
GGATTTGCCATAACACACTA+AGG - Chr4:77668761-77668780 None:intergenic 40.0%
GTGACTATTCTAATCCATGG+AGG + Chr4:77668331-77668350 MsG0480022861.01.T01:CDS 40.0%
GTGTGTTTGTTTGTGGTGTT+TGG + Chr4:77667480-77667499 MsG0480022861.01.T01:intron 40.0%
TAAACAAAGGCCTGCTCTTA+AGG + Chr4:77665998-77666017 MsG0480022861.01.T01:CDS 40.0%
TATCATGAAATGGAGGCAAC+TGG - Chr4:77667531-77667550 None:intergenic 40.0%
TCAACATTGTTTGTGGAGCA+AGG + Chr4:77668453-77668472 MsG0480022861.01.T01:CDS 40.0%
TGACAATATTCGTTCAGTGG+AGG - Chr4:77668006-77668025 None:intergenic 40.0%
TGTCTTGAATCCACACAATG+AGG - Chr4:77666863-77666882 None:intergenic 40.0%
TTAAGGCCAATACTGGCAAT+TGG + Chr4:77666015-77666034 MsG0480022861.01.T01:CDS 40.0%
TTGAAGCCAGATGAGTGTTT+GGG + Chr4:77666624-77666643 MsG0480022861.01.T01:CDS 40.0%
! AAAGCGTGTGTGCTATCTTT+TGG + Chr4:77666732-77666751 MsG0480022861.01.T01:CDS 40.0%
! AAAGTGTTCTTAAGCTAGGG+AGG - Chr4:77668189-77668208 None:intergenic 40.0%
! AAGCGTGTGTGCTATCTTTT+GGG + Chr4:77666733-77666752 MsG0480022861.01.T01:CDS 40.0%
! TAAGAGCAGGCCTTTGTTTA+TGG - Chr4:77665998-77666017 None:intergenic 40.0%
! TGACCTTGTTGATAAACCTG+TGG + Chr4:77668728-77668747 MsG0480022861.01.T01:CDS 40.0%
! TGTCCCTTGTTCAAGTTATC+TGG - Chr4:77668987-77669006 None:intergenic 40.0%
! TTGTGGTGTTTGGAACACAA+TGG + Chr4:77667490-77667509 MsG0480022861.01.T01:intron 40.0%
!! AAGTTTGTTGCTCTTAGGAG+TGG + Chr4:77669118-77669137 MsG0480022861.01.T01:three_prime_UTR 40.0%
!! CTGATATGGTTGTTTCTTGC+AGG + Chr4:77666563-77666582 MsG0480022861.01.T01:intron 40.0%
!! GATATGGTTGTTTCTTGCAG+GGG + Chr4:77666565-77666584 MsG0480022861.01.T01:intron 40.0%
!! GCGATATATATGGACTGGAT+TGG - Chr4:77665709-77665728 None:intergenic 40.0%
!! GTTTCTGAAACCTGTAGAGA+GGG - Chr4:77666962-77666981 None:intergenic 40.0%
!! TAAGGTGATGAAGAGTGTTC+AGG + Chr4:77666180-77666199 MsG0480022861.01.T01:intron 40.0%
!! TTGGAACACAATGGATTGCA+GGG + Chr4:77667499-77667518 MsG0480022861.01.T01:intron 40.0%
!! TTTCTGAAACCTGTAGAGAG+GGG - Chr4:77666961-77666980 None:intergenic 40.0%
!! TTTGGAACACAATGGATTGC+AGG + Chr4:77667498-77667517 MsG0480022861.01.T01:intron 40.0%
!!! AGGTGGCAAGTGTTGTTTTA+TGG + Chr4:77668538-77668557 MsG0480022861.01.T01:CDS 40.0%
!!! AGGTTTTGTTAGCATCTGTC+CGG + Chr4:77667012-77667031 MsG0480022861.01.T01:CDS 40.0%
!!! CCTCCTTTTTTGTCCTTTCT+TGG + Chr4:77668246-77668265 MsG0480022861.01.T01:intron 40.0%
!!! GGTGGCAAGTGTTGTTTTAT+GGG + Chr4:77668539-77668558 MsG0480022861.01.T01:CDS 40.0%
AAATATTGCATAGGAGCCGC+CGG - Chr4:77666663-77666682 None:intergenic 45.0%
AACAACACTTGCCACCTCAA+AGG - Chr4:77668535-77668554 None:intergenic 45.0%
AACAGGAGACTACTATCCTC+AGG - Chr4:77667056-77667075 None:intergenic 45.0%
AACTGTGAAAGCTGAATCGC+TGG + Chr4:77669303-77669322 MsG0480022861.01.T01:three_prime_UTR 45.0%
ACAGGAGACTACTATCCTCA+GGG - Chr4:77667055-77667074 None:intergenic 45.0%
ACCTCTCATTGCAGCTATTC+TGG + Chr4:77666410-77666429 MsG0480022861.01.T01:CDS 45.0%
AGAAATGTCAGCATCTGGCA+AGG + Chr4:77666372-77666391 MsG0480022861.01.T01:CDS 45.0%
AGCAGCTGTAGTATCCGATT+CGG + Chr4:77668296-77668315 MsG0480022861.01.T01:CDS 45.0%
AGCTCTCCAATTGCCAGTAT+TGG - Chr4:77666024-77666043 None:intergenic 45.0%
AGTGAACCCAAACACTCATC+TGG - Chr4:77666633-77666652 None:intergenic 45.0%
ATATTCGTTCAGTGGAGGAG+AGG - Chr4:77668001-77668020 None:intergenic 45.0%
ATGATGCCAGTAGCCCAAAT+TGG - Chr4:77668408-77668427 None:intergenic 45.0%
ATGGTTACTTGGGACGATAC+TGG + Chr4:77666436-77666455 MsG0480022861.01.T01:CDS 45.0%
ATTCTGGCCGATGGTTACTT+GGG + Chr4:77666426-77666445 MsG0480022861.01.T01:CDS 45.0%
CAAAAGGAGGAAGACTTGGA+TGG + Chr4:77668958-77668977 MsG0480022861.01.T01:CDS 45.0%
CAAGTATCTTGTCGTAGACG+GGG - Chr4:77668566-77668585 None:intergenic 45.0%
CAGCCACAGGTTTATCAACA+AGG - Chr4:77668734-77668753 None:intergenic 45.0%
CATATAGTCCGCATAGCATC+TGG - Chr4:77668858-77668877 None:intergenic 45.0%
CCCTATTACAAGATTGTGCC+AGG + Chr4:77666992-77667011 MsG0480022861.01.T01:CDS 45.0%
CCTATTTCGATGTTCCGAAC+AGG - Chr4:77667407-77667426 None:intergenic 45.0%
CCTGTTCGGAACATCGAAAT+AGG + Chr4:77667404-77667423 MsG0480022861.01.T01:intron 45.0%
CTCTTCATCACCTTACAAGC+GGG - Chr4:77666175-77666194 None:intergenic 45.0%
CTGTACCCCTTAGTGTGTTA+TGG + Chr4:77668751-77668770 MsG0480022861.01.T01:CDS 45.0%
CTTGTAATAGGGCTACCCTT+TGG - Chr4:77666984-77667003 None:intergenic 45.0%
GAGAAGAGAACCTGAAGAAG+AGG - Chr4:77665809-77665828 None:intergenic 45.0%
GCGGTGACTATTCTAATCCA+TGG + Chr4:77668328-77668347 MsG0480022861.01.T01:CDS 45.0%
GGAAGCTGGGGATAATTTGA+AGG - Chr4:77668505-77668524 None:intergenic 45.0%
GGACAGATGCTAACAAAACC+TGG - Chr4:77667013-77667032 None:intergenic 45.0%
GGATTCAAGACAATGCAGGA+TGG + Chr4:77666871-77666890 MsG0480022861.01.T01:CDS 45.0%
GTATCGTCCCAAGTAACCAT+CGG - Chr4:77666436-77666455 None:intergenic 45.0%
GTCTCTACGTAATTGCGCTA+GGG + Chr4:77666697-77666716 MsG0480022861.01.T01:CDS 45.0%
GTGTGGATTCAAGACAATGC+AGG + Chr4:77666867-77666886 MsG0480022861.01.T01:CDS 45.0%
GTTGAAGCCAGATGAGTGTT+TGG + Chr4:77666623-77666642 MsG0480022861.01.T01:CDS 45.0%
TATTCTGGCCGATGGTTACT+TGG + Chr4:77666425-77666444 MsG0480022861.01.T01:CDS 45.0%
TCAACTCCGGATTTCTTGTC+AGG - Chr4:77667086-77667105 None:intergenic 45.0%
TCACGAACAACCTCTTCTTC+AGG + Chr4:77665796-77665815 MsG0480022861.01.T01:CDS 45.0%
TCTTCATCACCTTACAAGCG+GGG - Chr4:77666174-77666193 None:intergenic 45.0%
TGCATGATGCAATAGCACCT+AGG - Chr4:77666839-77666858 None:intergenic 45.0%
TGTGGAGCAAGGAACTATGA+TGG + Chr4:77668464-77668483 MsG0480022861.01.T01:CDS 45.0%
TTTGTTGCTCTTAGGAGTGG+AGG + Chr4:77669121-77669140 MsG0480022861.01.T01:three_prime_UTR 45.0%
! ACCGCTTCTTTTCTCCGAAT+CGG - Chr4:77668313-77668332 None:intergenic 45.0%
! AGCGTGTGTGCTATCTTTTG+GGG + Chr4:77666734-77666753 MsG0480022861.01.T01:CDS 45.0%
! GATGCTATGCGGACTATATG+TGG + Chr4:77668858-77668877 MsG0480022861.01.T01:CDS 45.0%
! TGGAGCATCATGATGATCTC+AGG + Chr4:77667120-77667139 MsG0480022861.01.T01:CDS 45.0%
! TTTGGGTTCACTATGTCCTC+CGG + Chr4:77666641-77666660 MsG0480022861.01.T01:CDS 45.0%
!! GGTTTCTGAAACCTGTAGAG+AGG - Chr4:77666963-77666982 None:intergenic 45.0%
!! TATGGACTGGATTGGATGGA+TGG - Chr4:77665701-77665720 None:intergenic 45.0%
!! TCCGATTCGGAGAAAAGAAG+CGG + Chr4:77668309-77668328 MsG0480022861.01.T01:CDS 45.0%
!! TGCGAACGTTTGGCTTTCTT+TGG + Chr4:77666285-77666304 MsG0480022861.01.T01:CDS 45.0%
!! TTCCAAGGAAAGTGCCAAGA+AGG + Chr4:77666779-77666798 MsG0480022861.01.T01:CDS 45.0%
!!! TTATAGATAATTATTTTAAT+GGG + Chr4:77669245-77669264 MsG0480022861.01.T01:three_prime_UTR 5.0%
!!! TTATTTATTTATATTTTCAA+AGG + Chr4:77665929-77665948 MsG0480022861.01.T01:intron 5.0%
AAAGGTTGAGAGGGAAGCTG+GGG - Chr4:77668517-77668536 None:intergenic 50.0%
AGCCTTCTTGGCACTTTCCT+TGG - Chr4:77666784-77666803 None:intergenic 50.0%
AGCTTCCCTCTCAACCTTTG+AGG + Chr4:77668518-77668537 MsG0480022861.01.T01:CDS 50.0%
ATCTGTCCGGAAGCAGAATC+TGG + Chr4:77667025-77667044 MsG0480022861.01.T01:CDS 50.0%
ATTGCAGCTATTCTGGCCGA+TGG + Chr4:77666417-77666436 MsG0480022861.01.T01:CDS 50.0%
CAAAGGTTGAGAGGGAAGCT+GGG - Chr4:77668518-77668537 None:intergenic 50.0%
CAATTCCTCCACCTGTGTCA+CGG - Chr4:77668364-77668383 None:intergenic 50.0%
CATCATGCAGCCTCATTGTG+TGG + Chr4:77666850-77666869 MsG0480022861.01.T01:CDS 50.0%
CATGTTAGCAGCTGCTGTTG+TGG + Chr4:77668674-77668693 MsG0480022861.01.T01:CDS 50.0%
CCTGCTCTTAAGGCCAATAC+TGG + Chr4:77666008-77666027 MsG0480022861.01.T01:CDS 50.0%
CTGCGAGAAATGTCAGCATC+TGG + Chr4:77666367-77666386 MsG0480022861.01.T01:CDS 50.0%
CTTCATCACCTTACAAGCGG+GGG - Chr4:77666173-77666192 None:intergenic 50.0%
GAGACGCCTGACAAGAAATC+CGG + Chr4:77667077-77667096 MsG0480022861.01.T01:CDS 50.0%
GCCAGAATAGCTGCAATGAG+AGG - Chr4:77666414-77666433 None:intergenic 50.0%
GGAGAACCAGATTCTGCTTC+CGG - Chr4:77667034-77667053 None:intergenic 50.0%
GGCATGATGATCAAGCAGAC+AGG + Chr4:77669377-77669396 MsG0480022861.01.T01:three_prime_UTR 50.0%
GGTCTCTACGTAATTGCGCT+AGG + Chr4:77666696-77666715 MsG0480022861.01.T01:CDS 50.0%
GGTTGTTCGTGATCGTGTAC+CGG - Chr4:77665788-77665807 None:intergenic 50.0%
TACGTAATTGCGCTAGGGAC+TGG + Chr4:77666702-77666721 MsG0480022861.01.T01:CDS 50.0%
TCAAAGGTTGAGAGGGAAGC+TGG - Chr4:77668519-77668538 None:intergenic 50.0%
TCTTGTCAGGCGTCTCAAAC+AGG - Chr4:77667073-77667092 None:intergenic 50.0%
TGCCACCTCAAAGGTTGAGA+GGG - Chr4:77668526-77668545 None:intergenic 50.0%
TTCATCACCTTACAAGCGGG+GGG - Chr4:77666172-77666191 None:intergenic 50.0%
TTGCCACCTCAAAGGTTGAG+AGG - Chr4:77668527-77668546 None:intergenic 50.0%
! CACTCATCTGGCTTCAACAG+TGG - Chr4:77666621-77666640 None:intergenic 50.0%
! GCTGAATCGCTGGCATTGAA+AGG + Chr4:77669313-77669332 MsG0480022861.01.T01:three_prime_UTR 50.0%
! TTCCCTCTCAACCTTTGAGG+TGG + Chr4:77668521-77668540 MsG0480022861.01.T01:CDS 50.0%
! TTTTAGGCACCCCTCTCTAC+AGG + Chr4:77666949-77666968 MsG0480022861.01.T01:CDS 50.0%
!! CCAGTATTGGCCTTAAGAGC+AGG - Chr4:77666011-77666030 None:intergenic 50.0%
!! TTACAAGCGGGGGGTTTTGT+GGG - Chr4:77666163-77666182 None:intergenic 50.0%
CACAAAACCCCCCGCTTGTA+AGG + Chr4:77666162-77666181 MsG0480022861.01.T01:intron 55.0%
CACAACTGGCGACCAGTCAT+CGG - Chr4:77667700-77667719 None:intergenic 55.0%
CGGAATGTGGTCGTCGTGAA+CGG - Chr4:77665768-77665787 None:intergenic 55.0%
CGTGATCGTGTACCGGAATG+TGG - Chr4:77665781-77665800 None:intergenic 55.0%
CGTTCACGACGACCACATTC+CGG + Chr4:77665766-77665785 MsG0480022861.01.T01:CDS 55.0%
GTAATTGCGCTAGGGACTGG+TGG + Chr4:77666705-77666724 MsG0480022861.01.T01:CDS 55.0%
! ACACTAAGGGGTACAGCCAC+AGG - Chr4:77668747-77668766 None:intergenic 55.0%
! CTTACAAGCGGGGGGTTTTG+TGG - Chr4:77666164-77666183 None:intergenic 55.0%
!! GCAGAATCTGGTTCTCCCTG+AGG + Chr4:77667037-77667056 MsG0480022861.01.T01:CDS 55.0%
!! TACAAGCGGGGGGTTTTGTG+GGG - Chr4:77666162-77666181 None:intergenic 55.0%
GACAATGCAGGATGGGGCCT+TGG + Chr4:77666879-77666898 MsG0480022861.01.T01:CDS 60.0%
GAGGCTTTGCACCGTGACAC+AGG + Chr4:77668350-77668369 MsG0480022861.01.T01:CDS 60.0%
GCAGGATGGGGCCTTGGATT+TGG + Chr4:77666885-77666904 MsG0480022861.01.T01:CDS 60.0%
GCTTTGCACCGTGACACAGG+TGG + Chr4:77668353-77668372 MsG0480022861.01.T01:CDS 60.0%
GGGTTCACTATGTCCTCCGG+CGG + Chr4:77666644-77666663 MsG0480022861.01.T01:CDS 60.0%
GTCACGGTGCAAAGCCTCCA+TGG - Chr4:77668348-77668367 None:intergenic 60.0%
TATTGCATAGGAGCCGCCGG+AGG - Chr4:77666660-77666679 None:intergenic 60.0%
TTGCACCGTGACACAGGTGG+AGG + Chr4:77668356-77668375 MsG0480022861.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr4 gene 77665673 77669585 77665673 ID=MsG0480022861.01;Name=MsG0480022861.01
Chr4 mRNA 77665673 77669585 77665673 ID=MsG0480022861.01.T01;Parent=MsG0480022861.01;Name=MsG0480022861.01.T01;_AED=0.21;_eAED=0.21;_QI=85|1|1|1|1|1|5|479|588
Chr4 exon 77665673 77665817 77665673 ID=MsG0480022861.01.T01:exon:4868;Parent=MsG0480022861.01.T01
Chr4 exon 77665951 77666059 77665951 ID=MsG0480022861.01.T01:exon:4869;Parent=MsG0480022861.01.T01
Chr4 exon 77666274 77666491 77666274 ID=MsG0480022861.01.T01:exon:4870;Parent=MsG0480022861.01.T01
Chr4 exon 77666585 77667141 77666585 ID=MsG0480022861.01.T01:exon:4871;Parent=MsG0480022861.01.T01
Chr4 exon 77668284 77669585 77668284 ID=MsG0480022861.01.T01:exon:4872;Parent=MsG0480022861.01.T01
Chr4 five_prime_UTR 77665673 77665757 77665673 ID=MsG0480022861.01.T01:five_prime_utr;Parent=MsG0480022861.01.T01
Chr4 CDS 77665758 77665817 77665758 ID=MsG0480022861.01.T01:cds;Parent=MsG0480022861.01.T01
Chr4 CDS 77665951 77666059 77665951 ID=MsG0480022861.01.T01:cds;Parent=MsG0480022861.01.T01
Chr4 CDS 77666274 77666491 77666274 ID=MsG0480022861.01.T01:cds;Parent=MsG0480022861.01.T01
Chr4 CDS 77666585 77667141 77666585 ID=MsG0480022861.01.T01:cds;Parent=MsG0480022861.01.T01
Chr4 CDS 77668284 77669106 77668284 ID=MsG0480022861.01.T01:cds;Parent=MsG0480022861.01.T01
Chr4 three_prime_UTR 77669107 77669585 77669107 ID=MsG0480022861.01.T01:three_prime_utr;Parent=MsG0480022861.01.T01
Gene Sequence

>MsG0480022861.01.T01

ATGGGTTCCGTTCACGACGACCACATTCCGGTACACGATCACGAACAACCTCTTCTTCAGGATGAAACGAACGAACAAGAATACACAGGAGATGGTTCAGTTGACCATAAACAAAGGCCTGCTCTTAAGGCCAATACTGGCAATTGGAGAGCTTGTCCATTTATTCTAGGCAATGAATGTTGCGAACGTTTGGCTTTCTTTGGTATTGCAACAAACCTTGTTACCTATCTTACCACAAAATTACACGAAAGTAACGCGTCTGCTGCGAGAAATGTCAGCATCTGGCAAGGAACTTGTTATCTTACACCTCTCATTGCAGCTATTCTGGCCGATGGTTACTTGGGACGATACTGGACAATCGCTGTTTTCTCCATGATTTACTTTGTTGGGATGAGTATTTTGACTCTTTCGGTATCTGTTCCACTGTTGAAGCCAGATGAGTGTTTGGGTTCACTATGTCCTCCGGCGGCTCCTATGCAATATTTTGTGTTCTACTTGGGTCTCTACGTAATTGCGCTAGGGACTGGTGGTGTAAAAGCGTGTGTGCTATCTTTTGGGGCAGATCAGTTTGATGATACTGATTCCAAGGAAAGTGCCAAGAAGGCTTCCTATTTCAATTGGTATTACTTTTCTATATACCTAGGTGCTATTGCATCATGCAGCCTCATTGTGTGGATTCAAGACAATGCAGGATGGGGCCTTGGATTTGGAATTCCTGCTTTATTTATGGGATTATCCGTTGGAAGTTTCATTTTAGGCACCCCTCTCTACAGGTTTCAGAAACCAAAGGGTAGCCCTATTACAAGATTGTGCCAGGTTTTGTTAGCATCTGTCCGGAAGCAGAATCTGGTTCTCCCTGAGGATAGTAGTCTCCTGTTTGAGACGCCTGACAAGAAATCCGGAGTTGAAAAAAGTCGCAAACTGGAGCATCATGATGATCTCAGGTTTTTTGATAGAGCAGCTGTAGTATCCGATTCGGAGAAAAGAAGCGGTGACTATTCTAATCCATGGAGGCTTTGCACCGTGACACAGGTGGAGGAATTGAAAATCCTGATTCGTATGTTTCCAATTTGGGCTACTGGCATCATTTTTTCTTCTGTCTACGCCCAGATGTCAACATTGTTTGTGGAGCAAGGAACTATGATGGACACAAACATCAGTTCCTTCAAATTATCCCCAGCTTCCCTCTCAACCTTTGAGGTGGCAAGTGTTGTTTTATGGGTCCCCGTCTACGACAAGATACTTGTTCCTATTGTGAAGAAATTTACAGGCAAGAAAAGGGGCATTTCTGTGTTTCAAAGAATAGGAATTGGCCTTTTTATTTCTGGGCTTTGCATGTTAGCAGCTGCTGTTGTGGAGATTAAGCGTCTGCAGCTTGCAAGAGAGCTTGACCTTGTTGATAAACCTGTGGCTGTACCCCTTAGTGTGTTATGGCAAATCCCTCAGTATTTAATATTAGGAGCAGCAGAAATATTTACATTTGTTGGGCAGCTTGAGTTCTTCTACGAAGAATCACCAGATGCTATGCGGACTATATGTGGTGCATTGCCGCTTCTTAATTTTTCATTGGGGAATTACTTGAGCTCTTTCATTCTTACTATAGTAACTTACTTCACAACAAAAGGAGGAAGACTTGGATGGATTCCAGATAACTTGAACAAGGGACATCTTGATTATTATTTTCTGCTTTTATCTGGACTTAGCTTATTGAATATGTTAGTGTTCATAATTGCATCCAAAATATACAAACCAAAGAAGGCTTCTTAA

Protein sequence

>MsG0480022861.01.T01

MGSVHDDHIPVHDHEQPLLQDETNEQEYTGDGSVDHKQRPALKANTGNWRACPFILGNECCERLAFFGIATNLVTYLTTKLHESNASAARNVSIWQGTCYLTPLIAAILADGYLGRYWTIAVFSMIYFVGMSILTLSVSVPLLKPDECLGSLCPPAAPMQYFVFYLGLYVIALGTGGVKACVLSFGADQFDDTDSKESAKKASYFNWYYFSIYLGAIASCSLIVWIQDNAGWGLGFGIPALFMGLSVGSFILGTPLYRFQKPKGSPITRLCQVLLASVRKQNLVLPEDSSLLFETPDKKSGVEKSRKLEHHDDLRFFDRAAVVSDSEKRSGDYSNPWRLCTVTQVEELKILIRMFPIWATGIIFSSVYAQMSTLFVEQGTMMDTNISSFKLSPASLSTFEVASVVLWVPVYDKILVPIVKKFTGKKRGISVFQRIGIGLFISGLCMLAAAVVEIKRLQLARELDLVDKPVAVPLSVLWQIPQYLILGAAEIFTFVGQLEFFYEESPDAMRTICGALPLLNFSLGNYLSSFILTIVTYFTTKGGRLGWIPDNLNKGHLDYYFLLLSGLSLLNMLVFIIASKIYKPKKAS*