Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880044436.01.T01 | XP_013445500.1 | 68.954 | 306 | 28 | 4 | 1 | 242 | 1 | 303 | 1.73E-108 | 325 |
MsG0880044436.01.T02 | XP_013445500.1 | 87.662 | 308 | 33 | 3 | 1 | 308 | 1 | 303 | 3.89E-143 | 416 |
MsG0880044436.01.T03 | XP_013445500.1 | 83.525 | 261 | 38 | 3 | 36 | 296 | 48 | 303 | 1.76E-97 | 299 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880044436.01.T01 | Q9T076 | 50.649 | 154 | 65 | 2 | 1 | 150 | 4 | 150 | 1.11E-48 | 166 |
MsG0880044436.01.T02 | Q9T076 | 54.962 | 131 | 55 | 1 | 1 | 127 | 4 | 134 | 4.30E-49 | 169 |
MsG0880044436.01.T03 | Q9T076 | 57.5 | 80 | 34 | 0 | 36 | 115 | 55 | 134 | 1.33E-29 | 118 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880044436.01.T01 | A0A072TQN9 | 68.954 | 306 | 28 | 4 | 1 | 242 | 1 | 303 | 8.27e-109 | 325 |
MsG0880044436.01.T02 | A0A072TQN9 | 87.662 | 308 | 33 | 3 | 1 | 308 | 1 | 303 | 1.86e-143 | 416 |
MsG0880044436.01.T03 | A0A072TQN9 | 83.525 | 261 | 38 | 3 | 36 | 296 | 48 | 303 | 8.38e-98 | 299 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0880044317.01 | MsG0880044436.01 | 0.837730 | 4.373791e-57 | 5.733448e-54 |
MsG0880044411.01 | MsG0880044436.01 | 0.910608 | 1.549417e-82 | 3.189512e-78 |
MsG0880044436.01 | MsG0880045991.01 | -0.805740 | 1.153612e-49 | 6.151130e-47 |
MsG0880044436.01 | MsG0880047107.01 | 0.822044 | 2.924449e-53 | 2.420241e-50 |
MsG0880044436.01 | MsG0880047643.01 | 0.839174 | 1.855669e-57 | 2.541731e-54 |
MsG0180004124.01 | MsG0880044436.01 | 0.803706 | 3.067083e-49 | 1.551884e-46 |
MsG0180004125.01 | MsG0880044436.01 | 0.806578 | 7.686367e-50 | 4.186767e-47 |
MsG0180005545.01 | MsG0880044436.01 | 0.810398 | 1.175795e-50 | 7.079703e-48 |
MsG0180005555.01 | MsG0880044436.01 | 0.823204 | 1.571205e-53 | 1.343919e-50 |
MsG0180005556.01 | MsG0880044436.01 | 0.831688 | 1.448630e-55 | 1.583796e-52 |
MsG0180005557.01 | MsG0880044436.01 | 0.801492 | 8.778888e-49 | 4.198213e-46 |
MsG0180005558.01 | MsG0880044436.01 | 0.821728 | 3.459522e-53 | 2.837575e-50 |
MsG0280006319.01 | MsG0880044436.01 | 0.829783 | 4.242863e-55 | 4.386996e-52 |
MsG0780040350.01 | MsG0880044436.01 | 0.841553 | 4.432216e-58 | 6.536001e-55 |
MsG0780041807.01 | MsG0880044436.01 | 0.819860 | 9.303872e-53 | 7.244542e-50 |
MsG0380012931.01 | MsG0880044436.01 | 0.822442 | 2.364042e-53 | 1.978986e-50 |
MsG0380014646.01 | MsG0880044436.01 | 0.844491 | 7.316422e-59 | 1.183187e-55 |
MsG0380014890.01 | MsG0880044436.01 | 0.817696 | 2.884137e-52 | 2.115288e-49 |
MsG0680035612.01 | MsG0880044436.01 | 0.807648 | 4.561004e-50 | 2.554246e-47 |
MsG0480018629.01 | MsG0880044436.01 | 0.812899 | 3.361118e-51 | 2.163144e-48 |
MsG0480021151.01 | MsG0880044436.01 | 0.853508 | 2.282240e-61 | 4.943112e-58 |
MsG0480022242.01 | MsG0880044436.01 | 0.811171 | 8.000634e-51 | 4.917523e-48 |
MsG0480022244.01 | MsG0880044436.01 | 0.816551 | 5.216253e-52 | 3.707448e-49 |
MsG0480022861.01 | MsG0880044436.01 | 0.831782 | 1.373344e-55 | 1.505829e-52 |
MsG0480023344.01 | MsG0880044436.01 | 0.815272 | 1.006636e-51 | 6.908604e-49 |
MsG0480023375.01 | MsG0880044436.01 | 0.808416 | 3.130036e-50 | 1.788686e-47 |
MsG0580024567.01 | MsG0880044436.01 | 0.802154 | 6.418459e-49 | 3.121413e-46 |
MsG0580024768.01 | MsG0880044436.01 | 0.801627 | 8.236380e-49 | 3.952040e-46 |
MsG0380015828.01 | MsG0880044436.01 | 0.806486 | 8.037397e-50 | 4.367779e-47 |
MsG0380016066.01 | MsG0880044436.01 | 0.830977 | 2.166704e-55 | 2.319351e-52 |
MsG0380016492.01 | MsG0880044436.01 | 0.821546 | 3.812220e-53 | 3.110909e-50 |
MsG0580026282.01 | MsG0880044436.01 | -0.807567 | 4.746846e-50 | 2.652679e-47 |
MsG0580029706.01 | MsG0880044436.01 | 0.813270 | 2.785916e-51 | 1.810966e-48 |
MsG0280007423.01 | MsG0880044436.01 | 0.850528 | 1.602402e-60 | 3.147885e-57 |
MsG0780036586.01 | MsG0880044436.01 | 0.805853 | 1.092164e-49 | 5.840435e-47 |
MsG0780037915.01 | MsG0880044436.01 | 0.800318 | 1.524707e-48 | 7.078071e-46 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880044436.01.T01 | MTR_8g463180 | 68.954 | 306 | 28 | 4 | 1 | 242 | 1 | 303 | 2.10e-112 | 325 |
MsG0880044436.01.T01 | MTR_2g079030 | 56.545 | 191 | 64 | 6 | 1 | 188 | 3 | 177 | 1.07e-60 | 199 |
MsG0880044436.01.T01 | MTR_2g090575 | 55.462 | 119 | 53 | 0 | 7 | 125 | 8 | 126 | 1.92e-48 | 163 |
MsG0880044436.01.T01 | MTR_2g090580 | 45.026 | 191 | 99 | 4 | 1 | 189 | 4 | 190 | 2.16e-47 | 155 |
MsG0880044436.01.T01 | MTR_4g124280 | 42.254 | 213 | 102 | 5 | 1 | 209 | 2 | 197 | 7.31e-43 | 145 |
MsG0880044436.01.T01 | MTR_8g095013 | 42.731 | 227 | 112 | 5 | 1 | 224 | 2 | 213 | 2.02e-42 | 146 |
MsG0880044436.01.T01 | MTR_4g078410 | 46.980 | 149 | 75 | 2 | 20 | 166 | 21 | 167 | 6.40e-42 | 141 |
MsG0880044436.01.T01 | MTR_3g092170 | 40.476 | 210 | 112 | 4 | 1 | 203 | 2 | 205 | 1.93e-41 | 143 |
MsG0880044436.01.T01 | MTR_8g094990 | 40.183 | 219 | 120 | 6 | 1 | 214 | 2 | 214 | 5.64e-41 | 142 |
MsG0880044436.01.T01 | MTR_8g086360 | 47.887 | 142 | 67 | 2 | 8 | 147 | 6 | 142 | 4.28e-40 | 137 |
MsG0880044436.01.T01 | MTR_3g105930 | 48.529 | 136 | 64 | 3 | 21 | 150 | 24 | 159 | 5.17e-37 | 129 |
MsG0880044436.01.T01 | MTR_4g081100 | 46.281 | 121 | 63 | 1 | 7 | 125 | 15 | 135 | 2.89e-36 | 128 |
MsG0880044436.01.T01 | MTR_8g095020 | 42.035 | 226 | 98 | 11 | 22 | 226 | 23 | 236 | 1.26e-35 | 129 |
MsG0880044436.01.T01 | MTR_2g101300 | 45.062 | 162 | 75 | 6 | 3 | 161 | 6 | 156 | 2.86e-34 | 122 |
MsG0880044436.01.T01 | MTR_1g014120 | 40.373 | 161 | 72 | 5 | 8 | 164 | 9 | 149 | 1.32e-32 | 117 |
MsG0880044436.01.T01 | MTR_2g083250 | 45.455 | 110 | 56 | 3 | 21 | 126 | 23 | 132 | 4.47e-30 | 113 |
MsG0880044436.01.T01 | MTR_6g022170 | 48.624 | 109 | 51 | 2 | 26 | 131 | 36 | 142 | 5.78e-29 | 107 |
MsG0880044436.01.T01 | MTR_4g077787 | 37.179 | 156 | 85 | 4 | 5 | 152 | 12 | 162 | 3.33e-28 | 106 |
MsG0880044436.01.T01 | MTR_4g111640 | 37.908 | 153 | 84 | 3 | 9 | 152 | 12 | 162 | 2.75e-27 | 103 |
MsG0880044436.01.T01 | MTR_7g090170 | 41.912 | 136 | 56 | 4 | 21 | 150 | 24 | 142 | 3.69e-25 | 97.1 |
MsG0880044436.01.T01 | MTR_4g112310 | 40.708 | 113 | 65 | 1 | 40 | 152 | 2 | 112 | 1.56e-23 | 92.4 |
MsG0880044436.01.T01 | MTR_5g006040 | 29.932 | 147 | 100 | 1 | 7 | 153 | 9 | 152 | 2.89e-22 | 90.5 |
MsG0880044436.01.T01 | MTR_2g088990 | 31.169 | 154 | 95 | 5 | 4 | 149 | 5 | 155 | 5.44e-20 | 85.5 |
MsG0880044436.01.T01 | MTR_4g130780 | 33.333 | 120 | 75 | 4 | 7 | 121 | 10 | 129 | 6.87e-20 | 84.3 |
MsG0880044436.01.T01 | MTR_2g025580 | 32.468 | 154 | 93 | 5 | 5 | 155 | 9 | 154 | 1.46e-19 | 83.2 |
MsG0880044436.01.T01 | MTR_1g090420 | 30.726 | 179 | 107 | 5 | 11 | 174 | 15 | 191 | 3.81e-19 | 83.2 |
MsG0880044436.01.T01 | MTR_4g114870 | 31.852 | 135 | 83 | 2 | 10 | 135 | 8 | 142 | 1.52e-17 | 80.9 |
MsG0880044436.01.T01 | MTR_4g114870 | 33.889 | 180 | 96 | 3 | 24 | 201 | 191 | 349 | 2.04e-14 | 72.0 |
MsG0880044436.01.T01 | MTR_8g099220 | 33.071 | 127 | 79 | 2 | 1 | 121 | 1 | 127 | 2.12e-17 | 76.3 |
MsG0880044436.01.T01 | MTR_0334s0010 | 35.897 | 117 | 72 | 3 | 7 | 121 | 10 | 125 | 2.35e-17 | 77.8 |
MsG0880044436.01.T01 | MTR_1g104800 | 29.221 | 154 | 105 | 1 | 11 | 164 | 12 | 161 | 3.85e-17 | 77.0 |
MsG0880044436.01.T01 | MTR_4g130800 | 33.333 | 123 | 78 | 3 | 5 | 123 | 9 | 131 | 5.37e-17 | 78.2 |
MsG0880044436.01.T01 | MTR_1g077790 | 32.692 | 104 | 67 | 1 | 21 | 121 | 26 | 129 | 5.51e-17 | 76.6 |
MsG0880044436.01.T01 | MTR_5g088000 | 34.328 | 134 | 81 | 5 | 5 | 135 | 1 | 130 | 2.29e-16 | 73.6 |
MsG0880044436.01.T01 | MTR_6g083240 | 35.897 | 156 | 93 | 4 | 7 | 155 | 8 | 163 | 2.57e-16 | 74.7 |
MsG0880044436.01.T01 | MTR_4g114830 | 37.097 | 124 | 72 | 4 | 16 | 134 | 20 | 142 | 5.76e-16 | 73.2 |
MsG0880044436.01.T01 | MTR_3g099570 | 35.878 | 131 | 80 | 3 | 5 | 135 | 8 | 134 | 8.03e-16 | 73.6 |
MsG0880044436.01.T01 | MTR_6g013420 | 34.641 | 153 | 91 | 5 | 1 | 150 | 17 | 163 | 1.51e-15 | 72.8 |
MsG0880044436.01.T01 | MTR_4g067200 | 32.773 | 119 | 73 | 4 | 7 | 119 | 10 | 127 | 1.59e-15 | 72.4 |
MsG0880044436.01.T01 | MTR_4g066110 | 32.773 | 119 | 73 | 4 | 7 | 119 | 10 | 127 | 1.59e-15 | 72.4 |
MsG0880044436.01.T01 | MTR_1g090190 | 35.294 | 119 | 68 | 3 | 18 | 130 | 17 | 132 | 4.25e-15 | 71.2 |
MsG0880044436.01.T01 | MTR_3g099580 | 37.903 | 124 | 70 | 4 | 1 | 121 | 1 | 120 | 4.30e-15 | 71.6 |
MsG0880044436.01.T01 | MTR_1g112700 | 31.034 | 116 | 77 | 2 | 3 | 117 | 12 | 125 | 5.25e-15 | 71.2 |
MsG0880044436.01.T01 | MTR_8g007020 | 38.017 | 121 | 67 | 5 | 5 | 122 | 6 | 121 | 6.02e-15 | 71.2 |
MsG0880044436.01.T01 | MTR_4g130800 | 33.333 | 111 | 71 | 2 | 16 | 123 | 20 | 130 | 1.01e-14 | 72.0 |
MsG0880044436.01.T01 | MTR_8g007035 | 36.667 | 120 | 70 | 4 | 5 | 122 | 6 | 121 | 4.91e-14 | 68.9 |
MsG0880044436.01.T01 | MTR_6g013200 | 37.500 | 120 | 69 | 4 | 5 | 121 | 15 | 131 | 1.65e-13 | 67.0 |
MsG0880044436.01.T01 | MTR_7g086100 | 32.759 | 116 | 76 | 1 | 7 | 122 | 9 | 122 | 2.78e-13 | 67.4 |
MsG0880044436.01.T01 | MTR_7g086090 | 31.933 | 119 | 78 | 2 | 4 | 121 | 5 | 121 | 2.96e-13 | 67.4 |
MsG0880044436.01.T01 | MTR_6g080660 | 32.773 | 119 | 73 | 3 | 3 | 121 | 11 | 122 | 5.83e-13 | 66.2 |
MsG0880044436.01.T01 | MTR_3g099680 | 34.746 | 118 | 73 | 3 | 5 | 121 | 8 | 122 | 6.54e-13 | 66.2 |
MsG0880044436.01.T01 | MTR_3g099540 | 33.051 | 118 | 75 | 3 | 4 | 121 | 8 | 121 | 6.88e-13 | 64.3 |
MsG0880044436.01.T01 | MTR_6g023760 | 34.314 | 102 | 63 | 3 | 21 | 121 | 23 | 121 | 1.49e-12 | 64.3 |
MsG0880044436.01.T01 | MTR_8g089110 | 33.043 | 115 | 72 | 2 | 5 | 119 | 9 | 118 | 3.32e-12 | 62.0 |
MsG0880044436.01.T01 | MTR_7g086230 | 27.632 | 152 | 83 | 4 | 7 | 135 | 9 | 156 | 2.16e-11 | 61.2 |
MsG0880044436.01.T01 | MTR_7g086280 | 26.974 | 152 | 84 | 4 | 7 | 135 | 9 | 156 | 2.78e-11 | 60.8 |
MsG0880044436.01.T01 | MTR_4g007250 | 28.226 | 124 | 85 | 3 | 24 | 147 | 29 | 148 | 9.96e-11 | 59.3 |
MsG0880044436.01.T02 | MTR_8g463180 | 87.662 | 308 | 33 | 3 | 1 | 308 | 1 | 303 | 4.71e-147 | 416 |
MsG0880044436.01.T02 | MTR_2g079030 | 52.018 | 223 | 81 | 6 | 1 | 223 | 3 | 199 | 7.51e-61 | 202 |
MsG0880044436.01.T02 | MTR_2g090575 | 42.561 | 289 | 145 | 8 | 7 | 276 | 8 | 294 | 3.52e-54 | 181 |
MsG0880044436.01.T02 | MTR_2g090580 | 47.514 | 181 | 76 | 4 | 1 | 175 | 4 | 171 | 4.35e-48 | 160 |
MsG0880044436.01.T02 | MTR_8g095013 | 39.175 | 291 | 143 | 9 | 1 | 272 | 2 | 277 | 7.24e-46 | 157 |
MsG0880044436.01.T02 | MTR_8g094990 | 39.921 | 253 | 128 | 5 | 1 | 232 | 2 | 251 | 5.63e-44 | 152 |
MsG0880044436.01.T02 | MTR_4g124280 | 40.090 | 222 | 95 | 5 | 21 | 233 | 22 | 214 | 1.24e-42 | 147 |
MsG0880044436.01.T02 | MTR_4g078410 | 52.830 | 106 | 50 | 0 | 20 | 125 | 21 | 126 | 1.64e-39 | 137 |
MsG0880044436.01.T02 | MTR_8g086360 | 48.507 | 134 | 65 | 2 | 7 | 136 | 5 | 138 | 3.04e-39 | 137 |
MsG0880044436.01.T02 | MTR_8g095020 | 37.931 | 261 | 115 | 9 | 22 | 257 | 23 | 261 | 7.28e-39 | 139 |
MsG0880044436.01.T02 | MTR_3g092170 | 37.931 | 232 | 112 | 5 | 1 | 226 | 2 | 207 | 2.07e-36 | 132 |
MsG0880044436.01.T02 | MTR_4g081100 | 47.107 | 121 | 62 | 2 | 7 | 125 | 15 | 135 | 4.04e-36 | 129 |
MsG0880044436.01.T02 | MTR_3g105930 | 46.479 | 142 | 64 | 4 | 21 | 159 | 24 | 156 | 1.96e-35 | 126 |
MsG0880044436.01.T02 | MTR_1g014120 | 46.281 | 121 | 62 | 2 | 8 | 125 | 9 | 129 | 5.08e-35 | 125 |
MsG0880044436.01.T02 | MTR_2g101300 | 48.800 | 125 | 56 | 3 | 12 | 133 | 18 | 137 | 5.41e-32 | 118 |
MsG0880044436.01.T02 | MTR_2g083250 | 44.348 | 115 | 60 | 3 | 21 | 131 | 23 | 137 | 1.02e-30 | 116 |
MsG0880044436.01.T02 | MTR_6g022170 | 48.624 | 109 | 51 | 2 | 26 | 131 | 36 | 142 | 4.90e-29 | 109 |
MsG0880044436.01.T02 | MTR_4g077787 | 38.356 | 146 | 75 | 5 | 5 | 142 | 12 | 150 | 3.84e-27 | 105 |
MsG0880044436.01.T02 | MTR_4g111640 | 36.585 | 164 | 86 | 5 | 9 | 162 | 12 | 167 | 3.86e-26 | 102 |
MsG0880044436.01.T02 | MTR_7g090170 | 40.000 | 140 | 55 | 5 | 21 | 157 | 24 | 137 | 6.22e-24 | 95.5 |
MsG0880044436.01.T02 | MTR_5g006040 | 31.410 | 156 | 105 | 1 | 7 | 162 | 9 | 162 | 1.31e-22 | 93.2 |
MsG0880044436.01.T02 | MTR_4g112310 | 42.056 | 107 | 60 | 1 | 40 | 146 | 2 | 106 | 3.24e-22 | 90.5 |
MsG0880044436.01.T02 | MTR_4g130780 | 33.333 | 120 | 75 | 4 | 7 | 121 | 10 | 129 | 3.57e-19 | 83.6 |
MsG0880044436.01.T02 | MTR_2g088990 | 32.812 | 128 | 82 | 3 | 4 | 130 | 5 | 129 | 1.61e-18 | 83.2 |
MsG0880044436.01.T02 | MTR_2g025580 | 34.146 | 123 | 72 | 4 | 11 | 132 | 15 | 129 | 3.61e-17 | 78.2 |
MsG0880044436.01.T02 | MTR_4g114870 | 38.000 | 100 | 60 | 1 | 24 | 121 | 191 | 290 | 3.67e-17 | 81.3 |
MsG0880044436.01.T02 | MTR_4g114870 | 31.852 | 135 | 83 | 2 | 10 | 135 | 8 | 142 | 1.40e-16 | 79.7 |
MsG0880044436.01.T02 | MTR_1g090420 | 29.744 | 195 | 119 | 7 | 11 | 202 | 15 | 194 | 5.84e-17 | 78.6 |
MsG0880044436.01.T02 | MTR_0334s0010 | 35.897 | 117 | 72 | 3 | 7 | 121 | 10 | 125 | 7.39e-17 | 77.8 |
MsG0880044436.01.T02 | MTR_4g130800 | 33.333 | 123 | 78 | 4 | 5 | 123 | 9 | 131 | 1.83e-16 | 78.2 |
MsG0880044436.01.T02 | MTR_1g077790 | 32.692 | 104 | 67 | 1 | 21 | 121 | 26 | 129 | 4.85e-16 | 75.5 |
MsG0880044436.01.T02 | MTR_5g088000 | 34.559 | 136 | 82 | 5 | 5 | 137 | 1 | 132 | 5.55e-16 | 73.9 |
MsG0880044436.01.T02 | MTR_8g099220 | 33.065 | 124 | 77 | 2 | 4 | 121 | 4 | 127 | 9.78e-16 | 72.8 |
MsG0880044436.01.T02 | MTR_3g099570 | 35.461 | 141 | 84 | 4 | 1 | 138 | 1 | 137 | 1.73e-15 | 73.6 |
MsG0880044436.01.T02 | MTR_6g083240 | 34.483 | 174 | 90 | 6 | 7 | 174 | 8 | 163 | 2.79e-15 | 72.8 |
MsG0880044436.01.T02 | MTR_1g104800 | 30.357 | 112 | 78 | 0 | 11 | 122 | 12 | 123 | 4.43e-15 | 72.4 |
MsG0880044436.01.T02 | MTR_4g114830 | 37.097 | 124 | 72 | 4 | 16 | 134 | 20 | 142 | 5.02e-15 | 72.0 |
MsG0880044436.01.T02 | MTR_4g067200 | 32.117 | 137 | 80 | 5 | 7 | 137 | 10 | 139 | 5.62e-15 | 72.0 |
MsG0880044436.01.T02 | MTR_4g066110 | 32.117 | 137 | 80 | 5 | 7 | 137 | 10 | 139 | 5.62e-15 | 72.0 |
MsG0880044436.01.T02 | MTR_1g090190 | 32.895 | 152 | 92 | 4 | 18 | 162 | 17 | 165 | 7.09e-15 | 72.0 |
MsG0880044436.01.T02 | MTR_6g013420 | 36.957 | 138 | 78 | 5 | 1 | 135 | 17 | 148 | 1.71e-14 | 70.9 |
MsG0880044436.01.T02 | MTR_4g130800 | 37.805 | 82 | 51 | 0 | 42 | 123 | 49 | 130 | 2.46e-14 | 72.0 |
MsG0880044436.01.T02 | MTR_8g007020 | 38.365 | 159 | 80 | 8 | 5 | 153 | 6 | 156 | 2.56e-14 | 70.5 |
MsG0880044436.01.T02 | MTR_1g112700 | 28.289 | 152 | 100 | 4 | 3 | 150 | 12 | 158 | 4.52e-14 | 69.7 |
MsG0880044436.01.T02 | MTR_3g099580 | 37.903 | 124 | 70 | 4 | 1 | 121 | 1 | 120 | 2.84e-13 | 67.4 |
MsG0880044436.01.T02 | MTR_8g007035 | 36.667 | 120 | 70 | 4 | 5 | 122 | 6 | 121 | 3.43e-13 | 67.8 |
MsG0880044436.01.T02 | MTR_6g013200 | 37.500 | 120 | 69 | 4 | 5 | 121 | 15 | 131 | 4.53e-13 | 66.6 |
MsG0880044436.01.T02 | MTR_7g086090 | 31.933 | 119 | 78 | 2 | 4 | 121 | 5 | 121 | 1.01e-12 | 67.0 |
MsG0880044436.01.T02 | MTR_7g086100 | 32.500 | 120 | 75 | 3 | 5 | 122 | 7 | 122 | 3.72e-12 | 65.1 |
MsG0880044436.01.T02 | MTR_6g080660 | 32.773 | 119 | 73 | 3 | 3 | 121 | 11 | 122 | 4.67e-12 | 64.7 |
MsG0880044436.01.T02 | MTR_3g099680 | 36.000 | 100 | 61 | 2 | 23 | 121 | 25 | 122 | 1.37e-11 | 63.5 |
MsG0880044436.01.T02 | MTR_3g099540 | 33.333 | 114 | 72 | 3 | 4 | 117 | 8 | 117 | 1.49e-11 | 61.2 |
MsG0880044436.01.T02 | MTR_6g023760 | 35.052 | 97 | 59 | 3 | 26 | 121 | 28 | 121 | 2.87e-11 | 61.6 |
MsG0880044436.01.T02 | MTR_8g089110 | 33.043 | 115 | 72 | 2 | 5 | 119 | 9 | 118 | 6.52e-11 | 59.3 |
MsG0880044436.01.T02 | MTR_3g099980 | 36.000 | 100 | 61 | 2 | 23 | 121 | 25 | 122 | 7.60e-11 | 61.2 |
MsG0880044436.01.T03 | MTR_8g463180 | 83.525 | 261 | 38 | 3 | 36 | 296 | 48 | 303 | 2.13e-101 | 299 |
MsG0880044436.01.T03 | MTR_2g079030 | 48.295 | 176 | 66 | 5 | 36 | 211 | 49 | 199 | 5.08e-34 | 130 |
MsG0880044436.01.T03 | MTR_2g090575 | 37.762 | 286 | 153 | 10 | 1 | 264 | 12 | 294 | 1.49e-33 | 126 |
MsG0880044436.01.T03 | MTR_2g090580 | 45.139 | 144 | 57 | 5 | 36 | 173 | 51 | 178 | 2.52e-29 | 110 |
MsG0880044436.01.T03 | MTR_8g095013 | 37.860 | 243 | 118 | 8 | 36 | 260 | 50 | 277 | 2.04e-28 | 111 |
MsG0880044436.01.T03 | MTR_8g094990 | 38.537 | 205 | 103 | 4 | 36 | 220 | 50 | 251 | 4.07e-27 | 107 |
MsG0880044436.01.T03 | MTR_3g092170 | 39.378 | 193 | 84 | 6 | 28 | 214 | 42 | 207 | 4.51e-27 | 107 |
MsG0880044436.01.T03 | MTR_4g124280 | 37.097 | 186 | 95 | 4 | 36 | 221 | 51 | 214 | 5.58e-26 | 103 |
MsG0880044436.01.T03 | MTR_3g105930 | 45.536 | 112 | 52 | 2 | 36 | 147 | 54 | 156 | 2.50e-25 | 99.8 |
MsG0880044436.01.T03 | MTR_8g095020 | 37.069 | 232 | 104 | 9 | 36 | 245 | 50 | 261 | 5.65e-25 | 102 |
MsG0880044436.01.T03 | MTR_1g014120 | 47.500 | 80 | 42 | 0 | 34 | 113 | 50 | 129 | 8.06e-24 | 95.9 |
MsG0880044436.01.T03 | MTR_8g086360 | 51.282 | 78 | 38 | 0 | 45 | 122 | 57 | 134 | 2.41e-21 | 89.7 |
MsG0880044436.01.T03 | MTR_4g081100 | 52.113 | 71 | 34 | 0 | 43 | 113 | 65 | 135 | 1.09e-20 | 88.6 |
MsG0880044436.01.T03 | MTR_4g078410 | 43.750 | 80 | 45 | 0 | 34 | 113 | 47 | 126 | 5.41e-20 | 85.9 |
MsG0880044436.01.T03 | MTR_6g022170 | 51.948 | 77 | 35 | 1 | 43 | 119 | 68 | 142 | 8.55e-19 | 82.0 |
MsG0880044436.01.T03 | MTR_2g101300 | 48.101 | 79 | 39 | 1 | 43 | 121 | 61 | 137 | 3.75e-18 | 80.9 |
MsG0880044436.01.T03 | MTR_2g083250 | 38.824 | 85 | 51 | 1 | 36 | 119 | 53 | 137 | 1.96e-16 | 77.8 |
MsG0880044436.01.T03 | MTR_7g090170 | 36.364 | 110 | 44 | 3 | 36 | 145 | 54 | 137 | 2.77e-13 | 66.6 |
MsG0880044436.01.T03 | MTR_4g077787 | 36.842 | 95 | 56 | 2 | 36 | 130 | 60 | 150 | 8.23e-13 | 65.9 |
MsG0880044436.01.T03 | MTR_4g112310 | 36.364 | 99 | 61 | 1 | 36 | 134 | 10 | 106 | 9.72e-13 | 64.7 |
MsG0880044436.01.T03 | MTR_4g130780 | 38.806 | 67 | 41 | 0 | 43 | 109 | 63 | 129 | 1.71e-12 | 65.1 |
MsG0880044436.01.T03 | MTR_4g111640 | 33.621 | 116 | 68 | 3 | 36 | 150 | 60 | 167 | 1.97e-12 | 65.1 |
MsG0880044436.01.T03 | MTR_2g088990 | 35.294 | 85 | 54 | 1 | 34 | 118 | 46 | 129 | 4.26e-12 | 65.1 |
MsG0880044436.01.T03 | MTR_4g130800 | 35.897 | 78 | 50 | 0 | 34 | 111 | 54 | 131 | 7.64e-11 | 62.0 |
MsG0880044436.01.T03 | MTR_4g130800 | 35.897 | 78 | 50 | 0 | 34 | 111 | 53 | 130 | 8.98e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880044436.01.T01 | AT4G28365 | 44.388 | 196 | 89 | 5 | 1 | 189 | 5 | 187 | 4.15e-50 | 163 |
MsG0880044436.01.T01 | AT4G27520 | 50.649 | 154 | 65 | 2 | 1 | 150 | 4 | 150 | 1.13e-49 | 166 |
MsG0880044436.01.T01 | AT5G53870 | 45.405 | 185 | 97 | 2 | 7 | 187 | 13 | 197 | 2.79e-48 | 163 |
MsG0880044436.01.T01 | AT5G53870 | 45.405 | 185 | 97 | 2 | 7 | 187 | 13 | 197 | 2.79e-48 | 163 |
MsG0880044436.01.T01 | AT4G32490 | 43.671 | 158 | 82 | 1 | 16 | 166 | 23 | 180 | 1.24e-41 | 142 |
MsG0880044436.01.T01 | AT2G25060 | 45.294 | 170 | 75 | 6 | 4 | 170 | 13 | 167 | 1.18e-38 | 133 |
MsG0880044436.01.T01 | AT4G31840 | 46.452 | 155 | 78 | 4 | 5 | 155 | 8 | 161 | 2.96e-38 | 132 |
MsG0880044436.01.T01 | AT3G20570 | 40.000 | 165 | 95 | 2 | 9 | 169 | 15 | 179 | 3.12e-37 | 130 |
MsG0880044436.01.T01 | AT5G57920 | 37.500 | 152 | 89 | 3 | 8 | 153 | 6 | 157 | 9.04e-34 | 120 |
MsG0880044436.01.T01 | AT5G57920 | 39.716 | 141 | 79 | 3 | 19 | 153 | 18 | 158 | 1.52e-33 | 120 |
MsG0880044436.01.T01 | AT5G57920 | 39.716 | 141 | 79 | 3 | 19 | 153 | 50 | 190 | 2.74e-33 | 120 |
MsG0880044436.01.T01 | AT4G30590 | 43.182 | 132 | 68 | 3 | 1 | 125 | 1 | 132 | 7.46e-33 | 118 |
MsG0880044436.01.T01 | AT5G25090 | 43.548 | 124 | 67 | 2 | 5 | 125 | 7 | 130 | 1.97e-32 | 117 |
MsG0880044436.01.T01 | AT2G23990 | 44.882 | 127 | 66 | 3 | 5 | 127 | 8 | 134 | 7.26e-31 | 114 |
MsG0880044436.01.T01 | AT1G48940 | 45.082 | 122 | 57 | 3 | 5 | 122 | 11 | 126 | 2.44e-27 | 103 |
MsG0880044436.01.T01 | AT3G18590 | 45.902 | 122 | 59 | 3 | 5 | 122 | 9 | 127 | 2.03e-26 | 101 |
MsG0880044436.01.T01 | AT1G79800 | 38.667 | 150 | 75 | 5 | 4 | 145 | 11 | 151 | 4.10e-26 | 100 |
MsG0880044436.01.T01 | AT2G23990 | 39.041 | 146 | 66 | 4 | 5 | 127 | 8 | 153 | 5.42e-26 | 101 |
MsG0880044436.01.T01 | AT5G14345 | 39.535 | 129 | 71 | 4 | 9 | 134 | 2 | 126 | 1.51e-25 | 98.2 |
MsG0880044436.01.T01 | AT2G31050 | 40.367 | 109 | 64 | 1 | 26 | 134 | 31 | 138 | 1.90e-21 | 89.0 |
MsG0880044436.01.T01 | AT5G26330 | 32.099 | 162 | 105 | 1 | 12 | 173 | 12 | 168 | 7.72e-20 | 84.3 |
MsG0880044436.01.T01 | AT2G26720 | 38.144 | 97 | 59 | 1 | 26 | 122 | 31 | 126 | 4.55e-18 | 80.1 |
MsG0880044436.01.T01 | AT5G07475 | 30.247 | 162 | 104 | 3 | 1 | 162 | 7 | 159 | 4.74e-18 | 79.7 |
MsG0880044436.01.T01 | AT2G32300 | 31.081 | 148 | 93 | 2 | 10 | 157 | 12 | 150 | 6.91e-18 | 80.5 |
MsG0880044436.01.T01 | AT2G32300 | 31.081 | 148 | 93 | 2 | 10 | 157 | 42 | 180 | 4.42e-17 | 79.0 |
MsG0880044436.01.T01 | AT3G17675 | 31.092 | 119 | 78 | 2 | 5 | 121 | 11 | 127 | 3.42e-16 | 73.2 |
MsG0880044436.01.T01 | AT5G15350 | 34.677 | 124 | 76 | 3 | 23 | 144 | 28 | 148 | 1.22e-14 | 70.1 |
MsG0880044436.01.T01 | AT1G64640 | 32.500 | 120 | 79 | 2 | 24 | 142 | 33 | 151 | 1.43e-14 | 70.1 |
MsG0880044436.01.T01 | AT2G27035 | 30.769 | 143 | 93 | 5 | 10 | 151 | 15 | 152 | 1.10e-13 | 67.4 |
MsG0880044436.01.T01 | AT4G12880 | 35.644 | 101 | 60 | 3 | 23 | 121 | 28 | 125 | 8.60e-13 | 64.3 |
MsG0880044436.01.T01 | AT5G20230 | 33.663 | 101 | 64 | 2 | 24 | 122 | 25 | 124 | 1.10e-12 | 65.1 |
MsG0880044436.01.T01 | AT1G72230 | 31.933 | 119 | 70 | 2 | 3 | 121 | 10 | 117 | 1.67e-12 | 64.3 |
MsG0880044436.01.T01 | AT3G27200 | 28.800 | 125 | 83 | 4 | 1 | 122 | 1 | 122 | 3.08e-12 | 63.5 |
MsG0880044436.01.T01 | AT3G60270 | 35.075 | 134 | 72 | 3 | 21 | 154 | 23 | 141 | 1.16e-11 | 62.4 |
MsG0880044436.01.T01 | AT1G45063 | 30.702 | 114 | 77 | 2 | 10 | 122 | 15 | 127 | 2.98e-11 | 62.4 |
MsG0880044436.01.T01 | AT1G45063 | 30.702 | 114 | 77 | 2 | 10 | 122 | 15 | 127 | 7.83e-11 | 61.6 |
MsG0880044436.01.T02 | AT5G53870 | 42.164 | 268 | 140 | 7 | 8 | 273 | 12 | 266 | 3.11e-50 | 171 |
MsG0880044436.01.T02 | AT5G53870 | 48.958 | 192 | 80 | 5 | 8 | 197 | 12 | 187 | 3.53e-50 | 170 |
MsG0880044436.01.T02 | AT4G27520 | 54.962 | 131 | 55 | 1 | 1 | 127 | 4 | 134 | 4.39e-50 | 169 |
MsG0880044436.01.T02 | AT4G28365 | 46.961 | 181 | 85 | 5 | 1 | 173 | 5 | 182 | 9.69e-48 | 159 |
MsG0880044436.01.T02 | AT4G32490 | 51.852 | 108 | 52 | 0 | 16 | 123 | 23 | 130 | 1.78e-41 | 143 |
MsG0880044436.01.T02 | AT2G25060 | 43.103 | 174 | 77 | 5 | 4 | 174 | 13 | 167 | 3.91e-38 | 134 |
MsG0880044436.01.T02 | AT4G31840 | 45.578 | 147 | 76 | 3 | 5 | 148 | 8 | 153 | 3.36e-36 | 128 |
MsG0880044436.01.T02 | AT3G20570 | 39.394 | 165 | 81 | 3 | 9 | 154 | 15 | 179 | 2.51e-35 | 127 |
MsG0880044436.01.T02 | AT5G57920 | 34.463 | 177 | 101 | 4 | 8 | 181 | 6 | 170 | 5.81e-33 | 120 |
MsG0880044436.01.T02 | AT5G57920 | 36.145 | 166 | 91 | 4 | 19 | 181 | 18 | 171 | 6.64e-33 | 120 |
MsG0880044436.01.T02 | AT5G57920 | 36.145 | 166 | 91 | 4 | 19 | 181 | 50 | 203 | 1.41e-32 | 120 |
MsG0880044436.01.T02 | AT5G25090 | 44.628 | 121 | 64 | 2 | 8 | 125 | 10 | 130 | 7.07e-32 | 117 |
MsG0880044436.01.T02 | AT4G30590 | 38.323 | 167 | 80 | 4 | 1 | 160 | 1 | 151 | 2.26e-31 | 116 |
MsG0880044436.01.T02 | AT2G23990 | 44.882 | 127 | 66 | 3 | 5 | 127 | 8 | 134 | 1.79e-30 | 114 |
MsG0880044436.01.T02 | AT1G48940 | 45.082 | 122 | 57 | 3 | 5 | 122 | 11 | 126 | 5.66e-27 | 104 |
MsG0880044436.01.T02 | AT1G79800 | 39.735 | 151 | 73 | 5 | 4 | 146 | 11 | 151 | 1.75e-26 | 103 |
MsG0880044436.01.T02 | AT3G18590 | 45.902 | 122 | 59 | 3 | 5 | 122 | 9 | 127 | 1.24e-25 | 101 |
MsG0880044436.01.T02 | AT2G23990 | 39.041 | 146 | 66 | 4 | 5 | 127 | 8 | 153 | 1.28e-25 | 102 |
MsG0880044436.01.T02 | AT5G14345 | 43.636 | 110 | 56 | 3 | 28 | 134 | 20 | 126 | 6.17e-25 | 98.2 |
MsG0880044436.01.T02 | AT2G31050 | 40.367 | 109 | 64 | 1 | 26 | 134 | 31 | 138 | 1.54e-20 | 87.8 |
MsG0880044436.01.T02 | AT5G26330 | 34.513 | 113 | 74 | 0 | 12 | 124 | 12 | 124 | 7.49e-18 | 80.5 |
MsG0880044436.01.T02 | AT2G26720 | 35.669 | 157 | 89 | 4 | 26 | 181 | 31 | 176 | 1.54e-17 | 80.1 |
MsG0880044436.01.T02 | AT5G07475 | 32.192 | 146 | 92 | 4 | 1 | 143 | 7 | 148 | 3.60e-17 | 78.6 |
MsG0880044436.01.T02 | AT2G32300 | 32.847 | 137 | 89 | 2 | 10 | 145 | 12 | 146 | 1.78e-16 | 78.2 |
MsG0880044436.01.T02 | AT3G17675 | 31.092 | 119 | 78 | 2 | 5 | 121 | 11 | 127 | 2.95e-15 | 71.6 |
MsG0880044436.01.T02 | AT2G32300 | 32.847 | 137 | 89 | 2 | 10 | 145 | 42 | 176 | 3.55e-15 | 74.7 |
MsG0880044436.01.T02 | AT3G60270 | 37.864 | 103 | 59 | 3 | 21 | 122 | 23 | 121 | 1.60e-14 | 71.2 |
MsG0880044436.01.T02 | AT5G15350 | 35.833 | 120 | 72 | 3 | 23 | 140 | 28 | 144 | 3.96e-14 | 69.7 |
MsG0880044436.01.T02 | AT1G64640 | 32.773 | 119 | 78 | 2 | 24 | 141 | 33 | 150 | 1.60e-13 | 68.6 |
MsG0880044436.01.T02 | AT4G12880 | 35.644 | 101 | 60 | 3 | 23 | 121 | 28 | 125 | 1.64e-12 | 64.3 |
MsG0880044436.01.T02 | AT2G27035 | 30.065 | 153 | 88 | 6 | 10 | 161 | 15 | 149 | 2.43e-12 | 64.3 |
MsG0880044436.01.T02 | AT5G20230 | 33.333 | 102 | 65 | 2 | 23 | 122 | 24 | 124 | 3.85e-12 | 64.7 |
MsG0880044436.01.T02 | AT1G72230 | 32.773 | 119 | 69 | 3 | 3 | 121 | 10 | 117 | 2.51e-11 | 62.0 |
MsG0880044436.01.T02 | AT3G27200 | 28.800 | 125 | 83 | 4 | 1 | 122 | 1 | 122 | 5.96e-11 | 60.8 |
MsG0880044436.01.T03 | AT4G27520 | 57.500 | 80 | 34 | 0 | 36 | 115 | 55 | 134 | 1.35e-30 | 118 |
MsG0880044436.01.T03 | AT5G53870 | 47.333 | 150 | 63 | 4 | 36 | 185 | 54 | 187 | 4.27e-30 | 117 |
MsG0880044436.01.T03 | AT5G53870 | 47.333 | 150 | 63 | 4 | 36 | 185 | 54 | 187 | 5.21e-30 | 117 |
MsG0880044436.01.T03 | AT2G25060 | 48.333 | 120 | 45 | 2 | 43 | 162 | 65 | 167 | 2.60e-29 | 110 |
MsG0880044436.01.T03 | AT4G31840 | 54.255 | 94 | 42 | 1 | 43 | 136 | 61 | 153 | 1.19e-26 | 103 |
MsG0880044436.01.T03 | AT4G28365 | 43.609 | 133 | 65 | 4 | 36 | 161 | 53 | 182 | 2.97e-24 | 97.8 |
MsG0880044436.01.T03 | AT4G30590 | 44.340 | 106 | 43 | 1 | 43 | 148 | 62 | 151 | 4.45e-23 | 94.4 |
MsG0880044436.01.T03 | AT5G57920 | 47.143 | 70 | 37 | 0 | 43 | 112 | 57 | 126 | 1.49e-22 | 92.8 |
MsG0880044436.01.T03 | AT5G57920 | 33.858 | 127 | 72 | 2 | 43 | 169 | 89 | 203 | 1.54e-22 | 93.6 |
MsG0880044436.01.T03 | AT5G57920 | 33.858 | 127 | 72 | 2 | 43 | 169 | 56 | 170 | 2.92e-22 | 92.0 |
MsG0880044436.01.T03 | AT3G20570 | 38.136 | 118 | 55 | 2 | 43 | 142 | 62 | 179 | 3.23e-20 | 87.0 |
MsG0880044436.01.T03 | AT4G32490 | 46.053 | 76 | 41 | 0 | 36 | 111 | 55 | 130 | 1.12e-19 | 85.9 |
MsG0880044436.01.T03 | AT5G25090 | 43.750 | 80 | 45 | 0 | 34 | 113 | 51 | 130 | 1.73e-19 | 84.7 |
MsG0880044436.01.T03 | AT2G23990 | 44.318 | 88 | 48 | 1 | 29 | 115 | 66 | 153 | 2.19e-19 | 85.1 |
MsG0880044436.01.T03 | AT2G23990 | 46.988 | 83 | 43 | 1 | 34 | 115 | 52 | 134 | 3.57e-19 | 84.3 |
MsG0880044436.01.T03 | AT5G14345 | 46.341 | 82 | 40 | 3 | 42 | 122 | 48 | 126 | 6.51e-16 | 73.6 |
MsG0880044436.01.T03 | AT1G79800 | 42.222 | 90 | 44 | 2 | 45 | 134 | 70 | 151 | 1.14e-15 | 74.3 |
MsG0880044436.01.T03 | AT1G48940 | 51.471 | 68 | 31 | 1 | 43 | 110 | 61 | 126 | 8.42e-13 | 65.9 |
MsG0880044436.01.T03 | AT3G18590 | 53.030 | 66 | 29 | 1 | 45 | 110 | 64 | 127 | 1.18e-12 | 65.9 |
Find 121 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTAGCTCCTTCGAGCTTTC+TGG | 0.120831 | 8:-42025230 | MsG0880044436.01.T01:CDS |
TTTGAGTTACTGAGACATTT+TGG | 0.175428 | 8:-42025173 | MsG0880044436.01.T02:exon |
GTTGTATGTAATAAATTATT+CGG | 0.253458 | 8:-42025101 | MsG0880044436.01.T02:three_prime_UTR |
CGCTGGAGCTGCTGCTCCCC+CGG | 0.274437 | 8:+42025303 | None:intergenic |
CTTGGTGAAGGAGATGATTT+TGG | 0.279381 | 8:+42025706 | None:intergenic |
TTTGTATAATAACAATAAAA+TGG | 0.306355 | 8:-42024935 | MsG0880044436.01.T02:three_prime_UTR |
TTGTATGTAATAAATTATTC+GGG | 0.307875 | 8:-42025100 | MsG0880044436.01.T02:three_prime_UTR |
CCTGGTGCCGGAGGACCACC+TGG | 0.315403 | 8:+42025388 | None:intergenic |
CCATCTTCGAATTTCTTGAT+TGG | 0.318575 | 8:+42025844 | None:intergenic |
GCCGGAACAGGGGAGCTTGC+TGG | 0.319581 | 8:+42025595 | None:intergenic |
CATCTTCGAATTTCTTGATT+GGG | 0.341423 | 8:+42025845 | None:intergenic |
GGTCCTCCGGCACCAGGACC+CGG | 0.348865 | 8:-42025382 | MsG0880044436.01.T01:CDS |
GTAGGTCCACCTGCCGGAAC+AGG | 0.370740 | 8:+42025583 | None:intergenic |
CCATCAGGGGCACCAGGACC+CGG | 0.380832 | 8:-42025346 | MsG0880044436.01.T01:CDS |
TCCTGGTGCAGCTGATCCCC+CGG | 0.383431 | 8:+42025327 | None:intergenic |
TCCAGCAAGCTCCCCTGTTC+CGG | 0.383709 | 8:-42025596 | MsG0880044436.01.T01:intron |
GGATCAGCTGCACCAGGACC+CGG | 0.386077 | 8:-42025322 | MsG0880044436.01.T01:CDS |
TGATGGAGTCGCTGCTCCCC+CGG | 0.392645 | 8:+42025363 | None:intergenic |
GGAGGACCACCTGGGGTAGA+TGG | 0.400324 | 8:+42025397 | None:intergenic |
CCGGGTCCTGGTGCCCCTGA+TGG | 0.429925 | 8:+42025346 | None:intergenic |
ATCTAATTCAACTGCACCAC+CGG | 0.438406 | 8:-42025269 | MsG0880044436.01.T01:CDS |
AAAAGATCAAAACTGTGAAA+AGG | 0.439027 | 8:-42025770 | MsG0880044436.01.T01:CDS |
AGCACCAACGGCAAGGGTTA+CGG | 0.440891 | 8:+42025201 | None:intergenic |
AGCTCCCCTGTTCCGGCAGG+TGG | 0.444845 | 8:-42025589 | MsG0880044436.01.T01:intron |
GTCCTCCGGCACCAGGACCC+GGG | 0.445759 | 8:-42025381 | MsG0880044436.01.T01:CDS |
GATCAGCTGCACCAGGACCC+GGG | 0.447402 | 8:-42025321 | MsG0880044436.01.T01:CDS |
CATCAGGGGCACCAGGACCC+GGG | 0.448864 | 8:-42025345 | MsG0880044436.01.T01:CDS |
CCACCTGCTGGTGAAGGAGC+TGG | 0.452499 | 8:+42025421 | None:intergenic |
AAAGATCAAAACTGTGAAAA+GGG | 0.454501 | 8:-42025769 | MsG0880044436.01.T01:CDS |
GCTGGAGGTGTGCTCACTAC+TGG | 0.459593 | 8:+42025487 | None:intergenic |
ACCTCCGGCTGGTGGACCTA+TGG | 0.461437 | 8:-42025530 | MsG0880044436.01.T01:intron |
ATCTACCCCAGGTGGTCCTC+CGG | 0.464508 | 8:-42025395 | MsG0880044436.01.T01:CDS |
TCTCCTTCACCAAGTGGTGG+TGG | 0.464912 | 8:-42025697 | MsG0880044436.01.T01:intron |
GCAGCTCCAGCGGGGTCACC+AGG | 0.465912 | 8:-42025292 | MsG0880044436.01.T01:CDS |
GCCGGAGGTGTGCTCACTAC+TGG | 0.466620 | 8:+42025544 | None:intergenic |
CCAGGTGGTCCTCCGGCACC+AGG | 0.488155 | 8:-42025388 | MsG0880044436.01.T01:CDS |
TTTCCACTGATGAAATAGAA+TGG | 0.497104 | 8:+42025790 | None:intergenic |
CAATGATACACAGATATCAT+AGG | 0.497457 | 8:+42024966 | None:intergenic |
GGAGCTGGTGGTCCACCTGC+CGG | 0.504880 | 8:+42025436 | None:intergenic |
GGTGGTCCACCTGCCGGAGA+AGG | 0.507316 | 8:+42025442 | None:intergenic |
GAGTTCACTTTGGACAGAGC+AGG | 0.508058 | 8:-42025814 | MsG0880044436.01.T01:CDS |
GCAAGCTCCCCTGTTCCGGC+AGG | 0.508253 | 8:-42025592 | MsG0880044436.01.T01:intron |
GCTTCATCTCCTTCTCCGGC+AGG | 0.510071 | 8:-42025451 | MsG0880044436.01.T01:CDS |
TTAGATCCTGGTGACCCCGC+TGG | 0.511126 | 8:+42025286 | None:intergenic |
ACCTCCAGCCGGTGGACCTA+CGG | 0.511871 | 8:-42025473 | MsG0880044436.01.T01:CDS |
GCGACTCCATCAGGGGCACC+AGG | 0.515771 | 8:-42025352 | MsG0880044436.01.T01:CDS |
TCCTCCGGCACCAGGACCCG+GGG | 0.517479 | 8:-42025380 | MsG0880044436.01.T01:CDS |
ATCAGCTGCACCAGGACCCG+GGG | 0.524267 | 8:-42025320 | MsG0880044436.01.T01:CDS |
ATCAGGGGCACCAGGACCCG+GGG | 0.524267 | 8:-42025344 | MsG0880044436.01.T01:CDS |
CCACCAGCTCCTTCACCAGC+AGG | 0.525764 | 8:-42025424 | MsG0880044436.01.T01:CDS |
CCAATCAAGAAATTCGAAGA+TGG | 0.535933 | 8:-42025844 | MsG0880044436.01.T01:CDS |
TGTTCCGGCAGGTGGACCTA+CGG | 0.546014 | 8:-42025581 | MsG0880044436.01.T01:intron |
TACGGCTTCATCTCCTTCTC+CGG | 0.546654 | 8:-42025455 | MsG0880044436.01.T01:CDS |
AGATGAAGCCGTAGGTCCAC+CGG | 0.546744 | 8:+42025465 | None:intergenic |
GAAGCCGTAGGTCCACCGGC+TGG | 0.549612 | 8:+42025469 | None:intergenic |
CTCACTACTGGAGATGGAGA+TGG | 0.551978 | 8:+42025499 | None:intergenic |
GTGAGCACACCTCCGGCTGG+TGG | 0.552623 | 8:-42025538 | MsG0880044436.01.T01:intron |
CTTGCTGGAGGAGTAGCCAC+TGG | 0.553256 | 8:+42025610 | None:intergenic |
CTGGTGCCGGAGGACCACCT+GGG | 0.554629 | 8:+42025389 | None:intergenic |
GGGGAGCAGCGACTCCATCA+GGG | 0.561209 | 8:-42025360 | MsG0880044436.01.T01:CDS |
GGGGTAGATGGACCACCTGC+TGG | 0.561965 | 8:+42025409 | None:intergenic |
TCCAGTAGTGAGCACACCTC+CGG | 0.562951 | 8:-42025545 | MsG0880044436.01.T01:intron |
GGTGTGCTCACTACTGGAGA+TGG | 0.563208 | 8:+42025550 | None:intergenic |
TAGGTCCACCTGCCGGAACA+GGG | 0.566664 | 8:+42025584 | None:intergenic |
TATTCCGTAACCCTTGCCGT+TGG | 0.568597 | 8:-42025205 | MsG0880044436.01.T01:CDS |
TCATCTCCTTCTCCGGCAGG+TGG | 0.568679 | 8:-42025448 | MsG0880044436.01.T01:CDS |
CCTGCTGGTGAAGGAGCTGG+TGG | 0.574961 | 8:+42025424 | None:intergenic |
GGGCCATTCTATTTCATCAG+TGG | 0.577208 | 8:-42025793 | MsG0880044436.01.T01:CDS |
GATGGACCACCTGCTGGTGA+AGG | 0.578374 | 8:+42025415 | None:intergenic |
GCAGGTGGTCCATCTACCCC+AGG | 0.581538 | 8:-42025406 | MsG0880044436.01.T01:CDS |
AGTTCACTTTGGACAGAGCA+GGG | 0.582623 | 8:-42025813 | MsG0880044436.01.T01:CDS |
GAAGGGTTCAGACTCGGTGT+TGG | 0.583480 | 8:-42025908 | MsG0880044436.01.T01:CDS |
GGTGTGCTCACTACTGGAGA+TGG | 0.585001 | 8:+42025493 | None:intergenic |
AAAACAGAGCACCAACGGCA+AGG | 0.585538 | 8:+42025194 | None:intergenic |
AAACAGAGCACCAACGGCAA+GGG | 0.586517 | 8:+42025195 | None:intergenic |
GTAGTGAGCACACCTCCGGC+TGG | 0.586869 | 8:-42025541 | MsG0880044436.01.T01:intron |
GTTGTCGTTGGTGACGGTGA+AGG | 0.587432 | 8:+42025664 | None:intergenic |
GGGAGCAGCGACTCCATCAG+GGG | 0.587521 | 8:-42025359 | MsG0880044436.01.T01:CDS |
GGTGGTGAAACAGAGGGTGA+TGG | 0.589277 | 8:+42025637 | None:intergenic |
GGTGATGGAGTGGTTGTCGT+TGG | 0.590401 | 8:+42025652 | None:intergenic |
GGTGATAAGCCACCACCACT+TGG | 0.595997 | 8:+42025688 | None:intergenic |
GGAGTGGTTGTCGTTGGTGA+CGG | 0.597376 | 8:+42025658 | None:intergenic |
GCCGTAGGTCCACCGGCTGG+AGG | 0.602135 | 8:+42025472 | None:intergenic |
AGGTCCACCTGCCGGAACAG+GGG | 0.603644 | 8:+42025585 | None:intergenic |
ACAAATGAACCACTGCTACC+CGG | 0.604696 | 8:+42025250 | None:intergenic |
GGAGGAGTAGCCACTGGAGA+TGG | 0.607050 | 8:+42025616 | None:intergenic |
GTAGTGAGCACACCTCCAGC+CGG | 0.608290 | 8:-42025484 | MsG0880044436.01.T01:CDS |
GTACAAGAAGGGTTCAGACT+CGG | 0.611620 | 8:-42025914 | MsG0880044436.01.T01:CDS |
TGGTGATACAGAGTTCACTT+TGG | 0.612356 | 8:-42025824 | MsG0880044436.01.T01:CDS |
GTCGTTGGTGACGGTGAAGG+TGG | 0.613000 | 8:+42025667 | None:intergenic |
GTGAGCACACCTCCAGCCGG+TGG | 0.614961 | 8:-42025481 | MsG0880044436.01.T01:CDS |
GGAGATGGAGATGATGCCAT+AGG | 0.617212 | 8:+42025514 | None:intergenic |
AAGCCACCACCACTTGGTGA+AGG | 0.618943 | 8:+42025694 | None:intergenic |
TCTAATTCAACTGCACCACC+GGG | 0.619239 | 8:-42025268 | MsG0880044436.01.T01:CDS |
GCCATAGGTCCACCAGCCGG+AGG | 0.620945 | 8:+42025529 | None:intergenic |
GGTGCAGTTGAATTAGATCC+TGG | 0.624618 | 8:+42025274 | None:intergenic |
ACTGCACCACCGGGTAGCAG+TGG | 0.628398 | 8:-42025259 | MsG0880044436.01.T01:CDS |
TTCGTGGAGTTATAACAACA+AGG | 0.629941 | 8:+42025734 | None:intergenic |
TGTTTCACCACCATCTCCAG+TGG | 0.630571 | 8:-42025626 | MsG0880044436.01.T01:intron |
GGAACAGGGGAGCTTGCTGG+AGG | 0.630955 | 8:+42025598 | None:intergenic |
GATGCCATAGGTCCACCAGC+CGG | 0.631786 | 8:+42025526 | None:intergenic |
GGTGGTCCATCTACCCCAGG+TGG | 0.638552 | 8:-42025403 | MsG0880044436.01.T01:CDS |
GATGCCGTAGGTCCACCTGC+CGG | 0.639439 | 8:+42025577 | None:intergenic |
CCAGCTCCTTCACCAGCAGG+TGG | 0.640600 | 8:-42025421 | MsG0880044436.01.T01:CDS |
TGGTGCCGGAGGACCACCTG+GGG | 0.642391 | 8:+42025390 | None:intergenic |
TGAAACAGAGGGTGATGGAG+TGG | 0.649812 | 8:+42025642 | None:intergenic |
TGTATGTAATAAATTATTCG+GGG | 0.653970 | 8:-42025099 | MsG0880044436.01.T02:three_prime_UTR |
GGAGATGGAGATGATGCCGT+AGG | 0.662452 | 8:+42025565 | None:intergenic |
TCATCTCCTTCACCAAGTGG+TGG | 0.662715 | 8:-42025700 | MsG0880044436.01.T01:intron |
TCAGCTGCACCAGGACCCGG+GGG | 0.663432 | 8:-42025319 | MsG0880044436.01.T01:CDS |
AAATCATCTCCTTCACCAAG+TGG | 0.664193 | 8:-42025703 | MsG0880044436.01.T01:intron |
CCTCCGGCACCAGGACCCGG+GGG | 0.666079 | 8:-42025379 | MsG0880044436.01.T01:CDS |
TCAGGGGCACCAGGACCCGG+GGG | 0.668002 | 8:-42025343 | MsG0880044436.01.T01:CDS |
GGGGAGCAGCAGCTCCAGCG+GGG | 0.672067 | 8:-42025300 | MsG0880044436.01.T01:CDS |
GGAGAAGGAGATGAAGCCGT+AGG | 0.672907 | 8:+42025457 | None:intergenic |
TCGTGGAGTTATAACAACAA+GGG | 0.673218 | 8:+42025735 | None:intergenic |
GGAGTAGCCACTGGAGATGG+TGG | 0.673596 | 8:+42025619 | None:intergenic |
TGGAGATGGTGGTGAAACAG+AGG | 0.692022 | 8:+42025630 | None:intergenic |
GAATACACCAGAAAGCTCGA+AGG | 0.697343 | 8:+42025223 | None:intergenic |
AATGAACCACTGCTACCCGG+TGG | 0.713699 | 8:+42025253 | None:intergenic |
GGAGATGGTGGTGAAACAGA+GGG | 0.727650 | 8:+42025631 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTAAAATAATAATAAAGTG+GGG | + | Chr8:42025286-42025305 | None:intergenic | 10.0% |
!! | TTTGTATAATAACAATAAAA+TGG | - | Chr8:42026752-42026771 | MsG0880044436.01.T01:five_prime_UTR | 10.0% |
!!! | GTATATATGAAATTAATTTT+TGG | - | Chr8:42025452-42025471 | MsG0880044436.01.T01:CDS | 10.0% |
!!! | GTATTTTTTATTTTTTTAGA+AGG | - | Chr8:42025388-42025407 | MsG0880044436.01.T01:CDS | 10.0% |
!! | GTTGTATGTAATAAATTATT+CGG | - | Chr8:42026586-42026605 | MsG0880044436.01.T01:CDS | 15.0% |
!! | TTGTATGTAATAAATTATTC+GGG | - | Chr8:42026587-42026606 | MsG0880044436.01.T01:CDS | 15.0% |
!!! | TTTAAGTTGCAAAATTTTAT+AGG | + | Chr8:42025697-42025716 | None:intergenic | 15.0% |
!! | AAATTGAATGGAAAAAACAA+TGG | + | Chr8:42024983-42025002 | None:intergenic | 20.0% |
!! | AATTGAATGGAAAAAACAAT+GGG | + | Chr8:42024982-42025001 | None:intergenic | 20.0% |
!! | AGAACAACCATAAAAAAAAA+AGG | + | Chr8:42025644-42025663 | None:intergenic | 20.0% |
!! | ATATTGAATTGAATGGATAT+AGG | + | Chr8:42025066-42025085 | None:intergenic | 20.0% |
!! | TGTATGTAATAAATTATTCG+GGG | - | Chr8:42026588-42026607 | MsG0880044436.01.T01:intron | 20.0% |
!!! | ATGAAATTAATTTTTGGTCT+AGG | - | Chr8:42025458-42025477 | MsG0880044436.01.T01:CDS | 20.0% |
!!! | GTATGATCCTTTTTTTTTTA+TGG | - | Chr8:42025634-42025653 | MsG0880044436.01.T01:intron | 20.0% |
!!! | TGAAATTAATTTTTGGTCTA+GGG | - | Chr8:42025459-42025478 | MsG0880044436.01.T01:CDS | 20.0% |
!!! | TTTAGTTTTTTTTGTCTCTT+TGG | - | Chr8:42026637-42026656 | MsG0880044436.01.T01:five_prime_UTR | 20.0% |
!!! | TTTTTTTCCTAATGCTAAAA+TGG | - | Chr8:42026780-42026799 | MsG0880044436.01.T01:five_prime_UTR | 20.0% |
! | AAAAGATCAAAACTGTGAAA+AGG | - | Chr8:42025917-42025936 | MsG0880044436.01.T01:CDS | 25.0% |
! | AAAGATCAAAACTGTGAAAA+GGG | - | Chr8:42025918-42025937 | MsG0880044436.01.T01:CDS | 25.0% |
! | CTAAAAATGATAGCAAAATC+AGG | + | Chr8:42026622-42026641 | None:intergenic | 25.0% |
! | GTATGGTAAATGAAATTGAA+TGG | + | Chr8:42024995-42025014 | None:intergenic | 25.0% |
!!! | ACTAAATCCATTTTAGCATT+AGG | + | Chr8:42026790-42026809 | None:intergenic | 25.0% |
!!! | ATAGTTTTCAAGTACAAGAA+GGG | - | Chr8:42025762-42025781 | MsG0880044436.01.T01:CDS | 25.0% |
!!! | TATAGTTTTCAAGTACAAGA+AGG | - | Chr8:42025761-42025780 | MsG0880044436.01.T01:CDS | 25.0% |
!!! | TTAGTGTTGATTTTGTTGTT+TGG | - | Chr8:42025513-42025532 | MsG0880044436.01.T01:intron | 25.0% |
ATTGAAACTGATCAAAACCA+TGG | + | Chr8:42025342-42025361 | None:intergenic | 30.0% | |
CAATGATACACAGATATCAT+AGG | + | Chr8:42026724-42026743 | None:intergenic | 30.0% | |
CATCTTCGAATTTCTTGATT+GGG | + | Chr8:42025845-42025864 | None:intergenic | 30.0% | |
GTGAAGGATATTGAATTGAA+TGG | + | Chr8:42025073-42025092 | None:intergenic | 30.0% | |
TTTCCACTGATGAAATAGAA+TGG | + | Chr8:42025900-42025919 | None:intergenic | 30.0% | |
! | TTGAGTTACTGAGACATTTT+GGG | - | Chr8:42026515-42026534 | MsG0880044436.01.T01:CDS | 30.0% |
!! | TTTGAGTTACTGAGACATTT+TGG | - | Chr8:42026514-42026533 | MsG0880044436.01.T01:CDS | 30.0% |
ACTGGTTGTAATTCTCAGAA+GGG | + | Chr8:42025210-42025229 | None:intergenic | 35.0% | |
CCAATCAAGAAATTCGAAGA+TGG | - | Chr8:42025843-42025862 | MsG0880044436.01.T01:CDS | 35.0% | |
CCATCTTCGAATTTCTTGAT+TGG | + | Chr8:42025846-42025865 | None:intergenic | 35.0% | |
CTATGTAACATACATCTCCA+TGG | - | Chr8:42025322-42025341 | MsG0880044436.01.T01:CDS | 35.0% | |
TCGTGGAGTTATAACAACAA+GGG | + | Chr8:42025955-42025974 | None:intergenic | 35.0% | |
TTCCAAATCAGTGACACTTT+AGG | - | Chr8:42025247-42025266 | MsG0880044436.01.T01:CDS | 35.0% | |
TTCGTGGAGTTATAACAACA+AGG | + | Chr8:42025956-42025975 | None:intergenic | 35.0% | |
! | ATCCTTCACACATTTTGCTA+TGG | - | Chr8:42025084-42025103 | MsG0880044436.01.T02:three_prime_UTR | 35.0% |
! | TACCTAAAGTGTCACTGATT+TGG | + | Chr8:42025252-42025271 | None:intergenic | 35.0% |
! | TTCTGAGAATTACAACCAGT+GGG | - | Chr8:42025210-42025229 | MsG0880044436.01.T01:CDS | 35.0% |
AAATCATCTCCTTCACCAAG+TGG | - | Chr8:42025984-42026003 | MsG0880044436.01.T01:intron | 40.0% | |
ATCTAATTCAACTGCACCAC+CGG | - | Chr8:42026418-42026437 | MsG0880044436.01.T01:intron | 40.0% | |
CAAGCCTTCAAGTATTTCGT+TGG | - | Chr8:42025160-42025179 | MsG0880044436.01.T02:three_prime_UTR | 40.0% | |
CTCCATAGCAAAATGTGTGA+AGG | + | Chr8:42025089-42025108 | None:intergenic | 40.0% | |
GTACTATGTGACGTGTTGTA+TGG | + | Chr8:42025012-42025031 | None:intergenic | 40.0% | |
GTGAAGAGAACAAAGAAGAG+AGG | + | Chr8:42025121-42025140 | None:intergenic | 40.0% | |
TCCACCAACGAAATACTTGA+AGG | + | Chr8:42025167-42025186 | None:intergenic | 40.0% | |
TGGTGATACAGAGTTCACTT+TGG | - | Chr8:42025863-42025882 | MsG0880044436.01.T01:CDS | 40.0% | |
! | ACTCAAAAACAGAGCACCAA+CGG | + | Chr8:42026501-42026520 | None:intergenic | 40.0% |
! | CAAGTATTTCGTTGGTGGAA+AGG | - | Chr8:42025168-42025187 | MsG0880044436.01.T02:exon | 40.0% |
! | CACTGGTTGTAATTCTCAGA+AGG | + | Chr8:42025211-42025230 | None:intergenic | 40.0% |
! | CTTCTGAGAATTACAACCAG+TGG | - | Chr8:42025209-42025228 | MsG0880044436.01.T01:CDS | 40.0% |
! | CTTGGTGAAGGAGATGATTT+TGG | + | Chr8:42025984-42026003 | None:intergenic | 40.0% |
! | TATTTCGTTGGTGGAAAGGA+TGG | - | Chr8:42025172-42025191 | MsG0880044436.01.T02:exon | 40.0% |
ACAAATGAACCACTGCTACC+CGG | + | Chr8:42026440-42026459 | None:intergenic | 45.0% | |
AGTTCACTTTGGACAGAGCA+GGG | - | Chr8:42025874-42025893 | MsG0880044436.01.T01:CDS | 45.0% | |
GAATACACCAGAAAGCTCGA+AGG | + | Chr8:42026467-42026486 | None:intergenic | 45.0% | |
GCCTTCAAGTATTTCGTTGG+TGG | - | Chr8:42025163-42025182 | MsG0880044436.01.T02:three_prime_UTR | 45.0% | |
GGGCCATTCTATTTCATCAG+TGG | - | Chr8:42025894-42025913 | MsG0880044436.01.T01:CDS | 45.0% | |
GGTGCAGTTGAATTAGATCC+TGG | + | Chr8:42026416-42026435 | None:intergenic | 45.0% | |
GTACAAGAAGGGTTCAGACT+CGG | - | Chr8:42025773-42025792 | MsG0880044436.01.T01:CDS | 45.0% | |
TCTAATTCAACTGCACCACC+GGG | - | Chr8:42026419-42026438 | MsG0880044436.01.T01:intron | 45.0% | |
! | GGTGAAGGAGATGATTTTGG+TGG | + | Chr8:42025981-42026000 | None:intergenic | 45.0% |
!!! | GATGATTTTGGTGGTGTTCG+TGG | + | Chr8:42025972-42025991 | None:intergenic | 45.0% |
!! | AAATTAAAATAATAATAAAG+TGG | + | Chr8:42025288-42025307 | None:intergenic | 5.0% |
!! | AATTAAAATAATAATAAAGT+GGG | + | Chr8:42025287-42025306 | None:intergenic | 5.0% |
CTCACTACTGGAGATGGAGA+TGG | + | Chr8:42026134-42026153 | None:intergenic | 50.0% | |
GAGAATTACAACCAGTGGGC+TGG | - | Chr8:42025214-42025233 | MsG0880044436.01.T01:CDS | 50.0% | |
GAGTTCACTTTGGACAGAGC+AGG | - | Chr8:42025873-42025892 | MsG0880044436.01.T01:CDS | 50.0% | |
GGAGATGGAGATGATGCCAT+AGG | + | Chr8:42026176-42026195 | None:intergenic | 50.0% | |
TACGGCTTCATCTCCTTCTC+CGG | - | Chr8:42026232-42026251 | MsG0880044436.01.T01:intron | 50.0% | |
TATTCCGTAACCCTTGCCGT+TGG | - | Chr8:42026482-42026501 | MsG0880044436.01.T01:CDS | 50.0% | |
TCATCTCCTTCACCAAGTGG+TGG | - | Chr8:42025987-42026006 | MsG0880044436.01.T01:intron | 50.0% | |
TGTAGCTCCTTCGAGCTTTC+TGG | - | Chr8:42026457-42026476 | MsG0880044436.01.T01:CDS | 50.0% | |
TGTTTCACCACCATCTCCAG+TGG | - | Chr8:42026061-42026080 | MsG0880044436.01.T01:intron | 50.0% | |
! | AAAACAGAGCACCAACGGCA+AGG | + | Chr8:42026496-42026515 | None:intergenic | 50.0% |
! | AAACAGAGCACCAACGGCAA+GGG | + | Chr8:42026495-42026514 | None:intergenic | 50.0% |
! | GGAGATGGTGGTGAAACAGA+GGG | + | Chr8:42026059-42026078 | None:intergenic | 50.0% |
! | TCGTTGGTGGAAAGGATGGA+TGG | - | Chr8:42025176-42025195 | MsG0880044436.01.T02:exon | 50.0% |
! | TGGAGATGGTGGTGAAACAG+AGG | + | Chr8:42026060-42026079 | None:intergenic | 50.0% |
!! | ATTACAACCAGTGGGCTGGA+AGG | - | Chr8:42025218-42025237 | MsG0880044436.01.T01:CDS | 50.0% |
!! | TGAAACAGAGGGTGATGGAG+TGG | + | Chr8:42026048-42026067 | None:intergenic | 50.0% |
AATGAACCACTGCTACCCGG+TGG | + | Chr8:42026437-42026456 | None:intergenic | 55.0% | |
AGATGAAGCCGTAGGTCCAC+CGG | + | Chr8:42026225-42026244 | None:intergenic | 55.0% | |
AGCACCAACGGCAAGGGTTA+CGG | + | Chr8:42026489-42026508 | None:intergenic | 55.0% | |
GGAGAAGGAGATGAAGCCGT+AGG | + | Chr8:42026233-42026252 | None:intergenic | 55.0% | |
GGAGATGGAGATGATGCCGT+AGG | + | Chr8:42026125-42026144 | None:intergenic | 55.0% | |
GGTGATAAGCCACCACCACT+TGG | + | Chr8:42026002-42026021 | None:intergenic | 55.0% | |
GGTGGTGAAACAGAGGGTGA+TGG | + | Chr8:42026053-42026072 | None:intergenic | 55.0% | |
GGTGTGCTCACTACTGGAGA+TGG | + | Chr8:42026140-42026159 | None:intergenic | 55.0% | |
TCCAGTAGTGAGCACACCTC+CGG | - | Chr8:42026142-42026161 | MsG0880044436.01.T01:intron | 55.0% | |
TCTCCTTCACCAAGTGGTGG+TGG | - | Chr8:42025990-42026009 | MsG0880044436.01.T01:intron | 55.0% | |
! | AAGCCACCACCACTTGGTGA+AGG | + | Chr8:42025996-42026015 | None:intergenic | 55.0% |
! | GGAGTGGTTGTCGTTGGTGA+CGG | + | Chr8:42026032-42026051 | None:intergenic | 55.0% |
!! | GAAGGGTTCAGACTCGGTGT+TGG | - | Chr8:42025779-42025798 | MsG0880044436.01.T01:CDS | 55.0% |
!! | GGTGATGGAGTGGTTGTCGT+TGG | + | Chr8:42026038-42026057 | None:intergenic | 55.0% |
!! | GTTGTCGTTGGTGACGGTGA+AGG | + | Chr8:42026026-42026045 | None:intergenic | 55.0% |
ACCTGTTCCTTCCAGCCCAC+TGG | + | Chr8:42025228-42025247 | None:intergenic | 60.0% | |
ATCTACCCCAGGTGGTCCTC+CGG | - | Chr8:42026292-42026311 | MsG0880044436.01.T01:intron | 60.0% | |
CTTGCTGGAGGAGTAGCCAC+TGG | + | Chr8:42026080-42026099 | None:intergenic | 60.0% | |
GATGCCATAGGTCCACCAGC+CGG | + | Chr8:42026164-42026183 | None:intergenic | 60.0% | |
GATGGACCACCTGCTGGTGA+AGG | + | Chr8:42026275-42026294 | None:intergenic | 60.0% | |
GCTTCATCTCCTTCTCCGGC+AGG | - | Chr8:42026236-42026255 | MsG0880044436.01.T01:intron | 60.0% | |
GGAGGAGTAGCCACTGGAGA+TGG | + | Chr8:42026074-42026093 | None:intergenic | 60.0% | |
GGAGTAGCCACTGGAGATGG+TGG | + | Chr8:42026071-42026090 | None:intergenic | 60.0% | |
GTAGTGAGCACACCTCCAGC+CGG | - | Chr8:42026203-42026222 | MsG0880044436.01.T01:intron | 60.0% | |
TAGGTCCACCTGCCGGAACA+GGG | + | Chr8:42026106-42026125 | None:intergenic | 60.0% | |
TCATCTCCTTCTCCGGCAGG+TGG | - | Chr8:42026239-42026258 | MsG0880044436.01.T01:intron | 60.0% | |
TCCAGCAAGCTCCCCTGTTC+CGG | - | Chr8:42026091-42026110 | MsG0880044436.01.T01:intron | 60.0% | |
TGTTCCGGCAGGTGGACCTA+CGG | - | Chr8:42026106-42026125 | MsG0880044436.01.T01:intron | 60.0% | |
TTAGATCCTGGTGACCCCGC+TGG | + | Chr8:42026404-42026423 | None:intergenic | 60.0% | |
! | GCTGGAGGTGTGCTCACTAC+TGG | + | Chr8:42026203-42026222 | None:intergenic | 60.0% |
!! | ACCAGTGGGCTGGAAGGAAC+AGG | - | Chr8:42025224-42025243 | MsG0880044436.01.T01:CDS | 60.0% |
!! | GTCGTTGGTGACGGTGAAGG+TGG | + | Chr8:42026023-42026042 | None:intergenic | 60.0% |
ACCTCCAGCCGGTGGACCTA+CGG | - | Chr8:42026214-42026233 | MsG0880044436.01.T01:intron | 65.0% | |
ACTGCACCACCGGGTAGCAG+TGG | - | Chr8:42026428-42026447 | MsG0880044436.01.T01:intron | 65.0% | |
AGGTCCACCTGCCGGAACAG+GGG | + | Chr8:42026105-42026124 | None:intergenic | 65.0% | |
ATCAGCTGCACCAGGACCCG+GGG | - | Chr8:42026367-42026386 | MsG0880044436.01.T01:intron | 65.0% | |
CCACCAGCTCCTTCACCAGC+AGG | - | Chr8:42026263-42026282 | MsG0880044436.01.T01:intron | 65.0% | |
CCACCTGCTGGTGAAGGAGC+TGG | + | Chr8:42026269-42026288 | None:intergenic | 65.0% | |
CCAGCTCCTTCACCAGCAGG+TGG | - | Chr8:42026266-42026285 | MsG0880044436.01.T01:intron | 65.0% | |
CCTGCTGGTGAAGGAGCTGG+TGG | + | Chr8:42026266-42026285 | None:intergenic | 65.0% | |
GATCAGCTGCACCAGGACCC+GGG | - | Chr8:42026366-42026385 | MsG0880044436.01.T01:intron | 65.0% | |
GATGCCGTAGGTCCACCTGC+CGG | + | Chr8:42026113-42026132 | None:intergenic | 65.0% | |
GCAGGTGGTCCATCTACCCC+AGG | - | Chr8:42026281-42026300 | MsG0880044436.01.T01:intron | 65.0% | |
GGAGGACCACCTGGGGTAGA+TGG | + | Chr8:42026293-42026312 | None:intergenic | 65.0% | |
GGATCAGCTGCACCAGGACC+CGG | - | Chr8:42026365-42026384 | MsG0880044436.01.T01:intron | 65.0% | |
GGGAGCAGCGACTCCATCAG+GGG | - | Chr8:42026328-42026347 | MsG0880044436.01.T01:intron | 65.0% | |
GGGGAGCAGCGACTCCATCA+GGG | - | Chr8:42026327-42026346 | MsG0880044436.01.T01:intron | 65.0% | |
GGGGTAGATGGACCACCTGC+TGG | + | Chr8:42026281-42026300 | None:intergenic | 65.0% | |
GGTGGTCCATCTACCCCAGG+TGG | - | Chr8:42026284-42026303 | MsG0880044436.01.T01:intron | 65.0% | |
GTAGGTCCACCTGCCGGAAC+AGG | + | Chr8:42026107-42026126 | None:intergenic | 65.0% | |
GTAGTGAGCACACCTCCGGC+TGG | - | Chr8:42026146-42026165 | MsG0880044436.01.T01:intron | 65.0% | |
TCCTGGTGCAGCTGATCCCC+CGG | + | Chr8:42026363-42026382 | None:intergenic | 65.0% | |
TGATGGAGTCGCTGCTCCCC+CGG | + | Chr8:42026327-42026346 | None:intergenic | 65.0% | |
! | ACCTCCGGCTGGTGGACCTA+TGG | - | Chr8:42026157-42026176 | MsG0880044436.01.T01:intron | 65.0% |
! | GCCGGAGGTGTGCTCACTAC+TGG | + | Chr8:42026146-42026165 | None:intergenic | 65.0% |
!! | GGAACAGGGGAGCTTGCTGG+AGG | + | Chr8:42026092-42026111 | None:intergenic | 65.0% |
AGCTCCCCTGTTCCGGCAGG+TGG | - | Chr8:42026098-42026117 | MsG0880044436.01.T01:intron | 70.0% | |
CCTGGTGCAGCTGATCCCCC+GGG | + | Chr8:42026362-42026381 | None:intergenic | 70.0% | |
GAAGCCGTAGGTCCACCGGC+TGG | + | Chr8:42026221-42026240 | None:intergenic | 70.0% | |
GATGGAGTCGCTGCTCCCCC+GGG | + | Chr8:42026326-42026345 | None:intergenic | 70.0% | |
GCAAGCTCCCCTGTTCCGGC+AGG | - | Chr8:42026095-42026114 | MsG0880044436.01.T01:intron | 70.0% | |
GCCATAGGTCCACCAGCCGG+AGG | + | Chr8:42026161-42026180 | None:intergenic | 70.0% | |
GCCGGAACAGGGGAGCTTGC+TGG | + | Chr8:42026095-42026114 | None:intergenic | 70.0% | |
GGAGCTGGTGGTCCACCTGC+CGG | + | Chr8:42026254-42026273 | None:intergenic | 70.0% | |
GGGGGAGCAGCGACTCCATC+AGG | - | Chr8:42026326-42026345 | MsG0880044436.01.T01:intron | 70.0% | |
GGTGGTCCACCTGCCGGAGA+AGG | + | Chr8:42026248-42026267 | None:intergenic | 70.0% | |
GTGAGCACACCTCCAGCCGG+TGG | - | Chr8:42026206-42026225 | MsG0880044436.01.T01:intron | 70.0% | |
GTGAGCACACCTCCGGCTGG+TGG | - | Chr8:42026149-42026168 | MsG0880044436.01.T01:intron | 70.0% | |
TCAGCTGCACCAGGACCCGG+GGG | - | Chr8:42026368-42026387 | MsG0880044436.01.T01:intron | 70.0% | |
! | CTGGTGCCGGAGGACCACCT+GGG | + | Chr8:42026301-42026320 | None:intergenic | 70.0% |
! | TGGTGCCGGAGGACCACCTG+GGG | + | Chr8:42026300-42026319 | None:intergenic | 70.0% |
!! | ATCAGGGGCACCAGGACCCG+GGG | - | Chr8:42026343-42026362 | MsG0880044436.01.T01:intron | 70.0% |
!! | CATCAGGGGCACCAGGACCC+GGG | - | Chr8:42026342-42026361 | MsG0880044436.01.T01:intron | 70.0% |
!! | CCATCAGGGGCACCAGGACC+CGG | - | Chr8:42026341-42026360 | MsG0880044436.01.T01:intron | 70.0% |
!! | GCGACTCCATCAGGGGCACC+AGG | - | Chr8:42026335-42026354 | MsG0880044436.01.T01:intron | 70.0% |
CCAGGTGGTCCTCCGGCACC+AGG | - | Chr8:42026299-42026318 | MsG0880044436.01.T01:intron | 75.0% | |
CCCGGGGGATCAGCTGCACC+AGG | - | Chr8:42026359-42026378 | MsG0880044436.01.T01:intron | 75.0% | |
CCGGGTCCTGGTGCCCCTGA+TGG | + | Chr8:42026344-42026363 | None:intergenic | 75.0% | |
CGCTGGAGCTGCTGCTCCCC+CGG | + | Chr8:42026387-42026406 | None:intergenic | 75.0% | |
CGGGGGAGCAGCAGCTCCAG+CGG | - | Chr8:42026385-42026404 | MsG0880044436.01.T01:intron | 75.0% | |
GCAGCTCCAGCGGGGTCACC+AGG | - | Chr8:42026395-42026414 | MsG0880044436.01.T01:intron | 75.0% | |
GCAGCTGATCCCCCGGGTCC+TGG | + | Chr8:42026356-42026375 | None:intergenic | 75.0% | |
GCTGGAGCTGCTGCTCCCCC+GGG | + | Chr8:42026386-42026405 | None:intergenic | 75.0% | |
GGGGAGCAGCAGCTCCAGCG+GGG | - | Chr8:42026387-42026406 | MsG0880044436.01.T01:intron | 75.0% | |
GGGGGAGCAGCAGCTCCAGC+GGG | - | Chr8:42026386-42026405 | MsG0880044436.01.T01:intron | 75.0% | |
GGTCCTCCGGCACCAGGACC+CGG | - | Chr8:42026305-42026324 | MsG0880044436.01.T01:intron | 75.0% | |
GTCCTCCGGCACCAGGACCC+GGG | - | Chr8:42026306-42026325 | MsG0880044436.01.T01:intron | 75.0% | |
TCCTCCGGCACCAGGACCCG+GGG | - | Chr8:42026307-42026326 | MsG0880044436.01.T01:intron | 75.0% | |
! | CCTGGTGCCGGAGGACCACC+TGG | + | Chr8:42026302-42026321 | None:intergenic | 75.0% |
! | GCCGTAGGTCCACCGGCTGG+AGG | + | Chr8:42026218-42026237 | None:intergenic | 75.0% |
!! | TCAGGGGCACCAGGACCCGG+GGG | - | Chr8:42026344-42026363 | MsG0880044436.01.T01:intron | 75.0% |
! | CCTCCGGCACCAGGACCCGG+GGG | - | Chr8:42026308-42026327 | MsG0880044436.01.T01:intron | 80.0% |
! | GCTCCCCCGGGTCCTGGTGC+CGG | + | Chr8:42026314-42026333 | None:intergenic | 80.0% |
! | GCTGCTGCTCCCCCGGGTCC+TGG | + | Chr8:42026380-42026399 | None:intergenic | 80.0% |
! | GTCGCTGCTCCCCCGGGTCC+TGG | + | Chr8:42026320-42026339 | None:intergenic | 80.0% |
!! | CCCCCGGGTCCTGGTGCCGG+AGG | + | Chr8:42026311-42026330 | None:intergenic | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 42024899 | 42026810 | 42024899 | ID=MsG0880044436.01;Name=MsG0880044436.01 |
Chr8 | mRNA | 42025183 | 42026810 | 42025183 | ID=MsG0880044436.01.T01;Parent=MsG0880044436.01;Name=MsG0880044436.01.T01;_AED=0.49;_eAED=0.49;_QI=204|0.5|0.33|1|0|0|3|0|242 |
Chr8 | exon | 42025183 | 42025505 | 42025183 | ID=MsG0880044436.01.T01:exon:17143;Parent=MsG0880044436.01.T01 |
Chr8 | exon | 42025704 | 42025943 | 42025704 | ID=MsG0880044436.01.T01:exon:17142;Parent=MsG0880044436.01.T01 |
Chr8 | five_prime_UTR | 42026607 | 42026810 | 42026607 | ID=MsG0880044436.01.T01:five_prime_utr;Parent=MsG0880044436.01.T01 |
Chr8 | CDS | 42026441 | 42026606 | 42026441 | ID=MsG0880044436.01.T01:cds;Parent=MsG0880044436.01.T01 |
Chr8 | CDS | 42025704 | 42025943 | 42025704 | ID=MsG0880044436.01.T01:cds;Parent=MsG0880044436.01.T01 |
Chr8 | CDS | 42025183 | 42025505 | 42025183 | ID=MsG0880044436.01.T01:cds;Parent=MsG0880044436.01.T01 |
Chr8 | mRNA | 42024899 | 42026810 | 42024899 | ID=MsG0880044436.01.T02;Parent=MsG0880044436.01;Name=MsG0880044436.01.T02;_AED=0.49;_eAED=0.49;_QI=204|1|1|1|0|0|2|284|308 |
Chr8 | exon | 42024899 | 42025943 | 42024899 | ID=MsG0880044436.01.T02:exon:17144;Parent=MsG0880044436.01.T02 |
Chr8 | five_prime_UTR | 42026607 | 42026810 | 42026607 | ID=MsG0880044436.01.T02:five_prime_utr;Parent=MsG0880044436.01.T02 |
Chr8 | CDS | 42026441 | 42026606 | 42026441 | ID=MsG0880044436.01.T02:cds;Parent=MsG0880044436.01.T02 |
Chr8 | CDS | 42025183 | 42025943 | 42025183 | ID=MsG0880044436.01.T02:cds;Parent=MsG0880044436.01.T02 |
Chr8 | three_prime_UTR | 42024899 | 42025182 | 42024899 | ID=MsG0880044436.01.T02:three_prime_utr;Parent=MsG0880044436.01.T02 |
Chr8 | mRNA | 42025183 | 42026073 | 42025183 | ID=MsG0880044436.01.T03;Parent=MsG0880044436.01;Name=MsG0880044436.01.T03;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|0|1|0|296 |
Chr8 | exon | 42025183 | 42026073 | 42025183 | ID=MsG0880044436.01.T03:exon:17145;Parent=MsG0880044436.01.T03 |
Chr8 | CDS | 42025183 | 42026073 | 42025183 | ID=MsG0880044436.01.T03:cds;Parent=MsG0880044436.01.T03 |
Chr8 | mRNA | 42025758 | 42025889 | 42025758 | ID=MsG0880044436.01.T04;Parent=MsG0880044436.01;Name=MsG0880044436.01.T04;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|0|1|0|43 |
Chr8 | exon | 42025758 | 42025889 | 42025758 | ID=MsG0880044436.01.T04:exon:17146;Parent=MsG0880044436.01.T04 |
Chr8 | CDS | 42025758 | 42025889 | 42025758 | ID=MsG0880044436.01.T04:cds;Parent=MsG0880044436.01.T04 |
Gene Sequence |
Protein sequence |