AlfalfaGEDB | MsG0480023757.01

M. sativa cultivar ZhongmuNo.1 / MsG0480023757.01

KEGG: K01489
GO: GO:0003824 GO:0004126 GO:0008270 GO:0009972
PFAM: PF00383 PF08211

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023757.01.T01	XP_003630631.1	93.141	277	13	1	1	277	16	286	0	524

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023757.01.T01	O65896	57.045	291	101	5	2	277	17	298	2.39E-108	318

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023757.01.T01	G7LJJ4	93.141	277	13	1	1	277	16	286	0.0	524

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180003257.01	MsG0480023757.01	-0.800255	1.570469e-48	7.278596e-46
MsG0480023757.01	MsG0780038645.01	-0.809437	1.893469e-50	1.111664e-47
MsG0480023757.01	MsG0880045555.01	0.812033	5.195733e-51	3.267369e-48
MsG0480023757.01	MsG0880047360.01	0.800973	1.120889e-48	5.290779e-46

PPI

Gene1	Gene2	Type
MsG0480023727.01	MsG0480023757.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023757.01.T01	MTR_8g101570	93.141	277	13	1	1	277	16	286	0.0	524
MsG0480023757.01.T01	MTR_6g092660	59.298	285	102	4	1	278	16	293	3.40e-114	331

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023757.01.T01	AT2G19570	57.045	291	101	5	2	277	17	298	2.44e-109	318
MsG0480023757.01.T01	AT4G29600	49.828	291	127	6	2	280	16	299	4.17e-89	267
MsG0480023757.01.T01	AT4G29610	50.365	274	120	5	13	277	21	287	6.64e-89	266
MsG0480023757.01.T01	AT4G29620	47.122	278	124	6	13	280	48	312	4.85e-77	238
MsG0480023757.01.T01	AT4G29640	43.206	287	147	7	1	277	13	293	1.17e-64	206
MsG0480023757.01.T01	AT4G29630	50.000	216	91	4	2	207	15	223	4.82e-61	193
MsG0480023757.01.T01	AT4G29570	42.446	278	141	7	11	277	23	292	3.97e-58	188
MsG0480023757.01.T01	AT4G29650	39.326	267	114	6	13	277	25	245	1.26e-48	162
MsG0480023757.01.T01	AT4G29580	40.892	269	137	9	12	267	27	286	2.59e-48	162
MsG0480023757.01.T01	AT4G29580	40.892	269	137	9	12	267	27	286	3.31e-47	164

Find 108 sgRNAs with CRISPR-Local

Find 113 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGAGACAGAGAAGTGAAATT+TGG	0.221554	4:+89479805	None:intergenic
GACAGCTCCGACGTGGAAAT+TGG	0.275635	4:+89480062	None:intergenic
CGGGTGCTCCGCGGATTTCT+TGG	0.278140	4:+89479860	None:intergenic
TCCTAGTTTGGGTCCTCTTC+AGG	0.279807	4:-89479500	MsG0480023757.01.T01:CDS
TGGGTGGTCGGGCGAGGGAT+TGG	0.308461	4:+89480088	None:intergenic
AAAGTCTGCAATTGACATTT+AGG	0.308869	4:+89479346	None:intergenic
GGTAATGATGATTTGAATAT+CGG	0.323221	4:+89479840	None:intergenic
GGGTGGTCGGGCGAGGGATT+GGG	0.334841	4:+89480089	None:intergenic
GGCGGCGTTTAATCCTAGTT+TGG	0.341522	4:-89479512	MsG0480023757.01.T01:CDS
CCAGATGGTGAATTACTATA+AGG	0.358174	4:+89479589	None:intergenic
GAGAGTGAGGGATGAAGATT+TGG	0.361013	4:+89480143	None:intergenic
TCCTCTTCAGGCTGCGGTGG+TGG	0.366749	4:-89479488	MsG0480023757.01.T01:CDS
GCGGCGTTTAATCCTAGTTT+GGG	0.380242	4:-89479511	MsG0480023757.01.T01:CDS
CCTTATAGTAATTCACCATC+TGG	0.384670	4:-89479589	MsG0480023757.01.T01:CDS
GAGACAGAGAAGTGAAATTT+GGG	0.388256	4:+89479806	None:intergenic
GGATTTCTTGGAAGAATTGC+CGG	0.395040	4:+89479872	None:intergenic
GAATTGCCGGCAGTGGCCAC+AGG	0.404218	4:+89479885	None:intergenic
CCGGCAGTGGCCACAGGGAG+CGG	0.421277	4:+89479891	None:intergenic
GCGTTTATTGTCGCCGGCGG+CGG	0.423175	4:-89479466	MsG0480023757.01.T01:CDS
GATAGTTTCTCTGTTGTTAA+CGG	0.423842	4:+89479691	None:intergenic
GACGGCAAATGAGTGGAGAT+TGG	0.429471	4:+89479918	None:intergenic
TGACAAGTGATGGGAGGAGT+TGG	0.430025	4:+89480118	None:intergenic
GGAGGAGTTGGGTGAGAGTG+AGG	0.430382	4:+89480130	None:intergenic
CCATCGGGTCGGATCTTAAT+CGG	0.432605	4:-89480030	MsG0480023757.01.T01:CDS
TGGAGATGGGTGGTCGGGCG+AGG	0.432898	4:+89480082	None:intergenic
TCGGGCGAGGGATTGGGCGG+AGG	0.439797	4:+89480095	None:intergenic
AGTGAAATTTGGGTCAGATT+CGG	0.443529	4:+89479816	None:intergenic
GAAGCTAAAGATTGCGGCTA+TGG	0.452033	4:-89479635	MsG0480023757.01.T01:CDS
GAAATTGGAGATGGGTGGTC+GGG	0.455841	4:+89480077	None:intergenic
CCGCTCCCTGTGGCCACTGC+CGG	0.461973	4:-89479891	MsG0480023757.01.T01:CDS
AGTGATGAAGAGGGAGGCCT+GGG	0.468579	4:+89479992	None:intergenic
TAAAGGATCTTATGTTGAAT+CGG	0.470270	4:-89479533	MsG0480023757.01.T01:CDS
CTTGGAAGAATTGCCGGCAG+TGG	0.473200	4:+89479878	None:intergenic
TGGGCGGAGGTGACAAGTGA+TGG	0.473273	4:+89480108	None:intergenic
GACAAGTGATGGGAGGAGTT+GGG	0.474173	4:+89480119	None:intergenic
GAGAAACTGTTCGGCGTGGA+TGG	0.474486	4:+89479969	None:intergenic
ACGGCAAATGAGTGGAGATT+GGG	0.480319	4:+89479919	None:intergenic
GAGTGATGAAGAGGGAGGCC+TGG	0.482748	4:+89479991	None:intergenic
ATCACCGTTGCAAACGCCAT+TGG	0.486585	4:+89479669	None:intergenic
ACCATCTGGGATGGCGATTG+TGG	0.487559	4:-89479575	MsG0480023757.01.T01:CDS
GCCACAGGGAGCGGCGGAGA+CGG	0.489161	4:+89479900	None:intergenic
AATTTCCACGTCGGAGCTGT+CGG	0.496820	4:-89480060	MsG0480023757.01.T01:CDS
AAAACAGAGGAGCGTGTTGA+GGG	0.498221	4:+89479746	None:intergenic
CCGATTAAGATCCGACCCGA+TGG	0.499542	4:+89480030	None:intergenic
CGGAAGAAGCTTTAACCCGT+TGG	0.502023	4:+89479711	None:intergenic
GCCACCACCGCAGCCTGAAG+AGG	0.504864	4:+89479487	None:intergenic
GGGTCCTCTTCAGGCTGCGG+TGG	0.509491	4:-89479491	MsG0480023757.01.T01:CDS
TGGTCGGGCGAGGGATTGGG+CGG	0.511129	4:+89480092	None:intergenic
GTAATGATGATTTGAATATC+GGG	0.511400	4:+89479841	None:intergenic
CGATTAAGATCCGACCCGAT+GGG	0.512765	4:+89480031	None:intergenic
GGAGATGGGTGGTCGGGCGA+GGG	0.514417	4:+89480083	None:intergenic
ATTTGTGAGGAGAAACTGTT+CGG	0.519896	4:+89479960	None:intergenic
GGAAATTGGAGATGGGTGGT+CGG	0.522634	4:+89480076	None:intergenic
GTGGTGGCGTTTATTGTCGC+CGG	0.545550	4:-89479472	MsG0480023757.01.T01:CDS
TTTGGGTCCTCTTCAGGCTG+CGG	0.545667	4:-89479494	MsG0480023757.01.T01:CDS
TCCGACGTGGAAATTGGAGA+TGG	0.546314	4:+89480068	None:intergenic
TCGTGTGGTCCAAATCTGTA+AGG	0.546455	4:+89479775	None:intergenic
GAGGGATGAAGATTTGGCCA+TGG	0.547112	4:+89480149	None:intergenic
GAGGAGTTGGGTGAGAGTGA+GGG	0.549562	4:+89480131	None:intergenic
GGCCATTGATCATTCATCAA+AGG	0.550701	4:+89479315	None:intergenic
GAGATTGGGTTCGTCGTGGA+GGG	0.551352	4:+89479933	None:intergenic
GGGCGGAGGTGACAAGTGAT+GGG	0.554215	4:+89480109	None:intergenic
TGAGATCGTGGGTGCTGTGT+TGG	0.554657	4:-89479434	MsG0480023757.01.T01:CDS
AGCTGTCGGATTATCCCCAT+CGG	0.556466	4:-89480046	MsG0480023757.01.T01:CDS
GCTAAAGATTGCGGCTATGG+AGG	0.558173	4:-89479632	MsG0480023757.01.T01:CDS
ATGGCGATTGTGGATTGTAA+TGG	0.559387	4:-89479565	MsG0480023757.01.T01:CDS
GATCGTGGGTGCTGTGTTGG+TGG	0.562554	4:-89479431	MsG0480023757.01.T01:CDS
AGCTTTAACCCGTTGGTGCG+TGG	0.562632	4:+89479718	None:intergenic
GGAGTCAATGTCGAATTCCC+AGG	0.562922	4:-89480009	MsG0480023757.01.T01:CDS
GGAGATTGGGTTCGTCGTGG+AGG	0.563710	4:+89479932	None:intergenic
CGGCGGAGACGGCAAATGAG+TGG	0.568502	4:+89479911	None:intergenic
CGGTAAGTATGATGAGATCG+TGG	0.575614	4:-89479446	MsG0480023757.01.T01:CDS
CTTATAGTAATTCACCATCT+GGG	0.578783	4:-89479588	MsG0480023757.01.T01:CDS
CGTGGATGGAGTGATGAAGA+GGG	0.588357	4:+89479983	None:intergenic
CTATCCAATGGCGTTTGCAA+CGG	0.589084	4:-89479673	MsG0480023757.01.T01:CDS
GCCTGAAGAGGACCCAAACT+AGG	0.589128	4:+89479499	None:intergenic
CTCATCATACTTACCGCCGC+CGG	0.591519	4:+89479453	None:intergenic
CCGACGTGGAAATTGGAGAT+GGG	0.591562	4:+89480069	None:intergenic
GAAATTTGGGTCAGATTCGG+AGG	0.592488	4:+89479819	None:intergenic
TAGTAATTCACCATCTGGGA+TGG	0.593503	4:-89479584	MsG0480023757.01.T01:CDS
GCCGTCTCCGCCGCTCCCTG+TGG	0.593913	4:-89479901	MsG0480023757.01.T01:CDS
GCGTGGATGGAGTGATGAAG+AGG	0.599358	4:+89479982	None:intergenic
GCTGTCGGATTATCCCCATC+GGG	0.602496	4:-89480045	MsG0480023757.01.T01:CDS
GCAGTGGCCACAGGGAGCGG+CGG	0.603868	4:+89479894	None:intergenic
AATTGCCGGCAGTGGCCACA+GGG	0.607932	4:+89479886	None:intergenic
CGGAGGTGACAAGTGATGGG+AGG	0.610703	4:+89480112	None:intergenic
TCCACAATCGCCATCCCAGA+TGG	0.613085	4:+89479574	None:intergenic
CGGAGCTATGGTGAAACAAG+AGG	0.615878	4:-89479401	MsG0480023757.01.T01:CDS
GGTAAGTATGATGAGATCGT+GGG	0.617309	4:-89479445	MsG0480023757.01.T01:CDS
GATTAAGATCCGACCCGATG+GGG	0.619338	4:+89480032	None:intergenic
GGTGGAGAAAGACGGAGCTA+TGG	0.623714	4:-89479413	MsG0480023757.01.T01:CDS
TCGGATTATCCCCATCGGGT+CGG	0.633245	4:-89480041	MsG0480023757.01.T01:CDS
GTGGCGTTTATTGTCGCCGG+CGG	0.634221	4:-89479469	MsG0480023757.01.T01:CDS
GGAGCTATGGTGAAACAAGA+GGG	0.637476	4:-89479400	MsG0480023757.01.T01:CDS
TCATGAGAAGCTAAAGATTG+CGG	0.637485	4:-89479641	MsG0480023757.01.T01:CDS
TTTGAATATCGGGTGCTCCG+CGG	0.650008	4:+89479851	None:intergenic
AGTGGAGATTGGGTTCGTCG+TGG	0.655961	4:+89479929	None:intergenic
ACGTGGAAATTGGAGATGGG+TGG	0.657179	4:+89480072	None:intergenic
ACAACAGAGAAACTATCCAA+TGG	0.665950	4:-89479685	MsG0480023757.01.T01:CDS
AGGATCTTATGTTGAATCGG+CGG	0.667327	4:-89479530	MsG0480023757.01.T01:CDS
CAATTCTTCCAAGAAATCCG+CGG	0.668096	4:-89479868	MsG0480023757.01.T01:CDS
ATAATCCGACAGCTCCGACG+TGG	0.676269	4:+89480055	None:intergenic
CCCATCTCCAATTTCCACGT+CGG	0.677245	4:-89480069	MsG0480023757.01.T01:CDS
GCTGTGTTGGTGGAGAAAGA+CGG	0.682938	4:-89479421	MsG0480023757.01.T01:CDS
TGAGGAGAAACTGTTCGGCG+TGG	0.685610	4:+89479965	None:intergenic
CGTGGAGGGAGAGATTTGTG+AGG	0.692173	4:+89479947	None:intergenic
GGATGGAGTGATGAAGAGGG+AGG	0.695700	4:+89479986	None:intergenic
TGTTGAGGGAGAAGATCGTG+TGG	0.703420	4:+89479760	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TGTAATGGAAAAATCTATAA+AGG	-	Chr4:89479921-89479940	MsG0480023757.01.T01:CDS	20.0%
!	GGTAATGATGATTTGAATAT+CGG	+	Chr4:89479634-89479653	None:intergenic	25.0%
!	GTAATGATGATTTGAATATC+GGG	+	Chr4:89479633-89479652	None:intergenic	25.0%
!	TAAAGGATCTTATGTTGAAT+CGG	-	Chr4:89479938-89479957	MsG0480023757.01.T01:CDS	25.0%
	AAAGTCTGCAATTGACATTT+AGG	+	Chr4:89480128-89480147	None:intergenic	30.0%
	CTTATAGTAATTCACCATCT+GGG	-	Chr4:89479883-89479902	MsG0480023757.01.T01:CDS	30.0%
	GATAGTTTCTCTGTTGTTAA+CGG	+	Chr4:89479783-89479802	None:intergenic	30.0%
!	CATTTTCTTCCTTACAGATT+TGG	-	Chr4:89479687-89479706	MsG0480023757.01.T01:CDS	30.0%
	ACAACAGAGAAACTATCCAA+TGG	-	Chr4:89479786-89479805	MsG0480023757.01.T01:CDS	35.0%
	AGTGAAATTTGGGTCAGATT+CGG	+	Chr4:89479658-89479677	None:intergenic	35.0%
	ATTTGTGAGGAGAAACTGTT+CGG	+	Chr4:89479514-89479533	None:intergenic	35.0%
	CCAGATGGTGAATTACTATA+AGG	+	Chr4:89479885-89479904	None:intergenic	35.0%
	CCTTATAGTAATTCACCATC+TGG	-	Chr4:89479882-89479901	MsG0480023757.01.T01:CDS	35.0%
	GAGACAGAGAAGTGAAATTT+GGG	+	Chr4:89479668-89479687	None:intergenic	35.0%
	TCATGAGAAGCTAAAGATTG+CGG	-	Chr4:89479830-89479849	MsG0480023757.01.T01:CDS	35.0%
	TGAGACAGAGAAGTGAAATT+TGG	+	Chr4:89479669-89479688	None:intergenic	35.0%
	AGGATCTTATGTTGAATCGG+CGG	-	Chr4:89479941-89479960	MsG0480023757.01.T01:CDS	40.0%
	CAATTCTTCCAAGAAATCCG+CGG	-	Chr4:89479603-89479622	MsG0480023757.01.T01:CDS	40.0%
	GGATTTCTTGGAAGAATTGC+CGG	+	Chr4:89479602-89479621	None:intergenic	40.0%
	GGTAAGTATGATGAGATCGT+GGG	-	Chr4:89480026-89480045	MsG0480023757.01.T01:CDS	40.0%
	TAGTAATTCACCATCTGGGA+TGG	-	Chr4:89479887-89479906	MsG0480023757.01.T01:CDS	40.0%
!	ATGGCGATTGTGGATTGTAA+TGG	-	Chr4:89479906-89479925	MsG0480023757.01.T01:CDS	40.0%
	ACGGCAAATGAGTGGAGATT+GGG	+	Chr4:89479555-89479574	None:intergenic	45.0%
	CGGTAAGTATGATGAGATCG+TGG	-	Chr4:89480025-89480044	MsG0480023757.01.T01:CDS	45.0%
	CTATCCAATGGCGTTTGCAA+CGG	-	Chr4:89479798-89479817	MsG0480023757.01.T01:CDS	45.0%
	GAAATTTGGGTCAGATTCGG+AGG	+	Chr4:89479655-89479674	None:intergenic	45.0%
	GAAGCTAAAGATTGCGGCTA+TGG	-	Chr4:89479836-89479855	MsG0480023757.01.T01:CDS	45.0%
	GAGAGTGAGGGATGAAGATT+TGG	+	Chr4:89479331-89479350	None:intergenic	45.0%
	GCGGCGTTTAATCCTAGTTT+GGG	-	Chr4:89479960-89479979	MsG0480023757.01.T01:CDS	45.0%
	GGAGCTATGGTGAAACAAGA+GGG	-	Chr4:89480071-89480090	MsG0480023757.01.T01:CDS	45.0%
	TCGTGTGGTCCAAATCTGTA+AGG	+	Chr4:89479699-89479718	None:intergenic	45.0%
!	AAAAACAGAGGAGCGTGTTG+AGG	+	Chr4:89479729-89479748	None:intergenic	45.0%
!	AAAACAGAGGAGCGTGTTGA+GGG	+	Chr4:89479728-89479747	None:intergenic	45.0%
!	TCAACACGCTCCTCTGTTTT+TGG	-	Chr4:89479728-89479747	MsG0480023757.01.T01:CDS	45.0%
!!!	TTTTTGGAACCACGCACCAA+CGG	-	Chr4:89479744-89479763	MsG0480023757.01.T01:CDS	45.0%
	AATTTCCACGTCGGAGCTGT+CGG	-	Chr4:89479411-89479430	MsG0480023757.01.T01:CDS	50.0%
	ACGTGGAAATTGGAGATGGG+TGG	+	Chr4:89479402-89479421	None:intergenic	50.0%
	AGCTGTCGGATTATCCCCAT+CGG	-	Chr4:89479425-89479444	MsG0480023757.01.T01:CDS	50.0%
	ATCACCGTTGCAAACGCCAT+TGG	+	Chr4:89479805-89479824	None:intergenic	50.0%
	CCATCGGGTCGGATCTTAAT+CGG	-	Chr4:89479441-89479460	MsG0480023757.01.T01:CDS	50.0%
	CCCATCTCCAATTTCCACGT+CGG	-	Chr4:89479402-89479421	MsG0480023757.01.T01:CDS	50.0%
	CCGACGTGGAAATTGGAGAT+GGG	+	Chr4:89479405-89479424	None:intergenic	50.0%
	CGATTAAGATCCGACCCGAT+GGG	+	Chr4:89479443-89479462	None:intergenic	50.0%
	CGGAGCTATGGTGAAACAAG+AGG	-	Chr4:89480070-89480089	MsG0480023757.01.T01:CDS	50.0%
	CGTGGATGGAGTGATGAAGA+GGG	+	Chr4:89479491-89479510	None:intergenic	50.0%
	GAAATTGGAGATGGGTGGTC+GGG	+	Chr4:89479397-89479416	None:intergenic	50.0%
	GACGGCAAATGAGTGGAGAT+TGG	+	Chr4:89479556-89479575	None:intergenic	50.0%
	GATTAAGATCCGACCCGATG+GGG	+	Chr4:89479442-89479461	None:intergenic	50.0%
	GCTAAAGATTGCGGCTATGG+AGG	-	Chr4:89479839-89479858	MsG0480023757.01.T01:CDS	50.0%
	GGAAATTGGAGATGGGTGGT+CGG	+	Chr4:89479398-89479417	None:intergenic	50.0%
	GGAGTCAATGTCGAATTCCC+AGG	-	Chr4:89479462-89479481	MsG0480023757.01.T01:CDS	50.0%
	GGCGGCGTTTAATCCTAGTT+TGG	-	Chr4:89479959-89479978	MsG0480023757.01.T01:CDS	50.0%
	GTGCGTGGTTCCAAAAACAG+AGG	+	Chr4:89479741-89479760	None:intergenic	50.0%
	TCCGACGTGGAAATTGGAGA+TGG	+	Chr4:89479406-89479425	None:intergenic	50.0%
	TCCTAGTTTGGGTCCTCTTC+AGG	-	Chr4:89479971-89479990	MsG0480023757.01.T01:CDS	50.0%
	TGTTGAGGGAGAAGATCGTG+TGG	+	Chr4:89479714-89479733	None:intergenic	50.0%
	TTTGAATATCGGGTGCTCCG+CGG	+	Chr4:89479623-89479642	None:intergenic	50.0%
!	CGGAAGAAGCTTTAACCCGT+TGG	+	Chr4:89479763-89479782	None:intergenic	50.0%
!	GACAAGTGATGGGAGGAGTT+GGG	+	Chr4:89479355-89479374	None:intergenic	50.0%
!	GCTGTGTTGGTGGAGAAAGA+CGG	-	Chr4:89480050-89480069	MsG0480023757.01.T01:CDS	50.0%
!	TGACAAGTGATGGGAGGAGT+TGG	+	Chr4:89479356-89479375	None:intergenic	50.0%
!!!	TTTTGGAACCACGCACCAAC+GGG	-	Chr4:89479745-89479764	MsG0480023757.01.T01:CDS	50.0%
	AGTGATGAAGAGGGAGGCCT+GGG	+	Chr4:89479482-89479501	None:intergenic	55.0%
	AGTGGAGATTGGGTTCGTCG+TGG	+	Chr4:89479545-89479564	None:intergenic	55.0%
	ATAATCCGACAGCTCCGACG+TGG	+	Chr4:89479419-89479438	None:intergenic	55.0%
	CCGATTAAGATCCGACCCGA+TGG	+	Chr4:89479444-89479463	None:intergenic	55.0%
	CGTGGAGGGAGAGATTTGTG+AGG	+	Chr4:89479527-89479546	None:intergenic	55.0%
	CTCATCATACTTACCGCCGC+CGG	+	Chr4:89480021-89480040	None:intergenic	55.0%
	CTTGGAAGAATTGCCGGCAG+TGG	+	Chr4:89479596-89479615	None:intergenic	55.0%
	GACAGCTCCGACGTGGAAAT+TGG	+	Chr4:89479412-89479431	None:intergenic	55.0%
	GAGAAACTGTTCGGCGTGGA+TGG	+	Chr4:89479505-89479524	None:intergenic	55.0%
	GAGATTGGGTTCGTCGTGGA+GGG	+	Chr4:89479541-89479560	None:intergenic	55.0%
	GAGGAGTTGGGTGAGAGTGA+GGG	+	Chr4:89479343-89479362	None:intergenic	55.0%
	GCCTGAAGAGGACCCAAACT+AGG	+	Chr4:89479975-89479994	None:intergenic	55.0%
	GCGTGGATGGAGTGATGAAG+AGG	+	Chr4:89479492-89479511	None:intergenic	55.0%
	GCTGTCGGATTATCCCCATC+GGG	-	Chr4:89479426-89479445	MsG0480023757.01.T01:CDS	55.0%
	GGATGGAGTGATGAAGAGGG+AGG	+	Chr4:89479488-89479507	None:intergenic	55.0%
	GGTGGAGAAAGACGGAGCTA+TGG	-	Chr4:89480058-89480077	MsG0480023757.01.T01:CDS	55.0%
	TCCACAATCGCCATCCCAGA+TGG	+	Chr4:89479900-89479919	None:intergenic	55.0%
	TCGGATTATCCCCATCGGGT+CGG	-	Chr4:89479430-89479449	MsG0480023757.01.T01:CDS	55.0%
	TGAGGAGAAACTGTTCGGCG+TGG	+	Chr4:89479509-89479528	None:intergenic	55.0%
	TTTGGGTCCTCTTCAGGCTG+CGG	-	Chr4:89479977-89479996	MsG0480023757.01.T01:CDS	55.0%
!	ACCATCTGGGATGGCGATTG+TGG	-	Chr4:89479896-89479915	MsG0480023757.01.T01:CDS	55.0%
!	AGCTTTAACCCGTTGGTGCG+TGG	+	Chr4:89479756-89479775	None:intergenic	55.0%
!	GTGGTGGCGTTTATTGTCGC+CGG	-	Chr4:89479999-89480018	MsG0480023757.01.T01:CDS	55.0%
!	TGAGATCGTGGGTGCTGTGT+TGG	-	Chr4:89480037-89480056	MsG0480023757.01.T01:CDS	55.0%
	AATTGCCGGCAGTGGCCACA+GGG	+	Chr4:89479588-89479607	None:intergenic	60.0%
	GAGTGATGAAGAGGGAGGCC+TGG	+	Chr4:89479483-89479502	None:intergenic	60.0%
	GGAGATTGGGTTCGTCGTGG+AGG	+	Chr4:89479542-89479561	None:intergenic	60.0%
	GGAGGAGTTGGGTGAGAGTG+AGG	+	Chr4:89479344-89479363	None:intergenic	60.0%
	GGGCGGAGGTGACAAGTGAT+GGG	+	Chr4:89479365-89479384	None:intergenic	60.0%
	GTGGCGTTTATTGTCGCCGG+CGG	-	Chr4:89480002-89480021	MsG0480023757.01.T01:CDS	60.0%
	TGGGCGGAGGTGACAAGTGA+TGG	+	Chr4:89479366-89479385	None:intergenic	60.0%
!	CGGAGGTGACAAGTGATGGG+AGG	+	Chr4:89479362-89479381	None:intergenic	60.0%
!	GATCGTGGGTGCTGTGTTGG+TGG	-	Chr4:89480040-89480059	MsG0480023757.01.T01:CDS	60.0%
	CGGCGGAGACGGCAAATGAG+TGG	+	Chr4:89479563-89479582	None:intergenic	65.0%
	CGGGTGCTCCGCGGATTTCT+TGG	+	Chr4:89479614-89479633	None:intergenic	65.0%
	GAATTGCCGGCAGTGGCCAC+AGG	+	Chr4:89479589-89479608	None:intergenic	65.0%
	GCGTTTATTGTCGCCGGCGG+CGG	-	Chr4:89480005-89480024	MsG0480023757.01.T01:CDS	65.0%
	TCCTCTTCAGGCTGCGGTGG+TGG	-	Chr4:89479983-89480002	MsG0480023757.01.T01:CDS	65.0%
	GCCACCACCGCAGCCTGAAG+AGG	+	Chr4:89479987-89480006	None:intergenic	70.0%
	GGAGATGGGTGGTCGGGCGA+GGG	+	Chr4:89479391-89479410	None:intergenic	70.0%
	GGGTCCTCTTCAGGCTGCGG+TGG	-	Chr4:89479980-89479999	MsG0480023757.01.T01:CDS	70.0%
	GGGTGGTCGGGCGAGGGATT+GGG	+	Chr4:89479385-89479404	None:intergenic	70.0%
	TGGAGATGGGTGGTCGGGCG+AGG	+	Chr4:89479392-89479411	None:intergenic	70.0%
	TGGGTGGTCGGGCGAGGGAT+TGG	+	Chr4:89479386-89479405	None:intergenic	70.0%
	TGGTCGGGCGAGGGATTGGG+CGG	+	Chr4:89479382-89479401	None:intergenic	70.0%
	CCGCTCCCTGTGGCCACTGC+CGG	-	Chr4:89479580-89479599	MsG0480023757.01.T01:CDS	75.0%
	CCGGCAGTGGCCACAGGGAG+CGG	+	Chr4:89479583-89479602	None:intergenic	75.0%
	GCAGTGGCCACAGGGAGCGG+CGG	+	Chr4:89479580-89479599	None:intergenic	75.0%
	GCCACAGGGAGCGGCGGAGA+CGG	+	Chr4:89479574-89479593	None:intergenic	75.0%
	TCGGGCGAGGGATTGGGCGG+AGG	+	Chr4:89479379-89479398	None:intergenic	75.0%
!	GCCGTCTCCGCCGCTCCCTG+TGG	-	Chr4:89479570-89479589	MsG0480023757.01.T01:CDS	80.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	89479324	89480169	89479324	ID=MsG0480023757.01;Name=MsG0480023757.01
Chr4	mRNA	89479324	89480169	89479324	ID=MsG0480023757.01.T01;Parent=MsG0480023757.01;Name=MsG0480023757.01.T01;_AED=0.49;_eAED=0.49;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|281
Chr4	exon	89479324	89480169	89479324	ID=MsG0480023757.01.T01:exon:62574;Parent=MsG0480023757.01.T01
Chr4	CDS	89479324	89480169	89479324	ID=MsG0480023757.01.T01:cds;Parent=MsG0480023757.01.T01

Gene Sequence

>MsG0480023757.01.T01

ATGGCCAAATCTTCATCCCTCACTCTCACCCAACTCCTCCCATCACTTGTCACCTCCGCCCAATCCCTCGCCCGACCACCCATCTCCAATTTCCACGTCGGAGCTGTCGGATTATCCCCATCGGGTCGGATCTTAATCGGAGTCAATGTCGAATTCCCAGGCCTCCCTCTTCATCACTCCATCCACGCCGAACAGTTTCTCCTCACAAATCTCTCCCTCCACGACGAACCCAATCTCCACTCATTTGCCGTCTCCGCCGCTCCCTGTGGCCACTGCCGGCAATTCTTCCAAGAAATCCGCGGAGCACCCGATATTCAAATCATCATTACCTCCGAATCTGACCCAAATTTCACTTCTCTGTCTCATTTTCTTCCTTACAGATTTGGACCACACGATCTTCTCCCTCAACACGCTCCTCTGTTTTTGGAACCACGCACCAACGGGTTAAAGCTTCTTCCGTTAACAACAGAGAAACTATCCAATGGCGTTTGCAACGGTGATTCGCTTCATGAGAAGCTAAAGATTGCGGCTATGGAGGCTGCGAATAAATCGCATGCTCCTTATAGTAATTCACCATCTGGGATGGCGATTGTGGATTGTAATGGAAAAATCTATAAAGGATCTTATGTTGAATCGGCGGCGTTTAATCCTAGTTTGGGTCCTCTTCAGGCTGCGGTGGTGGCGTTTATTGTCGCCGGCGGCGGTAAGTATGATGAGATCGTGGGTGCTGTGTTGGTGGAGAAAGACGGAGCTATGGTGAAACAAGAGGGCACTGTTAAATTGTTGCTTGAAACTATTTCTCCTAAATGTCAATTGCAGACTTTACTCTGTTCCTTTGATGAATGA

Protein sequence

>MsG0480023757.01.T01

MAKSSSLTLTQLLPSLVTSAQSLARPPISNFHVGAVGLSPSGRILIGVNVEFPGLPLHHSIHAEQFLLTNLSLHDEPNLHSFAVSAAPCGHCRQFFQEIRGAPDIQIIITSESDPNFTSLSHFLPYRFGPHDLLPQHAPLFLEPRTNGLKLLPLTTEKLSNGVCNGDSLHEKLKIAAMEAANKSHAPYSNSPSGMAIVDCNGKIYKGSYVESAAFNPSLGPLQAAVVAFIVAGGGKYDEIVGAVLVEKDGAMVKQEGTVKLLLETISPKCQLQTLLCSFDE*