AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045555.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045555.01.T01 MTR_8g074030 75.305 328 47 4 12 305 40 367 7.73e-163 457
MsG0880045555.01.T01 MTR_8g074030 73.099 342 34 6 12 305 40 371 1.94e-162 457
MsG0880045555.01.T01 MTR_5g023740 67.683 328 72 4 12 305 36 363 1.73e-145 414
MsG0880045555.01.T01 MTR_5g023740 66.867 332 72 4 12 305 36 367 6.68e-145 412
MsG0880045555.01.T01 MTR_5g023740 60.504 238 60 4 12 215 36 273 6.16e-85 257
MsG0880045555.01.T01 MTR_5g023740 59.504 242 60 4 12 215 36 277 2.03e-84 256
MsG0880045555.01.T01 MTR_5g023740 59.504 242 60 4 12 215 36 277 3.66e-84 255
MsG0880045555.01.T01 MTR_3g101470 37.647 340 166 7 8 304 17 353 1.03e-59 194
MsG0880045555.01.T01 MTR_1g064070 36.416 346 172 7 3 304 17 358 2.66e-59 194
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045555.01.T01 AT4G35260 64.653 331 79 4 13 305 37 367 2.58e-139 398
MsG0880045555.01.T01 AT4G35650 61.329 331 90 3 13 305 38 368 7.90e-134 384
MsG0880045555.01.T01 AT2G17130 63.303 327 86 4 13 305 37 363 1.34e-133 384
MsG0880045555.01.T01 AT2G17130 62.538 331 86 4 13 305 37 367 6.08e-133 382
MsG0880045555.01.T01 AT5G03290 35.608 337 169 6 12 304 42 374 8.11e-59 193
MsG0880045555.01.T01 AT3G09810 34.694 343 164 7 12 304 42 374 6.91e-53 177
MsG0880045555.01.T01 AT1G32480 56.780 118 38 3 13 129 2 107 4.50e-35 126

Find 91 sgRNAs with CRISPR-Local

Find 354 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGATCCCGTCGCCGGGAATT+AGG 0.140896 8:-61013507 None:intergenic
AAGAATAAGGTTTGTCTTAA+AGG 0.160532 8:+61013655 MsG0880045555.01.T01:CDS
CCACTATCACTCTGAATTTC+AGG 0.203009 8:-61018398 None:intergenic
ACGTTGATATTGTAGTTATT+AGG 0.239338 8:+61013803 MsG0880045555.01.T01:CDS
CTAGATTTCCATACAGATTT+GGG 0.243372 8:-61016566 None:intergenic
AAAGGTTTGTGATTGCAATA+TGG 0.246112 8:+61014354 MsG0880045555.01.T01:intron
ACTAGATTTCCATACAGATT+TGG 0.273061 8:-61016567 None:intergenic
CGTTGATATTGTAGTTATTA+GGG 0.273382 8:+61013804 MsG0880045555.01.T01:CDS
GTGTTGCATAAACATTATTC+AGG 0.286299 8:-61018347 None:intergenic
TGAATCGATCCGTAAGAATA+AGG 0.290840 8:+61013642 MsG0880045555.01.T01:CDS
TGTGCACCCATCAATCAAAT+TGG 0.309585 8:+61018307 MsG0880045555.01.T01:three_prime_UTR
GGGAATTAGGGTTACGGGAC+GGG 0.328866 8:-61013494 None:intergenic
GGAATTAGGGTTACGGGACG+GGG 0.332478 8:-61013493 None:intergenic
TTACTGCATCGACAACTTCT+TGG 0.351267 8:-61018195 None:intergenic
CTTGAACATGAGGTTGTTCC+CGG 0.354977 8:+61013852 MsG0880045555.01.T01:CDS
AATACTGCGGCAGGCATTGC+TGG 0.359026 8:+61016594 MsG0880045555.01.T01:CDS
AGGTGGATTGGTTACTCCTA+TGG 0.365893 8:+61013675 MsG0880045555.01.T01:CDS
GATCCCGTCGCCGGGAATTA+GGG 0.383912 8:-61013506 None:intergenic
AAGGTTTGTGATTGCAATAT+GGG 0.384383 8:+61014355 MsG0880045555.01.T01:intron
GGTCAGCAAATGCAGGAAAC+TGG 0.384422 8:-61018096 None:intergenic
TCCTGCATTTGCTGACCGTT+TGG 0.391960 8:+61018102 MsG0880045555.01.T01:CDS
TCGAATTTCTCAAAGTAAAC+TGG 0.397465 8:-61013580 None:intergenic
GCTATTTCCAATTTGATTGA+TGG 0.405150 8:-61018314 None:intergenic
TACTGCATCGACAACTTCTT+GGG 0.411456 8:-61018194 None:intergenic
GCAGGCATTGCTGGAGGCAC+TGG 0.419145 8:+61016603 MsG0880045555.01.T01:CDS
TAAGACAAACCTTATTCTTA+CGG 0.426710 8:-61013651 None:intergenic
CCTGAAATTCAGAGTGATAG+TGG 0.428416 8:+61018398 MsG0880045555.01.T01:three_prime_UTR
GAATTAGGGTTACGGGACGG+GGG 0.435371 8:-61013492 None:intergenic
TCGCCGGGAATTAGGGTTAC+GGG 0.436127 8:-61013499 None:intergenic
CGGTGTCGTCGAAAGTCTTA+AGG 0.445057 8:+61013872 MsG0880045555.01.T01:CDS
CGGCGCCGTTGAGCAACTAA+TGG 0.458955 8:+61013543 MsG0880045555.01.T01:CDS
TTTGAGCAGGGTGCTTCAGC+AGG 0.462492 8:+61017986 MsG0880045555.01.T01:CDS
GAGTGGTCCGATCCCGTCGC+CGG 0.471824 8:-61013515 None:intergenic
GGGATCGGACCACTCGTAAC+CGG 0.473370 8:+61013523 MsG0880045555.01.T01:CDS
TGAGCATGCTGTGTTTGAGC+AGG 0.476481 8:+61017973 MsG0880045555.01.T01:CDS
TTAAGACTTTCGACGACACC+GGG 0.476912 8:-61013870 None:intergenic
TCTCATCAGCTATGATGCTT+AGG 0.477441 8:+61018068 MsG0880045555.01.T01:CDS
CTAGTTGCAAATACTGCGGC+AGG 0.479098 8:+61016585 MsG0880045555.01.T01:CDS
GATGAGAGAAGAAGCGCCAC+TGG 0.479561 8:-61018052 None:intergenic
GGAGGCACTGGAGTCATGCC+AGG 0.483629 8:+61016615 MsG0880045555.01.T01:CDS
AATAAGGTTTGTCTTAAAGG+TGG 0.484570 8:+61013658 MsG0880045555.01.T01:CDS
GTCGCCGGGAATTAGGGTTA+CGG 0.486006 8:-61013500 None:intergenic
GGTTTGTCTTAAAGGTGGAT+TGG 0.488656 8:+61013663 MsG0880045555.01.T01:CDS
CTATTTCCAATTTGATTGAT+GGG 0.488920 8:-61018313 None:intergenic
AATTAGGGTTACGGGACGGG+GGG 0.490635 8:-61013491 None:intergenic
CTTAAGACTTTCGACGACAC+CGG 0.493025 8:-61013871 None:intergenic
TCCAAACGGTCAGCAAATGC+AGG 0.494673 8:-61018103 None:intergenic
CATTAGTTGCTCAACGGCGC+CGG 0.494753 8:-61013542 None:intergenic
TTTGAGAAATTCGACGTACA+TGG 0.504755 8:+61013589 MsG0880045555.01.T01:CDS
TAACCCTAATTCCCGGCGAC+GGG 0.510103 8:+61013503 MsG0880045555.01.T01:CDS
TTGGTTACTCCTATGGGTGG+TGG 0.528515 8:+61013682 MsG0880045555.01.T01:CDS
GGTGGATTGGTTACTCCTAT+GGG 0.530483 8:+61013676 MsG0880045555.01.T01:CDS
GTTATTAGGGAGAATACTGA+AGG 0.530793 8:+61013817 MsG0880045555.01.T01:CDS
AGTGGTCCGATCCCGTCGCC+GGG 0.532047 8:-61013514 None:intergenic
TAGGTTACCCCAAATCTGTA+TGG 0.533364 8:+61016558 MsG0880045555.01.T01:intron
CGCTTCCATTAGTTGCTCAA+CGG 0.535249 8:-61013548 None:intergenic
CTAATTCCCGGCGACGGGAT+CGG 0.538156 8:+61013508 MsG0880045555.01.T01:CDS
CGTCCCGTAACCCTAATTCC+CGG 0.547258 8:+61013496 MsG0880045555.01.T01:CDS
CATCAAAAGTCGTGATGTTG+TGG 0.548771 8:-61014378 None:intergenic
CGGGAATTAGGGTTACGGGA+CGG 0.553127 8:-61013495 None:intergenic
GGTGCTTCAGCAGGAAATGT+TGG 0.556712 8:+61017995 MsG0880045555.01.T01:CDS
AAGTATCGGACAAAGGATCT+TGG 0.558261 8:+61018157 MsG0880045555.01.T01:CDS
GTAACCCTAATTCCCGGCGA+CGG 0.576168 8:+61013502 MsG0880045555.01.T01:CDS
GAATACTGAAGGGAGTATGC+TGG 0.577102 8:+61013828 MsG0880045555.01.T01:CDS
GAGCATGCTGTGTTTGAGCA+GGG 0.577817 8:+61017974 MsG0880045555.01.T01:CDS
GTAACCTACATGCACCGTCC+CGG 0.585438 8:+61013461 MsG0880045555.01.T01:CDS
TGCATCGACAACTTCTTGGG+TGG 0.586969 8:-61018191 None:intergenic
TATCGGACAAAGGATCTTGG+AGG 0.597549 8:+61018160 MsG0880045555.01.T01:CDS
TCATTCTAGAGGGCAAGTAT+CGG 0.606553 8:+61018143 MsG0880045555.01.T01:CDS
ATGAGAGAAGAAGCGCCACT+GGG 0.614739 8:-61018051 None:intergenic
GTTCGCTTAATGTTCAGTTG+AGG 0.618363 8:+61013710 MsG0880045555.01.T01:CDS
TCATGTCGTGTAGGTAACCC+AGG 0.619385 8:-61013778 None:intergenic
TCAACGGCGCCGGTTACGAG+TGG 0.629526 8:-61013532 None:intergenic
TCAACGTTATCATGTCGTGT+AGG 0.630854 8:-61013787 None:intergenic
TATTGATCGAGGAGAAAACA+TGG 0.632967 8:+61013921 MsG0880045555.01.T01:CDS
TAGATTTCCATACAGATTTG+GGG 0.633748 8:-61016565 None:intergenic
GAACTAACACCACCACCCAT+AGG 0.634743 8:-61013691 None:intergenic
GTATGCTGGTCTTGAACATG+AGG 0.635401 8:+61013842 MsG0880045555.01.T01:CDS
GTCGCCGGGACGGTGCATGT+AGG 0.635610 8:-61013465 None:intergenic
ATCGGACAAAGGATCTTGGA+GGG 0.644506 8:+61018161 MsG0880045555.01.T01:CDS
GGATTGGTTACTCCTATGGG+TGG 0.645378 8:+61013679 MsG0880045555.01.T01:CDS
TGACATGAAAGCTGTACCTA+CGG 0.647259 8:+61013612 MsG0880045555.01.T01:CDS
ACTGCGGCAGGCATTGCTGG+AGG 0.647366 8:+61016597 MsG0880045555.01.T01:CDS
TTATTAGGGAGAATACTGAA+GGG 0.659154 8:+61013818 MsG0880045555.01.T01:CDS
AGAGGGCAAGTATCGGACAA+AGG 0.667139 8:+61018150 MsG0880045555.01.T01:CDS
TTGACTATAAAAGATTGTCG+AGG 0.675640 8:-61018269 None:intergenic
GGCACTGGAGTCATGCCAGG+AGG 0.693153 8:+61016618 MsG0880045555.01.T01:CDS
ATCGATTCAAGAACTTCCGT+AGG 0.726256 8:-61013628 None:intergenic
AAGCGAAGCAATCATGAACG+AGG 0.728533 8:+61014414 MsG0880045555.01.T01:CDS
AAATCTAGTTGCAAATACTG+CGG 0.735896 8:+61016581 MsG0880045555.01.T01:CDS
ACAAAAGACAGCTAACCCAG+TGG 0.781740 8:+61018036 MsG0880045555.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTACAAAAATGACTATAAT+TGG - Chr8:61014228-61014247 None:intergenic 15.0%
!! CTGTAAAATAAAATTTAAAC+AGG - Chr8:61017422-61017441 None:intergenic 15.0%
!! TAAAGACATTAATATGAAAT+AGG - Chr8:61017147-61017166 None:intergenic 15.0%
!!! GTCATTTTTGTAATAATTTT+AGG + Chr8:61014234-61014253 MsG0880045555.01.T01:intron 15.0%
!!! TAGTTTATTTCTTAATTTTG+TGG + Chr8:61014323-61014342 MsG0880045555.01.T01:intron 15.0%
!!! TGTTTGTATAATTTTTTTTG+AGG + Chr8:61017356-61017375 MsG0880045555.01.T01:intron 15.0%
!!! TTATATAGGTTCTTTTTTTT+TGG + Chr8:61015020-61015039 MsG0880045555.01.T01:intron 15.0%
!! AACATTCTCACAAATTATAT+AGG + Chr8:61015006-61015025 MsG0880045555.01.T01:intron 20.0%
!! AAGGTAATGTTTAAAAACTT+TGG - Chr8:61016284-61016303 None:intergenic 20.0%
!! AGTGAATTTATAAAGTTAAG+TGG - Chr8:61016236-61016255 None:intergenic 20.0%
!! ATTTAATAGTTCTTAATTCC+AGG - Chr8:61015758-61015777 None:intergenic 20.0%
!! CATCATAGATTAAAGAAAAA+TGG - Chr8:61015379-61015398 None:intergenic 20.0%
!! CTGTTAGACTAATTAAATAT+AGG - Chr8:61017184-61017203 None:intergenic 20.0%
!! TAAATACAACGAAATTATTG+TGG + Chr8:61015288-61015307 MsG0880045555.01.T01:intron 20.0%
!! TAGACTAATTAAATATAGGT+TGG - Chr8:61017180-61017199 None:intergenic 20.0%
!! TATATAAGTATGTCCTAAAA+TGG - Chr8:61014955-61014974 None:intergenic 20.0%
!! TATGTGAAATATGAATATGA+TGG + Chr8:61017786-61017805 MsG0880045555.01.T01:intron 20.0%
!! TGAAATTTCATAAATGTGTA+GGG + Chr8:61014298-61014317 MsG0880045555.01.T01:intron 20.0%
!! TTGAAATTTCATAAATGTGT+AGG + Chr8:61014297-61014316 MsG0880045555.01.T01:intron 20.0%
!!! AATTTTGTGGTTTCTTAAAA+AGG + Chr8:61014336-61014355 MsG0880045555.01.T01:intron 20.0%
!!! ACAAAAAAAAGTACTGAATT+TGG - Chr8:61014898-61014917 None:intergenic 20.0%
!!! CATTTTTCTTTAATCTATGA+TGG + Chr8:61015377-61015396 MsG0880045555.01.T01:intron 20.0%
!!! CTCAATTTTATAAATGTTTC+TGG - Chr8:61015810-61015829 None:intergenic 20.0%
!!! CTTGAATTTTTGAATTGTTT+GGG - Chr8:61017030-61017049 None:intergenic 20.0%
!!! GTAGGATTTTGAATATTTTA+AGG + Chr8:61014262-61014281 MsG0880045555.01.T01:intron 20.0%
!!! TAATAATTTTAGGTTTGAGT+AGG + Chr8:61014244-61014263 MsG0880045555.01.T01:intron 20.0%
!!! TTAATTGTTTTAATCTTCCT+GGG + Chr8:61013761-61013780 MsG0880045555.01.T01:CDS 20.0%
! AACATTATGGATTCTCTATT+AGG - Chr8:61014176-61014195 None:intergenic 25.0%
! AAGAATAAGGTTTGTCTTAA+AGG + Chr8:61013655-61013674 MsG0880045555.01.T01:CDS 25.0%
! AAGCTTCATTATATTTGCTT+TGG - Chr8:61015212-61015231 None:intergenic 25.0%
! AATAAAATGTCTGATTGTCT+TGG + Chr8:61017688-61017707 MsG0880045555.01.T01:intron 25.0%
! ACGTTGATATTGTAGTTATT+AGG + Chr8:61013803-61013822 MsG0880045555.01.T01:CDS 25.0%
! ACTCTTTATAAACTCATTTC+AGG - Chr8:61014098-61014117 None:intergenic 25.0%
! AGACAGAAGTAGAAATAAAT+GGG + Chr8:61017297-61017316 MsG0880045555.01.T01:intron 25.0%
! AGCTTCATTATATTTGCTTT+GGG - Chr8:61015211-61015230 None:intergenic 25.0%
! ATAAAATGTCTGATTGTCTT+GGG + Chr8:61017689-61017708 MsG0880045555.01.T01:intron 25.0%
! ATTTAAGGGTAGAAATATGT+CGG - Chr8:61017751-61017770 None:intergenic 25.0%
! ATTTCGTTGTATTTAATTCC+AGG - Chr8:61015283-61015302 None:intergenic 25.0%
! CAATCAATAACCTAGTTTAT+TGG - Chr8:61014504-61014523 None:intergenic 25.0%
! CCAAACAATTCAAAAATTCA+AGG + Chr8:61017028-61017047 MsG0880045555.01.T01:intron 25.0%
! CGTTGATATTGTAGTTATTA+GGG + Chr8:61013804-61013823 MsG0880045555.01.T01:CDS 25.0%
! CTATTTCCAATTTGATTGAT+GGG - Chr8:61018316-61018335 None:intergenic 25.0%
! GAAAATAGATGTATTACAGA+AGG + Chr8:61014523-61014542 MsG0880045555.01.T01:intron 25.0%
! GAACTTAAATTAACCTTGAA+TGG + Chr8:61014629-61014648 MsG0880045555.01.T01:intron 25.0%
! TAAGACAAACCTTATTCTTA+CGG - Chr8:61013654-61013673 None:intergenic 25.0%
! TAGACAGAAGTAGAAATAAA+TGG + Chr8:61017296-61017315 MsG0880045555.01.T01:intron 25.0%
! TAGACTAAACAATTTATACC+AGG - Chr8:61017116-61017135 None:intergenic 25.0%
! TCATTAACTACATTAACATC+TGG + Chr8:61016890-61016909 MsG0880045555.01.T01:intron 25.0%
!! ATTTATACCAGGTTTTCAAA+AGG - Chr8:61017105-61017124 None:intergenic 25.0%
!! CCTTGAATTTTTGAATTGTT+TGG - Chr8:61017031-61017050 None:intergenic 25.0%
!! GAATAATGTTCTAAACTTGA+TGG + Chr8:61016743-61016762 MsG0880045555.01.T01:intron 25.0%
!! TATTAACCATCTCTTTTGTT+TGG + Chr8:61015415-61015434 MsG0880045555.01.T01:intron 25.0%
!! TTTTAATCCAAATATTACCC+TGG - Chr8:61014862-61014881 None:intergenic 25.0%
!!! ATTTTTTTTGAGGTCTTTCA+TGG + Chr8:61017366-61017385 MsG0880045555.01.T01:intron 25.0%
!!! GTTAATTGTTTTAATCTTCC+TGG + Chr8:61013760-61013779 MsG0880045555.01.T01:CDS 25.0%
!!! TTCTTGTTTTATATTGATCG+AGG + Chr8:61013910-61013929 MsG0880045555.01.T01:CDS 25.0%
!!! TTTGACTTGATATTTTTGGT+AGG + Chr8:61015101-61015120 MsG0880045555.01.T01:intron 25.0%
AAAGGTTTGTGATTGCAATA+TGG + Chr8:61014354-61014373 MsG0880045555.01.T01:intron 30.0%
AAATCTAGTTGCAAATACTG+CGG + Chr8:61016581-61016600 MsG0880045555.01.T01:CDS 30.0%
AAGGTTTGTGATTGCAATAT+GGG + Chr8:61014355-61014374 MsG0880045555.01.T01:intron 30.0%
AATAAGGTTTGTCTTAAAGG+TGG + Chr8:61013658-61013677 MsG0880045555.01.T01:CDS 30.0%
AATCTTGTAGCCAATAAACT+AGG + Chr8:61014491-61014510 MsG0880045555.01.T01:intron 30.0%
AATTTGTGAAGGTAGTAGTA+TGG + Chr8:61017464-61017483 MsG0880045555.01.T01:intron 30.0%
ACTAGATTTCCATACAGATT+TGG - Chr8:61016570-61016589 None:intergenic 30.0%
AGCAAATATAATGAAGCTTG+CGG + Chr8:61015213-61015232 MsG0880045555.01.T01:intron 30.0%
ATAATCAGATCAAAGCTCTA+AGG - Chr8:61016673-61016692 None:intergenic 30.0%
ATAGAGAGTAGAAAAGATTC+AGG - Chr8:61015927-61015946 None:intergenic 30.0%
ATGCCACAACAACAAAATTT+AGG - Chr8:61017612-61017631 None:intergenic 30.0%
ATTAGTGAAATGTGTGCAAA+TGG + Chr8:61017003-61017022 MsG0880045555.01.T01:intron 30.0%
CAATGTTGAATACTTAACCA+AGG - Chr8:61014813-61014832 None:intergenic 30.0%
CACAAACAGTTCATGAAAAA+CGG - Chr8:61015516-61015535 None:intergenic 30.0%
CACAACTTCAATTTAAACCT+TGG + Chr8:61014793-61014812 MsG0880045555.01.T01:intron 30.0%
CTAACAGACTAATATGCAAT+GGG + Chr8:61017197-61017216 MsG0880045555.01.T01:intron 30.0%
CTAACTCATCCTTACAAAAT+CGG - Chr8:61014139-61014158 None:intergenic 30.0%
CTAGATTTCCATACAGATTT+GGG - Chr8:61016569-61016588 None:intergenic 30.0%
CTTGGTTAAGTATTCAACAT+TGG + Chr8:61014811-61014830 MsG0880045555.01.T01:intron 30.0%
GCATCTGATAATTGTTAACA+TGG + Chr8:61015853-61015872 MsG0880045555.01.T01:intron 30.0%
GGTAGTGTATTTAGGTAAAT+AGG - Chr8:61017644-61017663 None:intergenic 30.0%
GTACTTTGTGGAATATTGAA+GGG + Chr8:61016358-61016377 MsG0880045555.01.T01:intron 30.0%
GTATTTAATTCCAGGATACT+TGG - Chr8:61015275-61015294 None:intergenic 30.0%
GTGAAATATGAATATGATGG+TGG + Chr8:61017789-61017808 MsG0880045555.01.T01:intron 30.0%
GTGTTGCATAAACATTATTC+AGG - Chr8:61018350-61018369 None:intergenic 30.0%
GTTGAAAAAGTCATTCTAGA+GGG + Chr8:61018133-61018152 MsG0880045555.01.T01:CDS 30.0%
TAAACAAGGTTTGAATGTCT+AGG + Chr8:61016027-61016046 MsG0880045555.01.T01:intron 30.0%
TAACAATTATCAGATGCTGT+TGG - Chr8:61015850-61015869 None:intergenic 30.0%
TAACTAAAAACTATACCTCC+TGG - Chr8:61016636-61016655 None:intergenic 30.0%
TACATCCTAAGATACGTTAA+AGG - Chr8:61016139-61016158 None:intergenic 30.0%
TACGTGTCTAAAGAACATTA+TGG - Chr8:61014189-61014208 None:intergenic 30.0%
TAGAGAGTAGAAAAGATTCA+GGG - Chr8:61015926-61015945 None:intergenic 30.0%
TAGATTTCCATACAGATTTG+GGG - Chr8:61016568-61016587 None:intergenic 30.0%
TATCTACACATGAATGACAA+GGG - Chr8:61016071-61016090 None:intergenic 30.0%
TCGAATTTCTCAAAGTAAAC+TGG - Chr8:61013583-61013602 None:intergenic 30.0%
TCTAACAGACTAATATGCAA+TGG + Chr8:61017196-61017215 MsG0880045555.01.T01:intron 30.0%
TGTACTTTGTGGAATATTGA+AGG + Chr8:61016357-61016376 MsG0880045555.01.T01:intron 30.0%
TGTTGAAAAAGTCATTCTAG+AGG + Chr8:61018132-61018151 MsG0880045555.01.T01:CDS 30.0%
TTAGGATGTAGAAGTTTAGA+GGG + Chr8:61016149-61016168 MsG0880045555.01.T01:intron 30.0%
TTATTAGGGAGAATACTGAA+GGG + Chr8:61013818-61013837 MsG0880045555.01.T01:CDS 30.0%
TTATTATGTAGACAGAGTTG+AGG - Chr8:61017673-61017692 None:intergenic 30.0%
TTCAACCTTTAACGTATCTT+AGG + Chr8:61016131-61016150 MsG0880045555.01.T01:intron 30.0%
TTGACTATAAAAGATTGTCG+AGG - Chr8:61018272-61018291 None:intergenic 30.0%
TTTAAGGGTAGAAATATGTC+GGG - Chr8:61017750-61017769 None:intergenic 30.0%
! AATTTAAGTTCGAACCTAAG+AGG - Chr8:61014620-61014639 None:intergenic 30.0%
! ATATTTCTACCCTTAAATGG+AGG + Chr8:61017753-61017772 MsG0880045555.01.T01:intron 30.0%
! ATTTGAAGTTGTTTGTAGTG+TGG + Chr8:61014022-61014041 MsG0880045555.01.T01:intron 30.0%
! CATTGGAAACTAAGTTGAAA+TGG + Chr8:61014828-61014847 MsG0880045555.01.T01:intron 30.0%
! CCTTTTCAAACAGAAAGAAA+GGG - Chr8:61016191-61016210 None:intergenic 30.0%
! CTACTACCTTCACAAATTTT+TGG - Chr8:61017462-61017481 None:intergenic 30.0%
! GACATATTTCTACCCTTAAA+TGG + Chr8:61017750-61017769 MsG0880045555.01.T01:intron 30.0%
! GCTATTTCCAATTTGATTGA+TGG - Chr8:61018317-61018336 None:intergenic 30.0%
! TCCTTTTCAAACAGAAAGAA+AGG - Chr8:61016192-61016211 None:intergenic 30.0%
! TTTCAACAGCATTTTCCAAA+CGG - Chr8:61018120-61018139 None:intergenic 30.0%
!! AAATATGAATATGATGGTGG+TGG + Chr8:61017792-61017811 MsG0880045555.01.T01:intron 30.0%
!! CAAACTGAGTTTTATAAGTC+AGG + Chr8:61017321-61017340 MsG0880045555.01.T01:intron 30.0%
!! TGTTTTGGATGGATAAGTTA+GGG - Chr8:61016320-61016339 None:intergenic 30.0%
!!! AGACCTAAATTTTGTTGTTG+TGG + Chr8:61017606-61017625 MsG0880045555.01.T01:intron 30.0%
!!! TTGTTTTGGATGGATAAGTT+AGG - Chr8:61016321-61016340 None:intergenic 30.0%
AATATAATGAAGCTTGCGGA+TGG + Chr8:61015217-61015236 MsG0880045555.01.T01:intron 35.0%
AATTCCAGGATAATGTGCTT+AGG - Chr8:61015744-61015763 None:intergenic 35.0%
ACCAACATTACCTGCAAAAA+AGG - Chr8:61017951-61017970 None:intergenic 35.0%
AGTTGCAAGACAAAATCATC+TGG - Chr8:61016459-61016478 None:intergenic 35.0%
ATCAACTTAGAAACGAGTCA+TGG + Chr8:61015588-61015607 MsG0880045555.01.T01:intron 35.0%
ATCAAGTTTATCCCACTAAG+TGG - Chr8:61013974-61013993 None:intergenic 35.0%
CCACTAATACCTCCATTTAA+GGG - Chr8:61017765-61017784 None:intergenic 35.0%
CCCTTTCTTTCTGTTTGAAA+AGG + Chr8:61016188-61016207 MsG0880045555.01.T01:intron 35.0%
CTATCTACACATGAATGACA+AGG - Chr8:61016072-61016091 None:intergenic 35.0%
CTTAGGATGTAGAAGTTTAG+AGG + Chr8:61016148-61016167 MsG0880045555.01.T01:intron 35.0%
GACTTTGATCTCAACTTACA+TGG - Chr8:61015987-61016006 None:intergenic 35.0%
GATCTCAACTTACATGGTTT+GGG - Chr8:61015981-61016000 None:intergenic 35.0%
GGTTTGTGTTTGTGATTATC+AGG - Chr8:61017921-61017940 None:intergenic 35.0%
GTTATTAGGGAGAATACTGA+AGG + Chr8:61013817-61013836 MsG0880045555.01.T01:CDS 35.0%
TAAGCAAGAATCATTGCTGT+GGG + Chr8:61016414-61016433 MsG0880045555.01.T01:intron 35.0%
TATTCACACATCAGATAACG+TGG - Chr8:61016728-61016747 None:intergenic 35.0%
TATTGATCGAGGAGAAAACA+TGG + Chr8:61013921-61013940 MsG0880045555.01.T01:CDS 35.0%
TCAGATAACGTGGTAAAAGT+AGG - Chr8:61016718-61016737 None:intergenic 35.0%
TCTTTCTGTTTGAAAAGGAG+AGG + Chr8:61016193-61016212 MsG0880045555.01.T01:intron 35.0%
TGAATCGATCCGTAAGAATA+AGG + Chr8:61013642-61013661 MsG0880045555.01.T01:CDS 35.0%
TGATCTCAACTTACATGGTT+TGG - Chr8:61015982-61016001 None:intergenic 35.0%
TGTTTATCCATGTCACAGAA+GGG - Chr8:61016013-61016032 None:intergenic 35.0%
TTAGACACGTATGTTTGCAA+GGG + Chr8:61014198-61014217 MsG0880045555.01.T01:intron 35.0%
TTCTGTGACATGGATAAACA+AGG + Chr8:61016013-61016032 MsG0880045555.01.T01:intron 35.0%
TTGTTTATCCATGTCACAGA+AGG - Chr8:61016014-61016033 None:intergenic 35.0%
TTTAATTCCAGGATACTTGG+TGG - Chr8:61015272-61015291 None:intergenic 35.0%
TTTAGACACGTATGTTTGCA+AGG + Chr8:61014197-61014216 MsG0880045555.01.T01:intron 35.0%
TTTGAGAAATTCGACGTACA+TGG + Chr8:61013589-61013608 MsG0880045555.01.T01:CDS 35.0%
! ACCAGGTTTTCAAAAGGTTA+GGG - Chr8:61017099-61017118 None:intergenic 35.0%
! ACTAAGTTGAAATGGTGTCA+AGG + Chr8:61014836-61014855 MsG0880045555.01.T01:intron 35.0%
! AGACTAATATGCAATGGGTT+AGG + Chr8:61017202-61017221 MsG0880045555.01.T01:intron 35.0%
! CGTTTTTCATGAACTGTTTG+TGG + Chr8:61015514-61015533 MsG0880045555.01.T01:intron 35.0%
! CTCTACAATCCGATTTTGTA+AGG + Chr8:61014127-61014146 MsG0880045555.01.T01:intron 35.0%
! GCTTGTCTAGATGATTGTTT+TGG + Chr8:61016786-61016805 MsG0880045555.01.T01:intron 35.0%
! TACCAGGTTTTCAAAAGGTT+AGG - Chr8:61017100-61017119 None:intergenic 35.0%
! TCTGTCATAGGCTTTCTTTT+AGG + Chr8:61017069-61017088 MsG0880045555.01.T01:intron 35.0%
! TGTTGTACTGATGCAGTATT+GGG + Chr8:61015066-61015085 MsG0880045555.01.T01:intron 35.0%
! TTGTTGTACTGATGCAGTAT+TGG + Chr8:61015065-61015084 MsG0880045555.01.T01:intron 35.0%
!! GTAGGCAAGAAGGTATTTAA+AGG - Chr8:61016700-61016719 None:intergenic 35.0%
!! GTTTTGGATGGATAAGTTAG+GGG - Chr8:61016319-61016338 None:intergenic 35.0%
!! TCATAGGCTTTCTTTTAGGT+TGG + Chr8:61017073-61017092 MsG0880045555.01.T01:intron 35.0%
!! TGTTCTAAACTTGATGGACT+AGG + Chr8:61016749-61016768 MsG0880045555.01.T01:intron 35.0%
!!! GCGGTTTGACTTGATATTTT+TGG + Chr8:61015097-61015116 MsG0880045555.01.T01:intron 35.0%
!!! GGCTTTTTGGTAGTGTATTT+AGG - Chr8:61017652-61017671 None:intergenic 35.0%
!!! TGCTATTGTTTTTTCACTGC+TGG + Chr8:61015672-61015691 MsG0880045555.01.T01:intron 35.0%
AAAGTACATCTACATCCTCC+AGG - Chr8:61016345-61016364 None:intergenic 40.0%
AAGATTCAGGGTAGGTCAAA+TGG - Chr8:61015914-61015933 None:intergenic 40.0%
AAGTACATCTACATCCTCCA+GGG - Chr8:61016344-61016363 None:intergenic 40.0%
ACCATGACATCAAAACTGCT+CGG - Chr8:61015343-61015362 None:intergenic 40.0%
ACCTTGCCAAACAAAAGAGA+TGG - Chr8:61015424-61015443 None:intergenic 40.0%
ATCTCCTAAGCACATTATCC+TGG + Chr8:61015737-61015756 MsG0880045555.01.T01:intron 40.0%
ATGGATAAGTTAGGGGAGAA+AGG - Chr8:61016312-61016331 None:intergenic 40.0%
ATTTCGCTAATCAGCACGTT+TGG + Chr8:61014725-61014744 MsG0880045555.01.T01:intron 40.0%
CATCAAAAGTCGTGATGTTG+TGG - Chr8:61014381-61014400 None:intergenic 40.0%
CCACTATCACTCTGAATTTC+AGG - Chr8:61018401-61018420 None:intergenic 40.0%
CCAGTATCTCACATCAATGA+CGG + Chr8:61014767-61014786 MsG0880045555.01.T01:intron 40.0%
CCTGAAATTCAGAGTGATAG+TGG + Chr8:61018398-61018417 MsG0880045555.01.T01:three_prime_UTR 40.0%
CGTCATTGATGTGAGATACT+GGG - Chr8:61014769-61014788 None:intergenic 40.0%
CTAAGCAAGAATCATTGCTG+TGG + Chr8:61016413-61016432 MsG0880045555.01.T01:intron 40.0%
CTTTCTCTTTCCAACCTCTT+AGG + Chr8:61014603-61014622 MsG0880045555.01.T01:intron 40.0%
GAAACGTACATGTAAGGAGA+AGG - Chr8:61014670-61014689 None:intergenic 40.0%
GACAAAATCATCTGGACCTA+AGG - Chr8:61016451-61016470 None:intergenic 40.0%
GAGGAAGAAACGTACATGTA+AGG - Chr8:61014676-61014695 None:intergenic 40.0%
GAGGATGTAGATGTACTTTG+TGG + Chr8:61016346-61016365 MsG0880045555.01.T01:intron 40.0%
GAGTAGAAAAGATTCAGGGT+AGG - Chr8:61015922-61015941 None:intergenic 40.0%
GATGTAGAAGTTTAGAGGGA+GGG + Chr8:61016153-61016172 MsG0880045555.01.T01:intron 40.0%
GCCACTAATACCTCCATTTA+AGG - Chr8:61017766-61017785 None:intergenic 40.0%
GGCTGAGAAGAACTGTTATT+TGG - Chr8:61015880-61015899 None:intergenic 40.0%
GGTTTGTCTTAAAGGTGGAT+TGG + Chr8:61013663-61013682 MsG0880045555.01.T01:CDS 40.0%
GTTACAATTGCATATGTGCC+AGG - Chr8:61014704-61014723 None:intergenic 40.0%
GTTCGCTTAATGTTCAGTTG+AGG + Chr8:61013710-61013729 MsG0880045555.01.T01:CDS 40.0%
TAAGTTCGAACCTAAGAGGT+TGG - Chr8:61014616-61014635 None:intergenic 40.0%
TAGGTTACCCCAAATCTGTA+TGG + Chr8:61016558-61016577 MsG0880045555.01.T01:intron 40.0%
TCAACGTTATCATGTCGTGT+AGG - Chr8:61013790-61013809 None:intergenic 40.0%
TCTCATCAGCTATGATGCTT+AGG + Chr8:61018068-61018087 MsG0880045555.01.T01:CDS 40.0%
TGACATGAAAGCTGTACCTA+CGG + Chr8:61013612-61013631 MsG0880045555.01.T01:CDS 40.0%
TGGATAAGTTAGGGGAGAAA+GGG - Chr8:61016311-61016330 None:intergenic 40.0%
TGTGCACCCATCAATCAAAT+TGG + Chr8:61018307-61018326 MsG0880045555.01.T01:three_prime_UTR 40.0%
TTATCCATCCAAAACAACCC+TGG + Chr8:61016324-61016343 MsG0880045555.01.T01:intron 40.0%
TTTATCCCACTAAGTGGTGT+CGG - Chr8:61013968-61013987 None:intergenic 40.0%
! ACCTGCAAAAAAGGCACAAA+TGG - Chr8:61017942-61017961 None:intergenic 40.0%
! ATCGATTCAAGAACTTCCGT+AGG - Chr8:61013631-61013650 None:intergenic 40.0%
! GATGTGAGATACTGGGTTTT+GGG - Chr8:61014762-61014781 None:intergenic 40.0%
! GATTTTGTCTTGCAACTCAC+TGG + Chr8:61016462-61016481 MsG0880045555.01.T01:intron 40.0%
! GCATACTTTTACCTTGTGCT+AGG + Chr8:61016539-61016558 MsG0880045555.01.T01:intron 40.0%
! TACTGCATCGACAACTTCTT+GGG - Chr8:61018197-61018216 None:intergenic 40.0%
! TAGACAGAGTTGAGGCTTTT+TGG - Chr8:61017665-61017684 None:intergenic 40.0%
! TCATTCTAGAGGGCAAGTAT+CGG + Chr8:61018143-61018162 MsG0880045555.01.T01:CDS 40.0%
! TGATGTGAGATACTGGGTTT+TGG - Chr8:61014763-61014782 None:intergenic 40.0%
! TTACTGCATCGACAACTTCT+TGG - Chr8:61018198-61018217 None:intergenic 40.0%
!! AAACGTGCTGATTAGCGAAA+TGG - Chr8:61014726-61014745 None:intergenic 40.0%
!! AAGTATCGGACAAAGGATCT+TGG + Chr8:61018157-61018176 MsG0880045555.01.T01:CDS 40.0%
!! ACCATCTCTTTTGTTTGGCA+AGG + Chr8:61015420-61015439 MsG0880045555.01.T01:intron 40.0%
!! ACGTTTCTTCCTCTAAAACC+TGG + Chr8:61014683-61014702 MsG0880045555.01.T01:intron 40.0%
!! CCCTTAAATGGAGGTATTAG+TGG + Chr8:61017762-61017781 MsG0880045555.01.T01:intron 40.0%
!! TATGAATATGATGGTGGTGG+TGG + Chr8:61017795-61017814 MsG0880045555.01.T01:intron 40.0%
!! TGAAAGTACTGATGGTAGGT+TGG + Chr8:61017818-61017837 MsG0880045555.01.T01:intron 40.0%
!!! ACCATTTGTGCCTTTTTTGC+AGG + Chr8:61017938-61017957 MsG0880045555.01.T01:intron 40.0%
!!! GCCTTTTTTGCAGGTAATGT+TGG + Chr8:61017947-61017966 MsG0880045555.01.T01:intron 40.0%
AAGCGAAGCAATCATGAACG+AGG + Chr8:61014414-61014433 MsG0880045555.01.T01:CDS 45.0%
ACAAAAGACAGCTAACCCAG+TGG + Chr8:61018036-61018055 MsG0880045555.01.T01:CDS 45.0%
AGTCAAACCCTTCTGTGACA+TGG + Chr8:61016003-61016022 MsG0880045555.01.T01:intron 45.0%
ATCGGACAAAGGATCTTGGA+GGG + Chr8:61018161-61018180 MsG0880045555.01.T01:CDS 45.0%
ATTCAGGGTAGGTCAAATGG+AGG - Chr8:61015911-61015930 None:intergenic 45.0%
CAAGAATCATTGCTGTGGGT+TGG + Chr8:61016418-61016437 MsG0880045555.01.T01:intron 45.0%
CAGTCAAAGGTTGGGAACAT+GGG + Chr8:61015697-61015716 MsG0880045555.01.T01:intron 45.0%
CCATGACATCAAAACTGCTC+GGG - Chr8:61015342-61015361 None:intergenic 45.0%
CCGTCATTGATGTGAGATAC+TGG - Chr8:61014770-61014789 None:intergenic 45.0%
CGCTTCCATTAGTTGCTCAA+CGG - Chr8:61013551-61013570 None:intergenic 45.0%
CGTGGTAAAAGTAGGCAAGA+AGG - Chr8:61016710-61016729 None:intergenic 45.0%
CTTAAGACTTTCGACGACAC+CGG - Chr8:61013874-61013893 None:intergenic 45.0%
CTTGAACATGAGGTTGTTCC+CGG + Chr8:61013852-61013871 MsG0880045555.01.T01:CDS 45.0%
GAAAGCCTATGACAGACAAC+AGG - Chr8:61017065-61017084 None:intergenic 45.0%
GCTAATCAGCACGTTTGGTT+GGG + Chr8:61014730-61014749 MsG0880045555.01.T01:intron 45.0%
GGATGTAGAAGTTTAGAGGG+AGG + Chr8:61016152-61016171 MsG0880045555.01.T01:intron 45.0%
GGCATGTGTAAAGGAGAATG+TGG - Chr8:61015960-61015979 None:intergenic 45.0%
GTACATGTAAGGAGAAGGCA+TGG - Chr8:61014665-61014684 None:intergenic 45.0%
GTCAAGGCCAGGGTAATATT+TGG + Chr8:61014852-61014871 MsG0880045555.01.T01:intron 45.0%
GTCACTTGCTTCTGTTGTTC+AGG - Chr8:61015182-61015201 None:intergenic 45.0%
GTTCTTGGAATCTTGTCGAG+AGG + Chr8:61015243-61015262 MsG0880045555.01.T01:intron 45.0%
TAGAAGTTTAGAGGGAGGGA+GGG + Chr8:61016157-61016176 MsG0880045555.01.T01:intron 45.0%
TATCGGACAAAGGATCTTGG+AGG + Chr8:61018160-61018179 MsG0880045555.01.T01:CDS 45.0%
TCAGTCAAAGGTTGGGAACA+TGG + Chr8:61015696-61015715 MsG0880045555.01.T01:intron 45.0%
TCTGACCTGTTGTCTGTCAT+AGG + Chr8:61017057-61017076 MsG0880045555.01.T01:intron 45.0%
TGTCTTGGGCAAACTAGACT+AGG + Chr8:61017703-61017722 MsG0880045555.01.T01:intron 45.0%
TTAAGACTTTCGACGACACC+GGG - Chr8:61013873-61013892 None:intergenic 45.0%
TTAGGGGAGAAAGGGATTGA+AGG - Chr8:61016303-61016322 None:intergenic 45.0%
! ATTTGGGGTAACCTAGCACA+AGG - Chr8:61016553-61016572 None:intergenic 45.0%
! CATGGTTTGGGCATGTGTAA+AGG - Chr8:61015969-61015988 None:intergenic 45.0%
! GAATACTGAAGGGAGTATGC+TGG + Chr8:61013828-61013847 MsG0880045555.01.T01:CDS 45.0%
! GAGCTGTCGTCTACCATTTT+AGG + Chr8:61014939-61014958 MsG0880045555.01.T01:intron 45.0%
! GCAGTATTGGGTTGTGTTTG+CGG + Chr8:61015078-61015097 MsG0880045555.01.T01:intron 45.0%
! TACATCCTCCAGGGTTGTTT+TGG - Chr8:61016335-61016354 None:intergenic 45.0%
! TTGAAATGGTGTCAAGGCCA+GGG + Chr8:61014842-61014861 MsG0880045555.01.T01:intron 45.0%
! TTGTTGGGTTTAGGGCTTCT+GGG + Chr8:61017847-61017866 MsG0880045555.01.T01:intron 45.0%
!! AGGTGGATTGGTTACTCCTA+TGG + Chr8:61013675-61013694 MsG0880045555.01.T01:CDS 45.0%
!! GCATATGTGCCAGGTTTTAG+AGG - Chr8:61014695-61014714 None:intergenic 45.0%
!! GCCCTAACCTTTTGAAAACC+TGG + Chr8:61017095-61017114 MsG0880045555.01.T01:intron 45.0%
!! GGTGGATTGGTTACTCCTAT+GGG + Chr8:61013676-61013695 MsG0880045555.01.T01:CDS 45.0%
!! GTATGCTGGTCTTGAACATG+AGG + Chr8:61013842-61013861 MsG0880045555.01.T01:CDS 45.0%
!! GTGGGTTGGTTATCAACCTT+AGG + Chr8:61016432-61016451 MsG0880045555.01.T01:intron 45.0%
!! GTGGTGAAAGTACTGATGGT+AGG + Chr8:61017814-61017833 MsG0880045555.01.T01:intron 45.0%
!! TGCTGGTTCAGTCAAAGGTT+GGG + Chr8:61015689-61015708 MsG0880045555.01.T01:intron 45.0%
!! TTCACTGCTGGTTCAGTCAA+AGG + Chr8:61015684-61015703 MsG0880045555.01.T01:intron 45.0%
!! TATATAATATTTGAAAAATA+AGG + Chr8:61014971-61014990 MsG0880045555.01.T01:intron 5.0%
AGAAGTTTAGAGGGAGGGAG+GGG + Chr8:61016158-61016177 MsG0880045555.01.T01:intron 50.0%
AGCAAAATCTCCGAGGGAAG+AGG + Chr8:61014453-61014472 MsG0880045555.01.T01:intron 50.0%
CCATCAAAAGCCTCTTCCCT+CGG - Chr8:61014466-61014485 None:intergenic 50.0%
CCCAGAGCAAAAGCTCTTGA+GGG + Chr8:61014567-61014586 MsG0880045555.01.T01:intron 50.0%
CCTAGACAGTGAGTCAACAG+AGG - Chr8:61016934-61016953 None:intergenic 50.0%
CGCTAATCAGCACGTTTGGT+TGG + Chr8:61014729-61014748 MsG0880045555.01.T01:intron 50.0%
CTAGTTGCAAATACTGCGGC+AGG + Chr8:61016585-61016604 MsG0880045555.01.T01:CDS 50.0%
GAACTAACACCACCACCCAT+AGG - Chr8:61013694-61013713 None:intergenic 50.0%
GAGCATGCTGTGTTTGAGCA+GGG + Chr8:61017974-61017993 MsG0880045555.01.T01:CDS 50.0%
GCAAAAGCTCTTGAGGGAAG+AGG + Chr8:61014573-61014592 MsG0880045555.01.T01:intron 50.0%
GGAGCTGGTTGTTGGGTTTA+GGG + Chr8:61017839-61017858 MsG0880045555.01.T01:intron 50.0%
GGCAAACTAGACTAGGCCAT+AGG + Chr8:61017710-61017729 MsG0880045555.01.T01:intron 50.0%
GGTCAAATGGAGGCAGAGAA+AGG - Chr8:61015901-61015920 None:intergenic 50.0%
GGTCAGCAAATGCAGGAAAC+TGG - Chr8:61018099-61018118 None:intergenic 50.0%
GGTGCTTCAGCAGGAAATGT+TGG + Chr8:61017995-61018014 MsG0880045555.01.T01:CDS 50.0%
GTAGAAGTTTAGAGGGAGGG+AGG + Chr8:61016156-61016175 MsG0880045555.01.T01:intron 50.0%
TCATGTCGTGTAGGTAACCC+AGG - Chr8:61013781-61013800 None:intergenic 50.0%
TCCAAACGGTCAGCAAATGC+AGG - Chr8:61018106-61018125 None:intergenic 50.0%
TCCATCCAAAACAACCCTGG+AGG + Chr8:61016327-61016346 MsG0880045555.01.T01:intron 50.0%
TGAGCATGCTGTGTTTGAGC+AGG + Chr8:61017973-61017992 MsG0880045555.01.T01:CDS 50.0%
TGGAGCTGGTTGTTGGGTTT+AGG + Chr8:61017838-61017857 MsG0880045555.01.T01:intron 50.0%
TGTAGCCGACACCACTTAGT+GGG + Chr8:61013960-61013979 MsG0880045555.01.T01:intron 50.0%
TTGGTTACTCCTATGGGTGG+TGG + Chr8:61013682-61013701 MsG0880045555.01.T01:CDS 50.0%
TTGTAGCCGACACCACTTAG+TGG + Chr8:61013959-61013978 MsG0880045555.01.T01:intron 50.0%
! AAGGAGAAGGCATGGCAAGA+CGG - Chr8:61014657-61014676 None:intergenic 50.0%
! CCCTCAAGAGCTTTTGCTCT+GGG - Chr8:61014570-61014589 None:intergenic 50.0%
! CCTCAAGAGCTTTTGCTCTG+GGG - Chr8:61014569-61014588 None:intergenic 50.0%
! GTAGGTTGGAGCTGGTTGTT+GGG + Chr8:61017832-61017851 MsG0880045555.01.T01:intron 50.0%
! GTTGAAATGGTGTCAAGGCC+AGG + Chr8:61014841-61014860 MsG0880045555.01.T01:intron 50.0%
! GTTGTTGGGTTTAGGGCTTC+TGG + Chr8:61017846-61017865 MsG0880045555.01.T01:intron 50.0%
! TACTGATGGTAGGTTGGAGC+TGG + Chr8:61017824-61017843 MsG0880045555.01.T01:intron 50.0%
! TATGTCGGGTTGTCTGACAG+AGG - Chr8:61017736-61017755 None:intergenic 50.0%
! TCCCTCAAGAGCTTTTGCTC+TGG - Chr8:61014571-61014590 None:intergenic 50.0%
! TCCCTCGGAGATTTTGCTCT+GGG - Chr8:61014451-61014470 None:intergenic 50.0%
! TCCTGCATTTGCTGACCGTT+TGG + Chr8:61018102-61018121 MsG0880045555.01.T01:CDS 50.0%
! TGCATCGACAACTTCTTGGG+TGG - Chr8:61018194-61018213 None:intergenic 50.0%
! TTCCCTCGGAGATTTTGCTC+TGG - Chr8:61014452-61014471 None:intergenic 50.0%
!! AGAGGGCAAGTATCGGACAA+AGG + Chr8:61018150-61018169 MsG0880045555.01.T01:CDS 50.0%
!! ATGAGAGAAGAAGCGCCACT+GGG - Chr8:61018054-61018073 None:intergenic 50.0%
!! CCCGAGCAGTTTTGATGTCA+TGG + Chr8:61015339-61015358 MsG0880045555.01.T01:intron 50.0%
!! CCTCTGTTGACTCACTGTCT+AGG + Chr8:61016931-61016950 MsG0880045555.01.T01:intron 50.0%
!! CGGTGTCGTCGAAAGTCTTA+AGG + Chr8:61013872-61013891 MsG0880045555.01.T01:CDS 50.0%
!! CTGCTGGTTCAGTCAAAGGT+TGG + Chr8:61015688-61015707 MsG0880045555.01.T01:intron 50.0%
!! GCTTGCGGATGGTTTGTTCT+TGG + Chr8:61015228-61015247 MsG0880045555.01.T01:intron 50.0%
!! GGATTGGTTACTCCTATGGG+TGG + Chr8:61013679-61013698 MsG0880045555.01.T01:CDS 50.0%
!! GGTGGTGGTGAAAGTACTGA+TGG + Chr8:61017810-61017829 MsG0880045555.01.T01:intron 50.0%
!!! AGCTTTTGCTCTGGGGTTAC+GGG - Chr8:61014562-61014581 None:intergenic 50.0%
!!! GAGCTTTTGCTCTGGGGTTA+CGG - Chr8:61014563-61014582 None:intergenic 50.0%
!!! TCCTCCAGGGTTGTTTTGGA+TGG - Chr8:61016331-61016350 None:intergenic 50.0%
AAGTTTAGAGGGAGGGAGGG+GGG + Chr8:61016160-61016179 MsG0880045555.01.T01:intron 55.0%
AATTAGGGTTACGGGACGGG+GGG - Chr8:61013494-61013513 None:intergenic 55.0%
ACCCCAGAGCAAAATCTCCG+AGG + Chr8:61014446-61014465 MsG0880045555.01.T01:intron 55.0%
CATTAGTTGCTCAACGGCGC+CGG - Chr8:61013545-61013564 None:intergenic 55.0%
CCCCAGAGCAAAAGCTCTTG+AGG + Chr8:61014566-61014585 MsG0880045555.01.T01:intron 55.0%
CCCCAGAGCAAAATCTCCGA+GGG + Chr8:61014447-61014466 MsG0880045555.01.T01:intron 55.0%
CGGGAATTAGGGTTACGGGA+CGG - Chr8:61013498-61013517 None:intergenic 55.0%
CGTCCCGTAACCCTAATTCC+CGG + Chr8:61013496-61013515 MsG0880045555.01.T01:CDS 55.0%
GAAGTTTAGAGGGAGGGAGG+GGG + Chr8:61016159-61016178 MsG0880045555.01.T01:intron 55.0%
GAATTAGGGTTACGGGACGG+GGG - Chr8:61013495-61013514 None:intergenic 55.0%
GAGGTTGCCACCAAGTATCC+TGG + Chr8:61015262-61015281 MsG0880045555.01.T01:intron 55.0%
GGAATTAGGGTTACGGGACG+GGG - Chr8:61013496-61013515 None:intergenic 55.0%
GGGAATTAGGGTTACGGGAC+GGG - Chr8:61013497-61013516 None:intergenic 55.0%
GGTTGTCTGACAGAGGCCTA+TGG - Chr8:61017729-61017748 None:intergenic 55.0%
GTAACCCTAATTCCCGGCGA+CGG + Chr8:61013502-61013521 MsG0880045555.01.T01:CDS 55.0%
GTAACCTACATGCACCGTCC+CGG + Chr8:61013461-61013480 MsG0880045555.01.T01:CDS 55.0%
GTCGCCGGGAATTAGGGTTA+CGG - Chr8:61013503-61013522 None:intergenic 55.0%
TAACCCTAATTCCCGGCGAC+GGG + Chr8:61013503-61013522 MsG0880045555.01.T01:CDS 55.0%
TCGCCGGGAATTAGGGTTAC+GGG - Chr8:61013502-61013521 None:intergenic 55.0%
TGGCAAGACGGAGCCATTCA+AGG - Chr8:61014645-61014664 None:intergenic 55.0%
TGTTCACGTCTCAGCACGAC+TGG - Chr8:61017259-61017278 None:intergenic 55.0%
! AATACTGCGGCAGGCATTGC+TGG + Chr8:61016594-61016613 MsG0880045555.01.T01:CDS 55.0%
! CCCTCGGAGATTTTGCTCTG+GGG - Chr8:61014450-61014469 None:intergenic 55.0%
! CCGAGGGAAGAGGCTTTTGA+TGG + Chr8:61014463-61014482 MsG0880045555.01.T01:intron 55.0%
! GGTAGGTTGGAGCTGGTTGT+TGG + Chr8:61017831-61017850 MsG0880045555.01.T01:intron 55.0%
! TTTGAGCAGGGTGCTTCAGC+AGG + Chr8:61017986-61018005 MsG0880045555.01.T01:CDS 55.0%
!! GATGAGAGAAGAAGCGCCAC+TGG - Chr8:61018055-61018074 None:intergenic 55.0%
!!! GCTTTTGCTCTGGGGTTACG+GGG - Chr8:61014561-61014580 None:intergenic 55.0%
CGGCGCCGTTGAGCAACTAA+TGG + Chr8:61013543-61013562 MsG0880045555.01.T01:CDS 60.0%
CTAATTCCCGGCGACGGGAT+CGG + Chr8:61013508-61013527 MsG0880045555.01.T01:CDS 60.0%
GATCCCGTCGCCGGGAATTA+GGG - Chr8:61013509-61013528 None:intergenic 60.0%
GGGATCGGACCACTCGTAAC+CGG + Chr8:61013523-61013542 MsG0880045555.01.T01:CDS 60.0%
CGATCCCGTCGCCGGGAATT+AGG - Chr8:61013510-61013529 None:intergenic 65.0%
! ACTGCGGCAGGCATTGCTGG+AGG + Chr8:61016597-61016616 MsG0880045555.01.T01:CDS 65.0%
! GCAGGCATTGCTGGAGGCAC+TGG + Chr8:61016603-61016622 MsG0880045555.01.T01:CDS 65.0%
! GGCACTGGAGTCATGCCAGG+AGG + Chr8:61016618-61016637 MsG0880045555.01.T01:CDS 65.0%
!! GGAGGCACTGGAGTCATGCC+AGG + Chr8:61016615-61016634 MsG0880045555.01.T01:CDS 65.0%
!! TCAACGGCGCCGGTTACGAG+TGG - Chr8:61013535-61013554 None:intergenic 65.0%
AGTGGTCCGATCCCGTCGCC+GGG - Chr8:61013517-61013536 None:intergenic 70.0%
GAGTGGTCCGATCCCGTCGC+CGG - Chr8:61013518-61013537 None:intergenic 70.0%
GTCGCCGGGACGGTGCATGT+AGG - Chr8:61013468-61013487 None:intergenic 70.0%
! CGGGACGGGGGGTTCGTCGC+CGG - Chr8:61013483-61013502 None:intergenic 80.0%
! CGGGGGGTTCGTCGCCGGGA+CGG - Chr8:61013478-61013497 None:intergenic 80.0%
! GGGACGGGGGGTTCGTCGCC+GGG - Chr8:61013482-61013501 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr8 gene 61013457 61018499 61013457 ID=MsG0880045555.01;Name=MsG0880045555.01
Chr8 mRNA 61013457 61018499 61013457 ID=MsG0880045555.01.T01;Parent=MsG0880045555.01;Name=MsG0880045555.01.T01;_AED=0.43;_eAED=0.48;_QI=0|0.33|0.5|1|1|1|4|265|305
Chr8 exon 61013457 61013942 61013457 ID=MsG0880045555.01.T01:exon:31043;Parent=MsG0880045555.01.T01
Chr8 exon 61014358 61014435 61014358 ID=MsG0880045555.01.T01:exon:31044;Parent=MsG0880045555.01.T01
Chr8 exon 61016561 61016639 61016561 ID=MsG0880045555.01.T01:exon:31045;Parent=MsG0880045555.01.T01
Chr8 exon 61017960 61018499 61017960 ID=MsG0880045555.01.T01:exon:31046;Parent=MsG0880045555.01.T01
Chr8 CDS 61013457 61013942 61013457 ID=MsG0880045555.01.T01:cds;Parent=MsG0880045555.01.T01
Chr8 CDS 61014358 61014435 61014358 ID=MsG0880045555.01.T01:cds;Parent=MsG0880045555.01.T01
Chr8 CDS 61016561 61016639 61016561 ID=MsG0880045555.01.T01:cds;Parent=MsG0880045555.01.T01
Chr8 CDS 61017960 61018234 61017960 ID=MsG0880045555.01.T01:cds;Parent=MsG0880045555.01.T01
Chr8 three_prime_UTR 61018235 61018499 61018235 ID=MsG0880045555.01.T01:three_prime_utr;Parent=MsG0880045555.01.T01
Gene Sequence

>MsG0880045555.01.T01

ATGCGTAACCTACATGCACCGTCCCGGCGACGAACCCCCCGTCCCGTAACCCTAATTCCCGGCGACGGGATCGGACCACTCGTAACCGGCGCCGTTGAGCAACTAATGGAAGCGATGCACGCGCCAGTTTACTTTGAGAAATTCGACGTACATGGTGACATGAAAGCTGTACCTACGGAAGTTCTTGAATCGATCCGTAAGAATAAGGTTTGTCTTAAAGGTGGATTGGTTACTCCTATGGGTGGTGGTGTTAGTTCGCTTAATGTTCAGTTGAGGAAAGAGCTTGATCTTTATGCTTCGCTTGTTAATTGTTTTAATCTTCCTGGGTTACCTACACGACATGATAACGTTGATATTGTAGTTATTAGGGAGAATACTGAAGGGAGTATGCTGGTCTTGAACATGAGGTTGTTCCCGGTGTCGTCGAAAGTCTTAAGGTATAATTTCTATCATTTCTTGTTTTATATTGATCGAGGAGAAAACATGGTTTGTGATTGCAATATGGGCCACAACATCACGACTTTTGATGTCTTTGCGACTGTAAGCGAAGCAATCATGAACGAGGTTACCCCAAATCTGTATGGAAATCTAGTTGCAAATACTGCGGCAGGCATTGCTGGAGGCACTGGAGTCATGCCAGGAGGTAATGTTGGTGCTGAGCATGCTGTGTTTGAGCAGGGTGCTTCAGCAGGAAATGTTGGTAATGAGAAAGTAGCTGCACAAAAGACAGCTAACCCAGTGGCGCTTCTTCTCTCATCAGCTATGATGCTTAGGCATCTCCAGTTTCCTGCATTTGCTGACCGTTTGGAAAATGCTGTTGAAAAAGTCATTCTAGAGGGCAAGTATCGGACAAAGGATCTTGGAGGGACAAGTACCACCCAAGAAGTTGTCGATGCAGTAATAGATGCTTTAGATTGA

Protein sequence

>MsG0880045555.01.T01

MRNLHAPSRRRTPRPVTLIPGDGIGPLVTGAVEQLMEAMHAPVYFEKFDVHGDMKAVPTEVLESIRKNKVCLKGGLVTPMGGGVSSLNVQLRKELDLYASLVNCFNLPGLPTRHDNVDIVVIRENTEGSMLVLNMRLFPVSSKVLRYNFYHFLFYIDRGENMVCDCNMGHNITTFDVFATVSEAIMNEVTPNLYGNLVANTAAGIAGGTGVMPGGNVGAEHAVFEQGASAGNVGNEKVAAQKTANPVALLLSSAMMLRHLQFPAFADRLENAVEKVILEGKYRTKDLGGTSTTQEVVDAVIDALD*