AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023999.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023999.01.T01 MTR_8g106820 96.774 620 11 1 1 620 1 611 0.0 1219
MsG0480023999.01.T01 MTR_1g107560 71.895 612 163 1 6 617 4 606 0.0 922
MsG0480023999.01.T01 MTR_1g054300 37.273 110 61 3 158 264 337 441 1.37e-12 70.9
MsG0480023999.01.T01 MTR_1g072140 22.989 348 211 13 179 520 16 312 8.54e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023999.01.T01 AT3G18060 73.906 617 151 2 4 619 1 608 0.0 951
MsG0480023999.01.T01 AT2G01330 66.343 618 195 5 5 619 3 610 0.0 855
MsG0480023999.01.T01 AT5G52820 27.888 251 120 11 68 276 209 440 3.46e-12 69.3
MsG0480023999.01.T01 AT5G52820 22.045 440 282 13 148 573 80 472 5.03e-11 65.9
MsG0480023999.01.T01 AT2G43770 26.174 298 199 10 58 348 52 335 7.89e-12 67.4
MsG0480023999.01.T01 AT5G67320 23.967 242 161 8 52 284 358 585 2.02e-11 67.4
MsG0480023999.01.T01 AT4G02730 24.138 348 203 12 51 392 35 327 7.41e-11 64.3

Find 189 sgRNAs with CRISPR-Local

Find 454 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTCACTTAGGTGGGGTTTA+TGG 0.082114 4:-92210641 MsG0480023999.01.T01:CDS
AAGGAGTTTCGTGTTCTTTC+TGG 0.134342 4:-92216703 MsG0480023999.01.T01:CDS
CTGCACATATATTCTATTTC+TGG 0.164431 4:-92211286 MsG0480023999.01.T01:CDS
ACCTAAGTGAGCACCCTTTA+TGG 0.179066 4:+92210652 None:intergenic
AATCCCTGATGTTCTCATTT+TGG 0.185647 4:-92210146 MsG0480023999.01.T01:three_prime_UTR
CTCACTTAGGTGGGGTTTAT+GGG 0.206529 4:-92210640 MsG0480023999.01.T01:CDS
AACCGTTAGTTCTGACAAAA+AGG 0.227495 4:-92214015 MsG0480023999.01.T01:CDS
GTTCTAGTTTCAATTGATTC+AGG 0.254254 4:-92211427 MsG0480023999.01.T01:CDS
GCAATGGATAGGTGGGATTC+TGG 0.264908 4:-92216022 MsG0480023999.01.T01:intron
GTAGCAATCCTACTGCTATC+AGG 0.285417 4:+92210737 None:intergenic
CTGACAAGTCTGCAAAAGTA+TGG 0.313171 4:-92212727 MsG0480023999.01.T01:CDS
CCCCTTCATGTCTCCGTCTA+TGG 0.323756 4:-92216844 MsG0480023999.01.T01:CDS
ACCATCCTGACCACCAATAA+TGG 0.326504 4:+92211312 None:intergenic
TGTCAGGTACCGTGAGGATC+TGG 0.337070 4:-92216753 MsG0480023999.01.T01:CDS
GTTGTGTCAATCATTAATCT+TGG 0.338589 4:-92211379 MsG0480023999.01.T01:CDS
GTAGGTGATGGTGTTGGATT+TGG 0.348835 4:+92216906 None:intergenic
ATTCACTGATGAATATAGTT+TGG 0.351324 4:-92210612 MsG0480023999.01.T01:CDS
GAAAATCGAGCGACGGTGGC+AGG 0.372098 4:+92216808 None:intergenic
CAGCATAAATACTGCCAGTA+TGG 0.381490 4:+92213934 None:intergenic
ATCAAGTTGTAAAGGGAAAG+TGG 0.385370 4:-92210534 MsG0480023999.01.T01:three_prime_UTR
GGCTAATAGAAATACCATAA+AGG 0.390095 4:-92210666 MsG0480023999.01.T01:CDS
GAAACATCCCCTCTCTAACT+TGG 0.396563 4:+92210426 None:intergenic
TATCTTGTCACTGTTTCTCT+TGG 0.401428 4:-92212602 MsG0480023999.01.T01:CDS
TTGATTCCCTGTAATGTACT+TGG 0.404674 4:+92210182 None:intergenic
GTTACTTCTGAGAATGGTTA+AGG 0.405078 4:+92212499 None:intergenic
CTTGTCACTGTTTCTCTTGG+TGG 0.406048 4:-92212599 MsG0480023999.01.T01:CDS
GAAGAAGAGATTGTTATGTC+TGG 0.410474 4:-92212356 MsG0480023999.01.T01:CDS
AAAACCAAAATGAGAACATC+AGG 0.412648 4:+92210142 None:intergenic
TCTTCTGAAGGTGGCCATAC+TGG 0.414349 4:-92213948 MsG0480023999.01.T01:CDS
ATTGAAACTAGAACAAGTTC+AGG 0.414746 4:+92211436 None:intergenic
GCTAATAGAAATACCATAAA+GGG 0.416716 4:-92210665 MsG0480023999.01.T01:CDS
TAATCGAGAAGCTGTTGTTT+GGG 0.419514 4:-92211164 MsG0480023999.01.T01:CDS
GCGACTTGCAAGCTTCTGTT+TGG 0.420696 4:-92210341 MsG0480023999.01.T01:three_prime_UTR
TTAATCGAGAAGCTGTTGTT+TGG 0.423105 4:-92211165 MsG0480023999.01.T01:CDS
ACATTGATTTGTTCTGCCTC+TGG 0.424474 4:-92212668 MsG0480023999.01.T01:CDS
ACAATGCGAAAAGGCCTTGT+AGG 0.425304 4:+92215941 None:intergenic
GATGCTGAAGCCATTGATAT+CGG 0.426975 4:-92211496 MsG0480023999.01.T01:CDS
TTTCAAAATGTAGACTACTA+TGG 0.427064 4:-92210259 MsG0480023999.01.T01:three_prime_UTR
CTCCTGTCTTGTAGTTATGA+TGG 0.428145 4:-92212467 MsG0480023999.01.T01:CDS
CTATTGATTGTGCGATATGA+AGG 0.430370 4:-92210312 MsG0480023999.01.T01:three_prime_UTR
GACAATTTATCCGTGCAGTA+TGG 0.435214 4:+92210771 None:intergenic
CAATGGATAGGTGGGATTCT+GGG 0.435336 4:-92216021 MsG0480023999.01.T01:intron
CTCTTCTTCTGCAGCTGCTA+AGG 0.435458 4:+92212370 None:intergenic
CTACAAGACAGGAGCACTCT+AGG 0.437677 4:+92212476 None:intergenic
GATGAGCTCGGTGGAGTTGA+CGG 0.438057 4:-92216989 MsG0480023999.01.T01:CDS
CGAGATTGCTTAAATCTAAA+GGG 0.439758 4:+92215875 None:intergenic
GGTATCAGAATTGTCGCTTC+TGG 0.440339 4:-92216649 MsG0480023999.01.T01:CDS
CACGGATAAATTGTCTTGCT+TGG 0.442191 4:-92210763 MsG0480023999.01.T01:CDS
TGAAGCCATTATTGGTGGTC+AGG 0.444420 4:-92211317 MsG0480023999.01.T01:CDS
TACAAACAGTTATATCAATC+TGG 0.445143 4:+92210117 None:intergenic
CCTTTACAACTTGATCTTCA+CGG 0.445771 4:+92210542 None:intergenic
AGTGCAACACTAAAATCCTT+TGG 0.445789 4:+92211466 None:intergenic
TAGATATTTGTGAGCGAAAG+TGG 0.446254 4:-92217153 MsG0480023999.01.T01:five_prime_UTR
GTTACAAATTTACTGCCATC+TGG 0.447597 4:+92214035 None:intergenic
GATGGAAGTGAAGCCATTAT+TGG 0.448281 4:-92211325 MsG0480023999.01.T01:CDS
TATGTCCTGAAAACGATGTC+GGG 0.452600 4:+92212537 None:intergenic
TTAATAGTTAAGTGGATTCA+AGG 0.455728 4:-92212443 MsG0480023999.01.T01:CDS
TTGTCACTGTTTCTCTTGGT+GGG 0.456402 4:-92212598 MsG0480023999.01.T01:CDS
TCATGTTACTCTGAAACTTA+CGG 0.456783 4:+92209969 None:intergenic
AAACATCCCCTCTCTAACTT+GGG 0.457062 4:+92210427 None:intergenic
GCGAGATTGCTTAAATCTAA+AGG 0.459551 4:+92215874 None:intergenic
GTTAAGTGGATTCAAGGGAT+TGG 0.468346 4:-92212437 MsG0480023999.01.T01:CDS
GTCAGGTACCGTGAGGATCT+GGG 0.468616 4:-92216752 MsG0480023999.01.T01:CDS
CGTGAAGATCAAGTTGTAAA+GGG 0.468706 4:-92210541 MsG0480023999.01.T01:exon
GAATATAGTTTGGTTAGCTC+AGG 0.471315 4:-92210602 MsG0480023999.01.T01:CDS
ACTAATGTTGGTGAATTTGA+TGG 0.472283 4:-92215998 MsG0480023999.01.T01:CDS
CGCCATAGACGGAGACATGA+AGG 0.472952 4:+92216842 None:intergenic
TAATCTTGGATTTACTGTTA+CGG 0.474705 4:-92211365 MsG0480023999.01.T01:CDS
CCACGGCCACGTTCTGTTGA+AGG 0.475561 4:+92216949 None:intergenic
ATAAGGCGGGTTTCTTTACA+TGG 0.476069 4:-92211532 MsG0480023999.01.T01:CDS
GCATCTGTTGTCTCGTCTGA+TGG 0.480001 4:-92211343 MsG0480023999.01.T01:CDS
GCAGTATTTATGCTGTTAGC+TGG 0.481308 4:-92213926 MsG0480023999.01.T01:CDS
ATCATATTCGATGGAAAGAC+TGG 0.482024 4:-92213990 MsG0480023999.01.T01:CDS
GACATATCTGAGGATAATAG+TGG 0.491671 4:-92212704 MsG0480023999.01.T01:CDS
TTGATTTGTTCTGCCTCTGG+TGG 0.491775 4:-92212665 MsG0480023999.01.T01:CDS
GGAGTTGAAGACATGCTTGT+AGG 0.493315 4:-92212644 MsG0480023999.01.T01:CDS
ATTCATCATGATAACCGATC+TGG 0.494504 4:+92216876 None:intergenic
CCGTGAAGATCAAGTTGTAA+AGG 0.495196 4:-92210542 MsG0480023999.01.T01:exon
AGACTGTCCTTGAGAAACAT+AGG 0.495310 4:-92211246 MsG0480023999.01.T01:CDS
GTTGCATCTGCTGACGTGTC+AGG 0.496526 4:-92216769 MsG0480023999.01.T01:CDS
GCCATTATTGGTGGTCAGGA+TGG 0.505715 4:-92211313 MsG0480023999.01.T01:CDS
TCTAGGGTTACTTCTGAGAA+TGG 0.505822 4:+92212493 None:intergenic
ATGATGGCTTAATAGTTAAG+TGG 0.506182 4:-92212451 MsG0480023999.01.T01:CDS
GATGCAACCCATTCACCGTT+GGG 0.506443 4:+92216784 None:intergenic
ACGTTCTGTTGAAGGCGTGC+AGG 0.508737 4:+92216957 None:intergenic
CTTGGTCCCCTGATAGCAGT+AGG 0.509910 4:-92210745 MsG0480023999.01.T01:CDS
TAGCAATCCTACTGCTATCA+GGG 0.510406 4:+92210738 None:intergenic
ATGGTATTTCTATTAGCCAC+AGG 0.512733 4:+92210671 None:intergenic
CATGATAACCGATCTGGCAT+TGG 0.515012 4:+92216882 None:intergenic
CCACAGGTGACAATGCGAAA+AGG 0.517474 4:+92215932 None:intergenic
TCAAGTTGTAAAGGGAAAGT+GGG 0.517637 4:-92210533 MsG0480023999.01.T01:three_prime_UTR
GGCCGTGGTATTCTCATCTC+CGG 0.518010 4:-92216934 MsG0480023999.01.T01:CDS
GTCGCTTCTGGTGAAGCTAA+AGG 0.520427 4:-92216637 MsG0480023999.01.T01:CDS
TGGTTGACTTCCGATATCAA+TGG 0.521473 4:+92211486 None:intergenic
GACTGTCCTTGAGAAACATA+GGG 0.523830 4:-92211245 MsG0480023999.01.T01:CDS
TCTCTCTTTCAAGATGAGCT+CGG 0.527575 4:-92217001 MsG0480023999.01.T01:exon
TAAAGGGTGCTCACTTAGGT+GGG 0.536033 4:-92210649 MsG0480023999.01.T01:CDS
TTCTGTCAACTAGATAAGGC+GGG 0.537021 4:-92211545 MsG0480023999.01.T01:intron
AGATGCAACCCATTCACCGT+TGG 0.537671 4:+92216783 None:intergenic
GAGTTGAAGACATGCTTGTA+GGG 0.539058 4:-92212643 MsG0480023999.01.T01:CDS
GCGACAATTCTGATACCATC+AGG 0.539289 4:+92216655 None:intergenic
AAAAGTCAAAACTGATGAAG+AGG 0.539438 4:-92210464 MsG0480023999.01.T01:three_prime_UTR
GATAGCAGTAGGATTGCTAC+AGG 0.543234 4:-92210734 MsG0480023999.01.T01:CDS
TAGTACTAGTACTCACATCT+CGG 0.543518 4:+92211131 None:intergenic
TACAAGACAGGAGCACTCTA+GGG 0.546231 4:+92212477 None:intergenic
TACTCACATCTCGGGAGGCA+CGG 0.546800 4:+92211140 None:intergenic
GCTGTTAGCTGGAGTCCTGA+TGG 0.548585 4:-92213915 MsG0480023999.01.T01:CDS
AGTACTAGTACTCACATCTC+GGG 0.551436 4:+92211132 None:intergenic
TAGCGGTAAATTACAAAGGA+AGG 0.551726 4:-92212411 MsG0480023999.01.T01:CDS
AGCCATCATAACTACAAGAC+AGG 0.557501 4:+92212465 None:intergenic
GTAAGCATGTTCGCCATAGA+CGG 0.558880 4:+92216831 None:intergenic
CACCTACACCAATGCCAGAT+CGG 0.562580 4:-92216890 MsG0480023999.01.T01:CDS
ACCATAAAGGGTGCTCACTT+AGG 0.564151 4:-92210653 MsG0480023999.01.T01:CDS
ATTGGTGTAGGTGATGGTGT+TGG 0.567354 4:+92216900 None:intergenic
ATAAAGGGTGCTCACTTAGG+TGG 0.568101 4:-92210650 MsG0480023999.01.T01:CDS
GGTGTTGGATTTGGAGTCGC+CGG 0.568267 4:+92216915 None:intergenic
TGGGATTCTGGGACTAATGT+TGG 0.568712 4:-92216010 MsG0480023999.01.T01:CDS
TCGCATTGTCACCTGTGGAG+AGG 0.571600 4:-92215927 MsG0480023999.01.T01:CDS
TAATAGTTAAGTGGATTCAA+GGG 0.572072 4:-92212442 MsG0480023999.01.T01:CDS
ATATGTCCTGAAAACGATGT+CGG 0.572109 4:+92212536 None:intergenic
CCTTCAACAGAACGTGGCCG+TGG 0.572710 4:-92216949 MsG0480023999.01.T01:CDS
CAAGATAATCGTTCAACCAC+AGG 0.574023 4:+92212618 None:intergenic
GACAAGAAAATCCTCTCCAC+AGG 0.576600 4:+92215916 None:intergenic
ATCGGTGAGTTATCTTCTGA+AGG 0.580609 4:-92213960 MsG0480023999.01.T01:CDS
AACTCAAAACTCGTCTTGAG+TGG 0.584201 4:+92215975 None:intergenic
CTTATCACCCCAAGTTAGAG+AGG 0.584499 4:-92210435 MsG0480023999.01.T01:three_prime_UTR
GATCTTCAGTGGTCTCCTGA+TGG 0.585210 4:-92216670 MsG0480023999.01.T01:CDS
TACAACTTGATCTTCACGGA+GGG 0.586215 4:+92210546 None:intergenic
AGATATTTGTGAGCGAAAGT+GGG 0.589120 4:-92217152 MsG0480023999.01.T01:five_prime_UTR
ACATGCTTGTAGGGTGCCTG+TGG 0.597201 4:-92212634 MsG0480023999.01.T01:CDS
TGACAAGTCTGCAAAAGTAT+GGG 0.598045 4:-92212726 MsG0480023999.01.T01:CDS
AGTTTCGTGTTCTTTCTGGA+AGG 0.598240 4:-92216699 MsG0480023999.01.T01:CDS
GCCATAGACGGAGACATGAA+GGG 0.598923 4:+92216843 None:intergenic
AAAATCGAGCGACGGTGGCA+GGG 0.599251 4:+92216809 None:intergenic
GGAAAGACTGGAGAGAAGAT+CGG 0.599432 4:-92213978 MsG0480023999.01.T01:CDS
CTTCTGTCAACTAGATAAGG+CGG 0.601647 4:-92211546 MsG0480023999.01.T01:intron
AATGCAGTGCACGATGATGA+TGG 0.604966 4:+92217025 None:intergenic
ATCTGAGGATAATAGTGGGA+AGG 0.606291 4:-92212699 MsG0480023999.01.T01:CDS
CTCTTTCAAGATGAGCTCGG+TGG 0.606493 4:-92216998 MsG0480023999.01.T01:exon
TTGTTTGTTCATATATCACA+AGG 0.607911 4:-92210373 MsG0480023999.01.T01:three_prime_UTR
TATTTCTATTAGCCACAGGT+TGG 0.608800 4:+92210675 None:intergenic
AAAGGGTGCTCACTTAGGTG+GGG 0.609702 4:-92210648 MsG0480023999.01.T01:CDS
ACAACTTGATCTTCACGGAG+GGG 0.609851 4:+92210547 None:intergenic
TAGCACCCCTATGTTTCTCA+AGG 0.610582 4:+92211239 None:intergenic
AAGGCGGGTTTCTTTACATG+GGG 0.611641 4:-92211530 MsG0480023999.01.T01:CDS
AAAGTCAAAACTGATGAAGA+GGG 0.615257 4:-92210463 MsG0480023999.01.T01:three_prime_UTR
TCTGGCATTGGTGTAGGTGA+TGG 0.618379 4:+92216894 None:intergenic
GATATAGCGGTAAATTACAA+AGG 0.618475 4:-92212415 MsG0480023999.01.T01:CDS
TAAGGCGGGTTTCTTTACAT+GGG 0.618983 4:-92211531 MsG0480023999.01.T01:CDS
TGTGTGAGATATTCTCCAGA+TGG 0.622541 4:-92214050 MsG0480023999.01.T01:CDS
TAGTTTGGTTAGCTCAGGCG+AGG 0.625931 4:-92210597 MsG0480023999.01.T01:CDS
GGGTGAAAATCGAGCGACGG+TGG 0.626749 4:+92216804 None:intergenic
AACATCCCCTCTCTAACTTG+GGG 0.627088 4:+92210428 None:intergenic
TCAGGTACCGTGAGGATCTG+GGG 0.627630 4:-92216751 MsG0480023999.01.T01:CDS
TTAGATTTAAGCAATCTCGC+AGG 0.628883 4:-92215871 MsG0480023999.01.T01:intron
ACTTCTGAGAATGGTTAAGG+AGG 0.628997 4:+92212502 None:intergenic
GTTGTGCTTATAAACCTACA+AGG 0.629807 4:-92215955 MsG0480023999.01.T01:CDS
CCATAGACGGAGACATGAAG+GGG 0.633505 4:+92216844 None:intergenic
ACATATCTGAGGATAATAGT+GGG 0.634727 4:-92212703 MsG0480023999.01.T01:CDS
GAAGGATCGATGATCTTCAG+TGG 0.639646 4:-92216681 MsG0480023999.01.T01:CDS
ATACATAAAAGCGCGAACAA+AGG 0.644313 4:+92216609 None:intergenic
TTATCACCCCAAGTTAGAGA+GGG 0.646189 4:-92210434 MsG0480023999.01.T01:three_prime_UTR
TGATATCGGAAGTCAACCAA+AGG 0.651151 4:-92211482 MsG0480023999.01.T01:CDS
ATGTCCTGAAAACGATGTCG+GGG 0.652427 4:+92212538 None:intergenic
CATGTCTTCAACTCCACCAG+AGG 0.652652 4:+92212652 None:intergenic
GCGAGTTCCCCAGATCCTCA+CGG 0.657058 4:+92216744 None:intergenic
AAAAGTATGGGACATATCTG+AGG 0.658576 4:-92212714 MsG0480023999.01.T01:CDS
GGTGAGTTATCTTCTGAAGG+TGG 0.661525 4:-92213957 MsG0480023999.01.T01:CDS
GGAAGTGAAGCCATTATTGG+TGG 0.661612 4:-92211322 MsG0480023999.01.T01:CDS
ACATGCTGTACCATACTGCA+CGG 0.663929 4:-92210781 MsG0480023999.01.T01:CDS
AACCGATCTGGCATTGGTGT+AGG 0.664335 4:+92216888 None:intergenic
TGCACGCCTTCAACAGAACG+TGG 0.678162 4:-92216955 MsG0480023999.01.T01:CDS
TCTTTACATGGGGATCAGTG+CGG 0.680969 4:-92211520 MsG0480023999.01.T01:CDS
GTGCACGATGATGATGGTGA+TGG 0.685538 4:+92217031 None:intergenic
TATCACCCCAAGTTAGAGAG+GGG 0.694883 4:-92210433 MsG0480023999.01.T01:three_prime_UTR
AAACCAAAATGAGAACATCA+GGG 0.695207 4:+92210143 None:intergenic
ATATGAGATTGACCAACCTG+TGG 0.696248 4:-92210687 MsG0480023999.01.T01:CDS
TCAGGAGTTGTCATGCTGCG+TGG 0.701235 4:-92211409 MsG0480023999.01.T01:CDS
ATTCAAGGGATTGGATATAG+CGG 0.701405 4:-92212428 MsG0480023999.01.T01:CDS
GTTGGGTGAAAATCGAGCGA+CGG 0.702331 4:+92216801 None:intergenic
GATTGCTTAAATCTAAAGGG+AGG 0.704673 4:+92215878 None:intergenic
ACTAGTACTCACATCTCGGG+AGG 0.705295 4:+92211135 None:intergenic
GAGGGGTTATCTTCCAGACA+CGG 0.708079 4:+92210564 None:intergenic
CTGACGTGTCAGGTACCGTG+AGG 0.722749 4:-92216759 MsG0480023999.01.T01:CDS
AGCAATCCTACTGCTATCAG+GGG 0.726822 4:+92210739 None:intergenic
ACTGTCCTTGAGAAACATAG+GGG 0.726823 4:-92211244 MsG0480023999.01.T01:CDS
CGCCGGAGATGAGAATACCA+CGG 0.738636 4:+92216932 None:intergenic
TTACAACTTGATCTTCACGG+AGG 0.742051 4:+92210545 None:intergenic
CATAGACGGAGACATGAAGG+GGG 0.769626 4:+92216845 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAATGAAATTAATTATATT+GGG + Chr4:92215307-92215326 None:intergenic 10.0%
!! TCAAATGAAATTAATTATAT+TGG + Chr4:92215308-92215327 None:intergenic 10.0%
!!! AACTAAGTATAAATTTTATT+TGG - Chr4:92217113-92217132 MsG0480023999.01.T01:five_prime_UTR 10.0%
!!! ATAATACTTTTGTTATTTAA+AGG + Chr4:92216248-92216267 None:intergenic 10.0%
!!! TATATATATATATTTAGGAT+AGG - Chr4:92210632-92210651 MsG0480023999.01.T01:CDS 10.0%
!!! TTGATTTTAAAATTTCAAAT+AGG + Chr4:92213753-92213772 None:intergenic 10.0%
!! ATCAAGAAAAAAATTAGAAT+TGG - Chr4:92212031-92212050 MsG0480023999.01.T01:intron 15.0%
!!! AAATTAATCAGTTAGTTTTA+TGG + Chr4:92212251-92212270 None:intergenic 15.0%
!!! AATTTATACTTAGTTTTGTT+TGG + Chr4:92217108-92217127 None:intergenic 15.0%
!!! ATGTTATAACTTGTTTTTAT+AGG - Chr4:92210914-92210933 MsG0480023999.01.T01:intron 15.0%
!!! GATAAAACATAAAAAGTATA+TGG + Chr4:92211560-92211579 None:intergenic 15.0%
!!! GTATTAATTAATTTTAAGTG+AGG + Chr4:92212795-92212814 None:intergenic 15.0%
!!! TAATTAGACACATATTTTTA+AGG + Chr4:92211507-92211526 None:intergenic 15.0%
!!! TGAGTATTTTTTATTGATTA+TGG - Chr4:92213274-92213293 MsG0480023999.01.T01:intron 15.0%
!!! TGGTTTTATAAATTATAGAT+AGG + Chr4:92211892-92211911 None:intergenic 15.0%
!!! TTTTGCAATTAAAATGAAAA+AGG - Chr4:92216199-92216218 MsG0480023999.01.T01:intron 15.0%
!! AAGAAAAGAAAAGAAAAGAA+AGG + Chr4:92210573-92210592 None:intergenic 20.0%
!! AATAAGTGTTTATACATGAT+AGG + Chr4:92210799-92210818 None:intergenic 20.0%
!! AATTAAATCAACTAAGTTGT+TGG + Chr4:92211936-92211955 None:intergenic 20.0%
!! AATTACTACTGCTTATTTAA+TGG + Chr4:92215065-92215084 None:intergenic 20.0%
!! ACACTATCTTTAAACATAAA+GGG + Chr4:92212945-92212964 None:intergenic 20.0%
!! ACTATAAACTAAGAAATATG+TGG - Chr4:92213408-92213427 MsG0480023999.01.T01:intron 20.0%
!! AGAATAATAAATCTCATTCA+AGG - Chr4:92214097-92214116 MsG0480023999.01.T01:intron 20.0%
!! ATATTATAAGTTAGCAATTG+AGG - Chr4:92215413-92215432 MsG0480023999.01.T01:intron 20.0%
!! ATTACTACTGCTTATTTAAT+GGG + Chr4:92215064-92215083 None:intergenic 20.0%
!! ATTGCTAACTTATAATATCT+TGG + Chr4:92215411-92215430 None:intergenic 20.0%
!! GTGCAAATCTATATAAAATA+TGG - Chr4:92211973-92211992 MsG0480023999.01.T01:intron 20.0%
!! TAAATGAGAATATTGATCTT+TGG + Chr4:92212057-92212076 None:intergenic 20.0%
!! TACACTATCTTTAAACATAA+AGG + Chr4:92212946-92212965 None:intergenic 20.0%
!! TGAGATTTATTATTCTACAT+TGG + Chr4:92214093-92214112 None:intergenic 20.0%
!! TGTTATCTATTGAAGTATAT+TGG - Chr4:92214992-92215011 MsG0480023999.01.T01:intron 20.0%
!! TTGATATATTACAAAATCTG+TGG + Chr4:92212016-92212035 None:intergenic 20.0%
!! TTGCTAACTTATAATATCTT+GGG + Chr4:92215410-92215429 None:intergenic 20.0%
!! TTTGTTTATCCAAATCAAAT+TGG + Chr4:92214904-92214923 None:intergenic 20.0%
!!! AAGACATTTTTCTTTATAGA+AGG + Chr4:92211582-92211601 None:intergenic 20.0%
!!! ACGATAATTTGTTTATGTAT+AGG - Chr4:92213052-92213071 MsG0480023999.01.T01:intron 20.0%
!!! ATGTTTGAGTGAATATTTTT+TGG - Chr4:92211035-92211054 MsG0480023999.01.T01:intron 20.0%
!!! ATTTTTAAATTATGCTCACT+TGG + Chr4:92212279-92212298 None:intergenic 20.0%
!!! CGATAATTTGTTTATGTATA+GGG - Chr4:92213053-92213072 MsG0480023999.01.T01:intron 20.0%
!!! GATGAAATAAATCATTTTCT+CGG - Chr4:92214969-92214988 MsG0480023999.01.T01:intron 20.0%
!!! TATTTTTTATTGATTATGGC+AGG - Chr4:92213278-92213297 MsG0480023999.01.T01:intron 20.0%
!!! TTCATTTTAATTGCAAAACT+GGG + Chr4:92216197-92216216 None:intergenic 20.0%
!!! TTCTCATTTATTTTATAGCA+AGG - Chr4:92212067-92212086 MsG0480023999.01.T01:intron 20.0%
!!! TTGCAGATATTTTTAAAATG+TGG + Chr4:92212858-92212877 None:intergenic 20.0%
!!! TTTCATTTTAATTGCAAAAC+TGG + Chr4:92216198-92216217 None:intergenic 20.0%
! AAGCATCAAAATCAGATATA+GGG + Chr4:92211006-92211025 None:intergenic 25.0%
! ACTAAAACTCTCCAATATAT+GGG + Chr4:92214070-92214089 None:intergenic 25.0%
! ACTTGAATCATACATAAAGT+TGG + Chr4:92212093-92212112 None:intergenic 25.0%
! ATAATAAATCTCATTCAAGG+TGG - Chr4:92214100-92214119 MsG0480023999.01.T01:intron 25.0%
! ATCAACATCATAGATTGAAA+AGG + Chr4:92213352-92213371 None:intergenic 25.0%
! ATGTACTTGGAAAAATTCTT+TGG + Chr4:92216954-92216973 None:intergenic 25.0%
! ATTCACTGATGAATATAGTT+TGG - Chr4:92216534-92216553 MsG0480023999.01.T01:intron 25.0%
! ATTTATCAGACGAATGTAAT+AGG + Chr4:92213022-92213041 None:intergenic 25.0%
! CACACTTCAAAAATCAAAAT+TGG + Chr4:92212490-92212509 None:intergenic 25.0%
! CGAAAATCGTTTATAACTAA+TGG - Chr4:92215546-92215565 MsG0480023999.01.T01:intron 25.0%
! CTTTAAACATAAAGGGAAAA+GGG + Chr4:92212938-92212957 None:intergenic 25.0%
! CTTTCATTTACAACTAATCA+TGG - Chr4:92210703-92210722 MsG0480023999.01.T01:CDS 25.0%
! GAAATATGTGGTAAAGTAAA+AGG - Chr4:92213420-92213439 MsG0480023999.01.T01:intron 25.0%
! GAGAAATGTTTCGTATTAAT+TGG + Chr4:92215331-92215350 None:intergenic 25.0%
! GCTAATAGAAATACCATAAA+GGG - Chr4:92216481-92216500 MsG0480023999.01.T01:intron 25.0%
! GGAAATACAAAAATACTAAC+CGG - Chr4:92212679-92212698 MsG0480023999.01.T01:CDS 25.0%
! TAATAAATCTCATTCAAGGT+GGG - Chr4:92214101-92214120 MsG0480023999.01.T01:intron 25.0%
! TAATCTTGGATTTACTGTTA+CGG - Chr4:92215781-92215800 MsG0480023999.01.T01:intron 25.0%
! TAATGAGAATTCAGTATTTG+CGG + Chr4:92211748-92211767 None:intergenic 25.0%
! TACAAACAGTTATATCAATC+TGG + Chr4:92217032-92217051 None:intergenic 25.0%
! TAGAAAAGTGAATATAAGTC+AGG + Chr4:92213624-92213643 None:intergenic 25.0%
! TATATGTTCTTGAACAAAAC+CGG + Chr4:92216049-92216068 None:intergenic 25.0%
! TCTTTAAACATAAAGGGAAA+AGG + Chr4:92212939-92212958 None:intergenic 25.0%
! TGATTTGAATGAATGATTCA+TGG + Chr4:92212317-92212336 None:intergenic 25.0%
! TGCTTTCAAATATTACAAAC+AGG - Chr4:92216151-92216170 MsG0480023999.01.T01:intron 25.0%
! TTGTTTGTTCATATATCACA+AGG - Chr4:92216773-92216792 MsG0480023999.01.T01:CDS 25.0%
! TTTAAACATAAAGGGAAAAG+GGG + Chr4:92212937-92212956 None:intergenic 25.0%
! TTTCAAAATGTAGACTACTA+TGG - Chr4:92216887-92216906 MsG0480023999.01.T01:CDS 25.0%
! TTTCATATATGTTATTGTGC+AGG - Chr4:92216330-92216349 MsG0480023999.01.T01:intron 25.0%
!! AAAGCATCAAAATCAGATAT+AGG + Chr4:92211007-92211026 None:intergenic 25.0%
!! AATTTTTCCAAGTACATTAC+AGG - Chr4:92216957-92216976 MsG0480023999.01.T01:CDS 25.0%
!! ATGGCAATATGCAAAATTTT+GGG + Chr4:92211541-92211560 None:intergenic 25.0%
!! ATTTAATTTCGATACTCTGT+TGG + Chr4:92215176-92215195 None:intergenic 25.0%
!! ATTTTTCCAAGTACATTACA+GGG - Chr4:92216958-92216977 MsG0480023999.01.T01:CDS 25.0%
!! CATCTAGATAAACTATTTTC+AGG + Chr4:92210897-92210916 None:intergenic 25.0%
!! TAATAGTTAAGTGGATTCAA+GGG - Chr4:92214704-92214723 MsG0480023999.01.T01:intron 25.0%
!! TATGGCAATATGCAAAATTT+TGG + Chr4:92211542-92211561 None:intergenic 25.0%
!! TTAATAGTTAAGTGGATTCA+AGG - Chr4:92214703-92214722 MsG0480023999.01.T01:intron 25.0%
!! TTGATGAATTTTCAAAACAC+TGG - Chr4:92211604-92211623 MsG0480023999.01.T01:intron 25.0%
!! TTTCTTGTCAACTTTTATGA+AGG - Chr4:92211244-92211263 MsG0480023999.01.T01:CDS 25.0%
!!! ATATTTTTAAGGACATGCAA+GGG + Chr4:92211496-92211515 None:intergenic 25.0%
!!! ATTTTTCAATGTTTGCATCA+GGG - Chr4:92215954-92215973 MsG0480023999.01.T01:CDS 25.0%
!!! GAGAATTCTTCACTTTTTTT+GGG - Chr4:92213906-92213925 MsG0480023999.01.T01:intron 25.0%
!!! GTCACAACAATATTAGTTTT+TGG + Chr4:92215272-92215291 None:intergenic 25.0%
!!! TATGTCTGGTTTTGATAATA+AGG - Chr4:92214804-92214823 MsG0480023999.01.T01:intron 25.0%
!!! TCATTTTAACTTGTAGGTTA+TGG - Chr4:92213655-92213674 MsG0480023999.01.T01:intron 25.0%
!!! TTAGATTTTGTTTGAGAGTT+TGG + Chr4:92214194-92214213 None:intergenic 25.0%
!!! TTGCGGATATTTTTAAAATG+TGG + Chr4:92211731-92211750 None:intergenic 25.0%
AAAAATTCTTTGGACAACTC+TGG + Chr4:92216944-92216963 None:intergenic 30.0%
AAAACCAAAATGAGAACATC+AGG + Chr4:92217007-92217026 None:intergenic 30.0%
AAAAGTCAAAACTGATGAAG+AGG - Chr4:92216682-92216701 MsG0480023999.01.T01:CDS 30.0%
AAACCAAAATGAGAACATCA+GGG + Chr4:92217006-92217025 None:intergenic 30.0%
AAAGTCAAAACTGATGAAGA+GGG - Chr4:92216683-92216702 MsG0480023999.01.T01:CDS 30.0%
AAATGACTAGTATAGCAAAG+GGG + Chr4:92214317-92214336 None:intergenic 30.0%
AATAAATCTCATTCAAGGTG+GGG - Chr4:92214102-92214121 MsG0480023999.01.T01:intron 30.0%
AATCAGATATAGGGAATGTT+TGG + Chr4:92210997-92211016 None:intergenic 30.0%
ACATATCTGAGGATAATAGT+GGG - Chr4:92214443-92214462 MsG0480023999.01.T01:intron 30.0%
ACGAAACATTTCTCTCTATA+CGG - Chr4:92215337-92215356 MsG0480023999.01.T01:intron 30.0%
ACGATCTAGTAAAGAGAAAA+GGG + Chr4:92211811-92211830 None:intergenic 30.0%
ACTACTCACAACAAGAAAAA+TGG + Chr4:92216860-92216879 None:intergenic 30.0%
AGAAATGACTAGTATAGCAA+AGG + Chr4:92214319-92214338 None:intergenic 30.0%
AGAGACAAATACGTGAAAAT+GGG + Chr4:92213321-92213340 None:intergenic 30.0%
ATAACAAAAGACACACACAT+AGG - Chr4:92212380-92212399 MsG0480023999.01.T01:CDS 30.0%
ATAAGAACAAACCAAAACAG+AGG + Chr4:92212984-92213003 None:intergenic 30.0%
ATAATATCTTGGGACTAAGA+AGG + Chr4:92215400-92215419 None:intergenic 30.0%
ATAGAAGTTATTCGAGCTAA+GGG - Chr4:92213518-92213537 MsG0480023999.01.T01:intron 30.0%
ATATTTAGCAATTAGTGTGC+GGG - Chr4:92215498-92215517 MsG0480023999.01.T01:intron 30.0%
ATCATAGATTGAAAAGGAGA+TGG + Chr4:92213346-92213365 None:intergenic 30.0%
ATGATGGCTTAATAGTTAAG+TGG - Chr4:92214695-92214714 MsG0480023999.01.T01:intron 30.0%
ATTGAAACTAGAACAAGTTC+AGG + Chr4:92215713-92215732 None:intergenic 30.0%
CATTCATTACTAGATGAGTT+TGG - Chr4:92215245-92215264 MsG0480023999.01.T01:intron 30.0%
CCAAATCAAATTGGAGAAAA+TGG + Chr4:92214895-92214914 None:intergenic 30.0%
CGAGATTGCTTAAATCTAAA+GGG + Chr4:92211274-92211293 None:intergenic 30.0%
CTATATCGTACTTCTTTAGT+TGG - Chr4:92211077-92211096 MsG0480023999.01.T01:intron 30.0%
CTGCACATATATTCTATTTC+TGG - Chr4:92215860-92215879 MsG0480023999.01.T01:intron 30.0%
GAAATGACTAGTATAGCAAA+GGG + Chr4:92214318-92214337 None:intergenic 30.0%
GACTAAAACTCTCCAATATA+TGG + Chr4:92214071-92214090 None:intergenic 30.0%
GATATAGCGGTAAATTACAA+AGG - Chr4:92214731-92214750 MsG0480023999.01.T01:intron 30.0%
GATATTTAGCAATTAGTGTG+CGG - Chr4:92215497-92215516 MsG0480023999.01.T01:intron 30.0%
GATGCAAACATTGAAAAATC+TGG + Chr4:92215953-92215972 None:intergenic 30.0%
GCTAACTTATGATCGTTATT+TGG + Chr4:92212647-92212666 None:intergenic 30.0%
GGAGAGAAACTTATATAAGT+CGG + Chr4:92211419-92211438 None:intergenic 30.0%
GGCTAATAGAAATACCATAA+AGG - Chr4:92216480-92216499 MsG0480023999.01.T01:intron 30.0%
GTTGTGTCAATCATTAATCT+TGG - Chr4:92215767-92215786 MsG0480023999.01.T01:intron 30.0%
TCAGTTGTAATGTTATCGTT+AGG - Chr4:92214381-92214400 MsG0480023999.01.T01:intron 30.0%
TGAATGATTCATGGATACTT+TGG + Chr4:92212308-92212327 None:intergenic 30.0%
TGAATTCTCATTAGACGTTA+GGG - Chr4:92211755-92211774 MsG0480023999.01.T01:intron 30.0%
TGCATCTATGATATTCTAAC+CGG + Chr4:92212701-92212720 None:intergenic 30.0%
! ACTAATGTTGGTGAATTTGA+TGG - Chr4:92211148-92211167 MsG0480023999.01.T01:CDS 30.0%
! CACATTTTGAATGCAAACTA+TGG - Chr4:92213492-92213511 MsG0480023999.01.T01:intron 30.0%
! CCATTTTCTCCAATTTGATT+TGG - Chr4:92214892-92214911 MsG0480023999.01.T01:intron 30.0%
! CTTTTCATATTCCTCTGTTT+TGG - Chr4:92212970-92212989 MsG0480023999.01.T01:intron 30.0%
! GTTTTGCTTATACTCTTTGA+CGG - Chr4:92214832-92214851 MsG0480023999.01.T01:intron 30.0%
! TTTGGAGTTGATTCTTTCAA+AGG + Chr4:92212629-92212648 None:intergenic 30.0%
!! AAAAAGGGTATCATATTCGA+TGG - Chr4:92213147-92213166 MsG0480023999.01.T01:intron 30.0%
!! ATAACATTGATAGTGTAGTG+TGG + Chr4:92212433-92212452 None:intergenic 30.0%
!! ATTTTGTTTGAGAGTTTGGA+GGG + Chr4:92214190-92214209 None:intergenic 30.0%
!! CATATTTTTAAGGACATGCA+AGG + Chr4:92211497-92211516 None:intergenic 30.0%
!! GATTTTTCAATGTTTGCATC+AGG - Chr4:92215953-92215972 MsG0480023999.01.T01:CDS 30.0%
!! GTTATGGTTTGTTTGTTATC+TGG - Chr4:92213671-92213690 MsG0480023999.01.T01:intron 30.0%
!! GTTCTAGTTTCAATTGATTC+AGG - Chr4:92215719-92215738 MsG0480023999.01.T01:intron 30.0%
!! GTTGTTTTCATAAGTTATCC+TGG - Chr4:92210854-92210873 MsG0480023999.01.T01:intron 30.0%
!! TACTAGTACTACTTTTGAAC+CGG - Chr4:92216027-92216046 MsG0480023999.01.T01:intron 30.0%
!! TAGTGTGGTCTTTTGTTATA+TGG + Chr4:92212418-92212437 None:intergenic 30.0%
!! TGCTAGTTTACTGAGATTTT+TGG - Chr4:92213815-92213834 MsG0480023999.01.T01:intron 30.0%
!! TTGTTATTTAAAGGTCAGCT+TGG + Chr4:92216239-92216258 None:intergenic 30.0%
!! TTTGGGAGAATGTTTTTGAA+GGG - Chr4:92213923-92213942 MsG0480023999.01.T01:CDS 30.0%
!! TTTTGGGAGAATGTTTTTGA+AGG - Chr4:92213922-92213941 MsG0480023999.01.T01:CDS 30.0%
!! TTTTTACTGTACTGATGACA+CGG + Chr4:92212596-92212615 None:intergenic 30.0%
!! TTTTTCAATGTTTGCATCAG+GGG - Chr4:92215955-92215974 MsG0480023999.01.T01:CDS 30.0%
!!! CAATGAATTCGTTTTGAAGA+AGG - Chr4:92210424-92210443 MsG0480023999.01.T01:three_prime_UTR 30.0%
!!! GATTTGCACATTTGTTTTGA+AGG + Chr4:92211962-92211981 None:intergenic 30.0%
!!! GGAGAATTCTTCACTTTTTT+TGG - Chr4:92213905-92213924 MsG0480023999.01.T01:intron 30.0%
!!! GTTATTTTTATAAGCTGTCC+AGG + Chr4:92210875-92210894 None:intergenic 30.0%
!!! TCTTCATCAGTTTTGACTTT+TGG + Chr4:92216683-92216702 None:intergenic 30.0%
!!! TGTTTGTTATCTGGTCTTTT+GGG - Chr4:92213680-92213699 MsG0480023999.01.T01:intron 30.0%
!!! TTGCTCTCATTTTAACTTGT+AGG - Chr4:92213649-92213668 MsG0480023999.01.T01:intron 30.0%
!!! TTGTTTGTTATCTGGTCTTT+TGG - Chr4:92213679-92213698 MsG0480023999.01.T01:intron 30.0%
AAAAATGTATATGACCCGTG+CGG + Chr4:92211846-92211865 None:intergenic 35.0%
AAAGGAAATGAAGGAGTAAG+AGG + Chr4:92215578-92215597 None:intergenic 35.0%
AAGTGAGGATGATGTACAAT+CGG + Chr4:92212780-92212799 None:intergenic 35.0%
AATGACTAGTATAGCAAAGG+GGG + Chr4:92214316-92214335 None:intergenic 35.0%
AATTGCACCATGAAATTGGA+GGG + Chr4:92212530-92212549 None:intergenic 35.0%
AATTTCTGCAATGGATAGGT+GGG - Chr4:92211117-92211136 MsG0480023999.01.T01:intron 35.0%
ACAGAAGAGAAAGGAAATGA+AGG + Chr4:92215587-92215606 None:intergenic 35.0%
ACTGTGATCAATTTCTGCAA+TGG - Chr4:92211108-92211127 MsG0480023999.01.T01:intron 35.0%
AGATATTTGTGAGCGAAAGT+GGG - Chr4:92209994-92210013 MsG0480023999.01.T01:three_prime_UTR 35.0%
AGTGCAACACTAAAATCCTT+TGG + Chr4:92215683-92215702 None:intergenic 35.0%
ATAAATCTCATTCAAGGTGG+GGG - Chr4:92214103-92214122 MsG0480023999.01.T01:intron 35.0%
ATATGTCCTGAAAACGATGT+CGG + Chr4:92214613-92214632 None:intergenic 35.0%
ATATGTGTGTGTCTTGAACT+GGG + Chr4:92212362-92212381 None:intergenic 35.0%
ATCATATTCGATGGAAAGAC+TGG - Chr4:92213156-92213175 MsG0480023999.01.T01:intron 35.0%
ATCATGGCTATGTCATTCTT+TGG - Chr4:92210719-92210738 MsG0480023999.01.T01:CDS 35.0%
ATCTAGTTGACAGAAGAGAA+AGG + Chr4:92215596-92215615 None:intergenic 35.0%
ATGCATGTCTTGATATTACG+TGG - Chr4:92215441-92215460 MsG0480023999.01.T01:intron 35.0%
ATTAGACGTTAGGGTAAAAC+TGG - Chr4:92211764-92211783 MsG0480023999.01.T01:intron 35.0%
ATTCAAGGGATTGGATATAG+CGG - Chr4:92214718-92214737 MsG0480023999.01.T01:intron 35.0%
ATTCATCATGATAACCGATC+TGG + Chr4:92210273-92210292 None:intergenic 35.0%
CAATTTCATGGTGCAATTCA+GGG - Chr4:92212532-92212551 MsG0480023999.01.T01:CDS 35.0%
CAGGAAACAAAGTGAAAACA+CGG - Chr4:92216170-92216189 MsG0480023999.01.T01:intron 35.0%
CATAGAAGTTATTCGAGCTA+AGG - Chr4:92213517-92213536 MsG0480023999.01.T01:intron 35.0%
CCTTTACAACTTGATCTTCA+CGG + Chr4:92216607-92216626 None:intergenic 35.0%
CGAAACATTTCTCTCTATAC+GGG - Chr4:92215338-92215357 MsG0480023999.01.T01:intron 35.0%
CGATCTAGTAAAGAGAAAAG+GGG + Chr4:92211810-92211829 None:intergenic 35.0%
CTATGTCATTCTTTGGACTT+TGG - Chr4:92210726-92210745 MsG0480023999.01.T01:CDS 35.0%
CTGAATTCTCATTAGACGTT+AGG - Chr4:92211754-92211773 MsG0480023999.01.T01:intron 35.0%
GAAGAAGAGATTGTTATGTC+TGG - Chr4:92214790-92214809 MsG0480023999.01.T01:intron 35.0%
GAAGATAAAGGAGGAGTAAA+GGG + Chr4:92214149-92214168 None:intergenic 35.0%
GACATATCTGAGGATAATAG+TGG - Chr4:92214442-92214461 MsG0480023999.01.T01:intron 35.0%
GACGATCTAGTAAAGAGAAA+AGG + Chr4:92211812-92211831 None:intergenic 35.0%
GAGAGACAAATACGTGAAAA+TGG + Chr4:92213322-92213341 None:intergenic 35.0%
GATATAGGGAATGTTTGGAT+TGG + Chr4:92210992-92211011 None:intergenic 35.0%
GATCAATTTCTGCAATGGAT+AGG - Chr4:92211113-92211132 MsG0480023999.01.T01:intron 35.0%
GATTGCTTAAATCTAAAGGG+AGG + Chr4:92211271-92211290 None:intergenic 35.0%
GCGAGATTGCTTAAATCTAA+AGG + Chr4:92211275-92211294 None:intergenic 35.0%
GGATCCTTCTTGTATCATTA+CGG - Chr4:92212209-92212228 MsG0480023999.01.T01:intron 35.0%
GTTACAAATTTACTGCCATC+TGG + Chr4:92213114-92213133 None:intergenic 35.0%
GTTCTCATTAGATGTTGTGT+TGG + Chr4:92211676-92211695 None:intergenic 35.0%
GTTGTGCTTATAAACCTACA+AGG - Chr4:92211191-92211210 MsG0480023999.01.T01:CDS 35.0%
TACATGATTCCGTAAGTTTC+AGG - Chr4:92217168-92217187 MsG0480023999.01.T01:five_prime_UTR 35.0%
TAGATATTTGTGAGCGAAAG+TGG - Chr4:92209993-92210012 MsG0480023999.01.T01:three_prime_UTR 35.0%
TAGCGGTAAATTACAAAGGA+AGG - Chr4:92214735-92214754 MsG0480023999.01.T01:intron 35.0%
TAGTACTAGTACTCACATCT+CGG + Chr4:92216018-92216037 None:intergenic 35.0%
TATATGTGTGTGTCTTGAAC+TGG + Chr4:92212363-92212382 None:intergenic 35.0%
TCATCCGTAATGATACAAGA+AGG + Chr4:92212216-92212235 None:intergenic 35.0%
TCTCTTCTGTCAACTAGATA+AGG - Chr4:92215597-92215616 MsG0480023999.01.T01:intron 35.0%
TGAAGATAAAGGAGGAGTAA+AGG + Chr4:92214150-92214169 None:intergenic 35.0%
TGAAGATCAGATGTCTAACA+GGG + Chr4:92214364-92214383 None:intergenic 35.0%
TGAATTCTCATTAGACGTCA+GGG - Chr4:92212882-92212901 MsG0480023999.01.T01:intron 35.0%
TGATTCTTTCAAAGGACACA+AGG + Chr4:92212621-92212640 None:intergenic 35.0%
TTAAATGCAAACGACAAGCA+AGG + Chr4:92214931-92214950 None:intergenic 35.0%
TTAATCGAGAAGCTGTTGTT+TGG - Chr4:92215981-92216000 MsG0480023999.01.T01:CDS 35.0%
TTAGACGTTAGGGTAAAACT+GGG - Chr4:92211765-92211784 MsG0480023999.01.T01:intron 35.0%
TTAGATTTAAGCAATCTCGC+AGG - Chr4:92211275-92211294 MsG0480023999.01.T01:CDS 35.0%
TTGATTCCCTGTAATGTACT+TGG + Chr4:92216967-92216986 None:intergenic 35.0%
TTTCCCTTCACAAAAATGCA+TGG + Chr4:92211440-92211459 None:intergenic 35.0%
! AAAAGTATGGGACATATCTG+AGG - Chr4:92214432-92214451 MsG0480023999.01.T01:intron 35.0%
! AATCCCTGATGTTCTCATTT+TGG - Chr4:92217000-92217019 MsG0480023999.01.T01:exon 35.0%
! ACCCTTTTTGTCAGAACTAA+CGG + Chr4:92213136-92213155 None:intergenic 35.0%
! ATACATAAAAGCGCGAACAA+AGG + Chr4:92210540-92210559 None:intergenic 35.0%
! ATCAAGTTGTAAAGGGAAAG+TGG - Chr4:92216612-92216631 MsG0480023999.01.T01:intron 35.0%
! ATGGTATTTCTATTAGCCAC+AGG + Chr4:92216478-92216497 None:intergenic 35.0%
! CAAAAGCTCACTTGTCTTTT+AGG + Chr4:92216745-92216764 None:intergenic 35.0%
! CACTGGTTGTTTGAGTTTAT+TGG - Chr4:92211621-92211640 MsG0480023999.01.T01:intron 35.0%
! CGTGAAGATCAAGTTGTAAA+GGG - Chr4:92216605-92216624 MsG0480023999.01.T01:intron 35.0%
! CTATTGATTGTGCGATATGA+AGG - Chr4:92216834-92216853 MsG0480023999.01.T01:CDS 35.0%
! GAACTCCAAAAGTACATTGA+CGG + Chr4:92214048-92214067 None:intergenic 35.0%
! GAATATAGTTTGGTTAGCTC+AGG - Chr4:92216544-92216563 MsG0480023999.01.T01:intron 35.0%
! GTTACTTCTGAGAATGGTTA+AGG + Chr4:92214650-92214669 None:intergenic 35.0%
! GTTGTTTGAGTTTATTGGAG+TGG - Chr4:92211626-92211645 MsG0480023999.01.T01:intron 35.0%
! TAATCGAGAAGCTGTTGTTT+GGG - Chr4:92215982-92216001 MsG0480023999.01.T01:CDS 35.0%
! TATCTTGTCACTGTTTCTCT+TGG - Chr4:92214544-92214563 MsG0480023999.01.T01:intron 35.0%
! TATTTCTATTAGCCACAGGT+TGG + Chr4:92216474-92216493 None:intergenic 35.0%
! TCAAGTTGTAAAGGGAAAGT+GGG - Chr4:92216613-92216632 MsG0480023999.01.T01:CDS 35.0%
! TCTCCATGCATTTTTGTGAA+GGG - Chr4:92211434-92211453 MsG0480023999.01.T01:CDS 35.0%
! TGACAAGTCTGCAAAAGTAT+GGG - Chr4:92214420-92214439 MsG0480023999.01.T01:intron 35.0%
! TGATGTACAATCGGATTTTC+TGG + Chr4:92212771-92212790 None:intergenic 35.0%
! TTTATTGATTATGGCAGGTC+TGG - Chr4:92213283-92213302 MsG0480023999.01.T01:intron 35.0%
! TTTGTTATATGGAGTGTACC+AGG + Chr4:92212407-92212426 None:intergenic 35.0%
!! AACCGTTAGTTCTGACAAAA+AGG - Chr4:92213131-92213150 MsG0480023999.01.T01:intron 35.0%
!! ACCGTTAGTTCTGACAAAAA+GGG - Chr4:92213132-92213151 MsG0480023999.01.T01:intron 35.0%
!! GATTTTGTTTGAGAGTTTGG+AGG + Chr4:92214191-92214210 None:intergenic 35.0%
!! TAGCTTACTTGTTTTCCATC+AGG + Chr4:92213249-92213268 None:intergenic 35.0%
!! TTTTACTGTACTGATGACAC+GGG + Chr4:92212595-92212614 None:intergenic 35.0%
!!! AACAGTCTAAGGCTTTGTTT+TGG - Chr4:92213841-92213860 MsG0480023999.01.T01:intron 35.0%
!!! ATTTTTGGCACAACAGTCTA+AGG - Chr4:92213830-92213849 MsG0480023999.01.T01:intron 35.0%
!!! CTTTTGGAGTTCCCATATAT+TGG - Chr4:92214056-92214075 MsG0480023999.01.T01:CDS 35.0%
!!! GACTTTTGGAAGCATTGTAT+AGG + Chr4:92216669-92216688 None:intergenic 35.0%
!!! TAAGGCTTTGTTTTGGAGTT+TGG - Chr4:92213848-92213867 MsG0480023999.01.T01:intron 35.0%
AAACATCCCCTCTCTAACTT+GGG + Chr4:92216722-92216741 None:intergenic 40.0%
AACTCAAAACTCGTCTTGAG+TGG + Chr4:92211174-92211193 None:intergenic 40.0%
AAGGAGTTTCGTGTTCTTTC+TGG - Chr4:92210443-92210462 MsG0480023999.01.T01:three_prime_UTR 40.0%
ACTGTCCTTGAGAAACATAG+GGG - Chr4:92215902-92215921 MsG0480023999.01.T01:CDS 40.0%
AGACTGTCCTTGAGAAACAT+AGG - Chr4:92215900-92215919 MsG0480023999.01.T01:CDS 40.0%
AGCCATCATAACTACAAGAC+AGG + Chr4:92214684-92214703 None:intergenic 40.0%
AGTACTAGTACTCACATCTC+GGG + Chr4:92216017-92216036 None:intergenic 40.0%
AGTGCTTCATGGAGATTTCT+AGG + Chr4:92215028-92215047 None:intergenic 40.0%
AGTTATTCGAGCTAAGGGAT+AGG - Chr4:92213523-92213542 MsG0480023999.01.T01:intron 40.0%
AGTTTCGTGTTCTTTCTGGA+AGG - Chr4:92210447-92210466 MsG0480023999.01.T01:three_prime_UTR 40.0%
ATAAAGGAGGAGTAAAGGGA+AGG + Chr4:92214145-92214164 None:intergenic 40.0%
ATATGAGATTGACCAACCTG+TGG - Chr4:92216459-92216478 MsG0480023999.01.T01:intron 40.0%
ATCGGTGAGTTATCTTCTGA+AGG - Chr4:92213186-92213205 MsG0480023999.01.T01:intron 40.0%
ATTAGACGTCAGGGTAAAAC+TGG - Chr4:92212891-92212910 MsG0480023999.01.T01:intron 40.0%
ATTGCACCATGAAATTGGAG+GGG + Chr4:92212529-92212548 None:intergenic 40.0%
CAAGATAATCGTTCAACCAC+AGG + Chr4:92214531-92214550 None:intergenic 40.0%
CAATTTCTGCAATGGATAGG+TGG - Chr4:92211116-92211135 MsG0480023999.01.T01:intron 40.0%
CACACGAGACAATTTCTGAT+TGG - Chr4:92215130-92215149 MsG0480023999.01.T01:intron 40.0%
CACGGATAAATTGTCTTGCT+TGG - Chr4:92216383-92216402 MsG0480023999.01.T01:intron 40.0%
CAGCATAAATACTGCCAGTA+TGG + Chr4:92213215-92213234 None:intergenic 40.0%
CCAATTTCATGGTGCAATTC+AGG - Chr4:92212531-92212550 MsG0480023999.01.T01:CDS 40.0%
CCTGAATTGCACCATGAAAT+TGG + Chr4:92212534-92212553 None:intergenic 40.0%
CTCCTGTCTTGTAGTTATGA+TGG - Chr4:92214679-92214698 MsG0480023999.01.T01:intron 40.0%
CTGAAGATCAGATGTCTAAC+AGG + Chr4:92214365-92214384 None:intergenic 40.0%
CTGAATTCTCATTAGACGTC+AGG - Chr4:92212881-92212900 MsG0480023999.01.T01:intron 40.0%
CTGACAAGTCTGCAAAAGTA+TGG - Chr4:92214419-92214438 MsG0480023999.01.T01:intron 40.0%
CTTCTGTCAACTAGATAAGG+CGG - Chr4:92215600-92215619 MsG0480023999.01.T01:intron 40.0%
GAATTGCACCATGAAATTGG+AGG + Chr4:92212531-92212550 None:intergenic 40.0%
GACAATTTATCCGTGCAGTA+TGG + Chr4:92216378-92216397 None:intergenic 40.0%
GACTGTCCTTGAGAAACATA+GGG - Chr4:92215901-92215920 MsG0480023999.01.T01:CDS 40.0%
GAGTTGAAGACATGCTTGTA+GGG - Chr4:92214503-92214522 MsG0480023999.01.T01:intron 40.0%
GATGCTGAAGCCATTGATAT+CGG - Chr4:92215650-92215669 MsG0480023999.01.T01:intron 40.0%
GATGGAAGTGAAGCCATTAT+TGG - Chr4:92215821-92215840 MsG0480023999.01.T01:intron 40.0%
GCAGTATTTATGCTGTTAGC+TGG - Chr4:92213220-92213239 MsG0480023999.01.T01:intron 40.0%
GTATGGTGTGAGAAACTCAA+TGG - Chr4:92211297-92211316 MsG0480023999.01.T01:CDS 40.0%
TAAAGGAGGAGTAAAGGGAA+GGG + Chr4:92214144-92214163 None:intergenic 40.0%
TAAGTTAGCGTCTGTGATGA+AGG - Chr4:92212658-92212677 MsG0480023999.01.T01:CDS 40.0%
TACAACTTGATCTTCACGGA+GGG + Chr4:92216603-92216622 None:intergenic 40.0%
TAGCAATCCTACTGCTATCA+GGG + Chr4:92216411-92216430 None:intergenic 40.0%
TATGTCCTGAAAACGATGTC+GGG + Chr4:92214612-92214631 None:intergenic 40.0%
TCTCTCTTTCAAGATGAGCT+CGG - Chr4:92210145-92210164 MsG0480023999.01.T01:three_prime_UTR 40.0%
TGATATCGGAAGTCAACCAA+AGG - Chr4:92215664-92215683 MsG0480023999.01.T01:intron 40.0%
TGTGTGAGATATTCTCCAGA+TGG - Chr4:92213096-92213115 MsG0480023999.01.T01:intron 40.0%
TTACAACTTGATCTTCACGG+AGG + Chr4:92216604-92216623 None:intergenic 40.0%
TTAGACGTCAGGGTAAAACT+GGG - Chr4:92212892-92212911 MsG0480023999.01.T01:intron 40.0%
TTATCACCCCAAGTTAGAGA+GGG - Chr4:92216712-92216731 MsG0480023999.01.T01:CDS 40.0%
TTCTGTCAACTAGATAAGGC+GGG - Chr4:92215601-92215620 MsG0480023999.01.T01:intron 40.0%
TTTAAGCAATCTCGCAGGTA+TGG - Chr4:92211280-92211299 MsG0480023999.01.T01:CDS 40.0%
! ACTTCTGAGAATGGTTAAGG+AGG + Chr4:92214647-92214666 None:intergenic 40.0%
! AGAAATCTCCATGAAGCACT+TGG - Chr4:92215028-92215047 MsG0480023999.01.T01:intron 40.0%
! ATAAGGCGGGTTTCTTTACA+TGG - Chr4:92215614-92215633 MsG0480023999.01.T01:intron 40.0%
! ATCTGAGGATAATAGTGGGA+AGG - Chr4:92214447-92214466 MsG0480023999.01.T01:intron 40.0%
! ATTTTCACCCAACGGTGAAT+GGG - Chr4:92210355-92210374 MsG0480023999.01.T01:three_prime_UTR 40.0%
! CCGTGAAGATCAAGTTGTAA+AGG - Chr4:92216604-92216623 MsG0480023999.01.T01:intron 40.0%
! CTCTCCATGCATTTTTGTGA+AGG - Chr4:92211433-92211452 MsG0480023999.01.T01:CDS 40.0%
! GTTAAGTGGATTCAAGGGAT+TGG - Chr4:92214709-92214728 MsG0480023999.01.T01:intron 40.0%
! TAAGGCGGGTTTCTTTACAT+GGG - Chr4:92215615-92215634 MsG0480023999.01.T01:intron 40.0%
! TCCAAAAGTACATTGACGGA+GGG + Chr4:92214044-92214063 None:intergenic 40.0%
! TCTAGGGTTACTTCTGAGAA+TGG + Chr4:92214656-92214675 None:intergenic 40.0%
! TGGCAATGATGAGGATTTTC+TGG + Chr4:92212817-92212836 None:intergenic 40.0%
! TGGTTGACTTCCGATATCAA+TGG + Chr4:92215663-92215682 None:intergenic 40.0%
! TTGTCACTGTTTCTCTTGGT+GGG - Chr4:92214548-92214567 MsG0480023999.01.T01:intron 40.0%
!! AAAATTGGTGCTACAGCAGT+TGG + Chr4:92212475-92212494 None:intergenic 40.0%
!! AAATTGGTGCTACAGCAGTT+GGG + Chr4:92212474-92212493 None:intergenic 40.0%
!! ACATTGATTTGTTCTGCCTC+TGG - Chr4:92214478-92214497 MsG0480023999.01.T01:intron 40.0%
AAAGACACACACATAGGACC+TGG - Chr4:92212386-92212405 MsG0480023999.01.T01:CDS 45.0%
AACATCCCCTCTCTAACTTG+GGG + Chr4:92216721-92216740 None:intergenic 45.0%
AATGCAGTGCACGATGATGA+TGG + Chr4:92210124-92210143 None:intergenic 45.0%
ACAACTTGATCTTCACGGAG+GGG + Chr4:92216602-92216621 None:intergenic 45.0%
ACATGCTGTACCATACTGCA+CGG - Chr4:92216365-92216384 MsG0480023999.01.T01:intron 45.0%
ACCATCCTGACCACCAATAA+TGG + Chr4:92215837-92215856 None:intergenic 45.0%
ACCTAAGTGAGCACCCTTTA+TGG + Chr4:92216497-92216516 None:intergenic 45.0%
AGCAATCCTACTGCTATCAG+GGG + Chr4:92216410-92216429 None:intergenic 45.0%
AGTGTGCGGGACAAATTTCA+TGG - Chr4:92215511-92215530 MsG0480023999.01.T01:intron 45.0%
ATGTCCTGAAAACGATGTCG+GGG + Chr4:92214611-92214630 None:intergenic 45.0%
CAATGGATAGGTGGGATTCT+GGG - Chr4:92211125-92211144 MsG0480023999.01.T01:CDS 45.0%
CATGATAACCGATCTGGCAT+TGG + Chr4:92210267-92210286 None:intergenic 45.0%
CTCACTTAGGTGGGGTTTAT+GGG - Chr4:92216506-92216525 MsG0480023999.01.T01:intron 45.0%
CTTATCACCCCAAGTTAGAG+AGG - Chr4:92216711-92216730 MsG0480023999.01.T01:CDS 45.0%
GAAACATCCCCTCTCTAACT+TGG + Chr4:92216723-92216742 None:intergenic 45.0%
GAAGGATCGATGATCTTCAG+TGG - Chr4:92210465-92210484 MsG0480023999.01.T01:three_prime_UTR 45.0%
GACAAGAAAATCCTCTCCAC+AGG + Chr4:92211233-92211252 None:intergenic 45.0%
GATAGCAGTAGGATTGCTAC+AGG - Chr4:92216412-92216431 MsG0480023999.01.T01:intron 45.0%
GCGACAATTCTGATACCATC+AGG + Chr4:92210494-92210513 None:intergenic 45.0%
GGAAAGACTGGAGAGAAGAT+CGG - Chr4:92213168-92213187 MsG0480023999.01.T01:intron 45.0%
GGAAGTGAAGCCATTATTGG+TGG - Chr4:92215824-92215843 MsG0480023999.01.T01:intron 45.0%
GGAGTTGAAGACATGCTTGT+AGG - Chr4:92214502-92214521 MsG0480023999.01.T01:intron 45.0%
GGAGTTTGGAGGAAAACAGT+GGG - Chr4:92213862-92213881 MsG0480023999.01.T01:intron 45.0%
GTAAGCATGTTCGCCATAGA+CGG + Chr4:92210318-92210337 None:intergenic 45.0%
GTAGCAATCCTACTGCTATC+AGG + Chr4:92216412-92216431 None:intergenic 45.0%
TAGCACCCCTATGTTTCTCA+AGG + Chr4:92215910-92215929 None:intergenic 45.0%
TATCACCCCAAGTTAGAGAG+GGG - Chr4:92216713-92216732 MsG0480023999.01.T01:CDS 45.0%
TCTAACCCCCTCCAATTTCA+TGG - Chr4:92212520-92212539 MsG0480023999.01.T01:CDS 45.0%
TCTTTACATGGGGATCAGTG+CGG - Chr4:92215626-92215645 MsG0480023999.01.T01:intron 45.0%
TGGAGTTTGGAGGAAAACAG+TGG - Chr4:92213861-92213880 MsG0480023999.01.T01:intron 45.0%
TGGTGTGAGAAACTCAATGG+CGG - Chr4:92211300-92211319 MsG0480023999.01.T01:CDS 45.0%
TGTTTGAGAGTTTGGAGGGA+GGG + Chr4:92214186-92214205 None:intergenic 45.0%
TTGCACCATGAAATTGGAGG+GGG + Chr4:92212528-92212547 None:intergenic 45.0%
TTGTTTGAGAGTTTGGAGGG+AGG + Chr4:92214187-92214206 None:intergenic 45.0%
TTTGGAGGAAAACAGTGGGA+GGG - Chr4:92213866-92213885 MsG0480023999.01.T01:intron 45.0%
! AAGGCGGGTTTCTTTACATG+GGG - Chr4:92215616-92215635 MsG0480023999.01.T01:intron 45.0%
! ACAATGCGAAAAGGCCTTGT+AGG + Chr4:92211208-92211227 None:intergenic 45.0%
! AGGATGCTTTTATCCGTGTC+TGG - Chr4:92216569-92216588 MsG0480023999.01.T01:intron 45.0%
! ATTGGTGTAGGTGATGGTGT+TGG + Chr4:92210249-92210268 None:intergenic 45.0%
! CTCCAAAAGTACATTGACGG+AGG + Chr4:92214045-92214064 None:intergenic 45.0%
! CTTGTCACTGTTTCTCTTGG+TGG - Chr4:92214547-92214566 MsG0480023999.01.T01:intron 45.0%
! GATTTTCACCCAACGGTGAA+TGG - Chr4:92210354-92210373 MsG0480023999.01.T01:three_prime_UTR 45.0%
! GGTATCAGAATTGTCGCTTC+TGG - Chr4:92210497-92210516 MsG0480023999.01.T01:three_prime_UTR 45.0%
! GGTGAGTTATCTTCTGAAGG+TGG - Chr4:92213189-92213208 MsG0480023999.01.T01:intron 45.0%
! GTAGGTGATGGTGTTGGATT+TGG + Chr4:92210243-92210262 None:intergenic 45.0%
! TGAAGCCATTATTGGTGGTC+AGG - Chr4:92215829-92215848 MsG0480023999.01.T01:intron 45.0%
!! ACCATAAAGGGTGCTCACTT+AGG - Chr4:92216493-92216512 MsG0480023999.01.T01:intron 45.0%
!! ATAAAGGGTGCTCACTTAGG+TGG - Chr4:92216496-92216515 MsG0480023999.01.T01:intron 45.0%
!! TAAAGGGTGCTCACTTAGGT+GGG - Chr4:92216497-92216516 MsG0480023999.01.T01:intron 45.0%
!! TACAAGACAGGAGCACTCTA+GGG + Chr4:92214672-92214691 None:intergenic 45.0%
!! TGGGATTCTGGGACTAATGT+TGG - Chr4:92211136-92211155 MsG0480023999.01.T01:CDS 45.0%
!! TTGATTTGTTCTGCCTCTGG+TGG - Chr4:92214481-92214500 MsG0480023999.01.T01:intron 45.0%
!!! GGCTTTGTTTTGGAGTTTGG+AGG - Chr4:92213851-92213870 MsG0480023999.01.T01:intron 45.0%
!! CTATATATATATATATATTT+AGG - Chr4:92210627-92210646 MsG0480023999.01.T01:CDS 5.0%
!! TTTATAAAAAAAAAAGTTAT+TGG + Chr4:92211912-92211931 None:intergenic 5.0%
!!! ATATTATTTTTAAAAAAACA+TGG - Chr4:92212188-92212207 MsG0480023999.01.T01:intron 5.0%
ACTAGTACTCACATCTCGGG+AGG + Chr4:92216014-92216033 None:intergenic 50.0%
AGATGCAACCCATTCACCGT+TGG + Chr4:92210366-92210385 None:intergenic 50.0%
AGTACATTGACGGAGGGCTT+TGG + Chr4:92214038-92214057 None:intergenic 50.0%
CACCTACACCAATGCCAGAT+CGG - Chr4:92210256-92210275 MsG0480023999.01.T01:three_prime_UTR 50.0%
CATAGACGGAGACATGAAGG+GGG + Chr4:92210304-92210323 None:intergenic 50.0%
CATGTCTTCAACTCCACCAG+AGG + Chr4:92214497-92214516 None:intergenic 50.0%
CCACAGGTGACAATGCGAAA+AGG + Chr4:92211217-92211236 None:intergenic 50.0%
CCATAGACGGAGACATGAAG+GGG + Chr4:92210305-92210324 None:intergenic 50.0%
CTCTTCTTCTGCAGCTGCTA+AGG + Chr4:92214779-92214798 None:intergenic 50.0%
CTCTTTCAAGATGAGCTCGG+TGG - Chr4:92210148-92210167 MsG0480023999.01.T01:three_prime_UTR 50.0%
CTGATGACACGGGACATGTA+TGG + Chr4:92212585-92212604 None:intergenic 50.0%
GAGCTTACGTGGCAATGATG+AGG + Chr4:92212826-92212845 None:intergenic 50.0%
GAGGAGTAAAGGGAAGGGAA+AGG + Chr4:92214139-92214158 None:intergenic 50.0%
GAGGGGAGGAAAGAAAAGGT+AGG - Chr4:92213884-92213903 MsG0480023999.01.T01:intron 50.0%
GAGGGGTTATCTTCCAGACA+CGG + Chr4:92216585-92216604 None:intergenic 50.0%
GATCTTCAGTGGTCTCCTGA+TGG - Chr4:92210476-92210495 MsG0480023999.01.T01:three_prime_UTR 50.0%
GATGCAACCCATTCACCGTT+GGG + Chr4:92210365-92210384 None:intergenic 50.0%
GCAATGGATAGGTGGGATTC+TGG - Chr4:92211124-92211143 MsG0480023999.01.T01:CDS 50.0%
GCATCTGTTGTCTCGTCTGA+TGG - Chr4:92215803-92215822 MsG0480023999.01.T01:intron 50.0%
GCCATAGACGGAGACATGAA+GGG + Chr4:92210306-92210325 None:intergenic 50.0%
GCGACTTGCAAGCTTCTGTT+TGG - Chr4:92216805-92216824 MsG0480023999.01.T01:CDS 50.0%
GCTCACTTAGGTGGGGTTTA+TGG - Chr4:92216505-92216524 MsG0480023999.01.T01:intron 50.0%
GGTAGCAAAGTGAGCTTACG+TGG + Chr4:92211710-92211729 None:intergenic 50.0%
GTCGCTTCTGGTGAAGCTAA+AGG - Chr4:92210509-92210528 MsG0480023999.01.T01:three_prime_UTR 50.0%
GTTGGGTGAAAATCGAGCGA+CGG + Chr4:92210348-92210367 None:intergenic 50.0%
GTTTGAGAGTTTGGAGGGAG+GGG + Chr4:92214185-92214204 None:intergenic 50.0%
GTTTGGAGGAAAACAGTGGG+AGG - Chr4:92213865-92213884 MsG0480023999.01.T01:intron 50.0%
TGCACTAGCCAAGTGCTTCA+TGG + Chr4:92215039-92215058 None:intergenic 50.0%
TTGGAGGAAAACAGTGGGAG+GGG - Chr4:92213867-92213886 MsG0480023999.01.T01:intron 50.0%
! AAAGCCCCGACATCGTTTTC+AGG - Chr4:92214604-92214623 MsG0480023999.01.T01:intron 50.0%
! CCTTTTCGCATTGTCACCTG+TGG - Chr4:92211214-92211233 MsG0480023999.01.T01:CDS 50.0%
! GCCATTATTGGTGGTCAGGA+TGG - Chr4:92215833-92215852 MsG0480023999.01.T01:intron 50.0%
! GCCCTCCGTCAATGTACTTT+TGG - Chr4:92214040-92214059 MsG0480023999.01.T01:CDS 50.0%
! GTCGCTCGATTTTCACCCAA+CGG - Chr4:92210347-92210366 MsG0480023999.01.T01:three_prime_UTR 50.0%
! TAGTTTGGTTAGCTCAGGCG+AGG - Chr4:92216549-92216568 MsG0480023999.01.T01:intron 50.0%
! TCTTCTGAAGGTGGCCATAC+TGG - Chr4:92213198-92213217 MsG0480023999.01.T01:intron 50.0%
!! AAAGGGTGCTCACTTAGGTG+GGG - Chr4:92216498-92216517 MsG0480023999.01.T01:intron 50.0%
!! AACCGATCTGGCATTGGTGT+AGG + Chr4:92210261-92210280 None:intergenic 50.0%
!! CTACAAGACAGGAGCACTCT+AGG + Chr4:92214673-92214692 None:intergenic 50.0%
!! GAGGGCTCTGAAGATAAAGG+AGG + Chr4:92214158-92214177 None:intergenic 50.0%
!! GTGCACGATGATGATGGTGA+TGG + Chr4:92210118-92210137 None:intergenic 50.0%
!! TCTGGCATTGGTGTAGGTGA+TGG + Chr4:92210255-92210274 None:intergenic 50.0%
AAAATCGAGCGACGGTGGCA+GGG + Chr4:92210340-92210359 None:intergenic 55.0%
CCCCTTCATGTCTCCGTCTA+TGG - Chr4:92210302-92210321 MsG0480023999.01.T01:three_prime_UTR 55.0%
CGCCATAGACGGAGACATGA+AGG + Chr4:92210307-92210326 None:intergenic 55.0%
CGCCGGAGATGAGAATACCA+CGG + Chr4:92210217-92210236 None:intergenic 55.0%
CGGAGACATGAAGGGGGTTA+TGG + Chr4:92210298-92210317 None:intergenic 55.0%
CTTGGTCCCCTGATAGCAGT+AGG - Chr4:92216401-92216420 MsG0480023999.01.T01:intron 55.0%
GCTGTTAGCTGGAGTCCTGA+TGG - Chr4:92213231-92213250 MsG0480023999.01.T01:intron 55.0%
GGCCGTGGTATTCTCATCTC+CGG - Chr4:92210212-92210231 MsG0480023999.01.T01:three_prime_UTR 55.0%
GTGGGAGGGGAGGAAAGAAA+AGG - Chr4:92213880-92213899 MsG0480023999.01.T01:intron 55.0%
GTTGCATCTGCTGACGTGTC+AGG - Chr4:92210377-92210396 MsG0480023999.01.T01:three_prime_UTR 55.0%
TACTCACATCTCGGGAGGCA+CGG + Chr4:92216009-92216028 None:intergenic 55.0%
TCAGGAGTTGTCATGCTGCG+TGG - Chr4:92215737-92215756 MsG0480023999.01.T01:intron 55.0%
TCGCATTGTCACCTGTGGAG+AGG - Chr4:92211219-92211238 MsG0480023999.01.T01:CDS 55.0%
TGCACGCCTTCAACAGAACG+TGG - Chr4:92210191-92210210 MsG0480023999.01.T01:three_prime_UTR 55.0%
! ACATGCTTGTAGGGTGCCTG+TGG - Chr4:92214512-92214531 MsG0480023999.01.T01:intron 55.0%
! ACGTTCTGTTGAAGGCGTGC+AGG + Chr4:92210192-92210211 None:intergenic 55.0%
! GATGAGCTCGGTGGAGTTGA+CGG - Chr4:92210157-92210176 MsG0480023999.01.T01:three_prime_UTR 55.0%
! GGTGTTGGATTTGGAGTCGC+CGG + Chr4:92210234-92210253 None:intergenic 55.0%
! GTCAGGTACCGTGAGGATCT+GGG - Chr4:92210394-92210413 MsG0480023999.01.T01:three_prime_UTR 55.0%
! TCAGGTACCGTGAGGATCTG+GGG - Chr4:92210395-92210414 MsG0480023999.01.T01:three_prime_UTR 55.0%
! TGTCAGGTACCGTGAGGATC+TGG - Chr4:92210393-92210412 MsG0480023999.01.T01:three_prime_UTR 55.0%
!! GGGGAGGGCTCTGAAGATAA+AGG + Chr4:92214161-92214180 None:intergenic 55.0%
AGAGTTTGGAGGGAGGGGAG+GGG + Chr4:92214180-92214199 None:intergenic 60.0%
CCACGGCCACGTTCTGTTGA+AGG + Chr4:92210200-92210219 None:intergenic 60.0%
CCTTCAACAGAACGTGGCCG+TGG - Chr4:92210197-92210216 MsG0480023999.01.T01:three_prime_UTR 60.0%
CGTCTACCTATGCTGCCGCA+CGG - Chr4:92211828-92211847 MsG0480023999.01.T01:intron 60.0%
GAAAATCGAGCGACGGTGGC+AGG + Chr4:92210341-92210360 None:intergenic 60.0%
GAGAGTTTGGAGGGAGGGGA+GGG + Chr4:92214181-92214200 None:intergenic 60.0%
GAGGAAAACAGTGGGAGGGG+AGG - Chr4:92213870-92213889 MsG0480023999.01.T01:intron 60.0%
GCGAGTTCCCCAGATCCTCA+CGG + Chr4:92210405-92210424 None:intergenic 60.0%
GGGTGAAAATCGAGCGACGG+TGG + Chr4:92210345-92210364 None:intergenic 60.0%
GTCTACCTATGCTGCCGCAC+GGG - Chr4:92211829-92211848 MsG0480023999.01.T01:intron 60.0%
TATGACCCGTGCGGCAGCAT+AGG + Chr4:92211837-92211856 None:intergenic 60.0%
TGAGAGTTTGGAGGGAGGGG+AGG + Chr4:92214182-92214201 None:intergenic 60.0%
! CTGACGTGTCAGGTACCGTG+AGG - Chr4:92210387-92210406 MsG0480023999.01.T01:three_prime_UTR 60.0%
TTTGGAGGGAGGGGAGGGGA+GGG + Chr4:92214176-92214195 None:intergenic 65.0%
GTTTGGAGGGAGGGGAGGGG+AGG + Chr4:92214177-92214196 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 92209979 92217189 92209979 ID=MsG0480023999.01;Name=MsG0480023999.01
Chr4 mRNA 92209979 92217189 92209979 ID=MsG0480023999.01.T01;Parent=MsG0480023999.01;Name=MsG0480023999.01.T01;_AED=0.33;_eAED=0.33;_QI=179|0.8|0.83|1|1|1|6|580|620
Chr4 exon 92209979 92210816 92209979 ID=MsG0480023999.01.T01:exon:34053;Parent=MsG0480023999.01.T01
Chr4 exon 92211120 92211554 92211120 ID=MsG0480023999.01.T01:exon:34052;Parent=MsG0480023999.01.T01
Chr4 exon 92212343 92212765 92212343 ID=MsG0480023999.01.T01:exon:34051;Parent=MsG0480023999.01.T01
Chr4 exon 92213908 92214094 92213908 ID=MsG0480023999.01.T01:exon:34050;Parent=MsG0480023999.01.T01
Chr4 exon 92215872 92216033 92215872 ID=MsG0480023999.01.T01:exon:34049;Parent=MsG0480023999.01.T01
Chr4 exon 92216613 92217189 92216613 ID=MsG0480023999.01.T01:exon:34048;Parent=MsG0480023999.01.T01
Chr4 five_prime_UTR 92217011 92217189 92217011 ID=MsG0480023999.01.T01:five_prime_utr;Parent=MsG0480023999.01.T01
Chr4 CDS 92216613 92217010 92216613 ID=MsG0480023999.01.T01:cds;Parent=MsG0480023999.01.T01
Chr4 CDS 92215872 92216033 92215872 ID=MsG0480023999.01.T01:cds;Parent=MsG0480023999.01.T01
Chr4 CDS 92213908 92214094 92213908 ID=MsG0480023999.01.T01:cds;Parent=MsG0480023999.01.T01
Chr4 CDS 92212343 92212765 92212343 ID=MsG0480023999.01.T01:cds;Parent=MsG0480023999.01.T01
Chr4 CDS 92211120 92211554 92211120 ID=MsG0480023999.01.T01:cds;Parent=MsG0480023999.01.T01
Chr4 CDS 92210559 92210816 92210559 ID=MsG0480023999.01.T01:cds;Parent=MsG0480023999.01.T01
Chr4 three_prime_UTR 92209979 92210558 92209979 ID=MsG0480023999.01.T01:three_prime_utr;Parent=MsG0480023999.01.T01
Gene Sequence

>MsG0480023999.01.T01

ATGAGCTCGGTGGAGTTGACGGAGACTTACGCCTGCACGCCTTCAACAGAACGTGGCCGTGGTATTCTCATCTCCGGCGACTCCAAATCCAACACCATCACCTACACCAATGCCAGATCGGTTATCATGATGAATCTCCATAACCCCCTTCATGTCTCCGTCTATGGCGAACATGCTTACCCTGCCACCGTCGCTCGATTTTCACCCAACGGTGAATGGGTTGCATCTGCTGACGTGTCAGGTACCGTGAGGATCTGGGGAACTCGCAATGAATTCGTTTTGAAGAAGGAGTTTCGTGTTCTTTCTGGAAGGATCGATGATCTTCAGTGGTCTCCTGATGGTATCAGAATTGTCGCTTCTGGTGAAGCTAAAGGAAACTCCTTTGTTCGCGCTTTTATGTGGGATTCTGGGACTAATGTTGGTGAATTTGATGGCCACTCAAGACGAGTTTTGAGTTGTGCTTATAAACCTACAAGGCCTTTTCGCATTGTCACCTGTGGAGAGGATTTTCTTGTCAACTTTTATGAAGGACCTCCCTTTAGATTTAAGCAATCTCGCAGGGATCATTCAAATTTTGTCAATTGTGTGAGATATTCTCCAGATGGCAGTAAATTTGTAACCGTTAGTTCTGACAAAAAGGGTATCATATTCGATGGAAAGACTGGAGAGAAGATCGGTGAGTTATCTTCTGAAGGTGGCCATACTGGCAGTATTTATGCTGTTAGCTGGAGTCCTGATGGAAAACAAGTGCTGACTGTATCTGCTGACAAGTCTGCAAAAGTATGGGACATATCTGAGGATAATAGTGGGAAGGTGAAGAAAACATTGATTTGTTCTGCCTCTGGTGGAGTTGAAGACATGCTTGTAGGGTGCCTGTGGTTGAACGATTATCTTGTCACTGTTTCTCTTGGTGGGACAATATCAATTTTTTCTGCAAGTGATCTTGATAAAGCCCCGACATCGTTTTCAGGACATATGAAAAATGTTTCCTCCTTAACCATTCTCAGAAGTAACCCTAGAGTGCTCCTGTCTTGTAGTTATGATGGCTTAATAGTTAAGTGGATTCAAGGGATTGGATATAGCGGTAAATTACAAAGGAAGGAAAATTCTCAAATCAAATCCTTAGCAGCTGCAGAAGAAGAGATTGTTATGTCTGGTTTTGATAATAAGATAAGGCGGGTTTCTTTACATGGGGATCAGTGCGGAGATGCTGAAGCCATTGATATCGGAAGTCAACCAAAGGATTTTAGTGTTGCACTTTCGTCTCCTGAACTTGTTCTAGTTTCAATTGATTCAGGAGTTGTCATGCTGCGTGGCACAAAAGTTGTGTCAATCATTAATCTTGGATTTACTGTTACGGCATCTGTTGTCTCGTCTGATGGAAGTGAAGCCATTATTGGTGGTCAGGATGGTAAACTGCACATATATTCTATTTCTGGTGATACACTTGTTGAAGAGACTGTCCTTGAGAAACATAGGGGTGCTATTAGTGTCATACAGTATTCTCCAGATTTTTCAATGTTTGCATCAGGGGATGTTAATCGAGAAGCTGTTGTTTGGGACCGTGCCTCCCGAGATGTGAGTACTAGTACTACTTTTGAACCGGTGAAGCTCAAGAACATGCTGTACCATACTGCACGGATAAATTGTCTTGCTTGGTCCCCTGATAGCAGTAGGATTGCTACAGGATCACTCGACATGTGTGTTATTATATATGAGATTGACCAACCTGTGGCTAATAGAAATACCATAAAGGGTGCTCACTTAGGTGGGGTTTATGGGTTAGTATTCACTGATGAATATAGTTTGGTTAGCTCAGGCGAGGATGCTTTTATCCGTGTCTGGAAGATAACCCCTCCGTGA
Protein sequence

>MsG0480023999.01.T01

MSSVELTETYACTPSTERGRGILISGDSKSNTITYTNARSVIMMNLHNPLHVSVYGEHAYPATVARFSPNGEWVASADVSGTVRIWGTRNEFVLKKEFRVLSGRIDDLQWSPDGIRIVASGEAKGNSFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYEGPPFRFKQSRRDHSNFVNCVRYSPDGSKFVTVSSDKKGIIFDGKTGEKIGELSSEGGHTGSIYAVSWSPDGKQVLTVSADKSAKVWDISEDNSGKVKKTLICSASGGVEDMLVGCLWLNDYLVTVSLGGTISIFSASDLDKAPTSFSGHMKNVSSLTILRSNPRVLLSCSYDGLIVKWIQGIGYSGKLQRKENSQIKSLAAAEEEIVMSGFDNKIRRVSLHGDQCGDAEAIDIGSQPKDFSVALSSPELVLVSIDSGVVMLRGTKVVSIINLGFTVTASVVSSDGSEAIIGGQDGKLHIYSISGDTLVEETVLEKHRGAISVIQYSPDFSMFASGDVNREAVVWDRASRDVSTSTTFEPVKLKNMLYHTARINCLAWSPDSSRIATGSLDMCVIIYEIDQPVANRNTIKGAHLGGVYGLVFTDEYSLVSSGEDAFIRVWKITPP*