AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001248.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001248.01.T02 MTR_1g033840 94.714 227 12 0 213 439 7 233 3.18e-155 453
MsG0180001248.01.T02 MTR_1g033830 65.441 136 27 2 1 118 135 268 1.69e-47 165
MsG0180001248.01.T02 MTR_1g033830 69.231 91 26 1 1 91 135 223 1.46e-31 120
MsG0180001248.01.T02 MTR_2g022880 44.361 133 54 2 4 118 125 255 9.13e-27 109
MsG0180001248.01.T02 MTR_4g094212 42.105 133 57 3 4 118 130 260 1.75e-24 102
MsG0180001248.01.T02 MTR_4g131930 44.776 134 52 4 4 118 56 186 2.73e-24 100
MsG0180001248.01.T02 MTR_4g131930 44.776 134 52 4 4 118 119 249 7.25e-24 100
MsG0180001248.01.T02 MTR_2g022880 40.800 125 61 3 4 122 125 242 8.13e-19 85.9
MsG0180001248.01.T01 MTR_1g033830 56.566 99 18 2 36 134 62 135 1.96e-25 96.7
MsG0180001248.01.T01 MTR_1g033830 56.566 99 18 2 36 134 62 135 6.90e-25 96.7
MsG0180001248.01.T01 MTR_4g094212 42.424 99 32 2 36 134 54 127 1.54e-17 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001248.01.T02 AT2G02180 59.559 136 35 2 1 118 141 274 5.68e-43 153
MsG0180001248.01.T02 AT1G14530 57.353 136 38 2 1 118 131 264 2.60e-32 124
MsG0180001248.01.T02 AT1G14530 59.223 103 34 2 1 97 131 231 2.27e-29 115
MsG0180001248.01.T02 AT5G13770 33.333 216 128 6 229 440 17 220 2.72e-29 120
MsG0180001248.01.T02 AT4G21790 47.368 133 50 3 4 118 132 262 1.45e-27 111
MsG0180001248.01.T01 AT1G14530 52.941 102 17 2 36 134 58 131 1.70e-24 94.7
MsG0180001248.01.T01 AT2G02180 54.545 99 20 2 36 134 68 141 1.85e-24 95.5
MsG0180001248.01.T01 AT1G14530 52.941 102 17 2 36 134 58 131 6.74e-24 94.0

Find 116 sgRNAs with CRISPR-Local

Find 636 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAAATTCTGATCAATTTC+TGG 0.090601 1:-18292558 None:intergenic
ATCAGTGGTGATTATTTATT+TGG 0.140422 1:+18290184 MsG0180001248.01.T01:three_prime_UTR
ATGCACTTCTGGTCTTGTTC+TGG 0.161658 1:+18284568 MsG0180001248.01.T01:CDS
AGAAGAAGTTTCTTCTAAAA+TGG 0.173168 1:-18292478 None:intergenic
GCCACACAAACACAGATTTA+TGG 0.191903 1:-18289982 None:intergenic
CTGTCTAAGGTGTTCTTTGC+AGG 0.219822 1:+18287452 MsG0180001248.01.T01:three_prime_UTR
AGACATTACTGTTCCAATTA+TGG 0.220039 1:-18290437 None:intergenic
TTGGCCTTTGGTTCTGCTTT+TGG 0.225074 1:+18292888 MsG0180001248.01.T02:CDS
AAAGCTAGTTCATGCTTCTT+TGG 0.248495 1:-18292609 None:intergenic
ATGTAATGAGCAACCATAAT+TGG 0.269656 1:+18290424 MsG0180001248.01.T01:three_prime_UTR
CTTTACAACATATGCACTTC+TGG 0.271976 1:+18284557 MsG0180001248.01.T01:CDS
AAGATGCTATTTGCATGTTA+TGG 0.278923 1:+18292992 MsG0180001248.01.T02:CDS
TGGAAATATTACCTTCTCTT+TGG 0.283725 1:+18290067 MsG0180001248.01.T01:three_prime_UTR
CAACATCCATGATCTTAAAA+AGG 0.301822 1:-18284830 None:intergenic
TGATAGTGAAATTGGTGTTT+TGG 0.305565 1:+18292869 MsG0180001248.01.T02:CDS
TGGGTAGTCCAACCATATTC+TGG 0.305600 1:-18283265 None:intergenic
TGAGAAAATGAAACACCTTC+TGG 0.307420 1:-18283285 None:intergenic
TTTAGTTCTGATAGTGAAAT+TGG 0.307538 1:+18292861 MsG0180001248.01.T02:CDS
CAATTGAGAGTTCCAGAATA+TGG 0.308572 1:+18283253 MsG0180001248.01.T01:CDS
ACAATAAGCTTCATATGTTT+AGG 0.309209 1:+18292916 MsG0180001248.01.T02:CDS
TGTTGTGGTTTATGCTGTTC+AGG 0.311273 1:+18284774 MsG0180001248.01.T01:intron
TGCACTTCTGGTCTTGTTCT+GGG 0.328875 1:+18284569 MsG0180001248.01.T01:CDS
ATTTGTTAAGATTCAAGAAA+TGG 0.337576 1:+18292706 MsG0180001248.01.T02:CDS
TTTCCTTATCAGAAGTGTTA+TGG 0.345609 1:+18289602 MsG0180001248.01.T01:three_prime_UTR
TGCTTTGTGACTTTGTCTAA+TGG 0.348519 1:+18290376 MsG0180001248.01.T01:three_prime_UTR
CGTACTAGTCATTCTGTCTA+AGG 0.350388 1:+18287439 MsG0180001248.01.T01:three_prime_UTR
GAAGAAGTTTCTTCTAAAAT+GGG 0.352619 1:-18292477 None:intergenic
GAAAAGGGTAAGAGGAATAG+TGG 0.360837 1:-18290025 None:intergenic
AGATTATTACCAGGTAAGTT+TGG 0.369753 1:+18284595 MsG0180001248.01.T01:exon
TATGTTTAGGAAAACTGTTT+TGG 0.370688 1:+18292929 MsG0180001248.01.T02:CDS
TTACCAGGTAAGTTTGGTAT+TGG 0.376205 1:+18284601 MsG0180001248.01.T01:exon
GGGACATTAGAGGGAAAGTT+GGG 0.377279 1:+18283982 MsG0180001248.01.T01:CDS
ATTCTGATCAATTTCTGGCT+TGG 0.377565 1:-18292553 None:intergenic
TAGGATGGTCCATCACATTA+AGG 0.382104 1:-18289738 None:intergenic
ACACAGATTTATGGATTAAA+CGG 0.392024 1:-18289973 None:intergenic
TTTGTTAAGATTCAAGAAAT+GGG 0.396943 1:+18292707 MsG0180001248.01.T02:CDS
TTAGAACAAGTAGCAGTATC+AGG 0.399987 1:-18292777 None:intergenic
TGGTTTAACGTTGATTTCAT+TGG 0.417309 1:-18292672 None:intergenic
GAAATTGATCAGAATTTGAA+TGG 0.422001 1:+18292561 MsG0180001248.01.T02:CDS
ATTAGACATGGGGACATTAG+AGG 0.424800 1:+18283972 MsG0180001248.01.T01:CDS
GAGAAAATGAAACACCTTCT+GGG 0.439545 1:-18283284 None:intergenic
GAACGACATCGACGATTCTC+CGG 0.444368 1:+18283012 MsG0180001248.01.T01:CDS
GTTAACATCTAAATTGATCA+AGG 0.457767 1:-18292508 None:intergenic
ACCTCGCCGTCGTCGGTGAC+AGG 0.458409 1:+18282933 MsG0180001248.01.T01:CDS
ACTTCATATATTACCTGGTA+AGG 0.460801 1:+18289767 MsG0180001248.01.T01:intron
GTTCCACCAGGTTGAGGAAT+CGG 0.468815 1:-18282993 None:intergenic
ACATTAATTGTATAGAAACT+TGG 0.472412 1:-18284754 None:intergenic
TCACCATAACACTTCTGATA+AGG 0.473201 1:-18289605 None:intergenic
GATTTCATTGGTCTAAACTC+TGG 0.473657 1:-18292660 None:intergenic
CGACGACGGCGAGGTGTTGT+TGG 0.475128 1:-18282925 None:intergenic
GAAATCAAGCAGTGTTGCTA+TGG 0.478426 1:+18292965 MsG0180001248.01.T02:CDS
ACTGCAACAAAAGTGTGAAA+AGG 0.479222 1:-18290041 None:intergenic
AAAAGTGTGAAAAGGGTAAG+AGG 0.480595 1:-18290033 None:intergenic
GATCCGTGGTTGACAACATT+GGG 0.484485 1:+18283930 MsG0180001248.01.T01:CDS
CAACGTTAAACCATGTCATA+AGG 0.485773 1:+18292682 MsG0180001248.01.T02:CDS
GCACATCAAGTAAGATATGT+TGG 0.497834 1:-18284521 None:intergenic
CTGCAACAAAAGTGTGAAAA+GGG 0.498234 1:-18290040 None:intergenic
GGGGACATTAGAGGGAAAGT+TGG 0.501418 1:+18283981 MsG0180001248.01.T01:CDS
TTGTGACTTTGTCTAATGGT+TGG 0.501594 1:+18290380 MsG0180001248.01.T01:three_prime_UTR
TAAATAAACAGTAAGAGTAT+TGG 0.501835 1:-18289824 None:intergenic
GAGTGACAAAGCTTGTATCA+TGG 0.503399 1:+18290268 MsG0180001248.01.T01:three_prime_UTR
TAATATATGAAGTTTAGAAT+AGG 0.508408 1:-18289757 None:intergenic
TTTCTATACAATTAATGTTG+TGG 0.510519 1:+18284759 MsG0180001248.01.T01:intron
TGAGAGTTCCAGAATATGGT+TGG 0.518623 1:+18283257 MsG0180001248.01.T01:CDS
AGTGACAAAGCTTGTATCAT+GGG 0.518687 1:+18290269 MsG0180001248.01.T01:three_prime_UTR
ATCGTCGATGTCGTTCCACC+AGG 0.520262 1:-18283005 None:intergenic
AGATTGAAAATACCGAGAAA+AGG 0.529372 1:+18290157 MsG0180001248.01.T01:three_prime_UTR
TGGCTGATTCTCATAGTCCA+AGG 0.544934 1:+18290204 MsG0180001248.01.T01:three_prime_UTR
AAGAAGTTTCTTCTAAAATG+GGG 0.546150 1:-18292476 None:intergenic
GCACGTGCTGTATCCACTGA+TGG 0.558795 1:+18284724 MsG0180001248.01.T01:intron
ATGTTGTCAACCACGGATCA+CGG 0.558935 1:-18283926 None:intergenic
TATTGTGTGATACCACGCTT+TGG 0.559304 1:-18290116 None:intergenic
TGATCCGTGGTTGACAACAT+TGG 0.561893 1:+18283929 MsG0180001248.01.T01:CDS
AAACGCGAACCTTAATGTGA+TGG 0.562294 1:+18289729 MsG0180001248.01.T01:three_prime_UTR
AAGAAGCTGAGAAGTTTGCA+TGG 0.563168 1:-18292446 None:intergenic
TTAACATCTAAATTGATCAA+GGG 0.564239 1:-18292507 None:intergenic
GATGTCGTTCCACCAGGTTG+AGG 0.564379 1:-18282999 None:intergenic
CGCGGTGGTGAACGCCGCGG+TGG 0.568648 1:+18282956 MsG0180001248.01.T01:CDS
TCCATAAATCTGTGTTTGTG+TGG 0.572174 1:+18289981 MsG0180001248.01.T01:intron
AAAAGGGTAAGAGGAATAGT+GGG 0.575642 1:-18290024 None:intergenic
TTAGACATGGGGACATTAGA+GGG 0.577001 1:+18283973 MsG0180001248.01.T01:CDS
TAACATCTAAATTGATCAAG+GGG 0.580084 1:-18292506 None:intergenic
GGCTGATTCTCATAGTCCAA+GGG 0.583266 1:+18290205 MsG0180001248.01.T01:three_prime_UTR
GACATGATATAATTAGACAT+GGG 0.585372 1:+18283961 MsG0180001248.01.T01:CDS
TTAACAAATACCTTATGACA+TGG 0.590514 1:-18292692 None:intergenic
TCTAAACTTCATATATTACC+TGG 0.590927 1:+18289762 MsG0180001248.01.T01:three_prime_UTR
TGTGTGATACCACGCTTTGG+TGG 0.591434 1:-18290113 None:intergenic
AACTCACCGATTCCTCAACC+TGG 0.591877 1:+18282987 MsG0180001248.01.T01:CDS
ACTCCAATACCAAACTTACC+TGG 0.597489 1:-18284604 None:intergenic
AATGAATAAGACCAAAGAGA+AGG 0.601730 1:-18290078 None:intergenic
CAACAACACCTCGCCGTCGT+CGG 0.609317 1:+18282926 MsG0180001248.01.T01:CDS
GCCGTCGTCGGTGACAGGCG+CGG 0.609384 1:+18282938 MsG0180001248.01.T01:CDS
ACTTGGCTTCAGTCCATCAG+TGG 0.611275 1:-18284737 None:intergenic
GTTGTAAAGAAAGCAAGACT+TGG 0.617097 1:-18284543 None:intergenic
AGAATGACTAGTACGCTGAC+TGG 0.622590 1:-18287431 None:intergenic
ACCGCGCCTGTCACCGACGA+CGG 0.629626 1:-18282939 None:intergenic
TCTGGGCTGAGATTATTACC+AGG 0.631459 1:+18284586 MsG0180001248.01.T01:CDS
AGAAGTTTCTTCTAAAATGG+GGG 0.631673 1:-18292475 None:intergenic
ACTTCCAAAAGCAGAACCAA+AGG 0.638688 1:-18292892 None:intergenic
CCACGGATCACGGAAAATAG+CGG 0.641271 1:-18283916 None:intergenic
AGGAAGCTTCCACCAAAGCG+TGG 0.641984 1:+18290104 MsG0180001248.01.T01:three_prime_UTR
AGACATGATATAATTAGACA+TGG 0.644401 1:+18283960 MsG0180001248.01.T01:CDS
ATATGAAGTTTAGAATAGGA+TGG 0.649295 1:-18289753 None:intergenic
CCGAGAAAAGGAGCAATCAG+TGG 0.653309 1:+18290169 MsG0180001248.01.T01:three_prime_UTR
GCCTGTCACCGACGACGGCG+AGG 0.655892 1:-18282934 None:intergenic
ATATGGTTGGACTACCCAGA+AGG 0.660843 1:+18283270 MsG0180001248.01.T01:CDS
GTCGTCGGTGACAGGCGCGG+TGG 0.677193 1:+18282941 MsG0180001248.01.T01:CDS
TTACCCAATGTTGTCAACCA+CGG 0.685132 1:-18283933 None:intergenic
ACATGATATAATTAGACATG+GGG 0.685839 1:+18283962 MsG0180001248.01.T01:CDS
TCACCGATTCCTCAACCTGG+TGG 0.693137 1:+18282990 MsG0180001248.01.T01:CDS
ATTAGAAGGGAAATGACACG+TGG 0.694940 1:-18292412 None:intergenic
GGACATTAGAGGGAAAGTTG+GGG 0.708285 1:+18283983 MsG0180001248.01.T01:CDS
AGGCGCGGTGGTGAACGCCG+CGG 0.713367 1:+18282953 MsG0180001248.01.T01:CDS
AACATCTAAATTGATCAAGG+GGG 0.721134 1:-18292505 None:intergenic
TGAGTTCAATGCTGCCACCG+CGG 0.734041 1:-18282970 None:intergenic
TTAGAAGGGAAATGACACGT+GGG 0.762539 1:-18292411 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAACAAAAAAAAAGAT+TGG - Chr1:18287365-18287384 None:intergenic 10.0%
!! ATCAAAAATTGAAAAATTTA+AGG + Chr1:18287980-18287999 MsG0180001248.01.T01:intron 10.0%
!! ATTAGAGATATATTAATATT+TGG - Chr1:18288926-18288945 None:intergenic 10.0%
!! TAATGATGTTAATATATATT+GGG - Chr1:18288549-18288568 None:intergenic 10.0%
!! TATGAATTATTATATTGAAT+AGG - Chr1:18291018-18291037 None:intergenic 10.0%
!! TTAATGATGTTAATATATAT+TGG - Chr1:18288550-18288569 None:intergenic 10.0%
!!! AATTCATAAAAATAATTTGT+TGG + Chr1:18291030-18291049 MsG0180001248.01.T02:intron 10.0%
!!! AATTTTGATTTAAAAATAGA+AGG - Chr1:18289634-18289653 None:intergenic 10.0%
!!! ATTTCTTTTTTTTTTTTTGT+TGG + Chr1:18287625-18287644 MsG0180001248.01.T01:intron 10.0%
!!! ATTTTGATTTAAAAATAGAA+GGG - Chr1:18289633-18289652 None:intergenic 10.0%
!!! ATTTTGTTTTTATAAAAAAG+GGG - Chr1:18285755-18285774 None:intergenic 10.0%
!!! GATTTTGTTTTTATAAAAAA+GGG - Chr1:18285756-18285775 None:intergenic 10.0%
!!! TCTATTTTTTTTTGTATATT+TGG - Chr1:18291709-18291728 None:intergenic 10.0%
!!! TGATTTTGTTTTTATAAAAA+AGG - Chr1:18285757-18285776 None:intergenic 10.0%
!! AAAAAATAATGACTGTAATA+TGG - Chr1:18285372-18285391 None:intergenic 15.0%
!! AACATATTAATAATCAAAGA+AGG + Chr1:18290655-18290674 MsG0180001248.01.T02:intron 15.0%
!! AATTAAAATTATGAGTTGTT+AGG - Chr1:18288304-18288323 None:intergenic 15.0%
!! ATGATATATGATGAAATTTA+TGG + Chr1:18284194-18284213 MsG0180001248.01.T01:intron 15.0%
!! CTCTAATAAAGTAATTATTT+GGG + Chr1:18288939-18288958 MsG0180001248.01.T01:intron 15.0%
!! TAAGAGTAATTAAGATTAAT+AGG - Chr1:18288401-18288420 None:intergenic 15.0%
!! TAATATTTCAAATACATTGA+AGG + Chr1:18291506-18291525 MsG0180001248.01.T02:intron 15.0%
!! TCTCTAATAAAGTAATTATT+TGG + Chr1:18288938-18288957 MsG0180001248.01.T01:intron 15.0%
!! TTAAAACAATAAAGCAAAAA+TGG + Chr1:18292055-18292074 MsG0180001248.01.T02:intron 15.0%
!! TTTATAAACGAAAAACAAAA+AGG + Chr1:18291919-18291938 MsG0180001248.01.T02:intron 15.0%
!!! ATTTTTGCTTTATTGTTTTA+AGG - Chr1:18292056-18292075 None:intergenic 15.0%
!!! CTTACTGTTTATTTATTTTT+TGG + Chr1:18289832-18289851 MsG0180001248.01.T01:intron 15.0%
!!! TAATATATGAAGTTTAGAAT+AGG - Chr1:18289760-18289779 None:intergenic 15.0%
!!! TATTATTTTCTTTCCATTTA+GGG + Chr1:18283161-18283180 MsG0180001248.01.T01:intron 15.0%
!!! TATTTATTTTTTGGTAAGAT+TGG + Chr1:18289841-18289860 MsG0180001248.01.T01:intron 15.0%
!!! TCTTTATAAAAGATTTTGAT+AGG + Chr1:18291063-18291082 MsG0180001248.01.T02:intron 15.0%
!!! TTATTATTTTCTTTCCATTT+AGG + Chr1:18283160-18283179 MsG0180001248.01.T01:intron 15.0%
!!! TTGTGTATATGATTTTTATT+AGG + Chr1:18284268-18284287 MsG0180001248.01.T01:intron 15.0%
!!! TTTTGATTTAAAAATAGAAG+GGG - Chr1:18289632-18289651 None:intergenic 15.0%
!!! TTTTGTTTTTATAAAAAAGG+GGG - Chr1:18285754-18285773 None:intergenic 15.0%
!! AATGTAACTAGAAAAAAAAG+AGG + Chr1:18288639-18288658 MsG0180001248.01.T01:intron 20.0%
!! ACATTAATTGTATAGAAACT+TGG - Chr1:18284757-18284776 None:intergenic 20.0%
!! GATTATATTACAATAGCTTA+AGG - Chr1:18284998-18285017 None:intergenic 20.0%
!! TAAGTAAATAAAACCCTAAA+TGG - Chr1:18283177-18283196 None:intergenic 20.0%
!! TACCTTAAGAATTCAAAAAA+AGG - Chr1:18288520-18288539 None:intergenic 20.0%
!! TACTCAAATCAATATAGTAT+TGG + Chr1:18291595-18291614 MsG0180001248.01.T02:intron 20.0%
!! TATTTCAACATAGTAATGAT+CGG + Chr1:18285662-18285681 MsG0180001248.01.T01:intron 20.0%
!! TGATAAATTGAAAGAAGTAA+AGG - Chr1:18287503-18287522 None:intergenic 20.0%
!! TGATGATTACAATTGATTAA+CGG - Chr1:18284330-18284349 None:intergenic 20.0%
!! TTAACATCTAAATTGATCAA+GGG - Chr1:18292510-18292529 None:intergenic 20.0%
!! TTAGTAACTAATTGACTATT+TGG + Chr1:18290839-18290858 MsG0180001248.01.T02:intron 20.0%
!! TTGAAATATTAAATTAGTCC+TGG - Chr1:18291497-18291516 None:intergenic 20.0%
!! TTTCTATACAATTAATGTTG+TGG + Chr1:18284759-18284778 MsG0180001248.01.T01:intron 20.0%
!! TTTGTTAAGATTCAAGAAAT+GGG + Chr1:18292707-18292726 MsG0180001248.01.T02:CDS 20.0%
!!! AAATCAAAATTGATTCCTAT+TGG + Chr1:18289643-18289662 MsG0180001248.01.T01:intron 20.0%
!!! AATATACTGTTTTCAAACTA+TGG + Chr1:18286405-18286424 MsG0180001248.01.T01:intron 20.0%
!!! ACTTAGATAAAAGTTCTAAA+CGG + Chr1:18286347-18286366 MsG0180001248.01.T01:intron 20.0%
!!! AGTAGTTCTATTATATTAGT+GGG - Chr1:18288238-18288257 None:intergenic 20.0%
!!! ATTCTTATTTGTAAAGAACA+GGG + Chr1:18284437-18284456 MsG0180001248.01.T01:intron 20.0%
!!! ATTTGTTAAGATTCAAGAAA+TGG + Chr1:18292706-18292725 MsG0180001248.01.T02:CDS 20.0%
!!! CAAAATCTTTTATAAAGAAG+TGG - Chr1:18291061-18291080 None:intergenic 20.0%
!!! GAAATTCAGACTTTATTTAA+GGG + Chr1:18291226-18291245 MsG0180001248.01.T02:intron 20.0%
!!! GAACATTTAACTTTTATGTA+GGG - Chr1:18286226-18286245 None:intergenic 20.0%
!!! TAAATAAACAGTAAGAGTAT+TGG - Chr1:18289827-18289846 None:intergenic 20.0%
!!! TAAGTTACACTTCAATTTTT+GGG - Chr1:18291577-18291596 None:intergenic 20.0%
!!! TAGTAGTTCTATTATATTAG+TGG - Chr1:18288239-18288258 None:intergenic 20.0%
!!! TATTCTTATTTGTAAAGAAC+AGG + Chr1:18284436-18284455 MsG0180001248.01.T01:intron 20.0%
!!! TCAATTTATCAAGACTTTTA+CGG + Chr1:18287512-18287531 MsG0180001248.01.T01:intron 20.0%
!!! TGAAATTCAGACTTTATTTA+AGG + Chr1:18291225-18291244 MsG0180001248.01.T02:intron 20.0%
!!! TTAGTGATATGTAAACTTTT+TGG + Chr1:18283415-18283434 MsG0180001248.01.T01:intron 20.0%
!!! TTATATATCTATTTTGTCTG+TGG + Chr1:18291625-18291644 MsG0180001248.01.T02:intron 20.0%
!!! TTCCTTTTTTTGAATTCTTA+AGG + Chr1:18288515-18288534 MsG0180001248.01.T01:intron 20.0%
!!! TTTAAAATTCCGATAATTGA+TGG - Chr1:18291300-18291319 None:intergenic 20.0%
!!! TTTGTTTTTATAAAAAAGGG+GGG - Chr1:18285753-18285772 None:intergenic 20.0%
! AAAATTTCCTTAAGCTTATG+CGG - Chr1:18283632-18283651 None:intergenic 25.0%
! AAAGTTACTTAGAAACATCT+GGG + Chr1:18286576-18286595 MsG0180001248.01.T01:intron 25.0%
! AACATGTTGAATGAAAATTG+TGG - Chr1:18292264-18292283 None:intergenic 25.0%
! AATATAAACATGTCAGATGA+GGG - Chr1:18288337-18288356 None:intergenic 25.0%
! AATATTGAAATCAGAACCAA+TGG - Chr1:18287283-18287302 None:intergenic 25.0%
! AATTCCTATAACCTAAACAT+GGG - Chr1:18289409-18289428 None:intergenic 25.0%
! ACAATTCAGTAAAATGAGAA+TGG - Chr1:18285175-18285194 None:intergenic 25.0%
! ACATGATATAATTAGACATG+GGG + Chr1:18283962-18283981 MsG0180001248.01.T01:CDS 25.0%
! ACGGATAATATTATTTCACA+TGG + Chr1:18285147-18285166 MsG0180001248.01.T01:intron 25.0%
! AGACATGATATAATTAGACA+TGG + Chr1:18283960-18283979 MsG0180001248.01.T01:CDS 25.0%
! AGTGCTAGAATTTAATCAAA+AGG - Chr1:18285812-18285831 None:intergenic 25.0%
! ATAATTAAGAGCTATTAGTG+GGG + Chr1:18288982-18289001 MsG0180001248.01.T01:intron 25.0%
! ATATTGCCACTAGTTAAATT+TGG + Chr1:18285852-18285871 MsG0180001248.01.T01:intron 25.0%
! ATCAGTGGTGATTATTTATT+TGG + Chr1:18290184-18290203 MsG0180001248.01.T01:three_prime_UTR 25.0%
! CAAAGAGAAATAGAAAAAGA+AGG - Chr1:18287947-18287966 None:intergenic 25.0%
! CAATTTAAAAACCAACCAAT+AGG - Chr1:18289661-18289680 None:intergenic 25.0%
! CACAATAATCCATCAATTAT+CGG + Chr1:18291288-18291307 MsG0180001248.01.T02:intron 25.0%
! CCTTAATTTCAAAACGAAAT+AGG + Chr1:18288574-18288593 MsG0180001248.01.T01:intron 25.0%
! GAAATTGATCAGAATTTGAA+TGG + Chr1:18292561-18292580 MsG0180001248.01.T02:CDS 25.0%
! GACATGATATAATTAGACAT+GGG + Chr1:18283961-18283980 MsG0180001248.01.T01:CDS 25.0%
! GATAATTAAGAGCTATTAGT+GGG + Chr1:18288981-18289000 MsG0180001248.01.T01:intron 25.0%
! GTTAACATCTAAATTGATCA+AGG - Chr1:18292511-18292530 None:intergenic 25.0%
! TAACATCTAAATTGATCAAG+GGG - Chr1:18292509-18292528 None:intergenic 25.0%
! TAATTCCTATAACCTAAACA+TGG - Chr1:18289410-18289429 None:intergenic 25.0%
! TAGGAATTATCTAGAGATAA+AGG + Chr1:18289421-18289440 MsG0180001248.01.T01:intron 25.0%
! TAGTTATGATAGACAAAAGA+TGG - Chr1:18287217-18287236 None:intergenic 25.0%
! TATTACTACAATCAAACTTC+TGG + Chr1:18284907-18284926 MsG0180001248.01.T01:intron 25.0%
! TCTAAACTTCATATATTACC+TGG + Chr1:18289762-18289781 MsG0180001248.01.T01:three_prime_UTR 25.0%
! TCTATTATATTAGTGGGATT+GGG - Chr1:18288232-18288251 None:intergenic 25.0%
! TCTGTTATAAAAATTACCCT+TGG - Chr1:18290224-18290243 None:intergenic 25.0%
! TGAAATGCTAAAATCAATGA+TGG - Chr1:18283509-18283528 None:intergenic 25.0%
! TGAAGGACTATTTAATATCA+TGG + Chr1:18291445-18291464 MsG0180001248.01.T02:intron 25.0%
! TGATAATTAAGAGCTATTAG+TGG + Chr1:18288980-18288999 MsG0180001248.01.T01:intron 25.0%
! TTAACAAATACCTTATGACA+TGG - Chr1:18292695-18292714 None:intergenic 25.0%
! TTCAAATTCTGATCAATTTC+TGG - Chr1:18292561-18292580 None:intergenic 25.0%
! TTCATTCCAAATTACATCAA+GGG - Chr1:18287662-18287681 None:intergenic 25.0%
! TTCTATTATATTAGTGGGAT+TGG - Chr1:18288233-18288252 None:intergenic 25.0%
! TTCTGGACAATATAATTTGA+TGG + Chr1:18284924-18284943 MsG0180001248.01.T01:intron 25.0%
! TTTCATTCCAAATTACATCA+AGG - Chr1:18287663-18287682 None:intergenic 25.0%
! TTTCCATGAATCAATGATTA+CGG + Chr1:18285128-18285147 MsG0180001248.01.T01:intron 25.0%
! TTTCGATAGAAAAGATGTTA+TGG - Chr1:18285576-18285595 None:intergenic 25.0%
!! AAGGAGAGTATATCAAATTA+AGG + Chr1:18284079-18284098 MsG0180001248.01.T01:intron 25.0%
!! AAGTTAATCTTTTCTATGGT+TGG + Chr1:18290246-18290265 MsG0180001248.01.T01:three_prime_UTR 25.0%
!! AATAAGTGATGTTTCTTTTC+AGG + Chr1:18289548-18289567 MsG0180001248.01.T01:intron 25.0%
!! AATTTGAATGGTTTTCTATG+TGG + Chr1:18292573-18292592 MsG0180001248.01.T02:CDS 25.0%
!! ACACAGATTTATGGATTAAA+CGG - Chr1:18289976-18289995 None:intergenic 25.0%
!! AGAAGAAGTTTCTTCTAAAA+TGG - Chr1:18292481-18292500 None:intergenic 25.0%
!! AGAGAATGGTTTTCAAATAA+TGG + Chr1:18289471-18289490 MsG0180001248.01.T01:intron 25.0%
!! AGGAGAGTATATCAAATTAA+GGG + Chr1:18284080-18284099 MsG0180001248.01.T01:intron 25.0%
!! AGTGATGAATTTTCTTTCTT+CGG + Chr1:18290506-18290525 MsG0180001248.01.T02:intron 25.0%
!! ATATGAAGTTTAGAATAGGA+TGG - Chr1:18289756-18289775 None:intergenic 25.0%
!! ATCAGTTTGTGAAGATTTTA+AGG + Chr1:18292740-18292759 MsG0180001248.01.T02:CDS 25.0%
!! ATCCTGATTTTCTAATTAAC+TGG - Chr1:18287056-18287075 None:intergenic 25.0%
!! ATTCTCATTTTACTGAATTG+TGG + Chr1:18285174-18285193 MsG0180001248.01.T01:intron 25.0%
!! ATTTGAATGGTTTTCTATGT+GGG + Chr1:18292574-18292593 MsG0180001248.01.T02:CDS 25.0%
!! ATTTTTGTAATAGATGCTAG+AGG - Chr1:18286255-18286274 None:intergenic 25.0%
!! CAAATGTCAAGTGAAAATTT+TGG + Chr1:18285017-18285036 MsG0180001248.01.T01:intron 25.0%
!! CAATTTATCAAGACTTTTAC+GGG + Chr1:18287513-18287532 MsG0180001248.01.T01:intron 25.0%
!! GAGAAAGTTAATCTTTTCTA+TGG + Chr1:18290242-18290261 MsG0180001248.01.T01:three_prime_UTR 25.0%
!! GATGGACTTATTGAATATTA+CGG - Chr1:18287199-18287218 None:intergenic 25.0%
!! GTAAGTTACACTTCAATTTT+TGG - Chr1:18291578-18291597 None:intergenic 25.0%
!! GTTTCATTTTCTCAATTTTG+TGG + Chr1:18283294-18283313 MsG0180001248.01.T01:CDS 25.0%
!! TAACATAACTCTTTTCGTAT+AGG - Chr1:18291421-18291440 None:intergenic 25.0%
!! TATGTTTAGGAAAACTGTTT+TGG + Chr1:18292929-18292948 MsG0180001248.01.T02:CDS 25.0%
!! TCTACCATATTTTCTACAAA+AGG - Chr1:18284014-18284033 None:intergenic 25.0%
!! TTCTCATTTTACTGAATTGT+GGG + Chr1:18285175-18285194 MsG0180001248.01.T01:intron 25.0%
!! TTTGGAGCGTTTATAAAATT+TGG + Chr1:18285035-18285054 MsG0180001248.01.T01:intron 25.0%
!! TTTGGTTAGTTACAAATTGT+TGG - Chr1:18292298-18292317 None:intergenic 25.0%
!! TTTTCTCATGGTTTCTTAAA+GGG + Chr1:18287828-18287847 MsG0180001248.01.T01:intron 25.0%
!!! AAGAAGTTTCTTCTAAAATG+GGG - Chr1:18292479-18292498 None:intergenic 25.0%
!!! ATATTTGTTTTCAAGAAACC+AGG + Chr1:18286784-18286803 MsG0180001248.01.T01:intron 25.0%
!!! ATGGGTTTTTTAGTTCATTA+AGG + Chr1:18290287-18290306 MsG0180001248.01.T01:three_prime_UTR 25.0%
!!! ATTTTTTTTGACAACTGCTA+TGG + Chr1:18285474-18285493 MsG0180001248.01.T01:intron 25.0%
!!! CATTTTACGTAGTTCTAATA+TGG + Chr1:18291106-18291125 MsG0180001248.01.T02:intron 25.0%
!!! CCTATTTCGTTTTGAAATTA+AGG - Chr1:18288577-18288596 None:intergenic 25.0%
!!! CTTAGATAAAAGTTCTAAAC+GGG + Chr1:18286348-18286367 MsG0180001248.01.T01:intron 25.0%
!!! GAAGAAGTTTCTTCTAAAAT+GGG - Chr1:18292480-18292499 None:intergenic 25.0%
!!! GGAACATTTAACTTTTATGT+AGG - Chr1:18286227-18286246 None:intergenic 25.0%
!!! GTTTAGTTTTCATCTTCTTT+CGG + Chr1:18283452-18283471 MsG0180001248.01.T01:intron 25.0%
!!! GTTTTACCTTTTTAAGATCA+TGG + Chr1:18284824-18284843 MsG0180001248.01.T01:intron 25.0%
!!! TAGAAAATCACTTTTTCCTT+GGG - Chr1:18285397-18285416 None:intergenic 25.0%
!!! TCATTTTGTGGTTGATATTA+TGG + Chr1:18287402-18287421 MsG0180001248.01.T01:three_prime_UTR 25.0%
!!! TTAGAAAATCACTTTTTCCT+TGG - Chr1:18285398-18285417 None:intergenic 25.0%
!!! TTCTAATATGGAAGTATTCA+TGG + Chr1:18291118-18291137 MsG0180001248.01.T02:intron 25.0%
!!! TTGCTTTATTGTTTTAAGGA+GGG - Chr1:18292052-18292071 None:intergenic 25.0%
!!! TTTAGTTCTGATAGTGAAAT+TGG + Chr1:18292861-18292880 MsG0180001248.01.T02:CDS 25.0%
!!! TTTGCTTTATTGTTTTAAGG+AGG - Chr1:18292053-18292072 None:intergenic 25.0%
!!! TTTTGTAGTTTGGTTTTGAT+GGG + Chr1:18284667-18284686 MsG0180001248.01.T01:intron 25.0%
!!! TTTTTGGGTAATAGTCATTT+TGG - Chr1:18291562-18291581 None:intergenic 25.0%
!!! TTTTTTTGTGTTCTCAATTG+TGG + Chr1:18289790-18289809 MsG0180001248.01.T01:intron 25.0%
AAATCAGTGATACTACAAGT+GGG - Chr1:18288083-18288102 None:intergenic 30.0%
AACATCTAAATTGATCAAGG+GGG - Chr1:18292508-18292527 None:intergenic 30.0%
AAGATAAAGTGACAACATAC+AGG - Chr1:18286024-18286043 None:intergenic 30.0%
AAGTTTGCATGGAAAAACTT+TGG - Chr1:18292438-18292457 None:intergenic 30.0%
AATATGGTAGAAACATAGCT+TGG + Chr1:18284023-18284042 MsG0180001248.01.T01:intron 30.0%
AATGAATAAGACCAAAGAGA+AGG - Chr1:18290081-18290100 None:intergenic 30.0%
AATTGAGTTACGAATGCATA+GGG - Chr1:18283137-18283156 None:intergenic 30.0%
AATTGCAACATGAATCTTGA+TGG + Chr1:18290974-18290993 MsG0180001248.01.T02:intron 30.0%
ACTTCATATATTACCTGGTA+AGG + Chr1:18289767-18289786 MsG0180001248.01.T01:intron 30.0%
AGAAGTTTAATCCTAAGAGA+GGG + Chr1:18286650-18286669 MsG0180001248.01.T01:intron 30.0%
AGACATTACTGTTCCAATTA+TGG - Chr1:18290440-18290459 None:intergenic 30.0%
AGATCTCAAGATTAATGAGT+TGG + Chr1:18284163-18284182 MsG0180001248.01.T01:intron 30.0%
AGATTATTACCAGGTAAGTT+TGG + Chr1:18284595-18284614 MsG0180001248.01.T01:exon 30.0%
AGATTGAAAATACCGAGAAA+AGG + Chr1:18290157-18290176 MsG0180001248.01.T01:three_prime_UTR 30.0%
AGCATATCACAAAACATTAG+CGG - Chr1:18283822-18283841 None:intergenic 30.0%
AGCATGTCTAGTAATATGTT+CGG + Chr1:18284952-18284971 MsG0180001248.01.T01:intron 30.0%
ATAATAGACACCTGATATTG+TGG + Chr1:18288693-18288712 MsG0180001248.01.T01:intron 30.0%
ATATATGTACACCTTCCATT+CGG - Chr1:18290878-18290897 None:intergenic 30.0%
ATATCAGGTGTCTATTATTC+TGG - Chr1:18288691-18288710 None:intergenic 30.0%
ATATCCTAACTAGATCCAAA+AGG - Chr1:18289872-18289891 None:intergenic 30.0%
ATATGGTAGAAACATAGCTT+GGG + Chr1:18284024-18284043 MsG0180001248.01.T01:intron 30.0%
ATCTAGCCAAATTTAACTAG+TGG - Chr1:18285861-18285880 None:intergenic 30.0%
ATCTTCAACAGTTGAATACA+TGG + Chr1:18292087-18292106 MsG0180001248.01.T02:intron 30.0%
ATGTAATGAGCAACCATAAT+TGG + Chr1:18290424-18290443 MsG0180001248.01.T01:three_prime_UTR 30.0%
ATTTCACCAGTTTCCTTATA+GGG - Chr1:18289046-18289065 None:intergenic 30.0%
CAACATCCATGATCTTAAAA+AGG - Chr1:18284833-18284852 None:intergenic 30.0%
CAAGATACCAATCACATATT+AGG + Chr1:18287701-18287720 MsG0180001248.01.T01:intron 30.0%
CAATAATTAAAACCTTGCTG+AGG + Chr1:18285213-18285232 MsG0180001248.01.T01:intron 30.0%
CGTTAAGATCTTTGTAATTG+AGG + Chr1:18289248-18289267 MsG0180001248.01.T01:intron 30.0%
CTGGTAGCTTATACTAATAT+CGG - Chr1:18290815-18290834 None:intergenic 30.0%
CTTAGTAACAAGTACAATGT+TGG - Chr1:18290579-18290598 None:intergenic 30.0%
GAAAGTTACTTAGAAACATC+TGG + Chr1:18286575-18286594 MsG0180001248.01.T01:intron 30.0%
GAAATTTACATTACTGTCAC+TGG - Chr1:18289294-18289313 None:intergenic 30.0%
GAATATAAACATGTCAGATG+AGG - Chr1:18288338-18288357 None:intergenic 30.0%
GAATGAAACTTATTGCATCT+AGG + Chr1:18287675-18287694 MsG0180001248.01.T01:intron 30.0%
GAATTATCTAGAGATAAAGG+AGG + Chr1:18289424-18289443 MsG0180001248.01.T01:intron 30.0%
GAATTTGACAGAGTGATTAA+TGG + Chr1:18290700-18290719 MsG0180001248.01.T02:intron 30.0%
GACTAACATAGTGTACAATT+AGG - Chr1:18291327-18291346 None:intergenic 30.0%
GTAAAGAACAGGGTTTAATA+TGG + Chr1:18284447-18284466 MsG0180001248.01.T01:intron 30.0%
GTAATGTTAGAATCCTCAAA+TGG - Chr1:18285300-18285319 None:intergenic 30.0%
TAAGATTGAATAGGATGAGA+AGG - Chr1:18283106-18283125 None:intergenic 30.0%
TAAGTTTCACGTGTTTAGTT+TGG - Chr1:18286321-18286340 None:intergenic 30.0%
TAATTGAGTTACGAATGCAT+AGG - Chr1:18283138-18283157 None:intergenic 30.0%
TAGAAAAGATGTTATGGTTG+TGG - Chr1:18285570-18285589 None:intergenic 30.0%
TAGTACAATGTGTTGTCAAA+TGG + Chr1:18283845-18283864 MsG0180001248.01.T01:intron 30.0%
TATATCACATAAAACCCCAT+AGG - Chr1:18283603-18283622 None:intergenic 30.0%
TATCCTAACTAGATCCAAAA+GGG - Chr1:18289871-18289890 None:intergenic 30.0%
TATGGACATGAAGAGTTTAA+AGG - Chr1:18285354-18285373 None:intergenic 30.0%
TATTTGTATACTACAAGCTG+TGG - Chr1:18288483-18288502 None:intergenic 30.0%
TCAATTAGTTACTAACTGAC+TGG - Chr1:18290834-18290853 None:intergenic 30.0%
TCATTCCAAATTACATCAAG+GGG - Chr1:18287661-18287680 None:intergenic 30.0%
TCCTTGGAAGTTTATTTGTT+AGG + Chr1:18287734-18287753 MsG0180001248.01.T01:intron 30.0%
TCTAAACAAAGATCTTACAC+TGG + Chr1:18285413-18285432 MsG0180001248.01.T01:intron 30.0%
TCTCATCCTATTCAATCTTA+GGG + Chr1:18283106-18283125 MsG0180001248.01.T01:intron 30.0%
TGCCAGTTAATTAGAAAATC+AGG + Chr1:18287051-18287070 MsG0180001248.01.T01:intron 30.0%
TGGAAATATTACCTTCTCTT+TGG + Chr1:18290067-18290086 MsG0180001248.01.T01:three_prime_UTR 30.0%
TGGATTGATATGGAATAGTT+TGG + Chr1:18285082-18285101 MsG0180001248.01.T01:intron 30.0%
TTAAAGATATCAAATCTGCG+CGG + Chr1:18287119-18287138 MsG0180001248.01.T01:intron 30.0%
TTAGTTATAAGCACGTGAAA+GGG - Chr1:18286740-18286759 None:intergenic 30.0%
TTATCGTAGAACCTTAAGAT+GGG + Chr1:18283651-18283670 MsG0180001248.01.T01:intron 30.0%
TTATTTGGGTAAGAGTTCTT+TGG + Chr1:18288953-18288972 MsG0180001248.01.T01:intron 30.0%
TTCTCATCCTATTCAATCTT+AGG + Chr1:18283105-18283124 MsG0180001248.01.T01:intron 30.0%
TTGGATCTAGTTAGGATATT+GGG + Chr1:18289873-18289892 MsG0180001248.01.T01:intron 30.0%
TTTAGTTATAAGCACGTGAA+AGG - Chr1:18286741-18286760 None:intergenic 30.0%
TTTATACAGACATCATGTGT+TGG - Chr1:18287244-18287263 None:intergenic 30.0%
TTTATCGTAGAACCTTAAGA+TGG + Chr1:18283650-18283669 MsG0180001248.01.T01:intron 30.0%
TTTGGATCTAGTTAGGATAT+TGG + Chr1:18289872-18289891 MsG0180001248.01.T01:intron 30.0%
! AACAAGTACAATGTTGGTAA+TGG - Chr1:18290573-18290592 None:intergenic 30.0%
! AAGAGTTATGTTAGCATTGA+AGG + Chr1:18291428-18291447 MsG0180001248.01.T02:intron 30.0%
! AAGATGCTATTTGCATGTTA+TGG + Chr1:18292992-18293011 MsG0180001248.01.T02:CDS 30.0%
! AAGTTTCACGTGTTTAGTTT+GGG - Chr1:18286320-18286339 None:intergenic 30.0%
! ACCACCTTTTGTAGAAAATA+TGG + Chr1:18284007-18284026 MsG0180001248.01.T01:CDS 30.0%
! ACCATATTTTCTACAAAAGG+TGG - Chr1:18284011-18284030 None:intergenic 30.0%
! AGACTTTATTTAAGGGCTAA+TGG + Chr1:18291233-18291252 MsG0180001248.01.T02:intron 30.0%
! ATGTATGTCAGATCATTTTG+TGG + Chr1:18287390-18287409 MsG0180001248.01.T01:three_prime_UTR 30.0%
! CAAAATTGATTCCTATTGGT+TGG + Chr1:18289647-18289666 MsG0180001248.01.T01:intron 30.0%
! CCTTGGAAGTTTATTTGTTA+GGG + Chr1:18287735-18287754 MsG0180001248.01.T01:intron 30.0%
! GGAAAAACTTTGGATTAGAA+GGG - Chr1:18292428-18292447 None:intergenic 30.0%
! GTGGATTTTTGCATTGTATT+TGG - Chr1:18288464-18288483 None:intergenic 30.0%
! GTTTTCTCATGGTTTCTTAA+AGG + Chr1:18287827-18287846 MsG0180001248.01.T01:intron 30.0%
! TCACTAAGCCTATTAATTTG+TGG - Chr1:18286697-18286716 None:intergenic 30.0%
! TCTCATTTTACTGAATTGTG+GGG + Chr1:18285176-18285195 MsG0180001248.01.T01:intron 30.0%
! TCTGTTTTCTTCTTTTGTCT+TGG + Chr1:18284640-18284659 MsG0180001248.01.T01:three_prime_UTR 30.0%
! TGCATTGTATTTGGATTTTG+AGG - Chr1:18288455-18288474 None:intergenic 30.0%
! TGGAAAAACTTTGGATTAGA+AGG - Chr1:18292429-18292448 None:intergenic 30.0%
! TTAAGGGCTAATGGTTATTT+TGG + Chr1:18291242-18291261 MsG0180001248.01.T02:intron 30.0%
! TTTCAATCTTTTCAGCGAAT+CGG - Chr1:18290146-18290165 None:intergenic 30.0%
!! AGAAGTTTCTTCTAAAATGG+GGG - Chr1:18292478-18292497 None:intergenic 30.0%
!! GACTATTTGGTTTGACTTAT+TGG + Chr1:18290852-18290871 MsG0180001248.01.T02:intron 30.0%
!! GTAACTAACCAAACTTGTTA+TGG + Chr1:18292305-18292324 MsG0180001248.01.T02:intron 30.0%
!! GTATGTTGTCACTTTATCTT+TGG + Chr1:18286024-18286043 MsG0180001248.01.T01:intron 30.0%
!! TATCCGTAATCATTGATTCA+TGG - Chr1:18285134-18285153 None:intergenic 30.0%
!! TGATAGTGAAATTGGTGTTT+TGG + Chr1:18292869-18292888 MsG0180001248.01.T02:CDS 30.0%
!! TGGTTTAACGTTGATTTCAT+TGG - Chr1:18292675-18292694 None:intergenic 30.0%
!! TTTCCTTATCAGAAGTGTTA+TGG + Chr1:18289602-18289621 MsG0180001248.01.T01:three_prime_UTR 30.0%
!! TTTTGTGGTTGATATTATGG+TGG + Chr1:18287405-18287424 MsG0180001248.01.T01:three_prime_UTR 30.0%
!!! AGTCATTATTTTTTGTCCCA+AGG + Chr1:18285378-18285397 MsG0180001248.01.T01:intron 30.0%
!!! CGTAGACATTTTTGCTTTTT+TGG - Chr1:18292146-18292165 None:intergenic 30.0%
!!! CTTTGGTCTTATTCATTTTG+AGG + Chr1:18290084-18290103 MsG0180001248.01.T01:three_prime_UTR 30.0%
!!! GTTTTGTAGTTTGGTTTTGA+TGG + Chr1:18284666-18284685 MsG0180001248.01.T01:intron 30.0%
!!! TCGTGTTTTTGGTATATTAG+CGG + Chr1:18289222-18289241 MsG0180001248.01.T01:intron 30.0%
!!! TGCTTCTGTTGTTTTTCATT+TGG - Chr1:18290609-18290628 None:intergenic 30.0%
AAAAGAATCTTGTGTGCCAT+TGG + Chr1:18287264-18287283 MsG0180001248.01.T01:intron 35.0%
AAAAGGGTAAGAGGAATAGT+GGG - Chr1:18290027-18290046 None:intergenic 35.0%
AAACCATGAGAAAACATTCG+AGG - Chr1:18287822-18287841 None:intergenic 35.0%
AAAGATGTTATGGTTGTGGA+TGG - Chr1:18285566-18285585 None:intergenic 35.0%
AAAGCTAGTTCATGCTTCTT+TGG - Chr1:18292612-18292631 None:intergenic 35.0%
AAATGTTAGAATCCTCAGCA+AGG - Chr1:18285228-18285247 None:intergenic 35.0%
AACCATTAAGTGAACTGTGA+AGG + Chr1:18288892-18288911 MsG0180001248.01.T01:intron 35.0%
AAGGGTAGTCAAATCACTAA+AGG + Chr1:18284098-18284117 MsG0180001248.01.T01:intron 35.0%
AATGATGAAGCTATAAGCGT+GGG - Chr1:18286098-18286117 None:intergenic 35.0%
AATTAAGTCAGACTGGGAAA+AGG - Chr1:18290958-18290977 None:intergenic 35.0%
AATTCCAGCAAATCTGAACA+AGG - Chr1:18290685-18290704 None:intergenic 35.0%
ACAGTATATTGATCTTGAGC+TGG - Chr1:18286395-18286414 None:intergenic 35.0%
AGTCTACACAAAACCAGATA+GGG - Chr1:18288106-18288125 None:intergenic 35.0%
AGTGACAAAGCTTGTATCAT+GGG + Chr1:18290269-18290288 MsG0180001248.01.T01:three_prime_UTR 35.0%
ATATGGAATAGTTTGGCACT+AGG + Chr1:18285089-18285108 MsG0180001248.01.T01:intron 35.0%
ATCCTAACTAGATCCAAAAG+GGG - Chr1:18289870-18289889 None:intergenic 35.0%
ATGTCAGATGAGGGTAATTT+AGG - Chr1:18288328-18288347 None:intergenic 35.0%
ATGTTGCAATTAAGTCAGAC+TGG - Chr1:18290965-18290984 None:intergenic 35.0%
ATTACGATTCTTTGCATGCA+CGG + Chr1:18286916-18286935 MsG0180001248.01.T01:intron 35.0%
CAACGTTAAACCATGTCATA+AGG + Chr1:18292682-18292701 MsG0180001248.01.T02:CDS 35.0%
CAACTGCATTTATCCATTTG+AGG + Chr1:18285284-18285303 MsG0180001248.01.T01:intron 35.0%
CAATTGAGAGTTCCAGAATA+TGG + Chr1:18283253-18283272 MsG0180001248.01.T01:CDS 35.0%
CCAATCTGAAGAACATGAAA+TGG - Chr1:18292331-18292350 None:intergenic 35.0%
CCATTTCATGTTCTTCAGAT+TGG + Chr1:18292328-18292347 MsG0180001248.01.T02:intron 35.0%
CCCTAACAAATAAACTTCCA+AGG - Chr1:18287738-18287757 None:intergenic 35.0%
CTATCTGCAGTCCAAATAAT+CGG + Chr1:18288266-18288285 MsG0180001248.01.T01:intron 35.0%
CTCAAATGGATAAATGCAGT+TGG - Chr1:18285286-18285305 None:intergenic 35.0%
CTCCTTACCACAAAATCTAT+AGG - Chr1:18284065-18284084 None:intergenic 35.0%
CTTTACAACATATGCACTTC+TGG + Chr1:18284557-18284576 MsG0180001248.01.T01:CDS 35.0%
GAAATCAGTGATACTACAAG+TGG - Chr1:18288084-18288103 None:intergenic 35.0%
GAACACAAAAAAACCTTACC+AGG - Chr1:18289783-18289802 None:intergenic 35.0%
GAAGAACCCTAAGATTGAAT+AGG - Chr1:18283115-18283134 None:intergenic 35.0%
GACGGTTTCCACAAATTAAT+AGG + Chr1:18286686-18286705 MsG0180001248.01.T01:intron 35.0%
GAGAAAATGAAACACCTTCT+GGG - Chr1:18283287-18283306 None:intergenic 35.0%
GAGAAGTTTAATCCTAAGAG+AGG + Chr1:18286649-18286668 MsG0180001248.01.T01:intron 35.0%
GAGATATATAGCCTAGATCA+CGG - Chr1:18289330-18289349 None:intergenic 35.0%
GATCTTGCAATGAACAGTAT+TGG - Chr1:18285886-18285905 None:intergenic 35.0%
GATTTCACCAGTTTCCTTAT+AGG - Chr1:18289047-18289066 None:intergenic 35.0%
GCAAAGAATCGTAATTTGGT+GGG - Chr1:18286911-18286930 None:intergenic 35.0%
GCACATCAAGTAAGATATGT+TGG - Chr1:18284524-18284543 None:intergenic 35.0%
GCATGCAAAGAATCGTAATT+TGG - Chr1:18286915-18286934 None:intergenic 35.0%
GCATTTCTTTGAGTGTACTT+TGG + Chr1:18283544-18283563 MsG0180001248.01.T01:intron 35.0%
GGCAAGACAAGATATATAGA+AGG + Chr1:18289368-18289387 MsG0180001248.01.T01:intron 35.0%
GTACACCACCTTAAAATTCA+AGG - Chr1:18286498-18286517 None:intergenic 35.0%
GTTGTAAAGAAAGCAAGACT+TGG - Chr1:18284546-18284565 None:intergenic 35.0%
TAATGATGAAGCTATAAGCG+TGG - Chr1:18286099-18286118 None:intergenic 35.0%
TAATTAGGCTAAATCCCTAG+TGG - Chr1:18289076-18289095 None:intergenic 35.0%
TACAATGTGTTGTCAAATGG+CGG + Chr1:18283848-18283867 MsG0180001248.01.T01:intron 35.0%
TAGTCTACACAAAACCAGAT+AGG - Chr1:18288107-18288126 None:intergenic 35.0%
TAGTTATAAGCACGTGAAAG+GGG - Chr1:18286739-18286758 None:intergenic 35.0%
TATCAACGATCCACAATATC+AGG - Chr1:18288706-18288725 None:intergenic 35.0%
TCACCATAACACTTCTGATA+AGG - Chr1:18289608-18289627 None:intergenic 35.0%
TCCATAAATCTGTGTTTGTG+TGG + Chr1:18289981-18290000 MsG0180001248.01.T01:intron 35.0%
TGAAATGGCCATAACAAGTT+TGG - Chr1:18292316-18292335 None:intergenic 35.0%
TGAGAAAATGAAACACCTTC+TGG - Chr1:18283288-18283307 None:intergenic 35.0%
TGCAAAAACATTTAGCACAG+AGG - Chr1:18284703-18284722 None:intergenic 35.0%
TGCAAAGAATCGTAATTTGG+TGG - Chr1:18286912-18286931 None:intergenic 35.0%
TGCTGTCATTGCGTTATTTA+AGG - Chr1:18285612-18285631 None:intergenic 35.0%
TGCTTTGTGACTTTGTCTAA+TGG + Chr1:18290376-18290395 MsG0180001248.01.T01:three_prime_UTR 35.0%
TGGAAAGGTAAATGAGAGAA+TGG + Chr1:18289457-18289476 MsG0180001248.01.T01:intron 35.0%
TGGTTGAGATATCCTTAGTT+TGG + Chr1:18292215-18292234 MsG0180001248.01.T02:intron 35.0%
TGTTGCAATTAAGTCAGACT+GGG - Chr1:18290964-18290983 None:intergenic 35.0%
TGTTGGAATAGGTAATTGAG+TGG + Chr1:18289005-18289024 MsG0180001248.01.T01:intron 35.0%
TTACCAGGTAAGTTTGGTAT+TGG + Chr1:18284601-18284620 MsG0180001248.01.T01:exon 35.0%
TTACTTAGAAACATCTGGGA+AGG + Chr1:18286580-18286599 MsG0180001248.01.T01:intron 35.0%
TTAGAACAAGTAGCAGTATC+AGG - Chr1:18292780-18292799 None:intergenic 35.0%
TTAGAGTGTGTACAAATGAG+TGG - Chr1:18289199-18289218 None:intergenic 35.0%
TTCACAGTTCACTTAATGGT+TGG - Chr1:18288893-18288912 None:intergenic 35.0%
TTGTGACTTTGTCTAATGGT+TGG + Chr1:18290380-18290399 MsG0180001248.01.T01:three_prime_UTR 35.0%
TTTCACCAGTTTCCTTATAG+GGG - Chr1:18289045-18289064 None:intergenic 35.0%
! AAAAGTGTGAAAAGGGTAAG+AGG - Chr1:18290036-18290055 None:intergenic 35.0%
! AAGCCTTTTCTAACAAAGCT+AGG + Chr1:18285951-18285970 MsG0180001248.01.T01:intron 35.0%
! ACGGGTTTTGCTAAGTAATA+TGG + Chr1:18287531-18287550 MsG0180001248.01.T01:intron 35.0%
! ACTGCAACAAAAGTGTGAAA+AGG - Chr1:18290044-18290063 None:intergenic 35.0%
! AGGACATAACTGATAACGAT+AGG - Chr1:18287147-18287166 None:intergenic 35.0%
! AGTTTATTTGTTAGGGCCTT+AGG + Chr1:18287742-18287761 MsG0180001248.01.T01:intron 35.0%
! CACTCTAAATGTCGTGTTTT+TGG + Chr1:18289211-18289230 MsG0180001248.01.T01:intron 35.0%
! CAGGATCTGTTGTTTGTTAA+GGG + Chr1:18287070-18287089 MsG0180001248.01.T01:intron 35.0%
! CTCATTTTACTGAATTGTGG+GGG + Chr1:18285177-18285196 MsG0180001248.01.T01:intron 35.0%
! CTGCAACAAAAGTGTGAAAA+GGG - Chr1:18290043-18290062 None:intergenic 35.0%
! GACCTATAGATTTTGTGGTA+AGG + Chr1:18284060-18284079 MsG0180001248.01.T01:intron 35.0%
! GACTGAGGAGAGAATAATTT+TGG - Chr1:18288433-18288452 None:intergenic 35.0%
! GAGAAGACCTATAGATTTTG+TGG + Chr1:18284055-18284074 MsG0180001248.01.T01:intron 35.0%
! GATTTCATTGGTCTAAACTC+TGG - Chr1:18292663-18292682 None:intergenic 35.0%
! GGTATCAGAGCTTATCTTTT+TGG + Chr1:18289172-18289191 MsG0180001248.01.T01:intron 35.0%
! GTTTATTTGTTAGGGCCTTA+GGG + Chr1:18287743-18287762 MsG0180001248.01.T01:intron 35.0%
! TAGAGATAAGTTGAGTCTTG+AGG - Chr1:18287167-18287186 None:intergenic 35.0%
! TCAGGATCTGTTGTTTGTTA+AGG + Chr1:18287069-18287088 MsG0180001248.01.T01:intron 35.0%
! TCATGGTTCTATCCAAACTA+AGG - Chr1:18292230-18292249 None:intergenic 35.0%
! TCTTCCCATGTTTAGGTTAT+AGG + Chr1:18289402-18289421 MsG0180001248.01.T01:intron 35.0%
! TTCAATCTTTTCAGCGAATC+GGG - Chr1:18290145-18290164 None:intergenic 35.0%
! TTTATTTGTTAGGGCCTTAG+GGG + Chr1:18287744-18287763 MsG0180001248.01.T01:intron 35.0%
! TTTCACACTTTTGTTGCAGT+TGG + Chr1:18290044-18290063 MsG0180001248.01.T01:intron 35.0%
!! AAAAGTACCGCATAAGCTTA+AGG + Chr1:18283622-18283641 MsG0180001248.01.T01:intron 35.0%
!! ATTCTGATCAATTTCTGGCT+TGG - Chr1:18292556-18292575 None:intergenic 35.0%
!! GAACCTAGCTTTGTTAGAAA+AGG - Chr1:18285957-18285976 None:intergenic 35.0%
!! GCTATTTTCTTCCCATGTTT+AGG + Chr1:18289395-18289414 MsG0180001248.01.T01:intron 35.0%
!! GGAGTAACTTGTTAAATGGA+AGG - Chr1:18286077-18286096 None:intergenic 35.0%
!! GTAACTTGTTAAATGGAAGG+AGG - Chr1:18286074-18286093 None:intergenic 35.0%
!! TATTTGGATTTTGAGGACTG+AGG - Chr1:18288448-18288467 None:intergenic 35.0%
!! TCTGTGCTAAATGTTTTTGC+AGG + Chr1:18284702-18284721 MsG0180001248.01.T01:intron 35.0%
!! TCTTGGTGTGTTTTGTAGTT+TGG + Chr1:18284657-18284676 MsG0180001248.01.T01:intron 35.0%
!! TGATCTTCTAGTTTCACAGT+CGG + Chr1:18288863-18288882 MsG0180001248.01.T01:intron 35.0%
!! TGCAATGTGTACCGATTATT+TGG - Chr1:18288280-18288299 None:intergenic 35.0%
!! TTCTGTTAGAGTACTGGTAT+TGG + Chr1:18287772-18287791 MsG0180001248.01.T01:intron 35.0%
!! TTTTCTATGTGGGTTGTTTG+AGG + Chr1:18292584-18292603 MsG0180001248.01.T02:CDS 35.0%
!!! AGTGATGTTTCTTTTCAGGT+TGG + Chr1:18289552-18289571 MsG0180001248.01.T01:intron 35.0%
!!! CGTGTTTTTGGTATATTAGC+GGG + Chr1:18289223-18289242 MsG0180001248.01.T01:intron 35.0%
!!! GAATAGGTTTTGCTGTTGTT+TGG - Chr1:18291002-18291021 None:intergenic 35.0%
!!! TGTACTTTGGTTTTGAACTC+CGG + Chr1:18283557-18283576 MsG0180001248.01.T01:intron 35.0%
AAACGCGAACCTTAATGTGA+TGG + Chr1:18289729-18289748 MsG0180001248.01.T01:three_prime_UTR 40.0%
AACCCTTGGAAGGACTAATT+AGG - Chr1:18289091-18289110 None:intergenic 40.0%
AAGAAGCTGAGAAGTTTGCA+TGG - Chr1:18292449-18292468 None:intergenic 40.0%
AATCTCAAAAGCTAGCTCAG+GGG - Chr1:18289126-18289145 None:intergenic 40.0%
ACTCCAATACCAAACTTACC+TGG - Chr1:18284607-18284626 None:intergenic 40.0%
ACTGGAGTATGTAGAAATGC+GGG - Chr1:18289276-18289295 None:intergenic 40.0%
ACTTCCAAAAGCAGAACCAA+AGG - Chr1:18292895-18292914 None:intergenic 40.0%
AGAAATTCTCAACCCTTGGA+AGG - Chr1:18289101-18289120 None:intergenic 40.0%
AGCCTAATTAGTCCTTCCAA+GGG + Chr1:18289086-18289105 MsG0180001248.01.T01:intron 40.0%
AGCCTTCACAGTTCACTTAA+TGG - Chr1:18288897-18288916 None:intergenic 40.0%
AGTCCAGTGTTGTCAAATAG+CGG + Chr1:18283770-18283789 MsG0180001248.01.T01:intron 40.0%
AGTGGCAATATGCAATCATC+AGG - Chr1:18285843-18285862 None:intergenic 40.0%
AGTTATAAGCACGTGAAAGG+GGG - Chr1:18286738-18286757 None:intergenic 40.0%
ATCGACCTCTTGCTAATAGA+AGG - Chr1:18288826-18288845 None:intergenic 40.0%
ATTAGAAGGGAAATGACACG+TGG - Chr1:18292415-18292434 None:intergenic 40.0%
ATTAGACATGGGGACATTAG+AGG + Chr1:18283972-18283991 MsG0180001248.01.T01:CDS 40.0%
ATTAGGCTCATGCAATTCCT+TGG + Chr1:18287718-18287737 MsG0180001248.01.T01:intron 40.0%
ATTCATCAAGCTAGAACCAC+TGG - Chr1:18290751-18290770 None:intergenic 40.0%
ATTTGGCGACTGGATTGATA+TGG + Chr1:18285072-18285091 MsG0180001248.01.T01:intron 40.0%
CAAACTATGGTACTGTCTAC+AGG + Chr1:18286418-18286437 MsG0180001248.01.T01:intron 40.0%
CAACTCCCCTTGATGTAATT+TGG + Chr1:18287653-18287672 MsG0180001248.01.T01:intron 40.0%
CAATCTCAAAAGCTAGCTCA+GGG - Chr1:18289127-18289146 None:intergenic 40.0%
CACCACCTTAAAATTCAAGG+TGG - Chr1:18286495-18286514 None:intergenic 40.0%
CACCTTAAAATTCAAGGTGG+TGG - Chr1:18286492-18286511 None:intergenic 40.0%
CACTGGAGTATGTAGAAATG+CGG - Chr1:18289277-18289296 None:intergenic 40.0%
CAGCTCCACTTAGTATGATA+AGG + Chr1:18284237-18284256 MsG0180001248.01.T01:intron 40.0%
CATACCTTGTTCAGATTTGC+TGG + Chr1:18290678-18290697 MsG0180001248.01.T02:intron 40.0%
CCAACGCAACATTCTAATCT+CGG - Chr1:18283740-18283759 None:intergenic 40.0%
CCACTTAGTATGATAAGGCT+TGG + Chr1:18284242-18284261 MsG0180001248.01.T01:intron 40.0%
CCTCTTGCTAATAGAAGGTA+AGG - Chr1:18288821-18288840 None:intergenic 40.0%
CCTTACCTTCTATTAGCAAG+AGG + Chr1:18288818-18288837 MsG0180001248.01.T01:intron 40.0%
CGTACTAGTCATTCTGTCTA+AGG + Chr1:18287439-18287458 MsG0180001248.01.T01:three_prime_UTR 40.0%
CTAAGGATATCTCAACCATG+TGG - Chr1:18292213-18292232 None:intergenic 40.0%
CTAGTTAGGATATTGGGTGT+GGG + Chr1:18289879-18289898 MsG0180001248.01.T01:intron 40.0%
CTCATCACACAACAGAATAG+CGG + Chr1:18289347-18289366 MsG0180001248.01.T01:intron 40.0%
CTTATCATACTAAGTGGAGC+TGG - Chr1:18284239-18284258 None:intergenic 40.0%
GAAAAGGGTAAGAGGAATAG+TGG - Chr1:18290028-18290047 None:intergenic 40.0%
GAGTGACAAAGCTTGTATCA+TGG + Chr1:18290268-18290287 MsG0180001248.01.T01:three_prime_UTR 40.0%
GATCATGATCGTAGAGACAA+AGG + Chr1:18285902-18285921 MsG0180001248.01.T01:intron 40.0%
GATTAACAAAGTGCACAACC+AGG + Chr1:18291476-18291495 MsG0180001248.01.T02:intron 40.0%
GCACATTTCTGTTAGAGTAC+TGG + Chr1:18287766-18287785 MsG0180001248.01.T01:intron 40.0%
GCATGAGCCTAATATGTGAT+TGG - Chr1:18287711-18287730 None:intergenic 40.0%
GCCACACAAACACAGATTTA+TGG - Chr1:18289985-18290004 None:intergenic 40.0%
GCTTTCCTGTTGAATCCAAA+GGG + Chr1:18288143-18288162 MsG0180001248.01.T01:three_prime_UTR 40.0%
GGAATTACGTACAAGTTGTG+TGG - Chr1:18286299-18286318 None:intergenic 40.0%
GGATCATGCAGATTCTTAGA+TGG + Chr1:18289151-18289170 MsG0180001248.01.T01:intron 40.0%
GTGAAATCACACATCCACTA+GGG + Chr1:18289059-18289078 MsG0180001248.01.T01:intron 40.0%
GTGGCTATATTAACTCCACA+TGG + Chr1:18292195-18292214 MsG0180001248.01.T02:intron 40.0%
TAAGGGTCTGTTAACAGTTC+AGG + Chr1:18287087-18287106 MsG0180001248.01.T01:intron 40.0%
TAATAACTGCCACCATAGCA+GGG + Chr1:18288753-18288772 MsG0180001248.01.T01:intron 40.0%
TAATAGATGCTAGAGGTGAC+TGG - Chr1:18286248-18286267 None:intergenic 40.0%
TAGCCTAATTAGTCCTTCCA+AGG + Chr1:18289085-18289104 MsG0180001248.01.T01:intron 40.0%
TAGGATGGTCCATCACATTA+AGG - Chr1:18289741-18289760 None:intergenic 40.0%
TATTGTGTGATACCACGCTT+TGG - Chr1:18290119-18290138 None:intergenic 40.0%
TCAATCTCAAAAGCTAGCTC+AGG - Chr1:18289128-18289147 None:intergenic 40.0%
TCTAGTTAGGATATTGGGTG+TGG + Chr1:18289878-18289897 MsG0180001248.01.T01:intron 40.0%
TCTTCTTTCGGAATGTACAG+AGG + Chr1:18283464-18283483 MsG0180001248.01.T01:intron 40.0%
TGAGAGTTCCAGAATATGGT+TGG + Chr1:18283257-18283276 MsG0180001248.01.T01:CDS 40.0%
TGCTGTATGAGATAGAGTGT+TGG + Chr1:18283677-18283696 MsG0180001248.01.T01:intron 40.0%
TGGATGCAACAGCGTTTATT+TGG + Chr1:18285055-18285074 MsG0180001248.01.T01:intron 40.0%
TGGGAAAAGGAAAAGATGAG+TGG - Chr1:18290945-18290964 None:intergenic 40.0%
TGGTATACATGTTGCAACAG+CGG + Chr1:18287551-18287570 MsG0180001248.01.T01:intron 40.0%
TGTTGTGGTTTATGCTGTTC+AGG + Chr1:18284774-18284793 MsG0180001248.01.T01:intron 40.0%
TTAATCCTAAGAGAGGGAGT+AGG + Chr1:18286656-18286675 MsG0180001248.01.T01:intron 40.0%
TTACCCAATGTTGTCAACCA+CGG - Chr1:18283936-18283955 None:intergenic 40.0%
TTAGAAGGGAAATGACACGT+GGG - Chr1:18292414-18292433 None:intergenic 40.0%
TTAGACATGGGGACATTAGA+GGG + Chr1:18283973-18283992 MsG0180001248.01.T01:CDS 40.0%
TTCACCAGTTTCCTTATAGG+GGG - Chr1:18289044-18289063 None:intergenic 40.0%
TTGTGGTCGAGACATAATCA+TGG - Chr1:18292247-18292266 None:intergenic 40.0%
! AGTCCTCGAATGTTTTCTCA+TGG + Chr1:18287816-18287835 MsG0180001248.01.T01:intron 40.0%
! CACACAGCTCGATTCATTTT+TGG + Chr1:18284853-18284872 MsG0180001248.01.T01:intron 40.0%
! CCAAGCCTTATCATACTAAG+TGG - Chr1:18284245-18284264 None:intergenic 40.0%
! CTCAATTTTGTGGTGAATGC+AGG + Chr1:18283304-18283323 MsG0180001248.01.T01:CDS 40.0%
! CTCCACCACCTTGAATTTTA+AGG + Chr1:18286487-18286506 MsG0180001248.01.T01:intron 40.0%
! GAAATCAAGCAGTGTTGCTA+TGG + Chr1:18292965-18292984 MsG0180001248.01.T02:CDS 40.0%
! GAAGAGTACAGTCAAGATCA+CGG - Chr1:18287002-18287021 None:intergenic 40.0%
! GCAGCAGTTTTACTTTCACT+AGG - Chr1:18285690-18285709 None:intergenic 40.0%
! GCTGTATGAGATAGAGTGTT+GGG + Chr1:18283678-18283697 MsG0180001248.01.T01:intron 40.0%
! GCTTTAAGTGCAAAACTGGA+TGG + Chr1:18285708-18285727 MsG0180001248.01.T01:intron 40.0%
!! ATGAGAAGGTACCAAAGCTA+TGG - Chr1:18283092-18283111 None:intergenic 40.0%
!! CACCACCTTGAATTTTAAGG+TGG + Chr1:18286490-18286509 MsG0180001248.01.T01:intron 40.0%
!! CGTGGGAGTAACTTGTTAAA+TGG - Chr1:18286081-18286100 None:intergenic 40.0%
!! GTATCACTGATTTCCCTATC+TGG + Chr1:18288090-18288109 MsG0180001248.01.T01:intron 40.0%
!! TATTAGTGGGGTGTTGGAAT+AGG + Chr1:18288994-18289013 MsG0180001248.01.T01:intron 40.0%
!! TCAATGATGGATAGTACCTC+TGG - Chr1:18283496-18283515 None:intergenic 40.0%
!! TGCTGCTTTAAGTGCAAAAC+TGG + Chr1:18285704-18285723 MsG0180001248.01.T01:intron 40.0%
!!! GAAATTGGTGTTTTGGCCTT+TGG + Chr1:18292876-18292895 MsG0180001248.01.T02:CDS 40.0%
!!! GCTAGCTTTTGAGATTGAGT+TGG + Chr1:18289130-18289149 MsG0180001248.01.T01:intron 40.0%
!!! GTACTTTGGTTTTGAACTCC+GGG + Chr1:18283558-18283577 MsG0180001248.01.T01:intron 40.0%
!!! TACTTTGGTTTTGAACTCCG+GGG + Chr1:18283559-18283578 MsG0180001248.01.T01:intron 40.0%
AACAGCGTTTATTTGGCGAC+TGG + Chr1:18285062-18285081 MsG0180001248.01.T01:intron 45.0%
AAGAGAGGGAGTAGGATATG+TGG + Chr1:18286664-18286683 MsG0180001248.01.T01:intron 45.0%
AAGAGCTATTAGTGGGGTGT+TGG + Chr1:18288988-18289007 MsG0180001248.01.T01:intron 45.0%
AATCGTGCGATTCTGTGAAC+AGG - Chr1:18286952-18286971 None:intergenic 45.0%
ACCAAACTGCAAGATACAGC+TGG - Chr1:18286172-18286191 None:intergenic 45.0%
ACCGTAGAGAAGAAAGCCAA+GGG - Chr1:18287592-18287611 None:intergenic 45.0%
ACTGAATTGTGGGGGACATT+TGG + Chr1:18285185-18285204 MsG0180001248.01.T01:intron 45.0%
AGAATGACTAGTACGCTGAC+TGG - Chr1:18287434-18287453 None:intergenic 45.0%
AGAATGTTGCGTTGGATGTG+TGG + Chr1:18283745-18283764 MsG0180001248.01.T01:intron 45.0%
AGGCGCTTAATGATGAGCAA+AGG - Chr1:18285997-18286016 None:intergenic 45.0%
AGTGACAACATACAGGACAC+AGG - Chr1:18286017-18286036 None:intergenic 45.0%
ATAAAGGAGGAGAGAGAGAG+TGG + Chr1:18289437-18289456 MsG0180001248.01.T01:intron 45.0%
ATACAGCATCGCCCATCTTA+AGG - Chr1:18283665-18283684 None:intergenic 45.0%
ATATGGTTGGACTACCCAGA+AGG + Chr1:18283270-18283289 MsG0180001248.01.T01:CDS 45.0%
ATCAAGCTAGAACCACTGGA+TGG - Chr1:18290747-18290766 None:intergenic 45.0%
ATCTCAAAAGCTAGCTCAGG+GGG - Chr1:18289125-18289144 None:intergenic 45.0%
ATCTCAGTTGGTTACCAAGG+GGG - Chr1:18289936-18289955 None:intergenic 45.0%
ATGGCTACTACAGAGTAACG+TGG + Chr1:18292106-18292125 MsG0180001248.01.T02:intron 45.0%
ATGTTGTCAACCACGGATCA+CGG - Chr1:18283929-18283948 None:intergenic 45.0%
CATATCCTACTCCCTCTCTT+AGG - Chr1:18286664-18286683 None:intergenic 45.0%
CATCTCAGTTGGTTACCAAG+GGG - Chr1:18289937-18289956 None:intergenic 45.0%
CCGAGATTAGAATGTTGCGT+TGG + Chr1:18283737-18283756 MsG0180001248.01.T01:intron 45.0%
CGCTTTCCTGTTGAATCCAA+AGG + Chr1:18288142-18288161 MsG0180001248.01.T01:three_prime_UTR 45.0%
CTAACAGAAATGTGCCCCTA+AGG - Chr1:18287761-18287780 None:intergenic 45.0%
CTGTGTGTGACCACTTTCTA+AGG + Chr1:18286464-18286483 MsG0180001248.01.T01:intron 45.0%
GATCCGTGGTTGACAACATT+GGG + Chr1:18283930-18283949 MsG0180001248.01.T01:CDS 45.0%
GCATCTCAGTTGGTTACCAA+GGG - Chr1:18289938-18289957 None:intergenic 45.0%
GCTGTAGCACTGTTACATAG+CGG + Chr1:18283881-18283900 MsG0180001248.01.T01:intron 45.0%
GGACATTAGAGGGAAAGTTG+GGG + Chr1:18283983-18284002 MsG0180001248.01.T01:CDS 45.0%
GGGACATTAGAGGGAAAGTT+GGG + Chr1:18283982-18284001 MsG0180001248.01.T01:CDS 45.0%
GGTGAAATCACACATCCACT+AGG + Chr1:18289058-18289077 MsG0180001248.01.T01:intron 45.0%
GTAATAACTGCCACCATAGC+AGG + Chr1:18288752-18288771 MsG0180001248.01.T01:intron 45.0%
TAACCAACTGAGATGCCACT+CGG + Chr1:18289942-18289961 MsG0180001248.01.T01:intron 45.0%
TACGTACAAGTTGTGTGGCA+AGG - Chr1:18286294-18286313 None:intergenic 45.0%
TAGAAGAGTGACATGTGGCA+TGG - Chr1:18292175-18292194 None:intergenic 45.0%
TAGCCGCTATTTGACAACAC+TGG - Chr1:18283776-18283795 None:intergenic 45.0%
TCCAGCTGTATCTTGCAGTT+TGG + Chr1:18286168-18286187 MsG0180001248.01.T01:intron 45.0%
TCTGGGCTGAGATTATTACC+AGG + Chr1:18284586-18284605 MsG0180001248.01.T01:CDS 45.0%
TGACTTATTGGCCGAATGGA+AGG + Chr1:18290864-18290883 MsG0180001248.01.T02:intron 45.0%
TGATCCGTGGTTGACAACAT+TGG + Chr1:18283929-18283948 MsG0180001248.01.T01:CDS 45.0%
TGGGTAGTCCAACCATATTC+TGG - Chr1:18283268-18283287 None:intergenic 45.0%
TGGTCACACACAGTGTCTAT+AGG - Chr1:18286457-18286476 None:intergenic 45.0%
TGGTCACTGTTGTCAAGTAG+AGG + Chr1:18285433-18285452 MsG0180001248.01.T01:intron 45.0%
! ATCGTAATTTGGTGGGAAGC+TGG - Chr1:18286904-18286923 None:intergenic 45.0%
! CAAGAGGTATGCAATCTGAC+AGG + Chr1:18288181-18288200 MsG0180001248.01.T01:intron 45.0%
! CACACTTTTGTTGCAGTTGG+TGG + Chr1:18290047-18290066 MsG0180001248.01.T01:intron 45.0%
! CTGTCTAAGGTGTTCTTTGC+AGG + Chr1:18287452-18287471 MsG0180001248.01.T01:three_prime_UTR 45.0%
! GACCCCTTTTGGATCTAGTT+AGG + Chr1:18289865-18289884 MsG0180001248.01.T01:intron 45.0%
! GATGGCACAACCAAGTTGAA+GGG - Chr1:18290729-18290748 None:intergenic 45.0%
! GGCTGATTCTCATAGTCCAA+GGG + Chr1:18290205-18290224 MsG0180001248.01.T01:three_prime_UTR 45.0%
! GGTTTGACTTATTGGCCGAA+TGG + Chr1:18290860-18290879 MsG0180001248.01.T02:intron 45.0%
! GTTTCTTTGTTTGCTGCCCT+TGG + Chr1:18287573-18287592 MsG0180001248.01.T01:three_prime_UTR 45.0%
! TCGTAATTTGGTGGGAAGCT+GGG - Chr1:18286903-18286922 None:intergenic 45.0%
! TGGCTGATTCTCATAGTCCA+AGG + Chr1:18290204-18290223 MsG0180001248.01.T01:three_prime_UTR 45.0%
! TTAATGGACGCCCTTCAACT+TGG + Chr1:18290716-18290735 MsG0180001248.01.T02:intron 45.0%
!! ACACAGTTCTCCTGGTTCTA+CGG + Chr1:18286865-18286884 MsG0180001248.01.T01:intron 45.0%
!! AGAAGGTACCAAAGCTATGG+CGG - Chr1:18283089-18283108 None:intergenic 45.0%
!! ATGCACTTCTGGTCTTGTTC+TGG + Chr1:18284568-18284587 MsG0180001248.01.T01:CDS 45.0%
!! CCACTGATTGCTCCTTTTCT+CGG - Chr1:18290172-18290191 None:intergenic 45.0%
!! GTAAGATTGGTGACCCCTTT+TGG + Chr1:18289854-18289873 MsG0180001248.01.T01:intron 45.0%
!! TGCACTTCTGGTCTTGTTCT+GGG + Chr1:18284569-18284588 MsG0180001248.01.T01:CDS 45.0%
!!! TTGGCCTTTGGTTCTGCTTT+TGG + Chr1:18292888-18292907 MsG0180001248.01.T02:CDS 45.0%
!! TTGAAATAAAAAATAATAAA+AGG - Chr1:18285650-18285669 None:intergenic 5.0%
!!! TTTTAAAAATTTGAAAAATA+TGG + Chr1:18285323-18285342 MsG0180001248.01.T01:intron 5.0%
AAAATCCACCGCAGTGCACA+TGG - Chr1:18285459-18285478 None:intergenic 50.0%
AACTTGGTTGTGCCATCCAG+TGG + Chr1:18290732-18290751 MsG0180001248.01.T02:intron 50.0%
AAGATGCGGTCTTGCCAAAC+CGG - Chr1:18283034-18283053 None:intergenic 50.0%
ACATCGACGATTCTCCGGTT+TGG + Chr1:18283017-18283036 MsG0180001248.01.T01:intron 50.0%
ACCATAGCAGGGTCTAGAGA+AGG + Chr1:18288764-18288783 MsG0180001248.01.T01:intron 50.0%
ACTAAGTGGAGCTGGCTACA+TGG - Chr1:18284231-18284250 None:intergenic 50.0%
ACTTGGCTTCAGTCCATCAG+TGG - Chr1:18284740-18284759 None:intergenic 50.0%
AGATCACGGCTGCTTAGAAG+CGG - Chr1:18289316-18289335 None:intergenic 50.0%
CAACAACCTCACCCCCTATA+AGG + Chr1:18289030-18289049 MsG0180001248.01.T01:intron 50.0%
CACACAGAAACCGTAGAACC+AGG - Chr1:18286878-18286897 None:intergenic 50.0%
CACCGTAGAGAAGAAAGCCA+AGG - Chr1:18287593-18287612 None:intergenic 50.0%
CAGACGCAAACAGAATCGGA+CGG + Chr1:18286839-18286858 MsG0180001248.01.T01:intron 50.0%
CAGTTTCCTTATAGGGGGTG+AGG - Chr1:18289039-18289058 None:intergenic 50.0%
CCACGGATCACGGAAAATAG+CGG - Chr1:18283919-18283938 None:intergenic 50.0%
CCATAGCAGGGTCTAGAGAA+GGG + Chr1:18288765-18288784 MsG0180001248.01.T01:intron 50.0%
CCGAGAAAAGGAGCAATCAG+TGG + Chr1:18290169-18290188 MsG0180001248.01.T01:three_prime_UTR 50.0%
CTATGGTACTGTCTACAGGC+AGG + Chr1:18286422-18286441 MsG0180001248.01.T01:intron 50.0%
CTCACCCCCTATAAGGAAAC+TGG + Chr1:18289037-18289056 MsG0180001248.01.T01:intron 50.0%
CTGCTATGGCCTGTGTATGA+AGG + Chr1:18285488-18285507 MsG0180001248.01.T01:intron 50.0%
CTTCTAAGCAGCCGTGATCT+AGG + Chr1:18289316-18289335 MsG0180001248.01.T01:intron 50.0%
GAACGACATCGACGATTCTC+CGG + Chr1:18283012-18283031 MsG0180001248.01.T01:CDS 50.0%
GAATACAACCGTACCACAGG+AGG - Chr1:18288796-18288815 None:intergenic 50.0%
GAGAAGGGTTAAACCTCCTG+TGG + Chr1:18288780-18288799 MsG0180001248.01.T01:intron 50.0%
GAGGGAGTAGGATATGTGGA+CGG + Chr1:18286668-18286687 MsG0180001248.01.T01:intron 50.0%
GCCACATGTCACTCTTCTAG+TGG + Chr1:18292176-18292195 MsG0180001248.01.T02:intron 50.0%
GCCACTAGAAGAGTGACATG+TGG - Chr1:18292180-18292199 None:intergenic 50.0%
GCTGAATACAACCGTACCAC+AGG - Chr1:18288799-18288818 None:intergenic 50.0%
GCTTTCTTCTCTACGGTGGA+AGG + Chr1:18287595-18287614 MsG0180001248.01.T01:three_prime_UTR 50.0%
GGATATTGGGTGTGGGTTCA+TGG + Chr1:18289886-18289905 MsG0180001248.01.T01:intron 50.0%
GGCATCTCAGTTGGTTACCA+AGG - Chr1:18289939-18289958 None:intergenic 50.0%
GGGCAGAAATTCTCAACCCT+TGG - Chr1:18289105-18289124 None:intergenic 50.0%
GGGGACATTAGAGGGAAAGT+TGG + Chr1:18283981-18284000 MsG0180001248.01.T01:CDS 50.0%
GGGTTAAACCTCCTGTGGTA+CGG + Chr1:18288785-18288804 MsG0180001248.01.T01:intron 50.0%
TATGAAGGCTGGTGGCACAA+TGG + Chr1:18285503-18285522 MsG0180001248.01.T01:intron 50.0%
TATGGCCTGTGTATGAAGGC+TGG + Chr1:18285492-18285511 MsG0180001248.01.T01:intron 50.0%
TGAGATGCCACTCGGCTAAA+AGG + Chr1:18289950-18289969 MsG0180001248.01.T01:intron 50.0%
TGCGATTCTGTGAACAGGCT+AGG - Chr1:18286947-18286966 None:intergenic 50.0%
TGCGCAGACGCAAACAGAAT+CGG + Chr1:18286835-18286854 MsG0180001248.01.T01:intron 50.0%
TGTACAGAGGTTACAGCCAG+AGG + Chr1:18283477-18283496 MsG0180001248.01.T01:intron 50.0%
TGTGTGATACCACGCTTTGG+TGG - Chr1:18290116-18290135 None:intergenic 50.0%
TTCTCTAGACCCTGCTATGG+TGG - Chr1:18288765-18288784 None:intergenic 50.0%
TTGAAATGGAGGGGGCCTAT+GGG + Chr1:18283585-18283604 MsG0180001248.01.T01:intron 50.0%
! CATGGTGGAAGGCCAAAAAC+AGG - Chr1:18285538-18285557 None:intergenic 50.0%
! CGTAATTTGGTGGGAAGCTG+GGG - Chr1:18286902-18286921 None:intergenic 50.0%
! CTTGGCTTTCTTCTCTACGG+TGG + Chr1:18287591-18287610 MsG0180001248.01.T01:three_prime_UTR 50.0%
! GCCCTTGGCTTTCTTCTCTA+CGG + Chr1:18287588-18287607 MsG0180001248.01.T01:three_prime_UTR 50.0%
! GGATGGCACAACCAAGTTGA+AGG - Chr1:18290730-18290749 None:intergenic 50.0%
! GTTCCACCAGGTTGAGGAAT+CGG - Chr1:18282996-18283015 None:intergenic 50.0%
! TAAACGGCCTTTTAGCCGAG+TGG - Chr1:18289960-18289979 None:intergenic 50.0%
! TGGCGGAAATGGCCTGTTTT+TGG + Chr1:18285523-18285542 MsG0180001248.01.T01:intron 50.0%
!! AACTCACCGATTCCTCAACC+TGG + Chr1:18282987-18283006 MsG0180001248.01.T01:CDS 50.0%
!! CTGGTTCTACGGTTTCTGTG+TGG + Chr1:18286876-18286895 MsG0180001248.01.T01:intron 50.0%
!!! CTGTTTTTGGCCTTCCACCA+TGG + Chr1:18285536-18285555 MsG0180001248.01.T01:intron 50.0%
!!! TTTGGTTTTGAACTCCGGGG+TGG + Chr1:18283562-18283581 MsG0180001248.01.T01:intron 50.0%
AGGAAGCTTCCACCAAAGCG+TGG + Chr1:18290104-18290123 MsG0180001248.01.T01:three_prime_UTR 55.0%
AGTAGAGGCCATGTGCACTG+CGG + Chr1:18285448-18285467 MsG0180001248.01.T01:intron 55.0%
ATCGTCGATGTCGTTCCACC+AGG - Chr1:18283008-18283027 None:intergenic 55.0%
CAAGGGGGATGTGGTGTTCA+AGG - Chr1:18289921-18289940 None:intergenic 55.0%
CAGCTTCTTACGACGCCCTT+TGG - Chr1:18288161-18288180 None:intergenic 55.0%
CCCTTCTCTAGACCCTGCTA+TGG - Chr1:18288768-18288787 None:intergenic 55.0%
CGACGCCCTTTGGATTCAAC+AGG - Chr1:18288151-18288170 None:intergenic 55.0%
CGTCGTTTCCGCCATAGCTT+TGG + Chr1:18283078-18283097 MsG0180001248.01.T01:intron 55.0%
CTTGAACACCACATCCCCCT+TGG + Chr1:18289919-18289938 MsG0180001248.01.T01:intron 55.0%
GAACTCCGGGGTGGTTGAAA+TGG + Chr1:18283571-18283590 MsG0180001248.01.T01:intron 55.0%
GAGCTGGAATGCGAGTCACT+TGG - Chr1:18286379-18286398 None:intergenic 55.0%
GATGTCGTTCCACCAGGTTG+AGG - Chr1:18283002-18283021 None:intergenic 55.0%
GCACGTGCTGTATCCACTGA+TGG + Chr1:18284724-18284743 MsG0180001248.01.T01:intron 55.0%
GCAGTGCATAGCAGCAGTGA+CGG + Chr1:18286602-18286621 MsG0180001248.01.T01:intron 55.0%
GCGTCGTAAGAAGCTGCAAG+AGG + Chr1:18288165-18288184 MsG0180001248.01.T01:three_prime_UTR 55.0%
GGAGGAGAGAGAGAGTGGAA+AGG + Chr1:18289442-18289461 MsG0180001248.01.T01:intron 55.0%
GGCACTAGGCTCGAAAGTCA+AGG + Chr1:18285103-18285122 MsG0180001248.01.T01:intron 55.0%
GTTGAAATGGAGGGGGCCTA+TGG + Chr1:18283584-18283603 MsG0180001248.01.T01:intron 55.0%
GTTGGTTACCAAGGGGGATG+TGG - Chr1:18289930-18289949 None:intergenic 55.0%
TAGCCGAGTGGCATCTCAGT+TGG - Chr1:18289948-18289967 None:intergenic 55.0%
TCACAGATCAGTCTGCGACC+TGG - Chr1:18286805-18286824 None:intergenic 55.0%
TCCGGGGTGGTTGAAATGGA+GGG + Chr1:18283575-18283594 MsG0180001248.01.T01:intron 55.0%
TGAAATGGAGGGGGCCTATG+GGG + Chr1:18283586-18283605 MsG0180001248.01.T01:intron 55.0%
TGAGTTCAATGCTGCCACCG+CGG - Chr1:18282973-18282992 None:intergenic 55.0%
TGCCACCAGCCTTCATACAC+AGG - Chr1:18285500-18285519 None:intergenic 55.0%
TGGTTGTGGATGGCTGACCA+TGG - Chr1:18285556-18285575 None:intergenic 55.0%
TTGTGGATGGCTGACCATGG+TGG - Chr1:18285553-18285572 None:intergenic 55.0%
! TGGTGGCACAATGGCGGAAA+TGG + Chr1:18285512-18285531 MsG0180001248.01.T01:intron 55.0%
!! CCGCTATTTTCCGTGATCCG+TGG + Chr1:18283916-18283935 MsG0180001248.01.T01:CDS 55.0%
!! GGTGGTGGAGCCTTAGAAAG+TGG - Chr1:18286477-18286496 None:intergenic 55.0%
!! TCACCGATTCCTCAACCTGG+TGG + Chr1:18282990-18283009 MsG0180001248.01.T01:CDS 55.0%
AAGCACGTGAAAGGGGGCGA+CGG - Chr1:18286732-18286751 None:intergenic 60.0%
CAACAACACCTCGCCGTCGT+CGG + Chr1:18282926-18282945 MsG0180001248.01.T01:CDS 60.0%
CCCCTCCATTTCAACCACCC+CGG - Chr1:18283579-18283598 None:intergenic 60.0%
CCGGGGTGGTTGAAATGGAG+GGG + Chr1:18283576-18283595 MsG0180001248.01.T01:intron 60.0%
CGCATCTTCTACACCCTCGC+CGG + Chr1:18283046-18283065 MsG0180001248.01.T01:intron 60.0%
CGGGGTGGTTGAAATGGAGG+GGG + Chr1:18283577-18283596 MsG0180001248.01.T01:intron 60.0%
CTCCGGGGTGGTTGAAATGG+AGG + Chr1:18283574-18283593 MsG0180001248.01.T01:intron 60.0%
GAAGGCTGGTGGCACAATGG+CGG + Chr1:18285506-18285525 MsG0180001248.01.T01:intron 60.0%
GACGGTGCACACAGTTCTCC+TGG + Chr1:18286857-18286876 MsG0180001248.01.T01:intron 60.0%
GGAAACGACGCCGTAAAGGC+CGG - Chr1:18283068-18283087 None:intergenic 60.0%
GGCCTGTGTATGAAGGCTGG+TGG + Chr1:18285495-18285514 MsG0180001248.01.T01:intron 60.0%
GGGGGATGTGGTGTTCAAGG+TGG - Chr1:18289918-18289937 None:intergenic 60.0%
TACACCCTCGCCGGCCTTTA+CGG + Chr1:18283055-18283074 MsG0180001248.01.T01:intron 60.0%
TGGCGGAAACGACGCCGTAA+AGG - Chr1:18283072-18283091 None:intergenic 60.0%
! CGGCGAGGGTGTAGAAGATG+CGG - Chr1:18283048-18283067 None:intergenic 60.0%
! GGATGGCTGACCATGGTGGA+AGG - Chr1:18285549-18285568 None:intergenic 60.0%
AGAGGCCATGTGCACTGCGG+TGG + Chr1:18285451-18285470 MsG0180001248.01.T01:intron 65.0%
!! CGACGACGGCGAGGTGTTGT+TGG - Chr1:18282928-18282947 None:intergenic 65.0%
ACCGCGCCTGTCACCGACGA+CGG - Chr1:18282942-18282961 None:intergenic 70.0%
ACCTCGCCGTCGTCGGTGAC+AGG + Chr1:18282933-18282952 MsG0180001248.01.T01:CDS 70.0%
GACGCCGTAAAGGCCGGCGA+GGG - Chr1:18283062-18283081 None:intergenic 70.0%
AGGCGCGGTGGTGAACGCCG+CGG + Chr1:18282953-18282972 MsG0180001248.01.T01:CDS 75.0%
CGACGCCGTAAAGGCCGGCG+AGG - Chr1:18283063-18283082 None:intergenic 75.0%
GCCGTCGTCGGTGACAGGCG+CGG + Chr1:18282938-18282957 MsG0180001248.01.T01:CDS 75.0%
GCCTGTCACCGACGACGGCG+AGG - Chr1:18282937-18282956 None:intergenic 75.0%
GTCGTCGGTGACAGGCGCGG+TGG + Chr1:18282941-18282960 MsG0180001248.01.T01:CDS 75.0%
! CGCGGTGGTGAACGCCGCGG+TGG + Chr1:18282956-18282975 MsG0180001248.01.T01:CDS 80.0%
Chromosome Type Strat End Strand Name
Chr1 gene 18282921 18293031 18282921 ID=MsG0180001248.01;Name=MsG0180001248.01
Chr1 mRNA 18282921 18290509 18282921 ID=MsG0180001248.01.T01;Parent=MsG0180001248.01;Name=MsG0180001248.01.T01;_AED=0.44;_eAED=0.55;_QI=0|0.66|0.7|1|0.22|0.4|10|832|137
Chr1 exon 18282921 18283033 18282921 ID=MsG0180001248.01.T01:exon:6193;Parent=MsG0180001248.01.T01
Chr1 exon 18283249 18283325 18283249 ID=MsG0180001248.01.T01:exon:6194;Parent=MsG0180001248.01.T01
Chr1 exon 18283901 18284028 18283901 ID=MsG0180001248.01.T01:exon:6195;Parent=MsG0180001248.01.T01
Chr1 exon 18284516 18284670 18284516 ID=MsG0180001248.01.T01:exon:6196;Parent=MsG0180001248.01.T01
Chr1 exon 18287390 18287473 18287390 ID=MsG0180001248.01.T01:exon:6197;Parent=MsG0180001248.01.T01
Chr1 exon 18289570 18289623 18289570 ID=MsG0180001248.01.T01:exon:6200;Parent=MsG0180001248.01.T01
Chr1 exon 18289706 18289783 18289706 ID=MsG0180001248.01.T01:exon:6201;Parent=MsG0180001248.01.T01
Chr1 exon 18290063 18290509 18290063 ID=MsG0180001248.01.T01:exon:6202;Parent=MsG0180001248.01.T01
Chr1 CDS 18282921 18283033 18282921 ID=MsG0180001248.01.T01:cds;Parent=MsG0180001248.01.T01
Chr1 CDS 18283249 18283325 18283249 ID=MsG0180001248.01.T01:cds;Parent=MsG0180001248.01.T01
Chr1 CDS 18283901 18284028 18283901 ID=MsG0180001248.01.T01:cds;Parent=MsG0180001248.01.T01
Chr1 CDS 18284516 18284611 18284516 ID=MsG0180001248.01.T01:cds;Parent=MsG0180001248.01.T01
Chr1 three_prime_UTR 18284612 18284670 18284612 ID=MsG0180001248.01.T01:three_prime_utr;Parent=MsG0180001248.01.T01
Chr1 three_prime_UTR 18287390 18287473 18287390 ID=MsG0180001248.01.T01:three_prime_utr;Parent=MsG0180001248.01.T01
Chr1 three_prime_UTR 18287571 18287616 18287571 ID=MsG0180001248.01.T01:three_prime_utr;Parent=MsG0180001248.01.T01
Chr1 three_prime_UTR 18288123 18288186 18288123 ID=MsG0180001248.01.T01:three_prime_utr;Parent=MsG0180001248.01.T01
Chr1 three_prime_UTR 18289570 18289623 18289570 ID=MsG0180001248.01.T01:three_prime_utr;Parent=MsG0180001248.01.T01
Chr1 three_prime_UTR 18289706 18289783 18289706 ID=MsG0180001248.01.T01:three_prime_utr;Parent=MsG0180001248.01.T01
Chr1 three_prime_UTR 18290063 18290509 18290063 ID=MsG0180001248.01.T01:three_prime_utr;Parent=MsG0180001248.01.T01
Chr1 mRNA 18284712 18293031 18284712 ID=MsG0180001248.01.T02;Parent=MsG0180001248.01;Name=MsG0180001248.01.T02;_AED=0.44;_eAED=0.58;_QI=0|0.2|0.33|1|0.2|0.33|6|0|441
Chr1 exon 18284712 18284874 18284712 ID=MsG0180001248.01.T02:exon:6203;Parent=MsG0180001248.01.T02
Chr1 exon 18289706 18289853 18289706 ID=MsG0180001248.01.T02:exon:6204;Parent=MsG0180001248.01.T02
Chr1 exon 18289972 18290190 18289972 ID=MsG0180001248.01.T02:exon:6205;Parent=MsG0180001248.01.T02
Chr1 exon 18292346 18293031 18292346 ID=MsG0180001248.01.T02:exon:6206;Parent=MsG0180001248.01.T02
Chr1 CDS 18284712 18284874 18284712 ID=MsG0180001248.01.T02:cds;Parent=MsG0180001248.01.T02
Chr1 CDS 18287571 18287616 18287571 ID=MsG0180001248.01.T02:cds;Parent=MsG0180001248.01.T02
Chr1 CDS 18288123 18288186 18288123 ID=MsG0180001248.01.T02:cds;Parent=MsG0180001248.01.T02
Chr1 CDS 18289706 18289853 18289706 ID=MsG0180001248.01.T02:cds;Parent=MsG0180001248.01.T02
Chr1 CDS 18289972 18290190 18289972 ID=MsG0180001248.01.T02:cds;Parent=MsG0180001248.01.T02
Chr1 CDS 18292346 18293031 18292346 ID=MsG0180001248.01.T02:cds;Parent=MsG0180001248.01.T02
Gene Sequence

>MsG0180001248.01.T02

ATGTTTTTGCAGGCACGTGCTGTATCCACTGATGGACTGAAGCCAAGTTTCTATACAATTAATGTTGTGGTTTATGCTGTTCAGGTGAAAATTCTTGTCTATGTTTTGTTGTGTTTTACCTTTTTAAGATCATGGATGTTGCACACAGCTCGATTCATTTTTGCGGTTTCTTTGTTTGCTGCCCTTGGCTTTCTTCTCTACGGTGGAAGACTATTCTTGATGCTGCAACGCTTTCCTGTTGAATCCAAAGGGCGTCGTAAGAAGCTGCAAGAGATGTGCTTTAATGCATTTGATAAAAACGCGAACCTTAATGTGATGGACCATCCTATTCTAAACTTCATATATTACCTGGTAAGGTTTTTTTGTGTTCTCAATTGTGGTTCTTTTACTGCCAATACTCTTACTGTTTATTTATTTTTTGGCCGTTTAATCCATAAATCTGTGTTTGTGTGGCTTCGACTTTGTCGCTCTCTCCCACTATTCCTCTTACCCTTTTCACACTTTTGTTGCAGTTGGTGGAAATATTACCTTCTCTTTGGTCTTATTCATTTTGAGGAAGCTTCCACCAAAGCGTGGTATCACACAATATCACCCGATTCGCTGAAAAGATTGAAAATACCGAGAAAAGGAGCAATCAGTGATTGGTCTCTAGCTTATACAAAATGTTACACAACAAGAACATTAAACTTGCATGCATTCATCATTCCCACGTGTCATTTCCCTTCTAATCCAAAGTTTTTCCATGCAAACTTCTCAGCTTCTTCTCACACCCCCATTTTAGAAGAAACTTCTTCTAACACCCCCTTGATCAATTTAGATGTTAACTTTTCTGACACTACAAAATATTCCAAGCCAGAAATTGATCAGAATTTGAATGGTTTTCTATGTGGGTTGTTTGAGGATCCAAAGAAGCATGAACTAGCTTTTGATTATTATCAAAGACTCAAAGATAGACCAGAGTTTAGACCAATGAAATCAACGTTAAACCATGTCATAAGGTATTTGTTAAGATTCAAGAAATGGGAATTTTTTATATCAGTTTGTGAAGATTTTAAGGTTTATCATGTTTTACCTGATACTGCTACTTGTTCTAAGTTGATTAGTTTTTGCATTAAGAATAGAAAATTCAAGATTGCTGAGACATTTCTTGATGCATTTAGTTCTGATAGTGAAATTGGTGTTTTGGCCTTTGGTTCTGCTTTTGGAAGTTACAATAAGCTTCATATGTTTAGGAAAACTGTTTTGGTTTTTGAGAAAATGAAATCAAGCAGTGTTGCTATGGATTCAAGATGCTATTTGCATGTTATGGACTTATTTGAGACTTGA

>MsG0180001248.01.T01

ATGACCAACAACACCTCGCCGTCGTCGGTGACAGGCGCGGTGGTGAACGCCGCGGTGGCAGCATTGAACTCACCGATTCCTCAACCTGGTGGAACGACATCGACGATTCTCCGAATACAATTGAGAGTTCCAGAATATGGTTGGACTACCCAGAAGGTGTTTCATTTTCTCAATTTTGTGGTGAATGCAGCGGAATTTGAACAAACCGCTATTTTCCGTGATCCGTGGTTGACAACATTGGGTAAGACTAGACATGATATAATTAGACATGGGGACATTAGAGGGAAAGTTGGGGTACCACCTTTTGTAGAAAATATGATTGTCCAACATATCTTACTTGATGTGCCAAGTCTTGCTTTCTTTACAACATATGCACTTCTGGTCTTGTTCTGGGCTGAGATTATTACCAGGTAA

Protein sequence

>MsG0180001248.01.T02

MFLQARAVSTDGLKPSFYTINVVVYAVQVKILVYVLLCFTFLRSWMLHTARFIFAVSLFAALGFLLYGGRLFLMLQRFPVESKGRRKKLQEMCFNAFDKNANLNVMDHPILNFIYYLVRFFCVLNCGSFTANTLTVYLFFGRLIHKSVFVWLRLCRSLPLFLLPFSHFCCSWWKYYLLFGLIHFEEASTKAWYHTISPDSLKRLKIPRKGAISDWSLAYTKCYTTRTLNLHAFIIPTCHFPSNPKFFHANFSASSHTPILEETSSNTPLINLDVNFSDTTKYSKPEIDQNLNGFLCGLFEDPKKHELAFDYYQRLKDRPEFRPMKSTLNHVIRYLLRFKKWEFFISVCEDFKVYHVLPDTATCSKLISFCIKNRKFKIAETFLDAFSSDSEIGVLAFGSAFGSYNKLHMFRKTVLVFEKMKSSSVAMDSRCYLHVMDLFET*

>MsG0180001248.01.T01

MTNNTSPSSVTGAVVNAAVAALNSPIPQPGGTTSTILRIQLRVPEYGWTTQKVFHFLNFVVNAAEFEQTAIFRDPWLTTLGKTRHDIIRHGDIRGKVGVPPFVENMIVQHILLDVPSLAFFTTYALLVLFWAEIITR*