AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480024025.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480024025.01.T01 MTR_3g437840 86.131 137 19 0 40 176 12 148 5.20e-82 243
MsG0480024025.01.T01 MTR_2g014470 60.000 135 52 1 42 176 193 325 7.14e-51 170
MsG0480024025.01.T01 MTR_2g090705 60.317 126 50 0 51 176 196 321 8.22e-48 162
MsG0480024025.01.T01 MTR_4g015840 54.762 126 57 0 51 176 123 248 2.26e-47 159
MsG0480024025.01.T01 MTR_4g078850 57.143 126 54 0 51 176 205 330 4.92e-47 160
MsG0480024025.01.T01 MTR_4g015840 54.762 126 57 0 51 176 200 325 2.72e-46 158
MsG0480024025.01.T01 MTR_3g437360 62.400 125 44 2 52 173 214 338 9.40e-43 149
MsG0480024025.01.T01 MTR_2g014480 53.906 128 56 2 51 175 204 331 1.13e-41 146
MsG0480024025.01.T01 MTR_5g037880 51.220 123 60 0 52 174 137 259 5.02e-40 140
MsG0480024025.01.T01 MTR_3g108020 50.806 124 61 0 53 176 189 312 4.25e-39 139
MsG0480024025.01.T01 MTR_2g006890 44.361 133 73 1 44 175 229 361 2.06e-30 117
MsG0480024025.01.T01 MTR_5g085220 63.043 92 19 3 191 267 69 160 1.33e-27 105
MsG0480024025.01.T01 MTR_4g471610 65.882 85 15 2 191 261 69 153 9.91e-27 102
MsG0480024025.01.T01 MTR_3g078440 65.882 85 15 2 191 261 69 153 9.91e-27 102
MsG0480024025.01.T01 MTR_8g036090 65.882 85 15 2 191 261 69 153 9.91e-27 102
MsG0480024025.01.T01 MTR_1g036740 65.882 85 15 2 191 261 69 153 1.40e-26 102
MsG0480024025.01.T01 MTR_8g096680 65.882 85 15 2 191 261 69 153 1.40e-26 102
MsG0480024025.01.T01 MTR_3g088140 39.200 125 75 1 52 175 215 339 1.40e-26 106
MsG0480024025.01.T01 MTR_3g116750 63.043 92 19 3 191 267 69 160 2.54e-26 101
MsG0480024025.01.T01 MTR_3g095950 63.043 92 19 3 191 267 69 160 3.07e-26 101
MsG0480024025.01.T01 MTR_4g016120 63.043 92 19 3 191 267 60 151 3.51e-26 100
MsG0480024025.01.T01 MTR_3g084550 64.706 85 16 2 191 261 28 112 1.02e-25 99.0
MsG0480024025.01.T01 MTR_4g028320 64.706 85 16 2 191 261 50 134 1.16e-25 99.4
MsG0480024025.01.T01 MTR_4g022520 64.368 87 17 2 191 263 29 115 1.23e-25 100
MsG0480024025.01.T01 MTR_8g463820 65.882 85 15 2 191 261 69 153 1.82e-25 102
MsG0480024025.01.T01 MTR_6g039240 65.882 85 15 2 191 261 69 153 2.49e-25 102
MsG0480024025.01.T01 MTR_7g089660 64.706 85 16 2 191 261 69 153 2.64e-25 100
MsG0480024025.01.T01 MTR_1g094230 65.882 85 15 2 191 261 69 153 2.87e-25 102
MsG0480024025.01.T01 MTR_7g093810 61.957 92 20 3 191 267 69 160 4.72e-25 98.2
MsG0480024025.01.T01 MTR_1g072220 63.529 85 17 2 191 261 28 112 1.22e-24 95.9
MsG0480024025.01.T01 MTR_5g055160 62.353 85 18 2 191 261 69 153 2.88e-23 95.9
MsG0480024025.01.T01 MTR_1788s0010 75.806 62 14 1 191 251 69 130 3.01e-23 92.4
MsG0480024025.01.T01 MTR_3g007370 78.947 57 11 1 196 251 1 57 6.37e-23 89.4
MsG0480024025.01.T01 MTR_5g007120 62.353 85 18 2 191 261 38 122 1.41e-22 93.2
MsG0480024025.01.T01 MTR_6g013455 59.574 94 22 3 191 268 63 156 1.79e-22 94.0
MsG0480024025.01.T01 MTR_8g088810 77.419 62 13 1 191 251 69 130 1.83e-22 94.4
MsG0480024025.01.T01 MTR_2g032570 74.194 62 15 1 191 251 69 130 2.15e-22 91.3
MsG0480024025.01.T01 MTR_5g056060 62.353 85 18 2 191 261 63 147 3.79e-22 92.4
MsG0480024025.01.T01 MTR_8g078450 62.500 80 16 2 196 261 1 80 6.30e-22 89.7
MsG0480024025.01.T01 MTR_5g068430 57.778 90 24 2 191 266 62 151 1.03e-21 90.1
MsG0480024025.01.T01 MTR_2g099880 61.176 85 19 2 191 261 34 118 1.22e-21 88.2
MsG0480024025.01.T01 MTR_3g031560 75.439 57 13 1 196 251 1 57 1.42e-21 85.9
MsG0480024025.01.T01 MTR_2g091000 73.684 57 14 1 196 251 1 57 6.97e-21 84.0
MsG0480024025.01.T01 MTR_7g104000 61.446 83 18 2 191 259 63 145 1.01e-20 88.6
MsG0480024025.01.T01 MTR_3g067530 62.025 79 16 2 196 260 1 79 9.40e-20 82.8
MsG0480024025.01.T01 MTR_3g102720 70.909 55 15 1 191 244 28 82 2.95e-19 80.5
MsG0480024025.01.T01 MTR_5g054640 51.899 79 34 2 191 268 47 122 2.68e-18 79.3
MsG0480024025.01.T01 MTR_1g087080 58.462 65 26 1 191 254 29 93 2.72e-18 78.2
MsG0480024025.01.T01 MTR_2g087660 32.258 124 82 1 54 175 221 344 2.81e-18 84.0
MsG0480024025.01.T01 MTR_1g091180 65.455 55 18 1 191 244 47 101 6.71e-18 77.8
MsG0480024025.01.T01 MTR_2g015610 58.462 65 26 1 191 254 33 97 7.81e-18 77.0
MsG0480024025.01.T01 MTR_8g006430 32.558 129 85 1 48 174 217 345 2.52e-17 81.3
MsG0480024025.01.T01 MTR_4g050420 29.487 156 100 2 54 207 219 366 2.85e-17 81.3
MsG0480024025.01.T01 MTR_7g027115 48.101 79 32 2 191 268 39 109 1.02e-16 74.7
MsG0480024025.01.T01 MTR_1g073290 63.636 55 19 1 191 244 29 83 1.19e-16 73.6
MsG0480024025.01.T01 MTR_7g060710 69.231 52 15 1 191 241 40 91 2.24e-16 73.2
MsG0480024025.01.T01 MTR_1g108420 68.000 50 15 1 196 244 1 50 5.13e-16 70.9
MsG0480024025.01.T01 MTR_3g056250 66.000 50 16 1 196 244 1 50 1.09e-15 70.1
MsG0480024025.01.T01 MTR_1g100617 66.000 50 16 1 196 244 1 50 2.05e-15 69.3
MsG0480024025.01.T01 MTR_1g011440 68.000 50 15 1 196 244 1 50 3.04e-15 68.9
MsG0480024025.01.T01 MTR_8g018670 62.000 50 18 1 196 244 1 50 3.86e-14 65.9
MsG0480024025.01.T01 MTR_7g088780 60.000 50 19 1 196 244 1 50 1.36e-12 61.6
MsG0480024025.01.T01 MTR_7g109340 28.873 142 98 2 36 175 189 329 4.96e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480024025.01.T01 AT4G28480 42.995 207 83 2 5 176 70 276 1.17e-50 168
MsG0480024025.01.T01 AT4G28480 58.730 126 52 0 51 176 209 334 3.03e-49 166
MsG0480024025.01.T01 AT2G20560 57.937 126 53 0 51 176 198 323 5.44e-49 165
MsG0480024025.01.T01 AT3G47940 55.072 138 61 1 40 176 196 333 2.57e-48 164
MsG0480024025.01.T01 AT5G01390 56.349 126 55 0 51 176 137 262 2.99e-47 159
MsG0480024025.01.T01 AT5G01390 56.349 126 55 0 51 176 195 320 6.45e-47 159
MsG0480024025.01.T01 AT3G08910 56.349 126 55 0 51 176 182 307 1.64e-46 158
MsG0480024025.01.T01 AT2G20550 55.200 125 56 0 51 175 145 269 2.79e-46 156
MsG0480024025.01.T01 AT2G20550 55.200 125 56 0 51 175 145 269 2.79e-46 156
MsG0480024025.01.T01 AT1G59725 52.381 126 60 0 51 176 190 315 1.00e-42 149
MsG0480024025.01.T01 AT1G10350 50.000 134 66 1 43 176 201 333 1.66e-41 146
MsG0480024025.01.T01 AT5G25530 53.226 124 58 0 53 176 201 324 4.97e-41 144
MsG0480024025.01.T01 AT5G25530 53.226 124 58 0 53 176 209 332 5.98e-41 144
MsG0480024025.01.T01 AT1G11040 37.594 133 83 0 44 176 287 419 4.11e-28 112
MsG0480024025.01.T01 AT1G44160 39.831 118 71 0 57 174 221 338 3.43e-24 100
MsG0480024025.01.T01 AT5G01390 41.270 126 35 1 51 176 137 223 1.94e-21 90.5
MsG0480024025.01.T01 AT3G44110 33.333 123 80 1 54 174 221 343 4.25e-19 86.7
MsG0480024025.01.T01 AT5G22060 33.871 124 80 1 54 175 222 345 1.73e-18 84.7
MsG0480024025.01.T01 AT3G44110 32.407 108 71 1 54 159 221 328 2.50e-15 75.1
MsG0480024025.01.T01 AT3G62600 33.058 121 80 1 55 175 212 331 1.43e-13 70.1

Find 69 sgRNAs with CRISPR-Local

Find 313 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCCTGGTTGTTTGGTTAT+TGG 0.105856 4:+92504509 None:intergenic
CATCTGCCACAGTTATCTTT+TGG 0.254427 4:+92504645 None:intergenic
TGATAAGACAATGATTTCTT+TGG 0.279125 4:-92507126 MsG0480024025.01.T01:CDS
AGGGAAGCATACTTGGGTTT+TGG 0.287951 4:-92504337 MsG0480024025.01.T01:CDS
ACACCTGCACCTGATGTAAT+TGG 0.294616 4:-92502128 MsG0480024025.01.T01:CDS
GGTTATTGGCATCCCTTCAT+TGG 0.296706 4:+92504523 None:intergenic
TCCCTTCCTCCCTGGTTGTT+TGG 0.304363 4:+92504502 None:intergenic
CTTGTCACCCTTCTCTTTGA+AGG 0.307168 4:+92504760 None:intergenic
CGGAAAATCTATGACCAATA+TGG 0.309091 4:-92507264 None:intergenic
GTTATTGGCATCCCTTCATT+GGG 0.325745 4:+92504524 None:intergenic
AACATTGGAAATCCCTGCTT+TGG 0.339373 4:-92504609 MsG0480024025.01.T01:CDS
GGGACTTTGTGCTCATAGTC+AGG 0.400832 4:+92504545 None:intergenic
GAATACCAGGGAAGCATACT+TGG 0.402833 4:-92504344 MsG0480024025.01.T01:CDS
AAGACCCTTCTTCGCCATAT+TGG 0.419861 4:+92507250 None:intergenic
TGCTGAGGAGTTAACCTTGA+GGG 0.426712 4:+92504449 None:intergenic
TAGTCAGGTGTGACTACATT+TGG 0.447989 4:+92504560 None:intergenic
GTGTGACTACATTTGGCAAC+TGG 0.449709 4:+92504567 None:intergenic
TTTAAAGTTCCCTTCCTCCC+TGG 0.465519 4:+92504494 None:intergenic
TATGACCAATATGGCGAAGA+AGG 0.465769 4:-92507255 MsG0480024025.01.T01:CDS
CACCACACGCTCGTTATACT+AGG 0.470803 4:-92504691 MsG0480024025.01.T01:CDS
ATGTGAAGGGCTAGAATACC+AGG 0.478448 4:-92504357 MsG0480024025.01.T01:intron
AGAAGATGCCGTGGAGGGAG+CGG 0.479187 4:+92507214 None:intergenic
AAATCCCTGCTTTGGATGGA+AGG 0.492818 4:-92504601 MsG0480024025.01.T01:CDS
GAGAAGGGTGACAAGAAGCC+TGG 0.498438 4:-92504752 MsG0480024025.01.T01:CDS
TTGGAAATCCCTGCTTTGGA+TGG 0.500318 4:-92504605 MsG0480024025.01.T01:CDS
GAGCACAAAGTCCCCAATGA+AGG 0.506226 4:-92504536 MsG0480024025.01.T01:CDS
AGAATCCTTCCATCCAAAGC+AGG 0.506880 4:+92504596 None:intergenic
CGGTGGTGCCGCTCCCTCCA+CGG 0.510129 4:-92507222 MsG0480024025.01.T01:CDS
CACGCTCGTTATACTAGGAA+TGG 0.517367 4:-92504686 MsG0480024025.01.T01:CDS
ATATCAGCTGGGATGATGCC+AGG 0.518154 4:+92504734 None:intergenic
AACCAAACAACCAGGGAGGA+AGG 0.520867 4:-92504504 MsG0480024025.01.T01:CDS
AAAACCCAAGTATGCTTCCC+TGG 0.523738 4:+92504339 None:intergenic
TTGACTATTGATGTAAAAGC+TGG 0.525780 4:-92504806 MsG0480024025.01.T01:CDS
AGTTTGTATTCGCTGCGTGA+TGG 0.529525 4:+92502221 None:intergenic
GTCATGACTCCAATTACATC+AGG 0.529630 4:+92502119 None:intergenic
GCGAAGAAGGGTCTTCAATA+CGG 0.532835 4:-92507242 MsG0480024025.01.T01:CDS
GTAAACGAATACACGTTTGA+TGG 0.534434 4:+92502149 None:intergenic
GATGTAATTGGAGTCATGAC+TGG 0.535785 4:-92502116 MsG0480024025.01.T01:CDS
TGCTCTCACAAATAAAACAT+TGG 0.539708 4:-92504624 MsG0480024025.01.T01:CDS
TAAACGAATACACGTTTGAT+GGG 0.540964 4:+92502150 None:intergenic
AGGTTAAGGAGCAGCTCAAG+AGG 0.548782 4:-92502297 MsG0480024025.01.T01:intron
ACCAAACAACCAGGGAGGAA+GGG 0.555678 4:-92504503 MsG0480024025.01.T01:CDS
AAAGGTTACCTTCAAAGAGA+AGG 0.563765 4:-92504768 MsG0480024025.01.T01:CDS
AGGAGCAGCTCAAGAGGGAA+TGG 0.564622 4:-92502291 MsG0480024025.01.T01:intron
TGATAATCTGAAGATGAAGA+TGG 0.564778 4:+92507170 None:intergenic
AGCACAAAGTCCCCAATGAA+GGG 0.568803 4:-92504535 MsG0480024025.01.T01:CDS
ACGAGAAGAAGATGCCGTGG+AGG 0.577722 4:+92507208 None:intergenic
GGTTAAGGAGCAGCTCAAGA+GGG 0.577844 4:-92502296 MsG0480024025.01.T01:intron
CGAGAAGAAGATGCCGTGGA+GGG 0.584340 4:+92507209 None:intergenic
AAGGTTACCTTCAAAGAGAA+GGG 0.588105 4:-92504767 MsG0480024025.01.T01:CDS
AATACCAGGGAAGCATACTT+GGG 0.597707 4:-92504343 MsG0480024025.01.T01:CDS
ACTCCAATTACATCAGGTGC+AGG 0.598431 4:+92502125 None:intergenic
CTATTGATGTAAAAGCTGGA+TGG 0.604030 4:-92504802 MsG0480024025.01.T01:CDS
ATGACCAATATGGCGAAGAA+GGG 0.604839 4:-92507254 MsG0480024025.01.T01:CDS
TTGACATCAAGTATCCCTCA+AGG 0.608887 4:-92504463 MsG0480024025.01.T01:intron
GAATCCTTCCATCCAAAGCA+GGG 0.617620 4:+92504597 None:intergenic
ATGCCAATAACCAAACAACC+AGG 0.618075 4:-92504512 MsG0480024025.01.T01:CDS
TCATTGATGTTGCTTGACAG+TGG 0.623554 4:-92502254 MsG0480024025.01.T01:CDS
AGAACGAGAAGAAGATGCCG+TGG 0.625837 4:+92507205 None:intergenic
TTATTGGCATCCCTTCATTG+GGG 0.630031 4:+92504525 None:intergenic
AGAGCATATCAAAGAGACAG+TGG 0.636706 4:-92502081 MsG0480024025.01.T01:CDS
GCATCTTCTTCTCGTTCTCG+CGG 0.640893 4:-92507200 MsG0480024025.01.T01:CDS
ACTGTCAAGCAACATCAATG+AGG 0.677588 4:+92502256 None:intergenic
TTCCTAGTATAACGAGCGTG+TGG 0.677701 4:+92504689 None:intergenic
TGCCAATAACCAAACAACCA+GGG 0.704089 4:-92504511 MsG0480024025.01.T01:CDS
AAGAAGGGTCTTCAATACGG+TGG 0.715515 4:-92507239 MsG0480024025.01.T01:CDS
GATTATCCAAAAGATAACTG+TGG 0.729370 4:-92504651 MsG0480024025.01.T01:CDS
TGTGAAGGGCTAGAATACCA+GGG 0.742349 4:-92504356 MsG0480024025.01.T01:intron
CAATAACCAAACAACCAGGG+AGG 0.753546 4:-92504508 MsG0480024025.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATACAAATTTATGTAATT+AGG - Chr4:92502669-92502688 MsG0480024025.01.T01:intron 10.0%
!! ATAATAACAAAAATAAAGTT+AGG + Chr4:92502376-92502395 None:intergenic 10.0%
!! TAATAACAAAAATAAAGTTA+GGG + Chr4:92502375-92502394 None:intergenic 10.0%
!! TAATTACATAAATTTGTATT+TGG + Chr4:92502670-92502689 None:intergenic 10.0%
!!! ACAATTAAATTTTAATTAGT+AGG + Chr4:92506386-92506405 None:intergenic 10.0%
!!! TAAATTTTTTCAACTTTTAT+TGG - Chr4:92505268-92505287 MsG0480024025.01.T01:intron 10.0%
!! TAATTGATAGAAAATCAAAA+CGG + Chr4:92503691-92503710 None:intergenic 15.0%
!! TTAAGCTTGTATTAAAAATA+AGG + Chr4:92506017-92506036 None:intergenic 15.0%
!!! AATTTTTGTTGTAATTGATT+AGG - Chr4:92502413-92502432 MsG0480024025.01.T01:intron 15.0%
!!! ATTGAATTGTGTAAATTTTT+GGG - Chr4:92504926-92504945 MsG0480024025.01.T01:intron 15.0%
!!! ATTGTAGTAATTAGTTTTTA+AGG - Chr4:92506401-92506420 MsG0480024025.01.T01:intron 15.0%
!!! ATTTTTGTTGTAATTGATTA+GGG - Chr4:92502414-92502433 MsG0480024025.01.T01:intron 15.0%
!!! TAAAAATAAGGAGAAATTTT+TGG + Chr4:92506005-92506024 None:intergenic 15.0%
!!! TTATGAAGTTAATTTTTTGT+AGG - Chr4:92506497-92506516 MsG0480024025.01.T01:intron 15.0%
!!! TTTGATTAGTAATTTTGTTT+TGG + Chr4:92504191-92504210 None:intergenic 15.0%
!!! TTTTCTTTTGATTAAACTTA+TGG - Chr4:92505074-92505093 MsG0480024025.01.T01:intron 15.0%
!!! TTTTTTTTTTTCAATTTCTC+TGG - Chr4:92505519-92505538 MsG0480024025.01.T01:intron 15.0%
!! AAAAACTAGCTAGTAAAATT+TGG + Chr4:92505058-92505077 None:intergenic 20.0%
!! AAGACATGAATAAATCTAAT+AGG + Chr4:92505575-92505594 None:intergenic 20.0%
!! AATAATTAAAAAATGTCGCT+AGG + Chr4:92505726-92505745 None:intergenic 20.0%
!! AATCATAACATAAACCAAAA+AGG + Chr4:92502523-92502542 None:intergenic 20.0%
!! AGTCTGTTTATTTACTTATT+AGG - Chr4:92505143-92505162 MsG0480024025.01.T01:intron 20.0%
!! ATATCTGATTCTAATATGAT+AGG - Chr4:92503518-92503537 MsG0480024025.01.T01:intron 20.0%
!! ATCATAACATAAACCAAAAA+GGG + Chr4:92502522-92502541 None:intergenic 20.0%
!! ATTGAAACTACTAATTATCA+GGG - Chr4:92502548-92502567 MsG0480024025.01.T01:intron 20.0%
!! GTCTGTTTATTTACTTATTA+GGG - Chr4:92505144-92505163 MsG0480024025.01.T01:intron 20.0%
!! TATACGTTCCATTAAAAATT+TGG - Chr4:92506286-92506305 MsG0480024025.01.T01:intron 20.0%
!! TATAGAAAATAGTACCATAA+CGG + Chr4:92506622-92506641 None:intergenic 20.0%
!! TCTGTTTATTTACTTATTAG+GGG - Chr4:92505145-92505164 MsG0480024025.01.T01:intron 20.0%
!! TGTAATTATATGATATGTGT+CGG - Chr4:92503017-92503036 MsG0480024025.01.T01:intron 20.0%
!! TTAATAGATATTAACCGTTA+TGG - Chr4:92506605-92506624 MsG0480024025.01.T01:intron 20.0%
!! TTGTACATAAAATACATAGT+TGG - Chr4:92506081-92506100 MsG0480024025.01.T01:intron 20.0%
!! TTGTATTTGGATTATCAATA+TGG + Chr4:92502657-92502676 None:intergenic 20.0%
!! TTTCTATGTTACATTAAAAG+TGG - Chr4:92506148-92506167 MsG0480024025.01.T01:intron 20.0%
!!! AAAATAACTAAACTGTTTTC+AGG + Chr4:92503837-92503856 None:intergenic 20.0%
!!! AAATAACTAAACTGTTTTCA+GGG + Chr4:92503836-92503855 None:intergenic 20.0%
!!! AAGTTCATATGAATTCTTTT+TGG + Chr4:92505490-92505509 None:intergenic 20.0%
!!! ATTTTGAATATATGATGTGA+AGG - Chr4:92504956-92504975 MsG0480024025.01.T01:intron 20.0%
!!! ATTTTTTCAACTTTTATTGG+TGG - Chr4:92505271-92505290 MsG0480024025.01.T01:intron 20.0%
!!! CATTGAATTGTGTAAATTTT+TGG - Chr4:92504925-92504944 MsG0480024025.01.T01:intron 20.0%
!!! TAGTTAATTTGTCACTTTTT+TGG - Chr4:92503947-92503966 MsG0480024025.01.T01:intron 20.0%
!!! TGATTTTCTCAAATTATTAG+TGG + Chr4:92502987-92503006 None:intergenic 20.0%
!!! TGTAACTTTAATGTGTTTTT+AGG + Chr4:92505848-92505867 None:intergenic 20.0%
!!! TGTTTAATCTTTGTTATCTA+TGG - Chr4:92506969-92506988 MsG0480024025.01.T01:intron 20.0%
!!! TTGAATTGTGTAAATTTTTG+GGG - Chr4:92504927-92504946 MsG0480024025.01.T01:intron 20.0%
!!! TTTTGAATATATGATGTGAA+GGG - Chr4:92504957-92504976 MsG0480024025.01.T01:intron 20.0%
! AATCTTACTGAAAGTTTCAT+TGG - Chr4:92503742-92503761 MsG0480024025.01.T01:intron 25.0%
! ACAAATTAACTACAAACTTG+AGG + Chr4:92503939-92503958 None:intergenic 25.0%
! AGTGTTAAACATAACTACAA+TGG - Chr4:92502767-92502786 MsG0480024025.01.T01:intron 25.0%
! ATAATCTCATACAAACTGTA+TGG + Chr4:92504275-92504294 None:intergenic 25.0%
! ATCACAAAAATAATATCAGC+TGG + Chr4:92504608-92504627 None:intergenic 25.0%
! CAAATTAACTACAAACTTGA+GGG + Chr4:92503938-92503957 None:intergenic 25.0%
! CAATTTACTATACCTGAAAT+GGG + Chr4:92504490-92504509 None:intergenic 25.0%
! CCTACTATAAACAGATAAAT+CGG + Chr4:92504305-92504324 None:intergenic 25.0%
! CTAATATGATAGGATAGTAT+AGG - Chr4:92503528-92503547 MsG0480024025.01.T01:intron 25.0%
! CTCTATTGAATAGAAGAATT+TGG - Chr4:92504347-92504366 MsG0480024025.01.T01:CDS 25.0%
! GATTGAAACTACTAATTATC+AGG - Chr4:92502547-92502566 MsG0480024025.01.T01:intron 25.0%
! GTCCTACAAAATACAAAATT+CGG - Chr4:92502620-92502639 MsG0480024025.01.T01:intron 25.0%
! TAGAAAAGTAACTTTCGTAA+TGG + Chr4:92505812-92505831 None:intergenic 25.0%
! TCAATTTACTATACCTGAAA+TGG + Chr4:92504491-92504510 None:intergenic 25.0%
! TCACAAAAATAATATCAGCT+GGG + Chr4:92504607-92504626 None:intergenic 25.0%
! TCATAACATAAACCAAAAAG+GGG + Chr4:92502521-92502540 None:intergenic 25.0%
! TGATAAGACAATGATTTCTT+TGG - Chr4:92502201-92502220 MsG0480024025.01.T01:CDS 25.0%
! TGCAATACTTATATTCTAGA+TGG - Chr4:92503457-92503476 MsG0480024025.01.T01:intron 25.0%
! TTGAATAGAAGAATTTGGAA+AGG - Chr4:92504352-92504371 MsG0480024025.01.T01:CDS 25.0%
! TTTGATCAAAGATTATTTCC+AGG - Chr4:92503649-92503668 MsG0480024025.01.T01:intron 25.0%
!! AGTTCTTCTTTTCTATTATG+TGG - Chr4:92506689-92506708 MsG0480024025.01.T01:intron 25.0%
!! ATTTCAGGTATAGTAAATTG+AGG - Chr4:92504490-92504509 MsG0480024025.01.T01:CDS 25.0%
!! GAATATAAGTATTGCATATC+AGG + Chr4:92503453-92503472 None:intergenic 25.0%
!! GGACTAAACACTAAATATTT+TGG + Chr4:92502604-92502623 None:intergenic 25.0%
!! GTAACCTACCAAATTTTTAA+TGG + Chr4:92506297-92506316 None:intergenic 25.0%
!! TTCATATGAATTCTTTTTGG+TGG + Chr4:92505487-92505506 None:intergenic 25.0%
!!! AACTTATGGTTTTTGAGTTT+TGG - Chr4:92505088-92505107 MsG0480024025.01.T01:intron 25.0%
!!! ACTTTGTTTCCTATTTTTCT+AGG + Chr4:92503880-92503899 None:intergenic 25.0%
!!! CTTTTTAGTTAAGGTTTAAG+TGG - Chr4:92503786-92503805 MsG0480024025.01.T01:intron 25.0%
!!! GATTAGTAATTTTGTTTTGG+TGG + Chr4:92504188-92504207 None:intergenic 25.0%
!!! TAATTTTGTTTTGGTGGATA+TGG + Chr4:92504182-92504201 None:intergenic 25.0%
!!! TCATATGAATTCTTTTTGGT+GGG + Chr4:92505486-92505505 None:intergenic 25.0%
!!! TTGTCACTTTTTTGGTATAT+TGG - Chr4:92503955-92503974 MsG0480024025.01.T01:intron 25.0%
!!! TTGTGCTTACTTTTTAGTTA+AGG - Chr4:92503777-92503796 MsG0480024025.01.T01:intron 25.0%
AAGAATTCATATGAACTTCG+TGG - Chr4:92505492-92505511 MsG0480024025.01.T01:intron 30.0%
AGGTTACTGTAATAGTGTAA+CGG + Chr4:92506366-92506385 None:intergenic 30.0%
AGTCTTGAAGAATTGTACAA+TGG - Chr4:92502282-92502301 MsG0480024025.01.T01:CDS 30.0%
ATAACCAACTCAATGGAAAA+TGG + Chr4:92506878-92506897 None:intergenic 30.0%
ATATAAATAGTAGCGCCTTT+GGG - Chr4:92506639-92506658 MsG0480024025.01.T01:intron 30.0%
ATCAAATCAAAACTGAGAAG+TGG - Chr4:92504205-92504224 MsG0480024025.01.T01:intron 30.0%
ATCCTTTATAACCAACTCAA+TGG + Chr4:92506885-92506904 None:intergenic 30.0%
CCGATTTATCTGTTTATAGT+AGG - Chr4:92504302-92504321 MsG0480024025.01.T01:intron 30.0%
CGTAGTAATATGAAAGATCA+AGG + Chr4:92505775-92505794 None:intergenic 30.0%
CGTTCCATTAAAAATTTGGT+AGG - Chr4:92506290-92506309 MsG0480024025.01.T01:intron 30.0%
CTACTATTATCAATAACTCC+AGG + Chr4:92502738-92502757 None:intergenic 30.0%
GAATCACTCTAAGCAAAAAA+GGG + Chr4:92502911-92502930 None:intergenic 30.0%
GATTATCCAAAAGATAACTG+TGG - Chr4:92504676-92504695 MsG0480024025.01.T01:CDS 30.0%
GTAAGGATATGTTGAACAAA+CGG - Chr4:92504227-92504246 MsG0480024025.01.T01:intron 30.0%
GTCATGTAATGTAATATCCT+AGG + Chr4:92505317-92505336 None:intergenic 30.0%
GTCTTGAAGAATTGTACAAT+GGG - Chr4:92502283-92502302 MsG0480024025.01.T01:CDS 30.0%
GTTAGTATAAAGATACGCAA+TGG + Chr4:92505897-92505916 None:intergenic 30.0%
TAAAAGCTGGATGGAAAAAA+GGG - Chr4:92504534-92504553 MsG0480024025.01.T01:CDS 30.0%
TAAACGAATACACGTTTGAT+GGG + Chr4:92507180-92507199 None:intergenic 30.0%
TAAGAAGGTAGGATAAAAGA+AGG - Chr4:92503099-92503118 MsG0480024025.01.T01:intron 30.0%
TAATAGGTCACTTCAACATA+AGG + Chr4:92505559-92505578 None:intergenic 30.0%
TATATAAATAGTAGCGCCTT+TGG - Chr4:92506638-92506657 MsG0480024025.01.T01:intron 30.0%
TATATGTTTAGTCTGACGTT+AGG + Chr4:92505398-92505417 None:intergenic 30.0%
TCTCAAATTATTAGTGGAGT+CGG + Chr4:92502981-92503000 None:intergenic 30.0%
TGAATCACTCTAAGCAAAAA+AGG + Chr4:92502912-92502931 None:intergenic 30.0%
TGATAATCTGAAGATGAAGA+TGG + Chr4:92502160-92502179 None:intergenic 30.0%
TGCTCTCACAAATAAAACAT+TGG - Chr4:92504703-92504722 MsG0480024025.01.T01:CDS 30.0%
TGTGCAAATCCTAGAAAAAT+AGG - Chr4:92503868-92503887 MsG0480024025.01.T01:intron 30.0%
TTGACTATTGATGTAAAAGC+TGG - Chr4:92504521-92504540 MsG0480024025.01.T01:CDS 30.0%
! ATGGGCTATAATGAAAGTAT+AGG + Chr4:92505221-92505240 None:intergenic 30.0%
! ATTTTGCTCTTTTCTGATGA+TGG - Chr4:92503714-92503733 MsG0480024025.01.T01:intron 30.0%
! GTCCGAATTTTGTATTTTGT+AGG + Chr4:92502625-92502644 None:intergenic 30.0%
! GTTTTTACATTTCTCTCGAT+AGG - Chr4:92503579-92503598 MsG0480024025.01.T01:intron 30.0%
! TTATCATTCCACAGAACTTT+TGG - Chr4:92504104-92504123 MsG0480024025.01.T01:intron 30.0%
!! TTCCATTGAGTTGGTTATAA+AGG - Chr4:92506880-92506899 MsG0480024025.01.T01:intron 30.0%
!! TTGATAATGTGCTTAGAACA+TGG - Chr4:92503176-92503195 MsG0480024025.01.T01:intron 30.0%
AAAGGTTACCTTCAAAGAGA+AGG - Chr4:92504559-92504578 MsG0480024025.01.T01:CDS 35.0%
AAGGTTACCTTCAAAGAGAA+GGG - Chr4:92504560-92504579 MsG0480024025.01.T01:CDS 35.0%
AATGGTAGTTAACTACTGCT+TGG + Chr4:92505879-92505898 None:intergenic 35.0%
ACATTTCTCTCGATAGGATT+GGG - Chr4:92503585-92503604 MsG0480024025.01.T01:intron 35.0%
ACCCCAAGTTTATGAAATTG+GGG - Chr4:92502840-92502859 MsG0480024025.01.T01:intron 35.0%
ACCCCAATTTCATAAACTTG+GGG + Chr4:92502844-92502863 None:intergenic 35.0%
AGACCCCAAGTTTATGAAAT+TGG - Chr4:92502838-92502857 MsG0480024025.01.T01:intron 35.0%
AGGAATAGTGAGTTAGTGAT+AGG - Chr4:92505027-92505046 MsG0480024025.01.T01:intron 35.0%
ATACACCCTCAATCTTAGAA+GGG - Chr4:92503410-92503429 MsG0480024025.01.T01:intron 35.0%
ATACGAGAACATTGATCTAC+AGG - Chr4:92507010-92507029 MsG0480024025.01.T01:intron 35.0%
ATCAAAACTGAGAAGTGGTA+AGG - Chr4:92504210-92504229 MsG0480024025.01.T01:intron 35.0%
ATCAATAACTCCAGGCTAAA+AGG + Chr4:92502730-92502749 None:intergenic 35.0%
ATGGTAGTTAACTACTGCTT+GGG + Chr4:92505878-92505897 None:intergenic 35.0%
CAAGAAAACAATTGTGGACA+TGG - Chr4:92506804-92506823 MsG0480024025.01.T01:intron 35.0%
CTATTGATGTAAAAGCTGGA+TGG - Chr4:92504525-92504544 MsG0480024025.01.T01:CDS 35.0%
CTCCTTGTATTTGATTCTCA+TGG - Chr4:92503259-92503278 MsG0480024025.01.T01:intron 35.0%
CTTAAAATGTCTCGAAACCA+TGG - Chr4:92505337-92505356 MsG0480024025.01.T01:intron 35.0%
GAACATTGATCTACAGGTTA+AGG - Chr4:92507016-92507035 MsG0480024025.01.T01:intron 35.0%
GACCCCAAGTTTATGAAATT+GGG - Chr4:92502839-92502858 MsG0480024025.01.T01:intron 35.0%
GACCCCAATTTCATAAACTT+GGG + Chr4:92502845-92502864 None:intergenic 35.0%
GTAAAAGCTGGATGGAAAAA+AGG - Chr4:92504533-92504552 MsG0480024025.01.T01:CDS 35.0%
GTAAACGAATACACGTTTGA+TGG + Chr4:92507181-92507200 None:intergenic 35.0%
GTAATGTAATATCCTAGGTG+CGG + Chr4:92505312-92505331 None:intergenic 35.0%
GTTGGTTATAAAGGATCGAA+AGG - Chr4:92506889-92506908 MsG0480024025.01.T01:intron 35.0%
GTTTAAGTGGAATTTGATCC+AGG - Chr4:92503799-92503818 MsG0480024025.01.T01:intron 35.0%
GTTTGCTTACTTTAATCCCT+TGG - Chr4:92505442-92505461 MsG0480024025.01.T01:intron 35.0%
TACATTTCTCTCGATAGGAT+TGG - Chr4:92503584-92503603 MsG0480024025.01.T01:intron 35.0%
TCAATAACTCCAGGCTAAAA+GGG + Chr4:92502729-92502748 None:intergenic 35.0%
TCAGGTATAGTAAATTGAGG+AGG - Chr4:92504493-92504512 MsG0480024025.01.T01:CDS 35.0%
TCTGCTAACAACTTAACCAA+TGG - Chr4:92504148-92504167 MsG0480024025.01.T01:intron 35.0%
TGTAACAGTGTGGTATCTAA+TGG - Chr4:92503610-92503629 MsG0480024025.01.T01:intron 35.0%
TGTGCCTAAAGAGTAGAATT+GGG + Chr4:92505646-92505665 None:intergenic 35.0%
TTACCCAGCATGATTAACTA+CGG + Chr4:92502337-92502356 None:intergenic 35.0%
TTGTGCCTAAAGAGTAGAAT+TGG + Chr4:92505647-92505666 None:intergenic 35.0%
TTTCGCCAAGAAAACAATTG+TGG - Chr4:92506798-92506817 MsG0480024025.01.T01:intron 35.0%
! ACTACCATTTTCCATTGAGT+TGG - Chr4:92506871-92506890 MsG0480024025.01.T01:intron 35.0%
! CATGGTTTCGAGACATTTTA+AGG + Chr4:92505339-92505358 None:intergenic 35.0%
! CATGTCCACAATTGTTTTCT+TGG + Chr4:92506806-92506825 None:intergenic 35.0%
! TGACTCTTGTGTTTCTAAAG+TGG - Chr4:92505594-92505613 MsG0480024025.01.T01:intron 35.0%
!! GACTCTTGTGTTTCTAAAGT+GGG - Chr4:92505595-92505614 MsG0480024025.01.T01:intron 35.0%
!! TGAGAATGGTTTTGCAAAGA+AGG - Chr4:92502227-92502246 MsG0480024025.01.T01:CDS 35.0%
!!! AGAGGAGAGGATTTTGAAAT+AGG + Chr4:92505942-92505961 None:intergenic 35.0%
!!! TTTGTTTTGGTGGATATGGT+GGG + Chr4:92504178-92504197 None:intergenic 35.0%
!!! TTTTGGAACTAATGCCAAGT+AGG + Chr4:92505988-92506007 None:intergenic 35.0%
!!! TTTTGTTTTGGTGGATATGG+TGG + Chr4:92504179-92504198 None:intergenic 35.0%
AACAGAGGAACTTGAAACCA+AGG + Chr4:92505462-92505481 None:intergenic 40.0%
AACATTGGAAATCCCTGCTT+TGG - Chr4:92504718-92504737 MsG0480024025.01.T01:CDS 40.0%
AACTATCACTTTACCCCTCT+CGG + Chr4:92503998-92504017 None:intergenic 40.0%
AACTTGTGCAATCCCATTTC+AGG - Chr4:92504475-92504494 MsG0480024025.01.T01:CDS 40.0%
AATTGTGGACATGGTTGTGA+GGG - Chr4:92506813-92506832 MsG0480024025.01.T01:intron 40.0%
ACAGAGGAACTTGAAACCAA+GGG + Chr4:92505461-92505480 None:intergenic 40.0%
ACGTGGTTCTTCAATTTCTG+AGG - Chr4:92505666-92505685 MsG0480024025.01.T01:intron 40.0%
ACTACAAACTTGAGGGATGT+TGG + Chr4:92503931-92503950 None:intergenic 40.0%
ACTGTCAAGCAACATCAATG+AGG + Chr4:92507074-92507093 None:intergenic 40.0%
AGAACCGTAGTTAATCATGC+TGG - Chr4:92502330-92502349 MsG0480024025.01.T01:intron 40.0%
AGAGCATATCAAAGAGACAG+TGG - Chr4:92507246-92507265 MsG0480024025.01.T01:CDS 40.0%
AGCATGATTAACTACGGTTC+TGG + Chr4:92502331-92502350 None:intergenic 40.0%
AGGTCACTTCAACATAAGGA+TGG + Chr4:92505555-92505574 None:intergenic 40.0%
ATGACCAATATGGCGAAGAA+GGG - Chr4:92502073-92502092 MsG0480024025.01.T01:CDS 40.0%
ATGCCAATAACCAAACAACC+AGG - Chr4:92504815-92504834 MsG0480024025.01.T01:CDS 40.0%
ATTAAATGTGTGACCGAGAG+GGG - Chr4:92503982-92504001 MsG0480024025.01.T01:intron 40.0%
CACCTCAACAAAATCCTACT+TGG - Chr4:92505971-92505990 MsG0480024025.01.T01:intron 40.0%
CATACACCCTCAATCTTAGA+AGG - Chr4:92503409-92503428 MsG0480024025.01.T01:intron 40.0%
CCTCAGCAAAAATCTGATCT+AGG - Chr4:92504893-92504912 MsG0480024025.01.T01:intron 40.0%
CGACCCCAATTTCATAAACT+TGG + Chr4:92502846-92502865 None:intergenic 40.0%
CGCCATGAGAATCAAATACA+AGG + Chr4:92503264-92503283 None:intergenic 40.0%
GAACCGTAGTTAATCATGCT+GGG - Chr4:92502331-92502350 MsG0480024025.01.T01:intron 40.0%
GATGTAATTGGAGTCATGAC+TGG - Chr4:92507211-92507230 MsG0480024025.01.T01:CDS 40.0%
GATTAAATGTGTGACCGAGA+GGG - Chr4:92503981-92504000 MsG0480024025.01.T01:intron 40.0%
GATTTCTTTGGTCGTGAGAA+TGG - Chr4:92502213-92502232 MsG0480024025.01.T01:CDS 40.0%
GGTATAGTAAATTGAGGAGG+AGG - Chr4:92504496-92504515 MsG0480024025.01.T01:CDS 40.0%
GTCATGACTCCAATTACATC+AGG + Chr4:92507211-92507230 None:intergenic 40.0%
GTGTCCCAATTCTACTCTTT+AGG - Chr4:92505639-92505658 MsG0480024025.01.T01:intron 40.0%
GTTATTGGCATCCCTTCATT+GGG + Chr4:92504806-92504825 None:intergenic 40.0%
GTTCTGTTTGGGAGTTAAGA+AGG - Chr4:92503084-92503103 MsG0480024025.01.T01:intron 40.0%
TACACCCTCAATCTTAGAAG+GGG - Chr4:92503411-92503430 MsG0480024025.01.T01:intron 40.0%
TAGTCAGGTGTGACTACATT+TGG + Chr4:92504770-92504789 None:intergenic 40.0%
TATCCAAGCCAAAAGTTCTG+TGG + Chr4:92504115-92504134 None:intergenic 40.0%
TGACGTTAGGCAAACAAGTT+TGG + Chr4:92505385-92505404 None:intergenic 40.0%
TGATTAAATGTGTGACCGAG+AGG - Chr4:92503980-92503999 MsG0480024025.01.T01:intron 40.0%
TGCCAATAACCAAACAACCA+GGG - Chr4:92504816-92504835 MsG0480024025.01.T01:CDS 40.0%
TGGATGGAAAAAAGGGACAA+AGG - Chr4:92504541-92504560 MsG0480024025.01.T01:CDS 40.0%
TGGTAGTTAACTACTGCTTG+GGG + Chr4:92505877-92505896 None:intergenic 40.0%
TGTATTTGATTCTCATGGCG+AGG - Chr4:92503264-92503283 MsG0480024025.01.T01:intron 40.0%
TGTTTGGGAGTTAAGAAGGT+AGG - Chr4:92503088-92503107 MsG0480024025.01.T01:intron 40.0%
TTATTGGCATCCCTTCATTG+GGG + Chr4:92504805-92504824 None:intergenic 40.0%
TTGACATCAAGTATCCCTCA+AGG - Chr4:92504864-92504883 MsG0480024025.01.T01:intron 40.0%
TTGGGACACACAAGTAGTAT+TGG + Chr4:92505628-92505647 None:intergenic 40.0%
TTTCCAGGCATAGTTGAGTT+TGG - Chr4:92503664-92503683 MsG0480024025.01.T01:intron 40.0%
! AATACCAGGGAAGCATACTT+GGG - Chr4:92504984-92505003 MsG0480024025.01.T01:intron 40.0%
! ACAACATTTCCCTTTTAGCC+TGG - Chr4:92502717-92502736 MsG0480024025.01.T01:intron 40.0%
! CAAGTAGGATTTTGTTGAGG+TGG + Chr4:92505973-92505992 None:intergenic 40.0%
! CATCTGCCACAGTTATCTTT+TGG + Chr4:92504685-92504704 None:intergenic 40.0%
! CCTAGATCAGATTTTTGCTG+AGG + Chr4:92504896-92504915 None:intergenic 40.0%
! TAGCCTCGTTTCCTTTTCAA+GGG + Chr4:92505250-92505269 None:intergenic 40.0%
! TCATTGATGTTGCTTGACAG+TGG - Chr4:92507073-92507092 MsG0480024025.01.T01:intron 40.0%
! TGCCAAGTAGGATTTTGTTG+AGG + Chr4:92505976-92505995 None:intergenic 40.0%
! TTAGCCTCGTTTCCTTTTCA+AGG + Chr4:92505251-92505270 None:intergenic 40.0%
! TTTTGGACTATTTGCAGGGT+AGG - Chr4:92505007-92505026 MsG0480024025.01.T01:intron 40.0%
!! ATCACCCCTTCTAAGATTGA+GGG + Chr4:92503418-92503437 None:intergenic 40.0%
!! ATTCCACAGAACTTTTGGCT+TGG - Chr4:92504109-92504128 MsG0480024025.01.T01:intron 40.0%
!! CCTTTTCAAGGGGGAAAAAT+GGG + Chr4:92505239-92505258 None:intergenic 40.0%
!! GACACACAAGTAGTATTGGT+TGG + Chr4:92505624-92505643 None:intergenic 40.0%
!! TCCTTTTCAAGGGGGAAAAA+TGG + Chr4:92505240-92505259 None:intergenic 40.0%
!! TTCGTGCTTTGGTTCTGTTT+GGG - Chr4:92503073-92503092 MsG0480024025.01.T01:intron 40.0%
!! TTCTTTTTGGTGGGAAACAG+AGG + Chr4:92505477-92505496 None:intergenic 40.0%
!!! TGGGTTTTGGACTATTTGCA+GGG - Chr4:92505003-92505022 MsG0480024025.01.T01:intron 40.0%
!!! TTGGGTTTTGGACTATTTGC+AGG - Chr4:92505002-92505021 MsG0480024025.01.T01:intron 40.0%
AAAACCCAAGTATGCTTCCC+TGG + Chr4:92504991-92505010 None:intergenic 45.0%
AAGAAGGGTCTTCAATACGG+TGG - Chr4:92502088-92502107 MsG0480024025.01.T01:CDS 45.0%
AAGACCCTTCTTCGCCATAT+TGG + Chr4:92502080-92502099 None:intergenic 45.0%
ACACCTGCACCTGATGTAAT+TGG - Chr4:92507199-92507218 MsG0480024025.01.T01:CDS 45.0%
ACTCCAATTACATCAGGTGC+AGG + Chr4:92507205-92507224 None:intergenic 45.0%
AGAATCCTTCCATCCAAAGC+AGG + Chr4:92504734-92504753 None:intergenic 45.0%
AGATGGTTCAAACCCCAAGA+TGG - Chr4:92503474-92503493 MsG0480024025.01.T01:intron 45.0%
AGCACAAAGTCCCCAATGAA+GGG - Chr4:92504792-92504811 MsG0480024025.01.T01:CDS 45.0%
AGCAGCAGTATCTACCATCT+TGG + Chr4:92503491-92503510 None:intergenic 45.0%
AGTTTGTATTCGCTGCGTGA+TGG + Chr4:92507109-92507128 None:intergenic 45.0%
ATGTGAAGGGCTAGAATACC+AGG - Chr4:92504970-92504989 MsG0480024025.01.T01:intron 45.0%
CAATAACCAAACAACCAGGG+AGG - Chr4:92504819-92504838 MsG0480024025.01.T01:intron 45.0%
CAATTGTGGACATGGTTGTG+AGG - Chr4:92506812-92506831 MsG0480024025.01.T01:intron 45.0%
CACGCTCGTTATACTAGGAA+TGG - Chr4:92504641-92504660 MsG0480024025.01.T01:CDS 45.0%
CAGCAGTATCTACCATCTTG+GGG + Chr4:92503489-92503508 None:intergenic 45.0%
CGTTAGGCAAACAAGTTTGG+CGG + Chr4:92505382-92505401 None:intergenic 45.0%
CTCCCTGGTTGTTTGGTTAT+TGG + Chr4:92504821-92504840 None:intergenic 45.0%
CTGTCTATAATACCGCACCT+AGG - Chr4:92505297-92505316 MsG0480024025.01.T01:intron 45.0%
CTTGTCACCCTTCTCTTTGA+AGG + Chr4:92504570-92504589 None:intergenic 45.0%
GAATCCTTCCATCCAAAGCA+GGG + Chr4:92504733-92504752 None:intergenic 45.0%
GATGGTAGATACTGCTGCTA+AGG - Chr4:92503492-92503511 MsG0480024025.01.T01:intron 45.0%
GCAGCAGTATCTACCATCTT+GGG + Chr4:92503490-92503509 None:intergenic 45.0%
GCGAAGAAGGGTCTTCAATA+CGG - Chr4:92502085-92502104 MsG0480024025.01.T01:CDS 45.0%
GGATTGGGAATGTAACAGTG+TGG - Chr4:92503600-92503619 MsG0480024025.01.T01:intron 45.0%
GGTAGGATAAAAGAAGGCTC+TGG - Chr4:92503105-92503124 MsG0480024025.01.T01:intron 45.0%
GGTTATTGGCATCCCTTCAT+TGG + Chr4:92504807-92504826 None:intergenic 45.0%
GTGTGACTACATTTGGCAAC+TGG + Chr4:92504763-92504782 None:intergenic 45.0%
GTTGAGGTGGACATCTTTAG+AGG + Chr4:92505960-92505979 None:intergenic 45.0%
TCTACTCTTTAGGCACAACG+TGG - Chr4:92505649-92505668 MsG0480024025.01.T01:intron 45.0%
TCTTGTGTACTCGTACCCAA+AGG + Chr4:92506657-92506676 None:intergenic 45.0%
TGCTGAGGAGTTAACCTTGA+GGG + Chr4:92504881-92504900 None:intergenic 45.0%
TGTGAAGGGCTAGAATACCA+GGG - Chr4:92504971-92504990 MsG0480024025.01.T01:intron 45.0%
TTCAGGGACTTTCACAAACC+TGG + Chr4:92503820-92503839 None:intergenic 45.0%
TTCCTAGTATAACGAGCGTG+TGG + Chr4:92504641-92504660 None:intergenic 45.0%
TTGCTGAGGAGTTAACCTTG+AGG + Chr4:92504882-92504901 None:intergenic 45.0%
! AAAAGAAGGCTCTGGTGAGA+GGG - Chr4:92503113-92503132 MsG0480024025.01.T01:intron 45.0%
! AAATCCCTGCTTTGGATGGA+AGG - Chr4:92504726-92504745 MsG0480024025.01.T01:CDS 45.0%
! GAATACCAGGGAAGCATACT+TGG - Chr4:92504983-92505002 MsG0480024025.01.T01:intron 45.0%
! GGATATGGTGGGATATCCAT+TGG + Chr4:92504167-92504186 None:intergenic 45.0%
! TAAAAGAAGGCTCTGGTGAG+AGG - Chr4:92503112-92503131 MsG0480024025.01.T01:intron 45.0%
! TGTACAATGGGACTAGCAGA+AGG - Chr4:92502295-92502314 MsG0480024025.01.T01:intron 45.0%
! TTGAAGTGACGACCCCTTTT+TGG - Chr4:92502506-92502525 MsG0480024025.01.T01:intron 45.0%
! TTGGAAATCCCTGCTTTGGA+TGG - Chr4:92504722-92504741 MsG0480024025.01.T01:CDS 45.0%
! TTTAAAGTTCCCTTCCTCCC+TGG + Chr4:92504836-92504855 None:intergenic 45.0%
!! AGCCTCGTTTCCTTTTCAAG+GGG + Chr4:92505249-92505268 None:intergenic 45.0%
!! AGGGAAGCATACTTGGGTTT+TGG - Chr4:92504990-92505009 MsG0480024025.01.T01:intron 45.0%
!! CAGTTGCTTCCTTTGAAGCA+CGG - Chr4:92502938-92502957 MsG0480024025.01.T01:intron 45.0%
!! CATCACCCCTTCTAAGATTG+AGG + Chr4:92503419-92503438 None:intergenic 45.0%
!! CCCATTTTTCCCCCTTGAAA+AGG - Chr4:92505236-92505255 MsG0480024025.01.T01:intron 45.0%
!! CTTCCTTTGAAGCACGGATA+CGG - Chr4:92502944-92502963 MsG0480024025.01.T01:intron 45.0%
!! GTTCGTGCTTTGGTTCTGTT+TGG - Chr4:92503072-92503091 MsG0480024025.01.T01:intron 45.0%
AACCAAACAACCAGGGAGGA+AGG - Chr4:92504823-92504842 MsG0480024025.01.T01:intron 50.0%
ACCAAACAACCAGGGAGGAA+GGG - Chr4:92504824-92504843 MsG0480024025.01.T01:intron 50.0%
ACCAAAGCACGAACACTCCT+CGG + Chr4:92503066-92503085 None:intergenic 50.0%
AGAACGAGAAGAAGATGCCG+TGG + Chr4:92502125-92502144 None:intergenic 50.0%
AGGTTAAGGAGCAGCTCAAG+AGG - Chr4:92507030-92507049 MsG0480024025.01.T01:intron 50.0%
ATATCAGCTGGGATGATGCC+AGG + Chr4:92504596-92504615 None:intergenic 50.0%
CACCACACGCTCGTTATACT+AGG - Chr4:92504636-92504655 MsG0480024025.01.T01:CDS 50.0%
GAGCACAAAGTCCCCAATGA+AGG - Chr4:92504791-92504810 MsG0480024025.01.T01:CDS 50.0%
GATATCGCAGTCAGACTCCA+TGG + Chr4:92505357-92505376 None:intergenic 50.0%
GCATCTTCTTCTCGTTCTCG+CGG - Chr4:92502127-92502146 MsG0480024025.01.T01:CDS 50.0%
GGGACTTTGTGCTCATAGTC+AGG + Chr4:92504785-92504804 None:intergenic 50.0%
GGTCCAAACTCAACTATGCC+TGG + Chr4:92503670-92503689 None:intergenic 50.0%
GGTTAAGGAGCAGCTCAAGA+GGG - Chr4:92507031-92507050 MsG0480024025.01.T01:intron 50.0%
TATTAGTGGAGTCGGCGTGT+CGG + Chr4:92502973-92502992 None:intergenic 50.0%
TCCCCCTTGAAAAGGAAACG+AGG - Chr4:92505244-92505263 MsG0480024025.01.T01:intron 50.0%
TGTCCGTATCCGTGCTTCAA+AGG + Chr4:92502950-92502969 None:intergenic 50.0%
TTGTGAGGGTTGTTCGTGCT+TGG - Chr4:92506827-92506846 MsG0480024025.01.T01:intron 50.0%
! AAAGAAGGCTCTGGTGAGAG+GGG - Chr4:92503114-92503133 MsG0480024025.01.T01:intron 50.0%
! GGTGGACATCTTTAGAGGAG+AGG + Chr4:92505955-92505974 None:intergenic 50.0%
!! ATATGTGTCGGTGTCGTGTC+GGG - Chr4:92503029-92503048 MsG0480024025.01.T01:intron 50.0%
!! GATATGTGTCGGTGTCGTGT+CGG - Chr4:92503028-92503047 MsG0480024025.01.T01:intron 50.0%
!! GCCTCGTTTCCTTTTCAAGG+GGG + Chr4:92505248-92505267 None:intergenic 50.0%
ACGAGAAGAAGATGCCGTGG+AGG + Chr4:92502122-92502141 None:intergenic 55.0%
AGGAGCAGCTCAAGAGGGAA+TGG - Chr4:92507036-92507055 MsG0480024025.01.T01:intron 55.0%
CGAGAAGAAGATGCCGTGGA+GGG + Chr4:92502121-92502140 None:intergenic 55.0%
GAGAAGGGTGACAAGAAGCC+TGG - Chr4:92504575-92504594 MsG0480024025.01.T01:CDS 55.0%
GAGAGGGGAGGCAAAGGAAT+GGG - Chr4:92503129-92503148 MsG0480024025.01.T01:intron 55.0%
GCACGAACACTCCTCGGATT+AGG + Chr4:92503060-92503079 None:intergenic 55.0%
TCCCTTCCTCCCTGGTTGTT+TGG + Chr4:92504828-92504847 None:intergenic 55.0%
TGAGAGGGGAGGCAAAGGAA+TGG - Chr4:92503128-92503147 MsG0480024025.01.T01:intron 55.0%
!! TATGTGTCGGTGTCGTGTCG+GGG - Chr4:92503030-92503049 MsG0480024025.01.T01:intron 55.0%
!! TCCGAGGAGTGTTCGTGCTT+TGG - Chr4:92503062-92503081 MsG0480024025.01.T01:intron 55.0%
AGAAGATGCCGTGGAGGGAG+CGG + Chr4:92502116-92502135 None:intergenic 60.0%
GGGGAGGCAAAGGAATGGGA+AGG - Chr4:92503133-92503152 MsG0480024025.01.T01:intron 60.0%
TCTGGTGAGAGGGGAGGCAA+AGG - Chr4:92503123-92503142 MsG0480024025.01.T01:intron 60.0%
! GAAGGCTCTGGTGAGAGGGG+AGG - Chr4:92503117-92503136 MsG0480024025.01.T01:intron 65.0%
! GTCGGGGCACTCCTAATCCG+AGG - Chr4:92503046-92503065 MsG0480024025.01.T01:intron 65.0%
!! CGGTGGTGCCGCTCCCTCCA+CGG - Chr4:92502105-92502124 MsG0480024025.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 92502073 92507276 92502073 ID=MsG0480024025.01;Name=MsG0480024025.01
Chr4 mRNA 92502073 92507276 92502073 ID=MsG0480024025.01.T01;Parent=MsG0480024025.01;Name=MsG0480024025.01.T01;_AED=0.23;_eAED=0.25;_QI=0|0|0|0.75|0.33|0.25|4|0|268
Chr4 exon 92507124 92507276 92507124 ID=MsG0480024025.01.T01:exon:18479;Parent=MsG0480024025.01.T01
Chr4 exon 92504464 92504837 92504464 ID=MsG0480024025.01.T01:exon:18480;Parent=MsG0480024025.01.T01
Chr4 exon 92504325 92504371 92504325 ID=MsG0480024025.01.T01:exon:18481;Parent=MsG0480024025.01.T01
Chr4 exon 92502073 92502305 92502073 ID=MsG0480024025.01.T01:exon:18482;Parent=MsG0480024025.01.T01
Chr4 CDS 92507124 92507276 92507124 ID=MsG0480024025.01.T01:cds;Parent=MsG0480024025.01.T01
Chr4 CDS 92504464 92504837 92504464 ID=MsG0480024025.01.T01:cds;Parent=MsG0480024025.01.T01
Chr4 CDS 92504325 92504371 92504325 ID=MsG0480024025.01.T01:cds;Parent=MsG0480024025.01.T01
Chr4 CDS 92502073 92502305 92502073 ID=MsG0480024025.01.T01:cds;Parent=MsG0480024025.01.T01
Gene Sequence

>MsG0480024025.01.T01

ATGACCAATATGGCGAAGAAGGGTCTTCAATACGGTGGTGCCGCTCCCTCCACGGCATCTTCTTCTCGTTCTCGCGGTAACGCTCCATCTTCATCTTCAGATTATCAGTATAATCATCGCTCTGCTGATGATAAGACAATGATTTCTTTGGTCGAGGAGGTGTTGACTATTGATGTAAAAGCTGGATGGAAAAAAGGGACAAAGGTTACCTTCAAAGAGAAGGGTGACAAGAAGCCTGGCATCATCCCAGCTGATATTATTTTTGTGATTGACGAGACACCACACGCTCGTTATACTAGGAATGGAAATGATCTTGTGATTATCCAAAAGATAACTGTGGCAGATGCTCTCACAAATAAAACATTGGAAATCCCTGCTTTGGATGGAAGGATTCTTTTTGTCCAGTTGCCAAATGTAGTCACACCTGACTATGAGCACAAAGTCCCCAATGAAGGGATGCCAATAACCAAACAACCAGGGAGGAAGGGAACTTTAAAAATCAAATTTGACATCAAGTATCCCTCAAGGGCTAGAATACCAGGGAAGCATACTTGGGTTTTGGACTATTTGCAGGCTCAAGAGGGAATGGTGTTCACGATTTCCTCATTGATGTTGCTTGACAGTGGTTCGTATCGACCATCACGCAGCGAATACAAACTGAATTTCATAATCAACACAAAAGTCAAACTATCTAAAACTGCTTTAGTCCCATCAAACGTGTATTCGTTTACACCTGCACCTGATGTAATTGGAGTCATGACTGGAGTGTGTGTTAAAGAGCATATCAAAGAGACAGTGGAAAAATAA
Protein sequence

>MsG0480024025.01.T01

MTNMAKKGLQYGGAAPSTASSSRSRGNAPSSSSDYQYNHRSADDKTMISLVEEVLTIDVKAGWKKGTKVTFKEKGDKKPGIIPADIIFVIDETPHARYTRNGNDLVIIQKITVADALTNKTLEIPALDGRILFVQLPNVVTPDYEHKVPNEGMPITKQPGRKGTLKIKFDIKYPSRARIPGKHTWVLDYLQAQEGMVFTISSLMLLDSGSYRPSRSEYKLNFIINTKVKLSKTALVPSNVYSFTPAPDVIGVMTGVCVKEHIKETVEK*