AlfalfaGEDB | MsG0580026191.01

M. sativa cultivar ZhongmuNo.1 / MsG0580026191.01

KEGG: -
GO: GO:0003677 GO:0006355
PFAM: PF02701

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580026191.01.T01	XP_003613823.1	85.117	383	41	2	1	379	1	371	0	636

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580026191.01.T01	Q8W1E3	44.599	287	133	9	106	379	25	298	1.78E-60	200

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580026191.01.T01	G7KGL5	85.117	383	41	2	1	379	1	371	0.0	636

TFs/TRs:

Gene ID	Type	Classification
MsG0580026191.01.T01	TF	C2C2-Dof

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0380013116.01	MsG0580026191.01	0.832663	8.311008e-56	9.352404e-53
MsG0580026191.01	MsG0580026192.01	0.830622	2.647285e-55	2.804219e-52
MsG0580026191.01	MsG0780041812.01	0.817509	3.178141e-52	2.319086e-49
MsG0580026191.01	MsG0880043763.01	0.824634	7.258265e-54	6.466325e-51

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580026191.01.T01	MTR_5g041380	85.117	383	41	2	1	379	1	371	0.0	636
MsG0580026191.01.T01	MTR_5g041400	83.377	379	47	2	1	379	1	363	0.0	624
MsG0580026191.01.T01	MTR_5g041530	63.980	397	109	11	1	379	1	381	9.34e-149	426
MsG0580026191.01.T01	MTR_5g041420	61.697	389	72	10	1	379	1	322	2.01e-127	369
MsG0580026191.01.T01	MTR_4g082060	38.776	490	154	20	4	378	6	464	4.63e-75	240
MsG0580026191.01.T01	MTR_7g010950	33.400	497	194	17	2	377	4	484	4.93e-63	209
MsG0580026191.01.T01	MTR_3g435480	36.772	378	127	14	101	377	97	463	7.29e-53	182
MsG0580026191.01.T01	MTR_6g012450	33.202	506	188	19	4	377	6	493	7.73e-53	182
MsG0580026191.01.T01	MTR_8g044220	29.590	463	204	19	4	379	12	439	1.60e-39	146
MsG0580026191.01.T01	MTR_6g027460	58.586	99	35	2	96	188	51	149	3.32e-32	124
MsG0580026191.01.T01	MTR_7g086780	29.973	367	153	13	103	379	70	422	1.67e-30	121
MsG0580026191.01.T01	MTR_2g016030	69.231	65	20	0	124	188	36	100	1.11e-28	110
MsG0580026191.01.T01	MTR_6g027450	54.167	96	38	2	99	188	47	142	5.57e-28	112
MsG0580026191.01.T01	MTR_8g079060	61.905	63	24	0	135	197	29	91	8.86e-22	93.2
MsG0580026191.01.T01	MTR_4g022370	51.429	70	34	0	119	188	66	135	1.17e-21	95.5
MsG0580026191.01.T01	MTR_8g027295	56.250	64	28	0	125	188	14	77	1.34e-21	93.6
MsG0580026191.01.T01	MTR_2g093220	57.353	68	29	0	121	188	26	93	2.15e-21	93.6
MsG0580026191.01.T01	MTR_1g077600	66.038	53	18	0	135	187	43	95	5.01e-21	92.0
MsG0580026191.01.T01	MTR_3g091820	60.000	60	24	0	132	191	40	99	5.01e-21	92.8
MsG0580026191.01.T01	MTR_1g077600	66.038	53	18	0	135	187	43	95	6.02e-21	92.4
MsG0580026191.01.T01	MTR_2g096740	64.815	54	19	0	135	188	77	130	6.06e-21	92.4
MsG0580026191.01.T01	MTR_2g096740	64.815	54	19	0	135	188	62	115	6.15e-21	92.0
MsG0580026191.01.T01	MTR_8g479350	66.667	54	18	0	135	188	68	121	6.82e-21	92.8
MsG0580026191.01.T01	MTR_4g089095	61.818	55	21	0	135	189	50	104	7.69e-21	92.0
MsG0580026191.01.T01	MTR_4g109980	66.038	53	18	0	133	185	38	90	8.10e-21	92.4
MsG0580026191.01.T01	MTR_4g089095	61.818	55	21	0	135	189	16	70	8.53e-21	91.3
MsG0580026191.01.T01	MTR_4g088580	71.154	52	15	0	137	188	57	108	1.49e-20	92.4
MsG0580026191.01.T01	MTR_8g015840	67.308	52	17	0	135	186	20	71	1.56e-20	89.4
MsG0580026191.01.T01	MTR_4g461080	61.538	65	21	1	127	187	17	81	1.66e-20	90.9
MsG0580026191.01.T01	MTR_2g013370	68.519	54	16	1	135	188	46	98	2.08e-20	90.5
MsG0580026191.01.T01	MTR_7g059400	51.429	70	34	0	119	188	60	129	2.42e-20	91.7
MsG0580026191.01.T01	MTR_4g063780	43.269	104	58	1	119	221	59	162	2.47e-20	91.3
MsG0580026191.01.T01	MTR_7g024670	68.627	51	16	0	137	187	79	129	2.94e-20	91.7
MsG0580026191.01.T01	MTR_8g068210	45.882	85	38	1	104	188	9	85	4.32e-20	90.5
MsG0580026191.01.T01	MTR_2g059540	67.347	49	16	0	135	183	31	79	9.63e-20	87.0
MsG0580026191.01.T01	MTR_3g090430	62.712	59	18	1	130	188	50	104	1.37e-19	89.0
MsG0580026191.01.T01	MTR_1g056810	56.164	73	30	2	136	208	13	83	2.09e-19	87.8
MsG0580026191.01.T01	MTR_5g031440	60.000	55	22	0	131	185	39	93	9.63e-19	86.7
MsG0580026191.01.T01	MTR_2g014060	66.000	50	17	0	137	186	27	76	1.21e-18	86.3
MsG0580026191.01.T01	MTR_2g014170	67.347	49	16	0	135	183	45	93	1.32e-18	85.9
MsG0580026191.01.T01	MTR_3g077750	64.706	51	18	0	135	185	61	111	4.32e-18	84.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580026191.01.T01	AT5G62430	44.599	287	133	9	106	379	25	298	1.81e-61	200
MsG0580026191.01.T01	AT3G47500	33.678	484	175	18	2	379	5	448	4.71e-53	182
MsG0580026191.01.T01	AT5G39660	32.613	463	213	16	4	377	3	455	2.86e-48	170
MsG0580026191.01.T01	AT5G39660	32.613	463	213	16	4	377	3	455	2.86e-48	170
MsG0580026191.01.T01	AT5G39660	32.613	463	213	16	4	377	3	455	2.86e-48	170
MsG0580026191.01.T01	AT1G69570	34.140	413	214	17	4	379	6	397	5.61e-43	154
MsG0580026191.01.T01	AT1G26790	33.750	320	171	11	90	379	64	372	3.02e-39	144
MsG0580026191.01.T01	AT2G34140	55.914	93	36	2	101	188	19	111	6.12e-31	116
MsG0580026191.01.T01	AT1G29160	69.697	66	20	0	123	188	50	115	6.74e-31	116
MsG0580026191.01.T01	AT3G55370	35.821	134	75	1	57	190	9	131	9.39e-24	100
MsG0580026191.01.T01	AT3G55370	35.821	134	75	1	57	190	9	131	1.71e-23	100
MsG0580026191.01.T01	AT1G51700	51.190	84	31	1	111	194	19	92	4.24e-22	93.2
MsG0580026191.01.T01	AT3G55370	47.126	87	45	1	105	190	90	176	4.34e-22	96.7
MsG0580026191.01.T01	AT5G60200	57.143	70	30	0	125	194	45	114	4.64e-22	94.7
MsG0580026191.01.T01	AT3G61850	36.765	136	81	1	90	225	17	147	1.43e-21	94.0
MsG0580026191.01.T01	AT3G61850	36.765	136	81	1	90	225	17	147	1.43e-21	94.0
MsG0580026191.01.T01	AT3G61850	36.765	136	81	1	90	225	29	159	1.54e-21	94.0
MsG0580026191.01.T01	AT3G21270	69.811	53	16	0	135	187	29	81	1.72e-21	91.7
MsG0580026191.01.T01	AT3G61850	36.765	136	81	1	90	225	17	147	2.09e-21	94.0
MsG0580026191.01.T01	AT3G61850	36.765	136	81	1	90	225	29	159	2.20e-21	94.0
MsG0580026191.01.T01	AT5G66940	69.811	53	16	0	135	187	32	84	4.77e-21	91.3
MsG0580026191.01.T01	AT2G28510	57.143	70	30	0	125	194	38	107	5.67e-21	92.4
MsG0580026191.01.T01	AT5G60850	66.071	56	19	0	135	190	51	106	6.67e-21	92.4
MsG0580026191.01.T01	AT5G02460	52.857	70	33	0	119	188	79	148	6.72e-21	94.0
MsG0580026191.01.T01	AT5G65590	48.387	93	44	2	99	190	7	96	8.69e-21	92.4
MsG0580026191.01.T01	AT3G50410	69.231	52	16	0	135	186	30	81	1.70e-20	90.1
MsG0580026191.01.T01	AT4G24060	63.158	57	21	0	132	188	50	106	1.84e-20	91.7
MsG0580026191.01.T01	AT1G07640	66.038	53	18	0	135	187	21	73	2.52e-20	90.1
MsG0580026191.01.T01	AT3G45610	59.016	61	25	0	131	191	36	96	2.90e-20	89.4
MsG0580026191.01.T01	AT1G07640	66.038	53	18	0	135	187	77	129	2.94e-20	90.9
MsG0580026191.01.T01	AT2G28810	52.239	67	31	1	121	186	62	128	2.95e-20	90.9
MsG0580026191.01.T01	AT1G28310	66.667	54	18	0	135	188	27	80	3.08e-20	90.5
MsG0580026191.01.T01	AT1G07640	66.038	53	18	0	135	187	85	137	3.53e-20	90.9
MsG0580026191.01.T01	AT2G28810	52.239	67	31	1	121	186	79	145	3.90e-20	90.9
MsG0580026191.01.T01	AT1G28310	66.667	54	18	0	135	188	51	104	3.93e-20	90.9
MsG0580026191.01.T01	AT2G37590	58.621	58	24	0	131	188	85	142	5.04e-20	90.5
MsG0580026191.01.T01	AT4G00940	59.677	62	25	0	131	192	64	125	1.97e-19	88.2
MsG0580026191.01.T01	AT4G00940	59.677	62	25	0	131	192	64	125	1.97e-19	88.2
MsG0580026191.01.T01	AT4G00940	59.677	62	25	0	131	192	64	125	1.97e-19	88.2
MsG0580026191.01.T01	AT1G64620	50.000	68	30	1	116	183	34	97	3.41e-19	88.2
MsG0580026191.01.T01	AT1G21340	49.398	83	39	1	118	200	21	100	3.59e-19	86.7
MsG0580026191.01.T01	AT4G38000	54.688	64	28	1	130	192	36	99	3.93e-19	86.3
MsG0580026191.01.T01	AT3G52440	64.151	53	19	0	136	188	26	78	4.00e-19	86.3
MsG0580026191.01.T01	AT3G52440	64.151	53	19	0	136	188	45	97	6.16e-19	86.3
MsG0580026191.01.T01	AT1G47655	67.347	49	16	0	135	183	29	77	1.71e-18	83.6
MsG0580026191.01.T01	AT5G62940	67.347	49	16	0	137	185	75	123	6.31e-18	84.7
MsG0580026191.01.T01	AT2G46590	59.615	52	21	0	131	182	64	115	1.14e-17	84.0
MsG0580026191.01.T01	AT2G46590	59.615	52	21	0	131	182	76	127	1.20e-17	84.0
MsG0580026191.01.T01	AT4G21050	50.725	69	32	1	120	188	11	77	2.79e-17	80.1
MsG0580026191.01.T01	AT4G21040	45.679	81	40	2	137	216	27	104	2.45e-15	75.1
MsG0580026191.01.T01	AT4G21080	55.769	52	23	0	137	188	27	78	1.23e-14	73.6

Find 72 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTCAATGGATTTGCATCTA+TGG	0.224783	5:+32073679	MsG0580026191.01.T01:CDS
GTTCCAAGTAAACCTACTTT+AGG	0.234419	5:+32073506	MsG0580026191.01.T01:CDS
AAACCCTTTGCATCTTCATT+AGG	0.263138	5:-32073617	None:intergenic
TCTTCAATTCTCAATTTCTT+AGG	0.264262	5:-32073593	None:intergenic
GCAAAAGCTGCCAGAGATAT+TGG	0.290195	5:+32073144	MsG0580026191.01.T01:CDS
ACCACCATAGTATGCTATAT+TGG	0.313954	5:-32073435	None:intergenic
AACCCTTTGCATCTTCATTA+GGG	0.318049	5:-32073616	None:intergenic
CTTGTCAAGAAAATCAATAT+TGG	0.352841	5:+32073317	MsG0580026191.01.T01:CDS
TGCCAGAGATATTGGACTTC+CGG	0.368326	5:+32073152	MsG0580026191.01.T01:CDS
TTCCAAGTAAACCTACTTTA+GGG	0.369270	5:+32073507	MsG0580026191.01.T01:CDS
ATGAGTAGTGTCTTGACCTT+TGG	0.369998	5:+32073263	MsG0580026191.01.T01:CDS
TTCCCTAAAGTAGGTTTACT+TGG	0.378626	5:-32073509	None:intergenic
AGTGAAGATGAAGACATAAT+AGG	0.382456	5:-32073296	None:intergenic
ACATGATTCAAAGAGATATA+AGG	0.401349	5:+32072429	MsG0580026191.01.T01:CDS
CAACCCAATATAGCATACTA+TGG	0.408858	5:+32073431	MsG0580026191.01.T01:CDS
CCACCATAGTATGCTATATT+GGG	0.415830	5:-32073434	None:intergenic
ATCAATTTCAGGAACAATCA+AGG	0.419402	5:+32072844	MsG0580026191.01.T01:intron
CCTTGATAAAGCTGCAGGAT+TGG	0.440224	5:-32073750	None:intergenic
TTCAATGGATTTGCATCTAT+GGG	0.443267	5:+32073680	MsG0580026191.01.T01:CDS
TTGCATCTATGGGTGGTGAT+AGG	0.444216	5:+32073690	MsG0580026191.01.T01:CDS
GAAGTTTCTGTTTCTGATGA+GGG	0.444348	5:-32072972	None:intergenic
ACACAGGATAACACATTGTT+GGG	0.445576	5:-32073403	None:intergenic
TAACACATTGTTGGGTTCCA+TGG	0.452271	5:-32073395	None:intergenic
GACACAGGATAACACATTGT+TGG	0.452547	5:-32073404	None:intergenic
CTTGAATGTTTCCCTAAAGT+AGG	0.465584	5:-32073518	None:intergenic
CTCCGGAAGTCCAATATCTC+TGG	0.468706	5:-32073154	None:intergenic
CTCAATAAGGCTTGAAGATG+TGG	0.477034	5:-32072937	None:intergenic
CATACTTCTCGTGGTTCCTC+CGG	0.479008	5:-32073171	None:intergenic
GCAGAAGTGACGGGGCTGGT+TGG	0.486295	5:-32073123	None:intergenic
AGAAGTTTCTGTTTCTGATG+AGG	0.487360	5:-32072973	None:intergenic
TTTGAAGAATTCACTTCAAG+TGG	0.499476	5:-32072403	None:intergenic
GTGGTTGTTTAGTCCCATCA+TGG	0.499829	5:+32073453	MsG0580026191.01.T01:CDS
TATATCTCTTTGAATCATGT+TGG	0.511854	5:-32072426	None:intergenic
TTCCCAATCAAATCCTCTCA+TGG	0.512251	5:-32073784	None:intergenic
CCAATCCTGCAGCTTTATCA+AGG	0.521791	5:+32073750	MsG0580026191.01.T01:CDS
AGAAGTATGCTTGTAGGTGC+AGG	0.528984	5:+32073185	MsG0580026191.01.T01:CDS
TTAGGGAAACATTCAAGAGA+TGG	0.534355	5:+32073524	MsG0580026191.01.T01:CDS
AAGTTTCTGTTTCTGATGAG+GGG	0.537740	5:-32072971	None:intergenic
TAGGTTGTACGCTCCATGAT+GGG	0.544678	5:-32073466	None:intergenic
AGTTTCTGTTTCTGATGAGG+GGG	0.550139	5:-32072970	None:intergenic
TGAGACCTTGATAAAGCTGC+AGG	0.554542	5:-32073755	None:intergenic
TCATAATCAAGTACTGAGGT+AGG	0.557713	5:-32072873	None:intergenic
CATAGTATGCTATATTGGGT+TGG	0.557895	5:-32073430	None:intergenic
GAGAAATCTTGATGAGCAAG+AGG	0.571155	5:-32072343	None:intergenic
GACCCTAATGAAGATGCAAA+GGG	0.573223	5:+32073614	MsG0580026191.01.T01:CDS
CTAGGAAACAAGAGTGGTGG+AGG	0.573390	5:+32073653	MsG0580026191.01.T01:CDS
ACCACGAGAAGTATGCTTGT+AGG	0.578460	5:+32073179	MsG0580026191.01.T01:CDS
ATAGGTTGTACGCTCCATGA+TGG	0.581466	5:-32073467	None:intergenic
AATAAGGCTTGAAGATGTGG+TGG	0.584261	5:-32072934	None:intergenic
GGGTTCCATGGAAACTGTTG+TGG	0.587185	5:-32073383	None:intergenic
AGACCCTAATGAAGATGCAA+AGG	0.590368	5:+32073613	MsG0580026191.01.T01:CDS
GGTCTCATGTGTTCCATGAG+AGG	0.592053	5:+32073771	MsG0580026191.01.T01:CDS
ACACAAGATTGAGTTGCGAT+AGG	0.596525	5:-32073485	None:intergenic
AATAGGAGAATCTGATCCAA+AGG	0.598047	5:-32073279	None:intergenic
TTGACGATTATGTGAGACAT+CGG	0.603312	5:-32073240	None:intergenic
ATTGGCTTTCAATACTGATG+AGG	0.608635	5:-32073732	None:intergenic
AAACTCTGCGGAATAATCAT+CGG	0.614237	5:-32072314	None:intergenic
ATAAGGCTTGAAGATGTGGT+GGG	0.622284	5:-32072933	None:intergenic
TGAACAAAGTGATATGTCAC+AGG	0.628815	5:+32073019	MsG0580026191.01.T01:CDS
AATGGATTTGCATCTATGGG+TGG	0.631829	5:+32073683	MsG0580026191.01.T01:CDS
ACCTACAAGCATACTTCTCG+TGG	0.650658	5:-32073180	None:intergenic
GGGAGTGTTTAAATCCTCTG+TGG	0.652740	5:-32072913	None:intergenic
CCCAATATAGCATACTATGG+TGG	0.653975	5:+32073434	MsG0580026191.01.T01:CDS
ACACTAGGAAACAAGAGTGG+TGG	0.656394	5:+32073650	MsG0580026191.01.T01:CDS
AAATCTTGATGAGCAAGAGG+AGG	0.659290	5:-32072340	None:intergenic
ATATTGGGTTGGAATGACAC+AGG	0.664359	5:-32073419	None:intergenic
CAGAGATATTGGACTTCCGG+AGG	0.693631	5:+32073155	MsG0580026191.01.T01:CDS
TTCTTCATAATCAAGTACTG+AGG	0.698198	5:-32072877	None:intergenic
GGGTGGTGATAGGAATCATG+TGG	0.704890	5:+32073700	MsG0580026191.01.T01:CDS
TTAACACTAGGAAACAAGAG+TGG	0.767808	5:+32073647	MsG0580026191.01.T01:CDS
AAGAGGAGGAGAAAACTCTG+CGG	0.769613	5:-32072326	None:intergenic
AGCCTCAAAACAAACCACAG+AGG	0.778500	5:+32072899	MsG0580026191.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAATTAATTACTTATAGTT+AGG	+	Chr5:32072488-32072507	MsG0580026191.01.T01:intron	10.0%
!!	AATTATTGTTTATCAATTTC+AGG	+	Chr5:32072833-32072852	MsG0580026191.01.T01:intron	15.0%
!!	TGATAAACAATAATTAGATT+AGG	-	Chr5:32072828-32072847	None:intergenic	15.0%
!!!	TGAAAAATATACAAAGTTTT+TGG	+	Chr5:32072663-32072682	MsG0580026191.01.T01:intron	15.0%
!!	ATAGACTTCAAAATATGAAT+TGG	-	Chr5:32072744-32072763	None:intergenic	20.0%
!!!	AAGAAGAGATTTTATTCTTA+CGG	-	Chr5:32073214-32073233	None:intergenic	20.0%
!!!	TTTTGGTGATAAAATTCTTA+TGG	+	Chr5:32072617-32072636	MsG0580026191.01.T01:intron	20.0%
!	ACATGATTCAAAGAGATATA+AGG	+	Chr5:32072429-32072448	MsG0580026191.01.T01:CDS	25.0%
!	CTTGTCAAGAAAATCAATAT+TGG	+	Chr5:32073317-32073336	MsG0580026191.01.T01:CDS	25.0%
!	TATATCTCTTTGAATCATGT+TGG	-	Chr5:32072429-32072448	None:intergenic	25.0%
!	TCTTCAATTCTCAATTTCTT+AGG	-	Chr5:32073596-32073615	None:intergenic	25.0%
!!	ACTTTGTTCATCAATTTTAG+TGG	-	Chr5:32073009-32073028	None:intergenic	25.0%
!!	GATTCAACCATAAAACTTTT+CGG	+	Chr5:32072265-32072284	MsG0580026191.01.T01:CDS	25.0%
!!	TAACTTTGTGGTTCATATTT+TGG	+	Chr5:32072797-32072816	MsG0580026191.01.T01:intron	25.0%
	AGTGAAGATGAAGACATAAT+AGG	-	Chr5:32073299-32073318	None:intergenic	30.0%
	ATCAATTTCAGGAACAATCA+AGG	+	Chr5:32072844-32072863	MsG0580026191.01.T01:intron	30.0%
	TAAGTTTCATTGCAATCTTG+TGG	+	Chr5:32072534-32072553	MsG0580026191.01.T01:intron	30.0%
	TGAAGTCTATAATCCTAAAC+TGG	+	Chr5:32072754-32072773	MsG0580026191.01.T01:intron	30.0%
	TTCCAAGTAAACCTACTTTA+GGG	+	Chr5:32073507-32073526	MsG0580026191.01.T01:CDS	30.0%
	TTTGAAGAATTCACTTCAAG+TGG	-	Chr5:32072406-32072425	None:intergenic	30.0%
!	GGACATGAAACAATTTTGTT+AGG	-	Chr5:32073053-32073072	None:intergenic	30.0%
!	TTCAATGGATTTGCATCTAT+GGG	+	Chr5:32073680-32073699	MsG0580026191.01.T01:CDS	30.0%
!	TTCTTCATAATCAAGTACTG+AGG	-	Chr5:32072880-32072899	None:intergenic	30.0%
!	TTTCAATGGATTTGCATCTA+TGG	+	Chr5:32073679-32073698	MsG0580026191.01.T01:CDS	30.0%
!!	AAGATGCAAAGGGTTTTAAT+TGG	+	Chr5:32073624-32073643	MsG0580026191.01.T01:CDS	30.0%
!!!	GGTTTTAATTGGTTAACACT+AGG	+	Chr5:32073635-32073654	MsG0580026191.01.T01:CDS	30.0%
!!!	GTGCACTTTTTTCATCTTTT+TGG	+	Chr5:32072600-32072619	MsG0580026191.01.T01:intron	30.0%
	AAACCCTTTGCATCTTCATT+AGG	-	Chr5:32073620-32073639	None:intergenic	35.0%
	AAACTCTGCGGAATAATCAT+CGG	-	Chr5:32072317-32072336	None:intergenic	35.0%
	AACCCTTTGCATCTTCATTA+GGG	-	Chr5:32073619-32073638	None:intergenic	35.0%
	AATAGGAGAATCTGATCCAA+AGG	-	Chr5:32073282-32073301	None:intergenic	35.0%
	ACACAGGATAACACATTGTT+GGG	-	Chr5:32073406-32073425	None:intergenic	35.0%
	ACCACCATAGTATGCTATAT+TGG	-	Chr5:32073438-32073457	None:intergenic	35.0%
	CAACCCAATATAGCATACTA+TGG	+	Chr5:32073431-32073450	MsG0580026191.01.T01:CDS	35.0%
	CATAGTATGCTATATTGGGT+TGG	-	Chr5:32073433-32073452	None:intergenic	35.0%
	CCACCATAGTATGCTATATT+GGG	-	Chr5:32073437-32073456	None:intergenic	35.0%
	CTTGAATGTTTCCCTAAAGT+AGG	-	Chr5:32073521-32073540	None:intergenic	35.0%
	GCAACTTCAACTTAACTTTG+TGG	+	Chr5:32072785-32072804	MsG0580026191.01.T01:intron	35.0%
	GTTCCAAGTAAACCTACTTT+AGG	+	Chr5:32073506-32073525	MsG0580026191.01.T01:CDS	35.0%
	GTTGCAAATCAAACCAGTTT+AGG	-	Chr5:32072770-32072789	None:intergenic	35.0%
	TGAACAAAGTGATATGTCAC+AGG	+	Chr5:32073019-32073038	MsG0580026191.01.T01:CDS	35.0%
	TTAACACTAGGAAACAAGAG+TGG	+	Chr5:32073647-32073666	MsG0580026191.01.T01:CDS	35.0%
	TTAGGGAAACATTCAAGAGA+TGG	+	Chr5:32073524-32073543	MsG0580026191.01.T01:CDS	35.0%
	TTCCCTAAAGTAGGTTTACT+TGG	-	Chr5:32073512-32073531	None:intergenic	35.0%
	TTGACGATTATGTGAGACAT+CGG	-	Chr5:32073243-32073262	None:intergenic	35.0%
!	GGTTCTTCCGAAAAGTTTTA+TGG	-	Chr5:32072275-32072294	None:intergenic	35.0%
!	TTTTTCCACAACAGTTTCCA+TGG	+	Chr5:32073378-32073397	MsG0580026191.01.T01:CDS	35.0%
!!	AAGTTTCTGTTTCTGATGAG+GGG	-	Chr5:32072974-32072993	None:intergenic	35.0%
!!	AGAAGTTTCTGTTTCTGATG+AGG	-	Chr5:32072976-32072995	None:intergenic	35.0%
!!	ATTGGCTTTCAATACTGATG+AGG	-	Chr5:32073735-32073754	None:intergenic	35.0%
!!	GAAGTTTCTGTTTCTGATGA+GGG	-	Chr5:32072975-32072994	None:intergenic	35.0%
!!	TCATAATCAAGTACTGAGGT+AGG	-	Chr5:32072876-32072895	None:intergenic	35.0%
	AAATCTTGATGAGCAAGAGG+AGG	-	Chr5:32072343-32072362	None:intergenic	40.0%
	AATAAGGCTTGAAGATGTGG+TGG	-	Chr5:32072937-32072956	None:intergenic	40.0%
	AGACCCTAATGAAGATGCAA+AGG	+	Chr5:32073613-32073632	MsG0580026191.01.T01:CDS	40.0%
	ATAAGGCTTGAAGATGTGGT+GGG	-	Chr5:32072936-32072955	None:intergenic	40.0%
	ATGAGTAGTGTCTTGACCTT+TGG	+	Chr5:32073263-32073282	MsG0580026191.01.T01:CDS	40.0%
	CCCAATATAGCATACTATGG+TGG	+	Chr5:32073434-32073453	MsG0580026191.01.T01:CDS	40.0%
	CTCAATAAGGCTTGAAGATG+TGG	-	Chr5:32072940-32072959	None:intergenic	40.0%
	GACACAGGATAACACATTGT+TGG	-	Chr5:32073407-32073426	None:intergenic	40.0%
	GACCCTAATGAAGATGCAAA+GGG	+	Chr5:32073614-32073633	MsG0580026191.01.T01:CDS	40.0%
	GAGAAATCTTGATGAGCAAG+AGG	-	Chr5:32072346-32072365	None:intergenic	40.0%
	TAACACATTGTTGGGTTCCA+TGG	-	Chr5:32073398-32073417	None:intergenic	40.0%
!	AATGGATTTGCATCTATGGG+TGG	+	Chr5:32073683-32073702	MsG0580026191.01.T01:CDS	40.0%
!	ACACAAGATTGAGTTGCGAT+AGG	-	Chr5:32073488-32073507	None:intergenic	40.0%
!	GGTGCTGTGTGTTTGAAAAA+TGG	-	Chr5:32072296-32072315	None:intergenic	40.0%
!	GTGTCTATGCTTTTGCATCT+TGG	-	Chr5:32073074-32073093	None:intergenic	40.0%
!	TTTCTGATGAGGGGGTTTTA+GGG	-	Chr5:32072965-32072984	None:intergenic	40.0%
!!	AGTTTCTGTTTCTGATGAGG+GGG	-	Chr5:32072973-32072992	None:intergenic	40.0%
!!	ATATTGGGTTGGAATGACAC+AGG	-	Chr5:32073422-32073441	None:intergenic	40.0%
!!!	ATCCTCTGTGGTTTGTTTTG+AGG	-	Chr5:32072904-32072923	None:intergenic	40.0%
!!!	GGGTTTTAGGGTTCTCAATA+AGG	-	Chr5:32072953-32072972	None:intergenic	40.0%
	AAGAGGAGGAGAAAACTCTG+CGG	-	Chr5:32072329-32072348	None:intergenic	45.0%
	ACACTAGGAAACAAGAGTGG+TGG	+	Chr5:32073650-32073669	MsG0580026191.01.T01:CDS	45.0%
	ACCTACAAGCATACTTCTCG+TGG	-	Chr5:32073183-32073202	None:intergenic	45.0%
	AGCCTCAAAACAAACCACAG+AGG	+	Chr5:32072899-32072918	MsG0580026191.01.T01:CDS	45.0%
	ATAGGTTGTACGCTCCATGA+TGG	-	Chr5:32073470-32073489	None:intergenic	45.0%
	CCTTGATAAAGCTGCAGGAT+TGG	-	Chr5:32073753-32073772	None:intergenic	45.0%
	GCAAAAGCTGCCAGAGATAT+TGG	+	Chr5:32073144-32073163	MsG0580026191.01.T01:CDS	45.0%
	GTGGTTGTTTAGTCCCATCA+TGG	+	Chr5:32073453-32073472	MsG0580026191.01.T01:CDS	45.0%
	TAGGTTGTACGCTCCATGAT+GGG	-	Chr5:32073469-32073488	None:intergenic	45.0%
	TGAGACCTTGATAAAGCTGC+AGG	-	Chr5:32073758-32073777	None:intergenic	45.0%
	TGCCAGAGATATTGGACTTC+CGG	+	Chr5:32073152-32073171	MsG0580026191.01.T01:CDS	45.0%
	TTGCATCTATGGGTGGTGAT+AGG	+	Chr5:32073690-32073709	MsG0580026191.01.T01:CDS	45.0%
!	ACCACGAGAAGTATGCTTGT+AGG	+	Chr5:32073179-32073198	MsG0580026191.01.T01:CDS	45.0%
!	AGAAGTATGCTTGTAGGTGC+AGG	+	Chr5:32073185-32073204	MsG0580026191.01.T01:CDS	45.0%
!	CCAATCCTGCAGCTTTATCA+AGG	+	Chr5:32073750-32073769	MsG0580026191.01.T01:CDS	45.0%
!	GTTTCTGATGAGGGGGTTTT+AGG	-	Chr5:32072966-32072985	None:intergenic	45.0%
!!	AGTGGTGGAGGACTTTTCAA+TGG	+	Chr5:32073665-32073684	MsG0580026191.01.T01:CDS	45.0%
!!	GGGAGTGTTTAAATCCTCTG+TGG	-	Chr5:32072916-32072935	None:intergenic	45.0%
	CAGAGATATTGGACTTCCGG+AGG	+	Chr5:32073155-32073174	MsG0580026191.01.T01:CDS	50.0%
	CATACTTCTCGTGGTTCCTC+CGG	-	Chr5:32073174-32073193	None:intergenic	50.0%
	CTAGGAAACAAGAGTGGTGG+AGG	+	Chr5:32073653-32073672	MsG0580026191.01.T01:CDS	50.0%
	CTCCGGAAGTCCAATATCTC+TGG	-	Chr5:32073157-32073176	None:intergenic	50.0%
	GGGTGGTGATAGGAATCATG+TGG	+	Chr5:32073700-32073719	MsG0580026191.01.T01:CDS	50.0%
	GGGTTCCATGGAAACTGTTG+TGG	-	Chr5:32073386-32073405	None:intergenic	50.0%
	GGTCTCATGTGTTCCATGAG+AGG	+	Chr5:32073771-32073790	MsG0580026191.01.T01:CDS	50.0%
!	CAGCTTTTGCAGAAGTGACG+GGG	-	Chr5:32073134-32073153	None:intergenic	50.0%
!	GCAGCTTTTGCAGAAGTGAC+GGG	-	Chr5:32073135-32073154	None:intergenic	50.0%
!	GGCAGCTTTTGCAGAAGTGA+CGG	-	Chr5:32073136-32073155	None:intergenic	50.0%
!!	TTTTGCAGAAGTGACGGGGC+TGG	-	Chr5:32073130-32073149	None:intergenic	55.0%
!	GCAGAAGTGACGGGGCTGGT+TGG	-	Chr5:32073126-32073145	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	32072256	32073799	32072256	ID=MsG0580026191.01;Name=MsG0580026191.01
Chr5	mRNA	32072256	32073799	32072256	ID=MsG0580026191.01.T01;Parent=MsG0580026191.01;Name=MsG0580026191.01.T01;_AED=0.35;_eAED=0.35;_QI=0\|0\|0\|1\|1\|1\|2\|0\|379
Chr5	exon	32072256	32072450	32072256	ID=MsG0580026191.01.T01:exon:13273;Parent=MsG0580026191.01.T01
Chr5	exon	32072855	32073799	32072855	ID=MsG0580026191.01.T01:exon:13274;Parent=MsG0580026191.01.T01
Chr5	CDS	32072256	32072450	32072256	ID=MsG0580026191.01.T01:cds;Parent=MsG0580026191.01.T01
Chr5	CDS	32072855	32073799	32072855	ID=MsG0580026191.01.T01:cds;Parent=MsG0580026191.01.T01

Gene Sequence

>MsG0580026191.01.T01

ATGACTAATGATTCAACCATAAAACTTTTCGGAAGAACCATTTTTCAAACACACAGCACCGATGATTATTCCGCAGAGTTTTCTCCTCCTCTTGCTCATCAAGATTTCTCTGATCACAGTCTTCATTCATCTTTATCTTCATCTTCTCCACTTGAAGTGAATTCTTCAAACCAACATGATTCAAAGAGATATAAGGAACAATCAAGGAAAGAACCTACCTCAGTACTTGATTATGAAGAAGCCTCAAAACAAACCACAGAGGATTTAAACACTCCCACCACATCTTCAAGCCTTATTGAGAACCCTAAAACCCCCTCATCAGAAACAGAAACTTCTCAACAGAATTCCACTAAAATTGATGAACAAAGTGATATGTCACAGGACAAAGCTCCTAACAAAATTGTTTCATGTCCAAGATGCAAAAGCATAGACACAAAATTTTGTTACTACAATAATTACAACGCCAACCAGCCCCGTCACTTCTGCAAAAGCTGCCAGAGATATTGGACTTCCGGAGGAACCACGAGAAGTATGCTTGTAGGTGCAGGTCGCCGTAAGAATAAAATCTCTTCTTTTTCTTCCGATGTCTCACATAATCGTCAAATGAGTAGTGTCTTGACCTTTGGATCAGATTCTCCTATTATGTCTTCATCTTCACTTGTCAAGAAAATCAATATTGGATCAAATGATGAAACATCTGATAAGAGTAATCAGTGTTTTTTTCCACAACAGTTTCCATGGAACCCAACAATGTGTTATCCTGTGTCATTCCAACCCAATATAGCATACTATGGTGGTTGTTTAGTCCCATCATGGAGCGTACAACCTATCGCAACTCAATCTTGTGTTCCAAGTAAACCTACTTTAGGGAAACATTCAAGAGATGGCTTAGAAAATAACAACAAAGAAAGTGATAATAATAGTGTGTTGATTCCTAAGAAATTGAGAATTGAAGACCCTAATGAAGATGCAAAGGGTTTTAATTGGTTAACACTAGGAAACAAGAGTGGTGGAGGACTTTTCAATGGATTTGCATCTATGGGTGGTGATAGGAATCATGTGGTTGAAGCAGCCTCATCAGTATTGAAAGCCAATCCTGCAGCTTTATCAAGGTCTCATGTGTTCCATGAGAGGATTTGA

Protein sequence

>MsG0580026191.01.T01

MTNDSTIKLFGRTIFQTHSTDDYSAEFSPPLAHQDFSDHSLHSSLSSSSPLEVNSSNQHDSKRYKEQSRKEPTSVLDYEEASKQTTEDLNTPTTSSSLIENPKTPSSETETSQQNSTKIDEQSDMSQDKAPNKIVSCPRCKSIDTKFCYYNNYNANQPRHFCKSCQRYWTSGGTTRSMLVGAGRRKNKISSFSSDVSHNRQMSSVLTFGSDSPIMSSSSLVKKINIGSNDETSDKSNQCFFPQQFPWNPTMCYPVSFQPNIAYYGGCLVPSWSVQPIATQSCVPSKPTLGKHSRDGLENNNKESDNNSVLIPKKLRIEDPNEDAKGFNWLTLGNKSGGGLFNGFASMGGDRNHVVEAASSVLKANPAALSRSHVFHERI*