AlfalfaGEDB | MsG0380013116.01

M. sativa cultivar ZhongmuNo.1 / MsG0380013116.01

KEGG: -
GO: GO:0003677 GO:0006355
PFAM: PF02701

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013116.01.T01	ACJ85660.1	91.471	469	35	3	1	468	1	465	0	851

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013116.01.T01	Q8LFV3	45.984	498	184	19	1	466	2	446	1.22E-106	327

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013116.01.T01	B7FLM6	91.471	469	35	3	1	468	1	465	0.0	851

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180002232.01	MsG0380013116.01	0.875258	3.549583e-68	1.646743e-64
MsG0180003624.01	MsG0380013116.01	0.867738	1.096663e-65	3.869667e-62
MsG0280011113.01	MsG0380013116.01	0.885241	9.635926e-72	6.563764e-68
MsG0380013116.01	MsG0380013368.01	0.805453	1.325283e-49	7.014232e-47
MsG0380013116.01	MsG0380016021.01	0.817507	3.181311e-52	2.321257e-49
MsG0380013116.01	MsG0480018239.01	0.836391	9.620667e-57	1.210704e-53
MsG0380013116.01	MsG0480021266.01	0.838441	2.871189e-57	3.846055e-54
MsG0380013116.01	MsG0580025052.01	0.824776	6.721412e-54	6.012299e-51
MsG0380013116.01	MsG0580026191.01	0.832663	8.311008e-56	9.352404e-53
MsG0380013116.01	MsG0680034837.01	0.877287	7.090491e-69	3.546171e-65
MsG0380013116.01	MsG0780036754.01	0.864668	1.030673e-64	3.262466e-61
MsG0380013116.01	MsG0780036755.01	0.861967	7.067913e-64	2.035906e-60
MsG0380013116.01	MsG0780036756.01	0.827836	1.255409e-54	1.226023e-51
MsG0380013116.01	MsG0780041812.01	0.864690	1.013969e-64	3.212059e-61
MsG0380013116.01	MsG0880042893.01	0.824269	8.843839e-54	7.795355e-51
MsG0380013116.01	MsG0880043763.01	0.909271	6.848098e-82	1.322029e-77

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013116.01.T01	MTR_3g435480	89.339	469	45	3	1	468	1	465	0.0	844
MsG0380013116.01.T01	MTR_4g082060	42.240	509	205	20	1	466	1	463	2.87e-101	311
MsG0380013116.01.T01	MTR_6g012450	42.278	518	226	19	1	468	1	495	2.66e-100	309
MsG0380013116.01.T01	MTR_7g010950	41.288	528	208	17	1	468	1	486	2.71e-99	306
MsG0380013116.01.T01	MTR_5g041400	39.782	367	115	14	111	466	90	361	3.11e-59	199
MsG0380013116.01.T01	MTR_8g044220	34.151	489	235	19	5	467	11	438	3.23e-59	201
MsG0380013116.01.T01	MTR_5g041380	33.124	477	198	16	3	466	1	369	3.31e-58	196
MsG0380013116.01.T01	MTR_7g086780	34.726	383	189	11	71	422	36	388	5.14e-51	179
MsG0380013116.01.T01	MTR_5g041420	40.196	204	111	4	9	204	7	207	2.98e-38	142
MsG0380013116.01.T01	MTR_6g027460	37.719	228	98	7	129	344	85	280	3.12e-37	140
MsG0380013116.01.T01	MTR_6g027450	37.405	262	125	10	129	361	78	329	5.89e-36	135
MsG0380013116.01.T01	MTR_5g041530	45.890	146	75	2	62	205	62	205	1.18e-33	130
MsG0380013116.01.T01	MTR_5g041530	47.619	147	47	6	331	466	252	379	4.79e-24	103
MsG0380013116.01.T01	MTR_2g016030	78.333	60	13	0	134	193	41	100	7.14e-31	117
MsG0380013116.01.T01	MTR_8g079060	56.322	87	34	2	140	226	29	111	5.10e-28	111
MsG0380013116.01.T01	MTR_3g091820	60.000	75	30	0	119	193	22	96	1.37e-26	109
MsG0380013116.01.T01	MTR_2g093220	72.881	59	16	0	135	193	35	93	5.14e-26	107
MsG0380013116.01.T01	MTR_8g027295	69.492	59	18	0	135	193	19	77	6.69e-26	106
MsG0380013116.01.T01	MTR_1g077600	49.515	103	46	3	142	244	45	141	1.43e-24	103
MsG0380013116.01.T01	MTR_1g077600	49.515	103	46	3	142	244	45	141	1.73e-24	103
MsG0380013116.01.T01	MTR_8g479350	67.797	59	19	0	140	198	68	126	3.34e-24	103
MsG0380013116.01.T01	MTR_4g088580	76.923	52	12	0	142	193	57	108	3.88e-24	103
MsG0380013116.01.T01	MTR_4g022370	59.091	66	27	0	128	193	70	135	5.54e-24	103
MsG0380013116.01.T01	MTR_4g461080	67.692	65	20	1	129	192	17	81	5.76e-24	101
MsG0380013116.01.T01	MTR_1g056810	66.129	62	20	1	142	202	14	75	6.41e-24	101
MsG0380013116.01.T01	MTR_3g090430	73.077	52	14	0	142	193	53	104	9.45e-24	102
MsG0380013116.01.T01	MTR_3g077750	66.129	62	20	1	130	190	50	111	1.33e-23	101
MsG0380013116.01.T01	MTR_2g096740	70.370	54	16	0	140	193	62	115	1.89e-23	100
MsG0380013116.01.T01	MTR_2g096740	70.370	54	16	0	140	193	77	130	2.15e-23	100
MsG0380013116.01.T01	MTR_4g063780	59.722	72	28	1	128	198	63	134	2.98e-23	100
MsG0380013116.01.T01	MTR_2g059540	75.510	49	12	0	140	188	31	79	5.39e-23	97.1
MsG0380013116.01.T01	MTR_8g015840	64.516	62	22	0	140	201	20	81	7.17e-23	97.1
MsG0380013116.01.T01	MTR_4g089095	68.519	54	17	0	140	193	50	103	1.12e-22	98.2
MsG0380013116.01.T01	MTR_2g014170	75.510	49	12	0	140	188	45	93	1.28e-22	98.6
MsG0380013116.01.T01	MTR_8g068210	49.412	85	37	1	109	193	7	85	1.33e-22	99.0
MsG0380013116.01.T01	MTR_4g089095	68.519	54	17	0	140	193	16	69	1.69e-22	97.1
MsG0380013116.01.T01	MTR_2g013370	75.000	52	12	1	142	193	48	98	2.68e-22	96.7
MsG0380013116.01.T01	MTR_2g014060	72.000	50	14	0	142	191	27	76	2.79e-22	97.8
MsG0380013116.01.T01	MTR_4g109980	67.925	53	17	0	138	190	38	90	3.67e-22	97.4
MsG0380013116.01.T01	MTR_7g059400	57.576	66	28	0	128	193	64	129	3.86e-22	97.8
MsG0380013116.01.T01	MTR_7g024670	72.549	51	14	0	142	192	79	129	4.27e-22	97.8
MsG0380013116.01.T01	MTR_5g031440	63.636	55	20	0	136	190	39	93	1.11e-21	96.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013116.01.T01	AT3G47500	45.984	498	184	19	1	466	2	446	1.24e-107	327
MsG0380013116.01.T01	AT5G62430	44.149	376	113	12	97	466	12	296	6.82e-83	258
MsG0380013116.01.T01	AT5G39660	40.000	500	218	21	6	468	3	457	1.31e-82	263
MsG0380013116.01.T01	AT5G39660	40.000	500	218	21	6	468	3	457	1.31e-82	263
MsG0380013116.01.T01	AT5G39660	40.000	500	218	21	6	468	3	457	1.31e-82	263
MsG0380013116.01.T01	AT1G69570	39.542	349	120	15	133	467	125	396	3.41e-54	186
MsG0380013116.01.T01	AT1G26790	33.152	368	161	15	109	466	78	370	6.11e-44	159
MsG0380013116.01.T01	AT2G34140	56.989	93	40	0	101	193	19	111	4.99e-33	123
MsG0380013116.01.T01	AT1G29160	80.000	60	12	0	134	193	56	115	1.97e-32	122
MsG0380013116.01.T01	AT5G60200	64.706	68	24	0	136	203	51	118	4.16e-27	109
MsG0380013116.01.T01	AT3G61850	65.079	63	22	0	135	197	57	119	2.53e-25	105
MsG0380013116.01.T01	AT3G61850	65.079	63	22	0	135	197	57	119	2.53e-25	105
MsG0380013116.01.T01	AT3G61850	65.079	63	22	0	135	197	69	131	2.59e-25	105
MsG0380013116.01.T01	AT3G50410	71.930	57	16	0	140	196	30	86	2.77e-25	104
MsG0380013116.01.T01	AT2G28510	71.186	59	17	0	142	200	50	108	2.93e-25	105
MsG0380013116.01.T01	AT4G24060	62.121	66	25	0	128	193	41	106	3.37e-25	106
MsG0380013116.01.T01	AT3G61850	65.079	63	22	0	135	197	57	119	3.73e-25	105
MsG0380013116.01.T01	AT3G61850	65.079	63	22	0	135	197	69	131	3.99e-25	105
MsG0380013116.01.T01	AT3G45610	61.905	63	24	0	136	198	36	98	5.14e-25	103
MsG0380013116.01.T01	AT2G28810	65.574	61	21	0	131	191	68	128	1.47e-24	104
MsG0380013116.01.T01	AT2G28810	65.574	61	21	0	131	191	85	145	2.12e-24	104
MsG0380013116.01.T01	AT1G51700	57.333	75	28	1	140	210	33	107	2.31e-24	100
MsG0380013116.01.T01	AT1G28310	74.074	54	14	0	140	193	27	80	2.98e-24	103
MsG0380013116.01.T01	AT1G28310	74.074	54	14	0	140	193	51	104	5.38e-24	102
MsG0380013116.01.T01	AT5G60850	62.121	66	25	0	128	193	39	104	7.96e-24	102
MsG0380013116.01.T01	AT4G00940	67.797	59	19	0	135	193	63	121	8.75e-24	101
MsG0380013116.01.T01	AT4G00940	67.797	59	19	0	135	193	63	121	8.75e-24	101
MsG0380013116.01.T01	AT4G00940	67.797	59	19	0	135	193	63	121	8.75e-24	101
MsG0380013116.01.T01	AT3G21270	73.585	53	14	0	140	192	29	81	9.76e-24	99.0
MsG0380013116.01.T01	AT1G21340	62.295	61	22	1	142	201	40	100	1.02e-23	100
MsG0380013116.01.T01	AT3G55370	55.714	70	31	0	136	205	72	141	1.11e-23	102
MsG0380013116.01.T01	AT3G55370	55.714	70	31	0	136	205	72	141	1.12e-23	101
MsG0380013116.01.T01	AT1G47655	77.551	49	11	0	140	188	29	77	1.25e-23	99.0
MsG0380013116.01.T01	AT1G07640	71.698	53	15	0	140	192	21	73	1.39e-23	100
MsG0380013116.01.T01	AT2G37590	57.576	66	28	0	128	193	77	142	1.48e-23	101
MsG0380013116.01.T01	AT1G07640	71.698	53	15	0	140	192	77	129	1.60e-23	101
MsG0380013116.01.T01	AT3G55370	62.903	62	23	0	136	197	117	178	1.64e-23	102
MsG0380013116.01.T01	AT1G07640	71.698	53	15	0	140	192	85	137	2.02e-23	101
MsG0380013116.01.T01	AT3G52440	68.421	57	18	0	142	198	27	83	2.07e-23	99.4
MsG0380013116.01.T01	AT5G66940	48.315	89	43	1	114	199	3	91	2.33e-23	98.6
MsG0380013116.01.T01	AT3G52440	68.421	57	18	0	142	198	46	102	2.40e-23	99.8
MsG0380013116.01.T01	AT1G64620	63.934	61	22	0	128	188	37	97	2.67e-23	101
MsG0380013116.01.T01	AT2G46590	69.811	53	16	0	135	187	63	115	4.07e-23	100
MsG0380013116.01.T01	AT2G46590	69.811	53	16	0	135	187	75	127	4.61e-23	100
MsG0380013116.01.T01	AT5G65590	70.370	54	16	0	140	193	41	94	5.32e-23	99.8
MsG0380013116.01.T01	AT5G02460	59.091	66	27	0	128	193	83	148	1.31e-22	99.8
MsG0380013116.01.T01	AT5G62940	73.469	49	13	0	142	190	75	123	1.51e-21	96.3
MsG0380013116.01.T01	AT4G21050	57.971	69	29	0	125	193	9	77	1.75e-21	92.8
MsG0380013116.01.T01	AT4G38000	64.286	56	19	1	139	194	40	94	5.03e-21	92.4
MsG0380013116.01.T01	AT4G21040	63.462	52	19	0	142	193	27	78	1.24e-18	85.5
MsG0380013116.01.T01	AT4G21080	61.538	52	20	0	142	193	27	78	7.28e-18	83.6
MsG0380013116.01.T01	AT4G21030	59.091	44	18	0	142	185	23	66	1.04e-11	64.3

Find 120 sgRNAs with CRISPR-Local

Find 202 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GACCCTGAAATTAAGCTCTT+TGG	0.245711	3:-30697562	MsG0380013116.01.T01:CDS
ACACATCCATTTCTTTGTTT+TGG	0.252620	3:+30694920	None:intergenic
TGTTACAGTTTCAAAATCTA+TGG	0.265972	3:-30695266	MsG0380013116.01.T01:CDS
GCAAGGCGTGTCAAAGATAT+TGG	0.279470	3:-30695585	MsG0380013116.01.T01:CDS
ACAAAGAAATGGATGTGTTT+TGG	0.286668	3:-30694915	MsG0380013116.01.T01:CDS
TCAGCACCTTTATCTGCTTC+AGG	0.287149	3:+30695892	None:intergenic
GAGTAGAGGTGGTATGATTA+AGG	0.290225	3:-30694807	MsG0380013116.01.T01:CDS
TTCCCAAAGAGCTTAATTTC+AGG	0.291841	3:+30697559	None:intergenic
AAGCTGCAAAGAGTTCAATT+TGG	0.294104	3:-30694859	MsG0380013116.01.T01:CDS
GAACTCTTTGCAGCTTCATT+TGG	0.306321	3:+30694866	None:intergenic
TCTCAATCCTGCGGAGAAAA+AGG	0.308287	3:-30695338	MsG0380013116.01.T01:CDS
CTCACCAATGTGCATTTGAT+TGG	0.310026	3:-30694600	MsG0380013116.01.T01:three_prime_UTR
TTCCCAAGCGTTGGAGATTT+CGG	0.313791	3:+30695010	None:intergenic
ACCCTGAAATTAAGCTCTTT+GGG	0.333537	3:-30697561	MsG0380013116.01.T01:CDS
TTCTCAAACACAATACAAAA+AGG	0.333946	3:+30694665	None:intergenic
GCAAGAATTGTTTCTCCTAA+TGG	0.336437	3:-30695451	MsG0380013116.01.T01:CDS
CGCGAGACAGTTATTAGTTA+AGG	0.358255	3:+30697660	None:intergenic
TTTGTTTCGTTGTGTATGTT+TGG	0.359602	3:-30697614	MsG0380013116.01.T01:five_prime_UTR
GTGCTCCTTGGCCTTATACT+TGG	0.364975	3:-30695162	MsG0380013116.01.T01:CDS
AGCTGCAAAGAGTTCAATTT+GGG	0.368742	3:-30694858	MsG0380013116.01.T01:CDS
TGGCCTTATACTTGGAGTTC+CGG	0.375656	3:-30695154	MsG0380013116.01.T01:CDS
TCATTGCCACAGCAAAATAA+TGG	0.377056	3:-30695214	MsG0380013116.01.T01:CDS
TGAAGATGATGAGTACCATT+AGG	0.379458	3:+30695436	None:intergenic
GTGCCGGAACTCCAAGTATA+AGG	0.381122	3:+30695151	None:intergenic
GTGATTCTTCTGTTTGCAAA+TGG	0.382048	3:+30694942	None:intergenic
TTCTTGATCTCTGCGGCATC+TGG	0.383443	3:+30695844	None:intergenic
AATGGTAGAGTCCTCAGCTT+TGG	0.387317	3:-30695400	MsG0380013116.01.T01:CDS
CTTAACGACACTCAAAATAA+TGG	0.393910	3:-30695313	MsG0380013116.01.T01:CDS
TCTTGAGCGTTGTTGTTGTT+TGG	0.409763	3:+30695718	None:intergenic
AACCAAGGAACATTCCAAAA+AGG	0.412700	3:+30695070	None:intergenic
GCGCTGTTGCAGCGTGGACA+CGG	0.414640	3:+30695664	None:intergenic
AGAAATGTTCCGGTCGGTGC+AGG	0.415448	3:-30695544	MsG0380013116.01.T01:CDS
TCAAACCTCTCCAATGTTGA+TGG	0.423970	3:-30694750	MsG0380013116.01.T01:CDS
TAGGATCCTGAAGCAGATAA+AGG	0.426187	3:-30695898	MsG0380013116.01.T01:CDS
ATGGTAGAGTCCTCAGCTTT+GGG	0.430451	3:-30695399	MsG0380013116.01.T01:CDS
GAATCACCAAAACAAAGAAA+TGG	0.432133	3:-30694926	MsG0380013116.01.T01:CDS
TCCCAAAGAGCTTAATTTCA+GGG	0.435590	3:+30697560	None:intergenic
CATGTATGACTAGTGCTCCT+TGG	0.447113	3:-30695174	MsG0380013116.01.T01:CDS
ATCTCTGCGGCATCTGGTGG+TGG	0.451186	3:+30695850	None:intergenic
AGAAAGATGGTCACTGTCCC+AGG	0.451739	3:+30694621	None:intergenic
TGTTTCGCCGGTGGCGGCGA+TGG	0.453817	3:-30697482	MsG0380013116.01.T01:CDS
CGGAACCATGAGAAATGTTC+CGG	0.463308	3:-30695554	MsG0380013116.01.T01:CDS
ACACTTGGAATTAAGAATGA+AGG	0.464706	3:-30694833	MsG0380013116.01.T01:CDS
TGTATTGTGTTTGAGAATTG+AGG	0.475993	3:-30694659	MsG0380013116.01.T01:three_prime_UTR
GGAGATTTCGGACTAGACTT+TGG	0.480630	3:+30695022	None:intergenic
GGTAGTCTCAACACAAGAAA+GGG	0.480669	3:-30694560	MsG0380013116.01.T01:three_prime_UTR
AGTGATCTAGCTAAAGCTGC+AGG	0.482293	3:+30694722	None:intergenic
CCACAAACTTTGTGTCCTCC+AGG	0.482373	3:-30695118	MsG0380013116.01.T01:CDS
GTCCGAAATCTCCAACGCTT+GGG	0.485579	3:-30695012	MsG0380013116.01.T01:CDS
AGTCCGAAATCTCCAACGCT+TGG	0.486148	3:-30695013	MsG0380013116.01.T01:CDS
AACAATTCAGCAGCAACATT+GGG	0.489579	3:-30695814	MsG0380013116.01.T01:CDS
CTCGAGTGTTTCCCAAGCGT+TGG	0.495617	3:+30695001	None:intergenic
TAAAATGACATGGGAAATCC+TGG	0.496063	3:+30695100	None:intergenic
CCTGGAGGACACAAAGTTTG+TGG	0.502884	3:+30695118	None:intergenic
GGAAAATGTTTCGCCGGTGG+CGG	0.507124	3:-30697488	MsG0380013116.01.T01:CDS
TTTCTTCTCCCTGCACCGAC+CGG	0.507717	3:+30695535	None:intergenic
AGTTCAATTTGGGAAACACT+TGG	0.509045	3:-30694848	MsG0380013116.01.T01:CDS
TTGATTGGACTTGTTGACCT+TGG	0.511589	3:-30694585	MsG0380013116.01.T01:three_prime_UTR
GGTGAAGCTCTTATCACTGC+TGG	0.511617	3:-30697514	MsG0380013116.01.T01:CDS
TAGAGTCCTCAGCTTTGGGT+TGG	0.513593	3:-30695395	MsG0380013116.01.T01:CDS
CGCTGTTGCAGCGTGGACAC+GGG	0.514091	3:+30695665	None:intergenic
TGTCAAAGATATTGGACTGC+AGG	0.515747	3:-30695577	MsG0380013116.01.T01:CDS
GGACACGGGAGTAATTTGTC+TGG	0.517983	3:+30695679	None:intergenic
CAACAATTCAGCAGCAACAT+TGG	0.525068	3:-30695815	MsG0380013116.01.T01:CDS
CTTCAAAATTTGAAAACCAA+TGG	0.530626	3:-30695418	MsG0380013116.01.T01:CDS
TGGTAGTCTCAACACAAGAA+AGG	0.531549	3:-30694561	MsG0380013116.01.T01:three_prime_UTR
TCTACATCCATCGCCGCCAC+CGG	0.533306	3:+30697475	None:intergenic
AAGAATGAAGGTTTGAGTAG+AGG	0.533493	3:-30694821	MsG0380013116.01.T01:CDS
TTGTGGCGAGGGAATTGTGC+CGG	0.535590	3:+30695135	None:intergenic
GAAGTTTCTTCATCTATGGA+AGG	0.537934	3:+30695772	None:intergenic
CTAGACTTTGGAGTTGTCGC+GGG	0.546673	3:+30695034	None:intergenic
AAAGCTGAGGACTCTACCAT+TGG	0.551075	3:+30695402	None:intergenic
GGACACAAAGTTTGTGGCGA+GGG	0.554181	3:+30695124	None:intergenic
TTGGACTTGTTGACCTTGGT+TGG	0.558722	3:-30694581	MsG0380013116.01.T01:three_prime_UTR
ATGCACATTGGTGAGAAAGA+TGG	0.558817	3:+30694608	None:intergenic
GACACTCAAAATAATGGTGA+TGG	0.566196	3:-30695307	MsG0380013116.01.T01:CDS
TTGATCTCTGCGGCATCTGG+TGG	0.568473	3:+30695847	None:intergenic
AATGAAGGTTTGAGTAGAGG+TGG	0.570030	3:-30694818	MsG0380013116.01.T01:CDS
CAACGCTTGGGAAACACTCG+AGG	0.576028	3:-30695000	MsG0380013116.01.T01:CDS
GAACTCCAAGTATAAGGCCA+AGG	0.577392	3:+30695157	None:intergenic
TCAAAATCTATGGAGGAAAG+TGG	0.579037	3:-30695256	MsG0380013116.01.T01:CDS
CAAGGAGCACTAGTCATACA+TGG	0.583891	3:+30695175	None:intergenic
GCAGGGTTAGCCATCAACAT+TGG	0.587131	3:+30694740	None:intergenic
GACAATGAATCATAGATATG+TGG	0.589586	3:+30695367	None:intergenic
GTTGTCGCGGGAGTATGAGC+GGG	0.592077	3:+30695046	None:intergenic
CTAAACATGAACATCACAAG+AGG	0.593459	3:-30694305	MsG0380013116.01.T01:three_prime_UTR
AGGAGCAGGGTAAAATGACA+TGG	0.595195	3:+30695090	None:intergenic
TACAGTTTCAAAATCTATGG+AGG	0.596048	3:-30695263	MsG0380013116.01.T01:CDS
ATAAGAGCTTCACCTTCCCC+AGG	0.600696	3:+30697523	None:intergenic
TGAAGAAGAAGAAATCGAGA+AGG	0.603186	3:-30697410	MsG0380013116.01.T01:intron
ACCGACCGGAACATTTCTCA+TGG	0.607090	3:+30695549	None:intergenic
ACTAGACTTTGGAGTTGTCG+CGG	0.607556	3:+30695033	None:intergenic
CAAAGATATTGGACTGCAGG+CGG	0.608252	3:-30695574	MsG0380013116.01.T01:CDS
GAAATGTTCCGGTCGGTGCA+GGG	0.612559	3:-30695543	MsG0380013116.01.T01:CDS
GGAGTATGAGCGGGAAACCA+AGG	0.614213	3:+30695055	None:intergenic
TGAGGAAAATGTTTCGCCGG+TGG	0.625717	3:-30697491	MsG0380013116.01.T01:CDS
TGCATCAAGAGCCTCAGAGA+TGG	0.626336	3:+30695474	None:intergenic
GTTAGCCATCAACATTGGAG+AGG	0.627108	3:+30694745	None:intergenic
TGGTGAGGAAAATGTTTCGC+CGG	0.632349	3:-30697494	MsG0380013116.01.T01:CDS
AGCTCTTATCACTGCTGGTG+AGG	0.635032	3:-30697509	MsG0380013116.01.T01:CDS
GTGATCTAGCTAAAGCTGCA+GGG	0.636623	3:+30694723	None:intergenic
CTAGTCATACATGGAACTTG+AGG	0.637687	3:+30695184	None:intergenic
AGTTGTCGCGGGAGTATGAG+CGG	0.637692	3:+30695045	None:intergenic
ACATTGGAGAGGTTTGAACA+TGG	0.639471	3:+30694756	None:intergenic
GTCAAATGATCTCAATCCTG+CGG	0.646844	3:-30695347	MsG0380013116.01.T01:CDS
GAAGAATCAATGCATGCTGT+AGG	0.651328	3:-30694343	MsG0380013116.01.T01:three_prime_UTR
ACCATGAGAAATGTTCCGGT+CGG	0.654901	3:-30695550	MsG0380013116.01.T01:CDS
GAGCCTCAGAGATGGTGATG+TGG	0.657067	3:+30695482	None:intergenic
AGGACACAAAGTTTGTGGCG+AGG	0.667462	3:+30695123	None:intergenic
GATGATCCAACCCAAAGCTG+AGG	0.671324	3:+30695389	None:intergenic
AACGCTTGGGAAACACTCGA+GGG	0.675892	3:-30694999	MsG0380013116.01.T01:CDS
GTAGTCTCAACACAAGAAAG+GGG	0.677265	3:-30694559	MsG0380013116.01.T01:three_prime_UTR
GTTGTCGTTCTTGATCTCTG+CGG	0.679992	3:+30695837	None:intergenic
GGAGCAGGGTAAAATGACAT+GGG	0.680900	3:+30695091	None:intergenic
TGTGTTGAGACTACCAACCA+AGG	0.688568	3:+30694568	None:intergenic
AAGTCCAATCAAATGCACAT+TGG	0.697342	3:+30694596	None:intergenic
TCGCCACATCACCATCTCTG+AGG	0.699550	3:-30695485	MsG0380013116.01.T01:CDS
GTGTCCGCGCTGTTGCAGCG+TGG	0.703298	3:+30695658	None:intergenic
AATGACATGGGAAATCCTGG+AGG	0.743399	3:+30695103	None:intergenic
GTGTCCACGCTGCAACAGCG+CGG	0.758797	3:-30695662	MsG0380013116.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATGCTTATTAAATAAAATAA+AGG	+	Chr3:30695817-30695836	None:intergenic	10.0%
!!	TATAGAAAAAATTGTAAAAA+AGG	+	Chr3:30695019-30695038	None:intergenic	10.0%
!!	TGCTTATTAAATAAAATAAA+GGG	+	Chr3:30695816-30695835	None:intergenic	10.0%
!!!	TTTTTACAATTTTTTCTATA+TGG	-	Chr3:30695019-30695038	MsG0380013116.01.T01:CDS	10.0%
!!	AAATTAAATAAATTTGAGCA+TGG	-	Chr3:30694969-30694988	MsG0380013116.01.T01:CDS	15.0%
!!	AATTAAATAAATTTGAGCAT+GGG	-	Chr3:30694970-30694989	MsG0380013116.01.T01:CDS	15.0%
!!	ATAAAAATTAACCAAAACTT+AGG	+	Chr3:30695494-30695513	None:intergenic	15.0%
!!	GCTTATTAAATAAAATAAAG+GGG	+	Chr3:30695815-30695834	None:intergenic	15.0%
!!	TTCTTATGATAAAGAAAAAT+GGG	-	Chr3:30697623-30697642	MsG0380013116.01.T01:five_prime_UTR	15.0%
!!	TTTCTTATGATAAAGAAAAA+TGG	-	Chr3:30697622-30697641	MsG0380013116.01.T01:five_prime_UTR	15.0%
!!!	AAGTTTTGGTTAATTTTTAT+AGG	-	Chr3:30695494-30695513	MsG0380013116.01.T01:CDS	15.0%
!!!	TAAAATAAATACCTAAGTTT+TGG	-	Chr3:30695480-30695499	MsG0380013116.01.T01:CDS	15.0%
!!!	TAGTAGTATTAAGATTTTTA+GGG	-	Chr3:30695090-30695109	MsG0380013116.01.T01:CDS	15.0%
!!!	TTGATTTATTTTTGATGTTT+TGG	-	Chr3:30695316-30695335	MsG0380013116.01.T01:CDS	15.0%
!!!	TTTCAATTTTTATATGAAGT+TGG	-	Chr3:30695272-30695291	MsG0380013116.01.T01:CDS	15.0%
!!	AAACATTGTGTCAAATTAAT+AGG	-	Chr3:30696106-30696125	MsG0380013116.01.T01:intron	20.0%
!!	AATATATATTGCATCAATTG+AGG	+	Chr3:30695667-30695686	None:intergenic	20.0%
!!	AGAAAAAATGATTGTAACTA+AGG	-	Chr3:30694439-30694458	MsG0380013116.01.T01:three_prime_UTR	20.0%
!!	ATATTGTCTCAAATAATTAG+CGG	-	Chr3:30696025-30696044	MsG0380013116.01.T01:intron	20.0%
!!	ATTAAATAAATTTGAGCATG+GGG	-	Chr3:30694971-30694990	MsG0380013116.01.T01:CDS	20.0%
!!	GATTATAAACAAAAAGACTT+AGG	+	Chr3:30695597-30695616	None:intergenic	20.0%
!!	TATATTTAGTAACTCATATG+AGG	+	Chr3:30695730-30695749	None:intergenic	20.0%
!!	TCTTATGATAAAGAAAAATG+GGG	-	Chr3:30697624-30697643	MsG0380013116.01.T01:five_prime_UTR	20.0%
!!	TGTTTGTATGATCTTATTAT+AGG	-	Chr3:30694907-30694926	MsG0380013116.01.T01:CDS	20.0%
!!	TTAAATAAAATAAAGGGGTA+TGG	+	Chr3:30695810-30695829	None:intergenic	20.0%
!!!	ACTAAAGATTTTTATGAGTA+AGG	-	Chr3:30694689-30694708	MsG0380013116.01.T01:exon	20.0%
!!!	ACTACAAAGATTTTCAAAAA+GGG	+	Chr3:30695074-30695093	None:intergenic	20.0%
!!!	ATTTTTATATGAAGTTGGTA+AGG	-	Chr3:30695277-30695296	MsG0380013116.01.T01:CDS	20.0%
!!!	CTTAGGTATTTATTTTACAT+AGG	+	Chr3:30695477-30695496	None:intergenic	20.0%
!!!	GTAGTAGTATTAAGATTTTT+AGG	-	Chr3:30695089-30695108	MsG0380013116.01.T01:CDS	20.0%
!!!	GTTTGTTGTATAGTTTTAAT+CGG	+	Chr3:30695366-30695385	None:intergenic	20.0%
!!!	TACTACAAAGATTTTCAAAA+AGG	+	Chr3:30695075-30695094	None:intergenic	20.0%
!!!	TTCTTATTTAAGAGTTTTCA+TGG	+	Chr3:30697333-30697352	None:intergenic	20.0%
!!!	TTTCAATTTTTACATGAAGT+TGG	-	Chr3:30695237-30695256	MsG0380013116.01.T01:CDS	20.0%
!!!	TTTCTTTGTTTTACATGATT+TGG	-	Chr3:30697648-30697667	MsG0380013116.01.T01:five_prime_UTR	20.0%
!!!	TTTGGTTAATTTTTATAGGA+AGG	-	Chr3:30695498-30695517	MsG0380013116.01.T01:CDS	20.0%
!!!	TTTTGTGTAACACTATAAAT+AGG	-	Chr3:30697503-30697522	MsG0380013116.01.T01:CDS	20.0%
!	ACTGAAAAAGTCAATATGAT+TGG	-	Chr3:30694827-30694846	MsG0380013116.01.T01:CDS	25.0%
!	CTTATGATAAAGAAAAATGG+GGG	-	Chr3:30697625-30697644	MsG0380013116.01.T01:five_prime_UTR	25.0%
!	CTTCAAAATTTGAAAACCAA+TGG	-	Chr3:30696605-30696624	MsG0380013116.01.T01:intron	25.0%
!	GAATTATGTACTTATGATCT+TGG	-	Chr3:30695910-30695929	MsG0380013116.01.T01:intron	25.0%
!	TGTTACAGTTTCAAAATCTA+TGG	-	Chr3:30696757-30696776	MsG0380013116.01.T01:intron	25.0%
!	TTCAGATTTGGAAAAATGTT+TGG	-	Chr3:30695950-30695969	MsG0380013116.01.T01:intron	25.0%
!	TTCTCAAACACAATACAAAA+AGG	+	Chr3:30697361-30697380	None:intergenic	25.0%
!!	CTACAAAGATTTTCAAAAAG+GGG	+	Chr3:30695073-30695092	None:intergenic	25.0%
!!	TCATCAATTCTCAATGTTTT+AGG	+	Chr3:30697136-30697155	None:intergenic	25.0%
!!!	ATAAAACCATTATTTTGCTG+TGG	+	Chr3:30696818-30696837	None:intergenic	25.0%
!!!	ATTTTTACATGAAGTTGGTA+AGG	-	Chr3:30695242-30695261	MsG0380013116.01.T01:CDS	25.0%
!!!	TGTTTTGAAGAAAGATGTTT+CGG	+	Chr3:30694335-30694354	None:intergenic	25.0%
!!!	TTTTGAAGTTTCTTCATCTA+TGG	+	Chr3:30696258-30696277	None:intergenic	25.0%
	ACACTTGGAATTAAGAATGA+AGG	-	Chr3:30697190-30697209	MsG0380013116.01.T01:intron	30.0%
	CACAACGAAACAAAAACAAA+AGG	+	Chr3:30694403-30694422	None:intergenic	30.0%
	CTTAACGACACTCAAAATAA+TGG	-	Chr3:30696710-30696729	MsG0380013116.01.T01:intron	30.0%
	GAATCACCAAAACAAAGAAA+TGG	-	Chr3:30697097-30697116	MsG0380013116.01.T01:intron	30.0%
	GACAATGAATCATAGATATG+TGG	+	Chr3:30696659-30696678	None:intergenic	30.0%
	TACAGTTTCAAAATCTATGG+AGG	-	Chr3:30696760-30696779	MsG0380013116.01.T01:intron	30.0%
	TGTATTGTGTTTGAGAATTG+AGG	-	Chr3:30697364-30697383	MsG0380013116.01.T01:intron	30.0%
	TTAATGATGAACATGAGACA+CGG	+	Chr3:30696076-30696095	None:intergenic	30.0%
	TTTAGTAACTCATATGAGGT+AGG	+	Chr3:30695726-30695745	None:intergenic	30.0%
	TTTGTTTCGTTGTGTATGTT+TGG	-	Chr3:30694409-30694428	MsG0380013116.01.T01:three_prime_UTR	30.0%
!	AACTATTGTATGTGTCACTA+TGG	+	Chr3:30695991-30696010	None:intergenic	30.0%
!	ACAAAGAAATGGATGTGTTT+TGG	-	Chr3:30697108-30697127	MsG0380013116.01.T01:intron	30.0%
!	GAAAAAGATTCTTTTTCCTG+GGG	-	Chr3:30694484-30694503	MsG0380013116.01.T01:three_prime_UTR	30.0%
!	GCTTTTCAATCAAAGAAAGA+TGG	-	Chr3:30697238-30697257	MsG0380013116.01.T01:intron	30.0%
!	GGAAAAAGATTCTTTTTCCT+GGG	-	Chr3:30694483-30694502	MsG0380013116.01.T01:three_prime_UTR	30.0%
!	TGTATCACTTTGTTCGTTTT+CGG	+	Chr3:30696282-30696301	None:intergenic	30.0%
!!	ACACATCCATTTCTTTGTTT+TGG	+	Chr3:30697106-30697125	None:intergenic	30.0%
	AACAATTCAGCAGCAACATT+GGG	-	Chr3:30696209-30696228	MsG0380013116.01.T01:intron	35.0%
	AACCAAGGAACATTCCAAAA+AGG	+	Chr3:30696956-30696975	None:intergenic	35.0%
	AAGAATGAAGGTTTGAGTAG+AGG	-	Chr3:30697202-30697221	MsG0380013116.01.T01:intron	35.0%
	AAGCTGCAAAGAGTTCAATT+TGG	-	Chr3:30697164-30697183	MsG0380013116.01.T01:intron	35.0%
	AAGTCCAATCAAATGCACAT+TGG	+	Chr3:30697430-30697449	None:intergenic	35.0%
	ACACAACAAATAGATACTCG+TGG	+	Chr3:30694805-30694824	None:intergenic	35.0%
	ACCCTGAAATTAAGCTCTTT+GGG	-	Chr3:30694462-30694481	MsG0380013116.01.T01:three_prime_UTR	35.0%
	ACTTATGATCTTGGATATGC+AGG	-	Chr3:30695919-30695938	MsG0380013116.01.T01:intron	35.0%
	AGCTGCAAAGAGTTCAATTT+GGG	-	Chr3:30697165-30697184	MsG0380013116.01.T01:intron	35.0%
	AGTTCAATTTGGGAAACACT+TGG	-	Chr3:30697175-30697194	MsG0380013116.01.T01:intron	35.0%
	ATCGTGCATGTTTGATATCA+CGG	-	Chr3:30694730-30694749	MsG0380013116.01.T01:CDS	35.0%
	CAGGACTAATACTTCAGATT+TGG	-	Chr3:30695938-30695957	MsG0380013116.01.T01:intron	35.0%
	CTAAACATGAACATCACAAG+AGG	-	Chr3:30697718-30697737	MsG0380013116.01.T01:five_prime_UTR	35.0%
	GAAGTTTCTTCATCTATGGA+AGG	+	Chr3:30696254-30696273	None:intergenic	35.0%
	GACACTCAAAATAATGGTGA+TGG	-	Chr3:30696716-30696735	MsG0380013116.01.T01:intron	35.0%
	GTGATTCTTCTGTTTGCAAA+TGG	+	Chr3:30697084-30697103	None:intergenic	35.0%
	TAAAATGACATGGGAAATCC+TGG	+	Chr3:30696926-30696945	None:intergenic	35.0%
	TAAATTTGAGCATGGGGTAA+TGG	-	Chr3:30694977-30694996	MsG0380013116.01.T01:CDS	35.0%
	TCAAAATCTATGGAGGAAAG+TGG	-	Chr3:30696767-30696786	MsG0380013116.01.T01:intron	35.0%
	TCATTGCCACAGCAAAATAA+TGG	-	Chr3:30696809-30696828	MsG0380013116.01.T01:intron	35.0%
	TCCCAAAGAGCTTAATTTCA+GGG	+	Chr3:30694466-30694485	None:intergenic	35.0%
	TGAAGAAGAAGAAATCGAGA+AGG	-	Chr3:30694613-30694632	MsG0380013116.01.T01:three_prime_UTR	35.0%
	TGAAGATGATGAGTACCATT+AGG	+	Chr3:30696590-30696609	None:intergenic	35.0%
	TTCCCAAAGAGCTTAATTTC+AGG	+	Chr3:30694467-30694486	None:intergenic	35.0%
	TTCTACTGTATAGTGCTCAT+AGG	+	Chr3:30695560-30695579	None:intergenic	35.0%
	TTGTCTCAAATAATTAGCGG+CGG	-	Chr3:30696028-30696047	MsG0380013116.01.T01:intron	35.0%
!	GCAAGAATTGTTTCTCCTAA+TGG	-	Chr3:30696572-30696591	MsG0380013116.01.T01:intron	35.0%
!	GGGAAAAAGATTCTTTTTCC+TGG	-	Chr3:30694482-30694501	MsG0380013116.01.T01:three_prime_UTR	35.0%
!!!	AAGATGTTTCGGTTTTTTCG+AGG	+	Chr3:30694324-30694343	None:intergenic	35.0%
!!!	TCATCTATGGAAGGTGTTTT+CGG	+	Chr3:30696245-30696264	None:intergenic	35.0%
	AATGAAGGTTTGAGTAGAGG+TGG	-	Chr3:30697205-30697224	MsG0380013116.01.T01:intron	40.0%
	ACATTGGAGAGGTTTGAACA+TGG	+	Chr3:30697270-30697289	None:intergenic	40.0%
	ACTGTATAGTGCTCATAGGA+AGG	+	Chr3:30695556-30695575	None:intergenic	40.0%
	ATGCACATTGGTGAGAAAGA+TGG	+	Chr3:30697418-30697437	None:intergenic	40.0%
	CAACAATTCAGCAGCAACAT+TGG	-	Chr3:30696208-30696227	MsG0380013116.01.T01:intron	40.0%
	CGCGAGACAGTTATTAGTTA+AGG	+	Chr3:30694366-30694385	None:intergenic	40.0%
	CTAGTCATACATGGAACTTG+AGG	+	Chr3:30696842-30696861	None:intergenic	40.0%
	CTCACCAATGTGCATTTGAT+TGG	-	Chr3:30697423-30697442	MsG0380013116.01.T01:CDS	40.0%
	GAACATTCCAAAAAGGAGCA+GGG	+	Chr3:30696949-30696968	None:intergenic	40.0%
	GAACTCTTTGCAGCTTCATT+TGG	+	Chr3:30697160-30697179	None:intergenic	40.0%
	GAAGAATCAATGCATGCTGT+AGG	-	Chr3:30697680-30697699	MsG0380013116.01.T01:five_prime_UTR	40.0%
	GACCCTGAAATTAAGCTCTT+TGG	-	Chr3:30694461-30694480	MsG0380013116.01.T01:three_prime_UTR	40.0%
	GAGTAGAGGTGGTATGATTA+AGG	-	Chr3:30697216-30697235	MsG0380013116.01.T01:intron	40.0%
	GGTAGTCTCAACACAAGAAA+GGG	-	Chr3:30697463-30697482	MsG0380013116.01.T01:CDS	40.0%
	GTAGTCTCAACACAAGAAAG+GGG	-	Chr3:30697464-30697483	MsG0380013116.01.T01:CDS	40.0%
	GTCAAATGATCTCAATCCTG+CGG	-	Chr3:30696676-30696695	MsG0380013116.01.T01:intron	40.0%
	TAGGATCCTGAAGCAGATAA+AGG	-	Chr3:30696125-30696144	MsG0380013116.01.T01:intron	40.0%
	TATAGGAAGGTCTAGTCACT+CGG	-	Chr3:30695511-30695530	MsG0380013116.01.T01:CDS	40.0%
	TCAAACCTCTCCAATGTTGA+TGG	-	Chr3:30697273-30697292	MsG0380013116.01.T01:intron	40.0%
	TGGTAGTCTCAACACAAGAA+AGG	-	Chr3:30697462-30697481	MsG0380013116.01.T01:CDS	40.0%
	TGTCAAAGATATTGGACTGC+AGG	-	Chr3:30696446-30696465	MsG0380013116.01.T01:intron	40.0%
!	AAGATTCTTTTTCCTGGGGA+AGG	-	Chr3:30694488-30694507	MsG0380013116.01.T01:three_prime_UTR	40.0%
!	CATTTTACCCTGCTCCTTTT+TGG	-	Chr3:30696939-30696958	MsG0380013116.01.T01:intron	40.0%
!	TATGTGTCACTATGGTGTCA+AGG	+	Chr3:30695983-30696002	None:intergenic	40.0%
!	TCTTGAGCGTTGTTGTTGTT+TGG	+	Chr3:30696308-30696327	None:intergenic	40.0%
!	TTAAGAACCTTTTTCTCCGC+AGG	+	Chr3:30696695-30696714	None:intergenic	40.0%
!!	TTGATTGGACTTGTTGACCT+TGG	-	Chr3:30697438-30697457	MsG0380013116.01.T01:CDS	40.0%
!!!	AGGTTAGTCACTTTTTCTCC+TGG	-	Chr3:30697384-30697403	MsG0380013116.01.T01:intron	40.0%
!!!	CATCTATGGAAGGTGTTTTC+GGG	+	Chr3:30696244-30696263	None:intergenic	40.0%
!!!	CTCCTTTTTGGAATGTTCCT+TGG	-	Chr3:30696951-30696970	MsG0380013116.01.T01:intron	40.0%
!!!	GGTTAGTCACTTTTTCTCCT+GGG	-	Chr3:30697385-30697404	MsG0380013116.01.T01:intron	40.0%
	AAAGCTGAGGACTCTACCAT+TGG	+	Chr3:30696624-30696643	None:intergenic	45.0%
	AATGACATGGGAAATCCTGG+AGG	+	Chr3:30696923-30696942	None:intergenic	45.0%
	AATGGTAGAGTCCTCAGCTT+TGG	-	Chr3:30696623-30696642	MsG0380013116.01.T01:intron	45.0%
	ACCATGAGAAATGTTCCGGT+CGG	-	Chr3:30696473-30696492	MsG0380013116.01.T01:intron	45.0%
	AGGAGCAGGGTAAAATGACA+TGG	+	Chr3:30696936-30696955	None:intergenic	45.0%
	AGTGATCTAGCTAAAGCTGC+AGG	+	Chr3:30697304-30697323	None:intergenic	45.0%
	ATGGTAGAGTCCTCAGCTTT+GGG	-	Chr3:30696624-30696643	MsG0380013116.01.T01:intron	45.0%
	CAAAGATATTGGACTGCAGG+CGG	-	Chr3:30696449-30696468	MsG0380013116.01.T01:intron	45.0%
	CATGTATGACTAGTGCTCCT+TGG	-	Chr3:30696849-30696868	MsG0380013116.01.T01:intron	45.0%
	CGGAACCATGAGAAATGTTC+CGG	-	Chr3:30696469-30696488	MsG0380013116.01.T01:intron	45.0%
	GAACTCCAAGTATAAGGCCA+AGG	+	Chr3:30696869-30696888	None:intergenic	45.0%
	GCAAGGCGTGTCAAAGATAT+TGG	-	Chr3:30696438-30696457	MsG0380013116.01.T01:intron	45.0%
	GGAACATTCCAAAAAGGAGC+AGG	+	Chr3:30696950-30696969	None:intergenic	45.0%
	GGAGCAGGGTAAAATGACAT+GGG	+	Chr3:30696935-30696954	None:intergenic	45.0%
	GTGATCTAGCTAAAGCTGCA+GGG	+	Chr3:30697303-30697322	None:intergenic	45.0%
	GTTAGCCATCAACATTGGAG+AGG	+	Chr3:30697281-30697300	None:intergenic	45.0%
	GTTGTCGTTCTTGATCTCTG+CGG	+	Chr3:30696189-30696208	None:intergenic	45.0%
	TCAGCACCTTTATCTGCTTC+AGG	+	Chr3:30696134-30696153	None:intergenic	45.0%
	TCTCAATCCTGCGGAGAAAA+AGG	-	Chr3:30696685-30696704	MsG0380013116.01.T01:intron	45.0%
	TGGTGAGGAAAATGTTTCGC+CGG	-	Chr3:30694529-30694548	MsG0380013116.01.T01:three_prime_UTR	45.0%
	TGTGTTGAGACTACCAACCA+AGG	+	Chr3:30697458-30697477	None:intergenic	45.0%
!	GGAGATTTCGGACTAGACTT+TGG	+	Chr3:30697004-30697023	None:intergenic	45.0%
!!	ACTAGACTTTGGAGTTGTCG+CGG	+	Chr3:30696993-30697012	None:intergenic	45.0%
!!	CAAGGAGCACTAGTCATACA+TGG	+	Chr3:30696851-30696870	None:intergenic	45.0%
!!	TGGCCTTATACTTGGAGTTC+CGG	-	Chr3:30696869-30696888	MsG0380013116.01.T01:intron	45.0%
!!	TTCCCAAGCGTTGGAGATTT+CGG	+	Chr3:30697016-30697035	None:intergenic	45.0%
!!	TTGAGCATGGGGTAATGGAT+TGG	-	Chr3:30694982-30695001	MsG0380013116.01.T01:CDS	45.0%
!!	TTGGACTTGTTGACCTTGGT+TGG	-	Chr3:30697442-30697461	MsG0380013116.01.T01:CDS	45.0%
!!!	ATTTTTTTATAAATTAAAGT+AGG	-	Chr3:30694641-30694660	MsG0380013116.01.T01:three_prime_UTR	5.0%
!!!	TTTTTTGATTAAAAAAATTT+AGG	-	Chr3:30695132-30695151	MsG0380013116.01.T01:CDS	5.0%
	AACGCTTGGGAAACACTCGA+GGG	-	Chr3:30697024-30697043	MsG0380013116.01.T01:intron	50.0%
	ACCGACCGGAACATTTCTCA+TGG	+	Chr3:30696477-30696496	None:intergenic	50.0%
	AGAAAGATGGTCACTGTCCC+AGG	+	Chr3:30697405-30697424	None:intergenic	50.0%
	AGCTCTTATCACTGCTGGTG+AGG	-	Chr3:30694514-30694533	MsG0380013116.01.T01:three_prime_UTR	50.0%
	AGGACACAAAGTTTGTGGCG+AGG	+	Chr3:30696903-30696922	None:intergenic	50.0%
	AGTCCGAAATCTCCAACGCT+TGG	-	Chr3:30697010-30697029	MsG0380013116.01.T01:intron	50.0%
	ATAAGAGCTTCACCTTCCCC+AGG	+	Chr3:30694503-30694522	None:intergenic	50.0%
	CACGCCTTGCAAAAATAGCG+CGG	+	Chr3:30696428-30696447	None:intergenic	50.0%
	CCACAAACTTTGTGTCCTCC+AGG	-	Chr3:30696905-30696924	MsG0380013116.01.T01:intron	50.0%
	CCTGGAGGACACAAAGTTTG+TGG	+	Chr3:30696908-30696927	None:intergenic	50.0%
	GATGATCCAACCCAAAGCTG+AGG	+	Chr3:30696637-30696656	None:intergenic	50.0%
	GGACACAAAGTTTGTGGCGA+GGG	+	Chr3:30696902-30696921	None:intergenic	50.0%
	GGTGAAGCTCTTATCACTGC+TGG	-	Chr3:30694509-30694528	MsG0380013116.01.T01:three_prime_UTR	50.0%
	GTCCGAAATCTCCAACGCTT+GGG	-	Chr3:30697011-30697030	MsG0380013116.01.T01:intron	50.0%
	GTGCCGGAACTCCAAGTATA+AGG	+	Chr3:30696875-30696894	None:intergenic	50.0%
	TGAGGAAAATGTTTCGCCGG+TGG	-	Chr3:30694532-30694551	MsG0380013116.01.T01:three_prime_UTR	50.0%
	TGCATCAAGAGCCTCAGAGA+TGG	+	Chr3:30696552-30696571	None:intergenic	50.0%
	TTCTTGATCTCTGCGGCATC+TGG	+	Chr3:30696182-30696201	None:intergenic	50.0%
!	GGACACGGGAGTAATTTGTC+TGG	+	Chr3:30696347-30696366	None:intergenic	50.0%
!!	CTAGACTTTGGAGTTGTCGC+GGG	+	Chr3:30696992-30697011	None:intergenic	50.0%
!!	GCAGGGTTAGCCATCAACAT+TGG	+	Chr3:30697286-30697305	None:intergenic	50.0%
!!	GTGCTCCTTGGCCTTATACT+TGG	-	Chr3:30696861-30696880	MsG0380013116.01.T01:intron	50.0%
!!	TAGAGTCCTCAGCTTTGGGT+TGG	-	Chr3:30696628-30696647	MsG0380013116.01.T01:intron	50.0%
!!!	TCAGCCGCGCTATTTTTGCA+AGG	-	Chr3:30696421-30696440	MsG0380013116.01.T01:intron	50.0%
	AGAAATGTTCCGGTCGGTGC+AGG	-	Chr3:30696479-30696498	MsG0380013116.01.T01:intron	55.0%
	CAACGCTTGGGAAACACTCG+AGG	-	Chr3:30697023-30697042	MsG0380013116.01.T01:intron	55.0%
	CTCGAGTGTTTCCCAAGCGT+TGG	+	Chr3:30697025-30697044	None:intergenic	55.0%
	GAAATGTTCCGGTCGGTGCA+GGG	-	Chr3:30696480-30696499	MsG0380013116.01.T01:intron	55.0%
	GGAAAATGTTTCGCCGGTGG+CGG	-	Chr3:30694535-30694554	MsG0380013116.01.T01:three_prime_UTR	55.0%
	GGAGTATGAGCGGGAAACCA+AGG	+	Chr3:30696971-30696990	None:intergenic	55.0%
	TCGCCACATCACCATCTCTG+AGG	-	Chr3:30696538-30696557	MsG0380013116.01.T01:intron	55.0%
	TTGATCTCTGCGGCATCTGG+TGG	+	Chr3:30696179-30696198	None:intergenic	55.0%
	TTGTGGCGAGGGAATTGTGC+CGG	+	Chr3:30696891-30696910	None:intergenic	55.0%
!	AGTTGTCGCGGGAGTATGAG+CGG	+	Chr3:30696981-30697000	None:intergenic	55.0%
!	GAGCCTCAGAGATGGTGATG+TGG	+	Chr3:30696544-30696563	None:intergenic	55.0%
!	TTTCTTCTCCCTGCACCGAC+CGG	+	Chr3:30696491-30696510	None:intergenic	55.0%
	ATCTCTGCGGCATCTGGTGG+TGG	+	Chr3:30696176-30696195	None:intergenic	60.0%
	TCTACATCCATCGCCGCCAC+CGG	+	Chr3:30694551-30694570	None:intergenic	60.0%
!	GTTGTCGCGGGAGTATGAGC+GGG	+	Chr3:30696980-30696999	None:intergenic	60.0%
	CGCTGTTGCAGCGTGGACAC+GGG	+	Chr3:30696361-30696380	None:intergenic	65.0%
	GCGCTGTTGCAGCGTGGACA+CGG	+	Chr3:30696362-30696381	None:intergenic	65.0%
	GTGTCCACGCTGCAACAGCG+CGG	-	Chr3:30696361-30696380	MsG0380013116.01.T01:intron	65.0%
	GTGTCCGCGCTGTTGCAGCG+TGG	+	Chr3:30696368-30696387	None:intergenic	70.0%
!	TGTTTCGCCGGTGGCGGCGA+TGG	-	Chr3:30694541-30694560	MsG0380013116.01.T01:three_prime_UTR	70.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	30694291	30697754	30694291	ID=MsG0380013116.01;Name=MsG0380013116.01
Chr3	mRNA	30694291	30697754	30694291	ID=MsG0380013116.01.T01;Parent=MsG0380013116.01;Name=MsG0380013116.01.T01;_AED=0.46;_eAED=0.46;_QI=155\|1\|1\|1\|1\|1\|2\|409\|468
Chr3	exon	30697411	30697754	30697411	ID=MsG0380013116.01.T01:exon:6547;Parent=MsG0380013116.01.T01
Chr3	exon	30694291	30695917	30694291	ID=MsG0380013116.01.T01:exon:6548;Parent=MsG0380013116.01.T01
Chr3	five_prime_UTR	30697600	30697754	30697600	ID=MsG0380013116.01.T01:five_prime_utr;Parent=MsG0380013116.01.T01
Chr3	CDS	30697411	30697599	30697411	ID=MsG0380013116.01.T01:cds;Parent=MsG0380013116.01.T01
Chr3	CDS	30694700	30695917	30694700	ID=MsG0380013116.01.T01:cds;Parent=MsG0380013116.01.T01
Chr3	three_prime_UTR	30694291	30694699	30694291	ID=MsG0380013116.01.T01:three_prime_utr;Parent=MsG0380013116.01.T01

Gene Sequence

>MsG0380013116.01.T01

ATGATTGTAACTAAGGACCCTGAAATTAAGCTCTTTGGGAAAAAGATTCTTTTTCCTGGGGAAGGTGAAGCTCTTATCACTGCTGGTGAGGAAAATGTTTCGCCGGTGGCGGCGATGGATGTAGAAGAAGAAAGAGATGAATATTATAGTGAGTCTGAGAATGAAGATGAAGAAGAAGAAATCGAGAAGGATCCTGAAGCAGATAAAGGTGCTGAGAAAAAGAAAGAAGCTGATCCACCACCAGATGCCGCAGAGATCAAGAACGACAACAACAATTCAGCAGCAACATTGGGTATTCAGAACCCGAAAACACCTTCCATAGATGAAGAAACTTCAAAATCCGAAAACGAACAAAGTGATACAACACCAAACAACAACAACGCTCAAGAGAAAACACTAAAGAAACCAGACAAATTACTCCCGTGTCCACGCTGCAACAGCGCGGACACAAAATTCTGTTACTACAATAATTACAACGTCAATCAGCCGCGCTATTTTTGCAAGGCGTGTCAAAGATATTGGACTGCAGGCGGAACCATGAGAAATGTTCCGGTCGGTGCAGGGAGAAGAAAAAATAAGAACAACTCTTCGTCACATTATCGCCACATCACCATCTCTGAGGCTCTTGATGCAGCAAGAATTGTTTCTCCTAATGGTACTCATCATCTTCAAAATTTGAAAACCAATGGTAGAGTCCTCAGCTTTGGGTTGGATCATCCACATATCTATGATTCATTGTCAAATGATCTCAATCCTGCGGAGAAAAAGGTTCTTAACGACACTCAAAATAATGGTGATGGTTTTTCGAGTGCTTCTTCTGTTACAGTTTCAAAATCTATGGAGGAAAGTGGTAAAAACATGTCACAAGAATCATTGCCACAGCAAAATAATGGTTTTATTCCTCAAGTTCCATGTATGACTAGTGCTCCTTGGCCTTATACTTGGAGTTCCGGCACAATTCCCTCGCCACAAACTTTGTGTCCTCCAGGATTTCCCATGTCATTTTACCCTGCTCCTTTTTGGAATGTTCCTTGGTTTCCCGCTCATACTCCCGCGACAACTCCAAAGTCTAGTCCGAAATCTCCAACGCTTGGGAAACACTCGAGGGATGATGACAACAACGACGAAATTGCTAAACAAGACCATTTGCAAACAGAAGAATCACCAAAACAAAGAAATGGATGTGTTTTGGTTCCTAAAACATTGAGAATTGATGATCCAAATGAAGCTGCAAAGAGTTCAATTTGGGAAACACTTGGAATTAAGAATGAAGGTTTGAGTAGAGGTGGTATGATTAAGGCTTTTCAATCAAAGAAAGATGGTAAAAACCATGTTCAAACCTCTCCAATGTTGATGGCTAACCCTGCAGCTTTAGCTAGATCACTTAATTTCCATGAAAACTCTTAA

Protein sequence

>MsG0380013116.01.T01

MIVTKDPEIKLFGKKILFPGEGEALITAGEENVSPVAAMDVEEERDEYYSESENEDEEEEIEKDPEADKGAEKKKEADPPPDAAEIKNDNNNSAATLGIQNPKTPSIDEETSKSENEQSDTTPNNNNAQEKTLKKPDKLLPCPRCNSADTKFCYYNNYNVNQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNNSSSHYRHITISEALDAARIVSPNGTHHLQNLKTNGRVLSFGLDHPHIYDSLSNDLNPAEKKVLNDTQNNGDGFSSASSVTVSKSMEESGKNMSQESLPQQNNGFIPQVPCMTSAPWPYTWSSGTIPSPQTLCPPGFPMSFYPAPFWNVPWFPAHTPATTPKSSPKSPTLGKHSRDDDNNDEIAKQDHLQTEESPKQRNGCVLVPKTLRIDDPNEAAKSSIWETLGIKNEGLSRGGMIKAFQSKKDGKNHVQTSPMLMANPAALARSLNFHENS*