Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043046.01.T01 | XP_039685611.1 | 81.217 | 575 | 26 | 2 | 1 | 493 | 36 | 610 | 0 | 929 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043046.01.T01 | A0A314KSQ4 | 57.913 | 575 | 159 | 3 | 1 | 492 | 5 | 579 | 0 | 681 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043046.01.T01 | A0A072TMQ6 | 81.217 | 575 | 26 | 2 | 1 | 493 | 1 | 575 | 0.0 | 928 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000814.01 | MsG0880043046.01 | 0.809603 | 1.744254e-50 | 1.028647e-47 |
| MsG0180001312.01 | MsG0880043046.01 | 0.804457 | 2.140854e-49 | 1.104339e-46 |
| MsG0180003673.01 | MsG0880043046.01 | 0.804141 | 2.490269e-49 | 1.274253e-46 |
| MsG0180003725.01 | MsG0880043046.01 | 0.831221 | 1.887247e-55 | 2.034816e-52 |
| MsG0180005730.01 | MsG0880043046.01 | 0.803451 | 3.464841e-49 | 1.741748e-46 |
| MsG0180005732.01 | MsG0880043046.01 | 0.803345 | 3.643256e-49 | 1.826394e-46 |
| MsG0780041387.01 | MsG0880043046.01 | 0.809192 | 2.136547e-50 | 1.246259e-47 |
| MsG0880043046.01 | MsG0880047745.01 | 0.803528 | 3.338800e-49 | 1.681806e-46 |
| MsG0280010722.01 | MsG0880043046.01 | 0.809384 | 1.943433e-50 | 1.139450e-47 |
| MsG0280010816.01 | MsG0880043046.01 | 0.800031 | 1.744118e-48 | 8.037487e-46 |
| MsG0380014866.01 | MsG0880043046.01 | 0.832113 | 1.137777e-55 | 1.259453e-52 |
| MsG0680035444.01 | MsG0880043046.01 | 0.809439 | 1.891376e-50 | 1.110515e-47 |
| MsG0480018778.01 | MsG0880043046.01 | 0.803649 | 3.151613e-49 | 1.592338e-46 |
| MsG0480019435.01 | MsG0880043046.01 | 0.800711 | 1.268026e-48 | 5.944996e-46 |
| MsG0480021917.01 | MsG0880043046.01 | 0.814387 | 1.581004e-51 | 1.059445e-48 |
| MsG0480022827.01 | MsG0880043046.01 | 0.808553 | 2.926358e-50 | 1.678272e-47 |
| MsG0580025723.01 | MsG0880043046.01 | 0.801526 | 8.636562e-49 | 4.133710e-46 |
| MsG0380016517.01 | MsG0880043046.01 | 0.807047 | 6.118052e-50 | 3.373115e-47 |
| MsG0380017048.01 | MsG0880043046.01 | 0.800369 | 1.488366e-48 | 6.918392e-46 |
| MsG0480018236.01 | MsG0880043046.01 | 0.805452 | 1.325776e-49 | 7.016722e-47 |
| MsG0480018318.01 | MsG0880043046.01 | 0.806689 | 7.280103e-50 | 3.976825e-47 |
| MsG0280007072.01 | MsG0880043046.01 | 0.819252 | 1.280134e-52 | 9.800289e-50 |
| MsG0280007496.01 | MsG0880043046.01 | 0.839374 | 1.646302e-57 | 2.269127e-54 |
| MsG0280008363.01 | MsG0880043046.01 | 0.820612 | 6.257304e-53 | 4.974591e-50 |
| MsG0780038828.01 | MsG0880043046.01 | 0.801670 | 8.070206e-49 | 3.876645e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0880043046.01 | MsG0480020122.01 | PPI |
| MsG0880043046.01 | MsG0880044688.01 | PPI |
| MsG0880043046.01 | MsG0580027191.01 | PPI |
| MsG0880043046.01 | MsG0580027033.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043046.01.T01 | MTR_8g027965 | 81.217 | 575 | 26 | 2 | 1 | 493 | 1 | 575 | 0.0 | 928 |
| MsG0880043046.01.T01 | MTR_8g027920 | 75.304 | 575 | 60 | 2 | 1 | 493 | 1 | 575 | 0.0 | 872 |
| MsG0880043046.01.T01 | MTR_8g027955 | 75.130 | 575 | 61 | 2 | 1 | 493 | 8 | 582 | 0.0 | 868 |
| MsG0880043046.01.T01 | MTR_8g027970 | 70.087 | 575 | 90 | 2 | 1 | 493 | 1 | 575 | 0.0 | 817 |
| MsG0880043046.01.T01 | MTR_7g117110 | 62.003 | 579 | 134 | 3 | 1 | 493 | 1 | 579 | 0.0 | 727 |
| MsG0880043046.01.T01 | MTR_7g117110 | 56.716 | 402 | 88 | 3 | 1 | 316 | 1 | 402 | 7.06e-154 | 444 |
| MsG0880043046.01.T01 | MTR_0102s0060 | 38.079 | 583 | 261 | 7 | 9 | 493 | 17 | 597 | 6.38e-134 | 400 |
| MsG0880043046.01.T01 | MTR_1g047730 | 62.698 | 252 | 79 | 3 | 246 | 493 | 122 | 362 | 2.76e-110 | 331 |
| MsG0880043046.01.T01 | MTR_1g047730 | 58.197 | 122 | 40 | 2 | 10 | 130 | 1 | 112 | 1.63e-34 | 133 |
| MsG0880043046.01.T01 | MTR_5g016320 | 34.201 | 576 | 280 | 9 | 10 | 491 | 20 | 590 | 4.17e-109 | 336 |
| MsG0880043046.01.T01 | MTR_0035s0150 | 33.511 | 564 | 281 | 9 | 12 | 489 | 21 | 576 | 2.14e-103 | 321 |
| MsG0880043046.01.T01 | MTR_2g081860 | 32.586 | 580 | 288 | 7 | 11 | 489 | 14 | 591 | 5.66e-99 | 310 |
| MsG0880043046.01.T01 | MTR_8g037720 | 48.910 | 321 | 90 | 3 | 225 | 493 | 137 | 435 | 3.67e-98 | 303 |
| MsG0880043046.01.T01 | MTR_8g037720 | 73.864 | 88 | 23 | 0 | 10 | 97 | 1 | 88 | 6.80e-36 | 138 |
| MsG0880043046.01.T01 | MTR_8g467000 | 31.196 | 577 | 297 | 7 | 11 | 489 | 15 | 589 | 6.36e-98 | 308 |
| MsG0880043046.01.T01 | MTR_4g045903 | 31.304 | 575 | 293 | 10 | 11 | 490 | 30 | 597 | 6.04e-95 | 300 |
| MsG0880043046.01.T01 | MTR_1g088765 | 32.862 | 566 | 273 | 12 | 7 | 468 | 7 | 569 | 1.63e-87 | 280 |
| MsG0880043046.01.T01 | MTR_1g088765 | 34.112 | 428 | 210 | 9 | 108 | 468 | 3 | 425 | 2.95e-68 | 226 |
| MsG0880043046.01.T01 | MTR_7g094190 | 28.723 | 564 | 287 | 16 | 11 | 468 | 5 | 559 | 1.33e-54 | 192 |
| MsG0880043046.01.T01 | MTR_7g094190 | 28.505 | 428 | 232 | 12 | 106 | 468 | 41 | 459 | 1.87e-39 | 149 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043046.01.T01 | AT2G46370 | 55.286 | 577 | 171 | 6 | 1 | 492 | 12 | 586 | 0.0 | 629 |
| MsG0880043046.01.T01 | AT2G46370 | 55.286 | 577 | 171 | 6 | 1 | 492 | 1 | 575 | 0.0 | 628 |
| MsG0880043046.01.T01 | AT2G46370 | 55.286 | 577 | 171 | 6 | 1 | 492 | 1 | 575 | 0.0 | 628 |
| MsG0880043046.01.T01 | AT2G46370 | 55.020 | 498 | 139 | 4 | 78 | 492 | 1 | 496 | 0.0 | 546 |
| MsG0880043046.01.T01 | AT4G03400 | 41.026 | 585 | 241 | 9 | 11 | 493 | 9 | 591 | 1.20e-142 | 422 |
| MsG0880043046.01.T01 | AT4G03400 | 41.026 | 585 | 241 | 9 | 11 | 493 | 9 | 591 | 1.20e-142 | 422 |
| MsG0880043046.01.T01 | AT2G23170 | 34.974 | 569 | 277 | 8 | 12 | 491 | 21 | 585 | 1.17e-110 | 340 |
| MsG0880043046.01.T01 | AT4G27260 | 33.558 | 593 | 286 | 8 | 2 | 489 | 7 | 596 | 8.22e-107 | 331 |
| MsG0880043046.01.T01 | AT4G37390 | 34.146 | 574 | 278 | 10 | 12 | 489 | 22 | 591 | 1.57e-106 | 330 |
| MsG0880043046.01.T01 | AT1G23160 | 34.489 | 577 | 272 | 12 | 9 | 490 | 13 | 578 | 5.70e-105 | 325 |
| MsG0880043046.01.T01 | AT2G14960 | 34.271 | 569 | 275 | 10 | 12 | 491 | 21 | 579 | 6.19e-105 | 325 |
| MsG0880043046.01.T01 | AT1G59500 | 35.552 | 571 | 268 | 13 | 12 | 489 | 22 | 585 | 2.26e-104 | 324 |
| MsG0880043046.01.T01 | AT5G51470 | 34.790 | 572 | 270 | 12 | 3 | 483 | 6 | 565 | 1.68e-102 | 319 |
| MsG0880043046.01.T01 | AT1G48660 | 32.686 | 566 | 284 | 10 | 14 | 489 | 7 | 565 | 2.24e-100 | 313 |
| MsG0880043046.01.T01 | AT1G48660 | 32.513 | 569 | 284 | 10 | 14 | 489 | 7 | 568 | 8.31e-100 | 311 |
| MsG0880043046.01.T01 | AT5G54510 | 32.456 | 570 | 285 | 7 | 18 | 489 | 29 | 596 | 8.01e-99 | 310 |
| MsG0880043046.01.T01 | AT5G13320 | 32.409 | 577 | 288 | 10 | 8 | 489 | 5 | 574 | 3.23e-95 | 300 |
| MsG0880043046.01.T01 | AT5G13320 | 32.409 | 577 | 288 | 10 | 8 | 489 | 5 | 574 | 3.23e-95 | 300 |
| MsG0880043046.01.T01 | AT5G13320 | 32.409 | 577 | 288 | 10 | 8 | 489 | 20 | 589 | 5.14e-95 | 300 |
| MsG0880043046.01.T01 | AT5G13360 | 32.812 | 576 | 287 | 12 | 9 | 489 | 9 | 579 | 8.52e-92 | 291 |
| MsG0880043046.01.T01 | AT5G13360 | 32.812 | 576 | 287 | 12 | 9 | 489 | 9 | 579 | 8.52e-92 | 291 |
| MsG0880043046.01.T01 | AT5G13350 | 31.175 | 587 | 290 | 13 | 7 | 489 | 4 | 580 | 3.64e-91 | 290 |
| MsG0880043046.01.T01 | AT5G13350 | 31.175 | 587 | 290 | 13 | 7 | 489 | 4 | 580 | 3.64e-91 | 290 |
| MsG0880043046.01.T01 | AT5G13360 | 32.812 | 576 | 287 | 12 | 9 | 489 | 87 | 657 | 3.88e-91 | 292 |
| MsG0880043046.01.T01 | AT5G13370 | 32.534 | 584 | 286 | 15 | 7 | 489 | 4 | 580 | 2.52e-90 | 288 |
| MsG0880043046.01.T01 | AT2G47750 | 33.218 | 578 | 286 | 12 | 7 | 489 | 5 | 577 | 7.41e-90 | 286 |
| MsG0880043046.01.T01 | AT1G28130 | 31.104 | 598 | 285 | 15 | 9 | 489 | 9 | 596 | 5.75e-84 | 271 |
| MsG0880043046.01.T01 | AT5G13380 | 31.634 | 569 | 287 | 13 | 17 | 489 | 47 | 609 | 1.36e-83 | 271 |
| MsG0880043046.01.T01 | AT5G51470 | 36.073 | 438 | 217 | 7 | 102 | 483 | 45 | 475 | 1.76e-83 | 266 |
| MsG0880043046.01.T01 | AT1G48670 | 31.086 | 534 | 282 | 11 | 16 | 489 | 10 | 517 | 7.01e-77 | 250 |
| MsG0880043046.01.T01 | AT1G48670 | 32.678 | 407 | 214 | 6 | 138 | 489 | 5 | 406 | 4.01e-70 | 229 |
| MsG0880043046.01.T01 | AT1G28130 | 31.637 | 452 | 220 | 10 | 118 | 489 | 11 | 453 | 6.32e-66 | 220 |
| MsG0880043046.01.T01 | AT1G48690 | 28.272 | 191 | 92 | 5 | 14 | 166 | 7 | 190 | 4.70e-15 | 73.9 |
Find 107 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACATGTCTTGAAGCTTTC+AGG | 0.174013 | 8:-18133486 | None:intergenic |
| GGAAACACTGAGGAGGATTT+TGG | 0.205703 | 8:+18133407 | MsG0880043046.01.T01:CDS |
| CTGCGAATAAACCTGATTTC+TGG | 0.217720 | 8:-18135423 | None:intergenic |
| CAGCAATATTTGCAACAATT+TGG | 0.228528 | 8:-18135841 | None:intergenic |
| TCAGAACATTTGAACAAGTT+TGG | 0.244473 | 8:+18134560 | MsG0880043046.01.T01:CDS |
| AACATAGTGTCCTGGTTCTT+TGG | 0.254133 | 8:-18135580 | None:intergenic |
| CTGAATACTTGCAGAGTTTA+GGG | 0.260840 | 8:+18133445 | MsG0880043046.01.T01:CDS |
| CATAATGCTCAAGAATCTTC+TGG | 0.275515 | 8:-18135758 | None:intergenic |
| ATTGGTCACTTACAAAGATT+TGG | 0.278435 | 8:+18133512 | MsG0880043046.01.T01:CDS |
| CTTGAGCATTATGTTGGATT+AGG | 0.282026 | 8:+18135768 | MsG0880043046.01.T01:CDS |
| CAGAACATTTGAACAAGTTT+GGG | 0.300593 | 8:+18134561 | MsG0880043046.01.T01:CDS |
| GCAAACTCAGGAGCCACTTT+AGG | 0.305629 | 8:-18134892 | None:intergenic |
| GCTGAATACTTGCAGAGTTT+AGG | 0.314740 | 8:+18133444 | MsG0880043046.01.T01:CDS |
| GGAGATGTAGTAAAGGTTAC+AGG | 0.323853 | 8:+18135384 | MsG0880043046.01.T01:CDS |
| CAGGACACTATGTTATCTTC+TGG | 0.331531 | 8:+18135589 | MsG0880043046.01.T01:CDS |
| ATTCCTTTGAAACAACTTGA+TGG | 0.332460 | 8:+18134955 | MsG0880043046.01.T01:CDS |
| TGGATCAAGTTAGCTAGTTC+AGG | 0.340099 | 8:-18134679 | None:intergenic |
| TCAACTATTCTATTGATATA+AGG | 0.342032 | 8:-18133537 | None:intergenic |
| CAAATTGTTGCAAATATTGC+TGG | 0.342334 | 8:+18135842 | MsG0880043046.01.T01:CDS |
| TTGCAGGCTTATACAGGTAT+AGG | 0.344670 | 8:+18135358 | MsG0880043046.01.T01:intron |
| GATAATTTGCAGGCTTATAC+AGG | 0.362611 | 8:+18135352 | MsG0880043046.01.T01:intron |
| TTTAGACATAGCAGTTCTAA+TGG | 0.364577 | 8:-18134641 | None:intergenic |
| AGAGAGTTTCCCATCGAAAA+TGG | 0.365287 | 8:+18134271 | MsG0880043046.01.T01:intron |
| ATCTTGGCTATGTTAGTTCT+AGG | 0.369530 | 8:+18135682 | MsG0880043046.01.T01:CDS |
| AAGTTAGCTAGTTCAGGATT+TGG | 0.387314 | 8:-18134673 | None:intergenic |
| TTCGAACAAGTCGGAGTTCA+AGG | 0.394162 | 8:-18135725 | None:intergenic |
| GTAACTCAACTCCAGAAATC+AGG | 0.394537 | 8:+18135412 | MsG0880043046.01.T01:CDS |
| CTTAAGGAAATATCAGTGAT+TGG | 0.397201 | 8:-18133591 | None:intergenic |
| AATGCATAGGATTGAGCAAT+TGG | 0.406780 | 8:+18134707 | MsG0880043046.01.T01:CDS |
| TAGAGTGTTTGCTGAAAATC+AGG | 0.407986 | 8:-18134454 | None:intergenic |
| GGACTAAATATTACATCATC+TGG | 0.408150 | 8:-18134433 | None:intergenic |
| CAATCACTGATATTTCCTTA+AGG | 0.436796 | 8:+18133592 | MsG0880043046.01.T01:CDS |
| TCTAGGAAAGTCAAAGGTAT+TGG | 0.442129 | 8:+18135699 | MsG0880043046.01.T01:CDS |
| GAAACAACTTGATGGAACTA+AGG | 0.444035 | 8:+18134963 | MsG0880043046.01.T01:CDS |
| TTCACATCAGTTAATCCAAC+TGG | 0.449966 | 8:-18134997 | None:intergenic |
| AAGATTCTTGAGCATTATGT+TGG | 0.450012 | 8:+18135762 | MsG0880043046.01.T01:CDS |
| TATATCAATAGAATAGTTGA+TGG | 0.455629 | 8:+18133540 | MsG0880043046.01.T01:CDS |
| TTCAAGACACCTAGGTGTAT+TGG | 0.458890 | 8:+18135807 | MsG0880043046.01.T01:CDS |
| TGCAACAATTTGGTGTTTGT+AGG | 0.458930 | 8:-18135831 | None:intergenic |
| TTGCAGAGTTTAGGGCTGAA+TGG | 0.459275 | 8:+18133453 | MsG0880043046.01.T01:CDS |
| ATTTATAGTACCTGCAGGAT+TGG | 0.460434 | 8:-18135049 | None:intergenic |
| GACATAGCAGTTCTAATGGA+TGG | 0.469517 | 8:-18134637 | None:intergenic |
| GTTCCATCAAGTTGTTTCAA+AGG | 0.473335 | 8:-18134958 | None:intergenic |
| TGCATGGTATCCTTGTATCC+TGG | 0.473408 | 8:-18134385 | None:intergenic |
| TGATTTCTGGAGTTGAGTTA+CGG | 0.482107 | 8:-18135410 | None:intergenic |
| TGAAAAGTAGTCCACATAAG+AGG | 0.487540 | 8:-18134483 | None:intergenic |
| GCAAATGTGTTCAGAAATCC+AGG | 0.491028 | 8:+18134367 | MsG0880043046.01.T01:CDS |
| GCTGCTGTAGATGAAGCTTA+AGG | 0.493940 | 8:-18134299 | None:intergenic |
| TGAGAAATTTGACATGGAAA+AGG | 0.500024 | 8:+18133335 | MsG0880043046.01.T01:CDS |
| AGGACACTATGTTATCTTCT+GGG | 0.504762 | 8:+18135590 | MsG0880043046.01.T01:CDS |
| GGATTAACTGATGTGAAGAT+TGG | 0.505470 | 8:+18135003 | MsG0880043046.01.T01:CDS |
| AGCAAATTATCCCAAACAAA+AGG | 0.505765 | 8:+18134319 | MsG0880043046.01.T01:CDS |
| TTCAAATGTGAATCCTAAAG+TGG | 0.512193 | 8:+18134879 | MsG0880043046.01.T01:CDS |
| ACATCATCTGGACTGACACT+AGG | 0.512214 | 8:-18134421 | None:intergenic |
| TCATAATAGGGTGCAGGTGA+AGG | 0.513983 | 8:+18133289 | MsG0880043046.01.T01:five_prime_UTR |
| GAACTCCGACTTGTTCGAAA+AGG | 0.514599 | 8:+18135729 | MsG0880043046.01.T01:CDS |
| CAGAAATCAGGTTTATTCGC+AGG | 0.518549 | 8:+18135424 | MsG0880043046.01.T01:CDS |
| TTCACAAGGCTGTGTGCAAA+TGG | 0.518700 | 8:-18134532 | None:intergenic |
| CTTCAAGACATGTGTTCCAT+TGG | 0.524425 | 8:+18133494 | MsG0880043046.01.T01:CDS |
| TCAATCCTATGCATTTCTTG+TGG | 0.525426 | 8:-18134699 | None:intergenic |
| CTCTACTGTCACCTCTTATG+TGG | 0.530074 | 8:+18134472 | MsG0880043046.01.T01:CDS |
| GAAGATTGGCGAGGAGTATG+AGG | 0.530531 | 8:+18135017 | MsG0880043046.01.T01:CDS |
| ATTCATAGTAAGCAACTTGA+GGG | 0.532986 | 8:-18134930 | None:intergenic |
| TGGTGAATGTTGTACATGCT+TGG | 0.536976 | 8:+18135644 | MsG0880043046.01.T01:CDS |
| AGTTGATTTGCAACTATCAG+TGG | 0.539490 | 8:+18135488 | MsG0880043046.01.T01:CDS |
| AACATTTGAACAAGTTTGGG+AGG | 0.539596 | 8:+18134564 | MsG0880043046.01.T01:CDS |
| GTTCAGAAATCCAGGATACA+AGG | 0.539977 | 8:+18134375 | MsG0880043046.01.T01:CDS |
| TCGAACAAGTCGGAGTTCAA+GGG | 0.555134 | 8:-18135724 | None:intergenic |
| TAGGCTAGGAGATGTAGTAA+AGG | 0.555730 | 8:+18135377 | MsG0880043046.01.T01:CDS |
| ACAAAAGGAGGTGTGACAGC+AGG | 0.561607 | 8:+18134334 | MsG0880043046.01.T01:CDS |
| CATCATCTGGACTGACACTA+GGG | 0.564110 | 8:-18134420 | None:intergenic |
| GGCTTATACAGGTATAGGCT+AGG | 0.570264 | 8:+18135363 | MsG0880043046.01.T01:intron |
| ATTTCTGAACACATTTGCTG+TGG | 0.570625 | 8:-18134362 | None:intergenic |
| AAATCTTTGTAAGTGACCAA+TGG | 0.572733 | 8:-18133510 | None:intergenic |
| GTGAAGGACTGTGAAGATGA+AGG | 0.573738 | 8:+18133305 | MsG0880043046.01.T01:exon |
| GGATGCTGAGAATGTTCAGA+AGG | 0.575616 | 8:+18133386 | MsG0880043046.01.T01:CDS |
| AATTCATAGTAAGCAACTTG+AGG | 0.580423 | 8:-18134931 | None:intergenic |
| AGGATACAAGGATACCATGC+AGG | 0.584507 | 8:+18134387 | MsG0880043046.01.T01:CDS |
| TTGATCCACAAGAAATGCAT+AGG | 0.591375 | 8:+18134694 | MsG0880043046.01.T01:CDS |
| CAGAAGATAACATAGTGTCC+TGG | 0.592657 | 8:-18135588 | None:intergenic |
| GAAATTTGACATGGAAAAGG+TGG | 0.599268 | 8:+18133338 | MsG0880043046.01.T01:CDS |
| GTTAGTTCTAGGAAAGTCAA+AGG | 0.600167 | 8:+18135693 | MsG0880043046.01.T01:CDS |
| AAGGTGGAGCTTGAGCCAGT+TGG | 0.606144 | 8:+18134982 | MsG0880043046.01.T01:CDS |
| ACAACATAAGTAGCAAACTC+AGG | 0.609304 | 8:-18134904 | None:intergenic |
| CGGCTCAATTCAAGACACCT+AGG | 0.619274 | 8:+18135799 | MsG0880043046.01.T01:CDS |
| TTTCTCCTCAGCTAACAACT+CGG | 0.619996 | 8:-18135520 | None:intergenic |
| AGGTGGTAGAAGAATTTGAG+AGG | 0.622858 | 8:+18133355 | MsG0880043046.01.T01:CDS |
| CTTGTTACTGACATCAGAGA+AGG | 0.627007 | 8:+18134589 | MsG0880043046.01.T01:CDS |
| ACAACTTGATGGAACTAAGG+TGG | 0.630614 | 8:+18134966 | MsG0880043046.01.T01:CDS |
| AGCATCCGAGTTGTTAGCTG+AGG | 0.635595 | 8:+18135515 | MsG0880043046.01.T01:CDS |
| AGCTGAGGAGAAAATTGAAG+TGG | 0.636600 | 8:+18135530 | MsG0880043046.01.T01:CDS |
| TGTTGGATTAGGAGCATCTG+CGG | 0.638763 | 8:+18135779 | MsG0880043046.01.T01:CDS |
| AGAATTTGAGAGGCTAACAA+AGG | 0.640125 | 8:+18133365 | MsG0880043046.01.T01:CDS |
| GTTATCTTCTGGGAAATCAG+TGG | 0.640384 | 8:+18135600 | MsG0880043046.01.T01:CDS |
| GTTTCCCATCGAAAATGGCA+AGG | 0.646216 | 8:+18134276 | MsG0880043046.01.T01:CDS |
| GAGATGTAGTAAAGGTTACA+GGG | 0.646750 | 8:+18135385 | MsG0880043046.01.T01:CDS |
| AAATTATCCCAAACAAAAGG+AGG | 0.648999 | 8:+18134322 | MsG0880043046.01.T01:CDS |
| TTCAGAAGGAAACACTGAGG+AGG | 0.654984 | 8:+18133400 | MsG0880043046.01.T01:CDS |
| GAAGCAAGTGATGAAGTGCT+TGG | 0.664960 | 8:+18135624 | MsG0880043046.01.T01:CDS |
| ATTGATTTATCCAAAGAACC+AGG | 0.665402 | 8:+18135570 | MsG0880043046.01.T01:CDS |
| AATAACTGAGAAATTTGACA+TGG | 0.666616 | 8:+18133329 | MsG0880043046.01.T01:CDS |
| ATGTTCTGAAAGCATTCACA+AGG | 0.667828 | 8:-18134546 | None:intergenic |
| ATCATCTGGACTGACACTAG+GGG | 0.679278 | 8:-18134419 | None:intergenic |
| GTGTCACATAGATGTTTGTG+AGG | 0.683315 | 8:+18136038 | MsG0880043046.01.T01:intron |
| AACTGATGTGAAGATTGGCG+AGG | 0.692343 | 8:+18135008 | MsG0880043046.01.T01:CDS |
| TTTGTAGGACCAATACACCT+AGG | 0.702315 | 8:-18135816 | None:intergenic |
| ATGTTCAGAAGGAAACACTG+AGG | 0.774484 | 8:+18133397 | MsG0880043046.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTACATTTTTTTTCATAAT+AGG | + | Chr8:18133276-18133295 | MsG0880043046.01.T01:five_prime_UTR | 10.0% |
| !!! | TCATTTTTTTAAATTACTAT+TGG | + | Chr8:18133955-18133974 | MsG0880043046.01.T01:intron | 10.0% |
| !!! | TTACATTTTTTTTCATAATA+GGG | + | Chr8:18133277-18133296 | MsG0880043046.01.T01:five_prime_UTR | 10.0% |
| !!! | TTATTAGATTTATTTTTATG+AGG | + | Chr8:18134171-18134190 | MsG0880043046.01.T01:intron | 10.0% |
| !! | AAAAAATGAAAGTGATTAAA+TGG | - | Chr8:18133944-18133963 | None:intergenic | 15.0% |
| !! | AAGATTACTTATTATATTTG+AGG | - | Chr8:18135147-18135166 | None:intergenic | 15.0% |
| !! | TCTATGAAAAAAATATAAAG+TGG | + | Chr8:18136064-18136083 | MsG0880043046.01.T01:three_prime_UTR | 15.0% |
| !! | TTGTTTATGATAATTAATCT+TGG | + | Chr8:18135330-18135349 | MsG0880043046.01.T01:intron | 15.0% |
| !! | TATATCAATAGAATAGTTGA+TGG | + | Chr8:18133540-18133559 | MsG0880043046.01.T01:CDS | 20.0% |
| !! | TCAACTATTCTATTGATATA+AGG | - | Chr8:18133540-18133559 | None:intergenic | 20.0% |
| !!! | TCATTTTCTCAAATTATCAT+TGG | - | Chr8:18134071-18134090 | None:intergenic | 20.0% |
| ! | AAAAATATAAAGTGGCACTA+AGG | + | Chr8:18136072-18136091 | MsG0880043046.01.T01:three_prime_UTR | 25.0% |
| ! | AAATCTGAAAAGATATCATG+TGG | - | Chr8:18135296-18135315 | None:intergenic | 25.0% |
| ! | AAGATTGAATCTCAGTAAAT+TGG | - | Chr8:18135249-18135268 | None:intergenic | 25.0% |
| ! | AATAACTGAGAAATTTGACA+TGG | + | Chr8:18133329-18133348 | MsG0880043046.01.T01:CDS | 25.0% |
| !! | ATTAATCTTGGATAATTTGC+AGG | + | Chr8:18135342-18135361 | MsG0880043046.01.T01:intron | 25.0% |
| AAAATGTGTGTCATACCTTA+AGG | - | Chr8:18133610-18133629 | None:intergenic | 30.0% | |
| AAAGAATTTATAGTACCTGC+AGG | - | Chr8:18135057-18135076 | None:intergenic | 30.0% | |
| AAATCTTTGTAAGTGACCAA+TGG | - | Chr8:18133513-18133532 | None:intergenic | 30.0% | |
| AAATTATCCCAAACAAAAGG+AGG | + | Chr8:18134322-18134341 | MsG0880043046.01.T01:CDS | 30.0% | |
| AAGATTCTTGAGCATTATGT+TGG | + | Chr8:18135762-18135781 | MsG0880043046.01.T01:CDS | 30.0% | |
| AATTCATAGTAAGCAACTTG+AGG | - | Chr8:18134934-18134953 | None:intergenic | 30.0% | |
| AGCAAATTATCCCAAACAAA+AGG | + | Chr8:18134319-18134338 | MsG0880043046.01.T01:CDS | 30.0% | |
| ATTCATAGTAAGCAACTTGA+GGG | - | Chr8:18134933-18134952 | None:intergenic | 30.0% | |
| ATTGGTCACTTACAAAGATT+TGG | + | Chr8:18133512-18133531 | MsG0880043046.01.T01:CDS | 30.0% | |
| CAAATTGTTGCAAATATTGC+TGG | + | Chr8:18135842-18135861 | MsG0880043046.01.T01:CDS | 30.0% | |
| CAATCACTGATATTTCCTTA+AGG | + | Chr8:18133592-18133611 | MsG0880043046.01.T01:CDS | 30.0% | |
| CAGAACATTTGAACAAGTTT+GGG | + | Chr8:18134561-18134580 | MsG0880043046.01.T01:CDS | 30.0% | |
| CAGCAATATTTGCAACAATT+TGG | - | Chr8:18135844-18135863 | None:intergenic | 30.0% | |
| CTAATGCTAAGTATGTTCTA+GGG | + | Chr8:18134754-18134773 | MsG0880043046.01.T01:intron | 30.0% | |
| CTTAAGGAAATATCAGTGAT+TGG | - | Chr8:18133594-18133613 | None:intergenic | 30.0% | |
| GGACTAAATATTACATCATC+TGG | - | Chr8:18134436-18134455 | None:intergenic | 30.0% | |
| TCAAACAATTCATCATTCCA+CGG | - | Chr8:18133741-18133760 | None:intergenic | 30.0% | |
| TCAGAACATTTGAACAAGTT+TGG | + | Chr8:18134560-18134579 | MsG0880043046.01.T01:CDS | 30.0% | |
| TGAATCATACTTGTTCCTAA+AGG | - | Chr8:18133796-18133815 | None:intergenic | 30.0% | |
| TGAGAAATTTGACATGGAAA+AGG | + | Chr8:18133335-18133354 | MsG0880043046.01.T01:CDS | 30.0% | |
| TTAAAACTCGTCACAAGTAT+TGG | + | Chr8:18134097-18134116 | MsG0880043046.01.T01:intron | 30.0% | |
| TTCAAATGTGAATCCTAAAG+TGG | + | Chr8:18134879-18134898 | MsG0880043046.01.T01:CDS | 30.0% | |
| ! | ATAAAACCTCTTTTGCCTTT+AGG | + | Chr8:18133778-18133797 | MsG0880043046.01.T01:intron | 30.0% |
| ! | ATTGATTTATCCAAAGAACC+AGG | + | Chr8:18135570-18135589 | MsG0880043046.01.T01:CDS | 30.0% |
| ! | TACTCTAAAGACTGAATTGA+AGG | - | Chr8:18135115-18135134 | None:intergenic | 30.0% |
| ! | TTTAGACATAGCAGTTCTAA+TGG | - | Chr8:18134644-18134663 | None:intergenic | 30.0% |
| ! | TTTCTTCATGATGCTTTTCT+CGG | + | Chr8:18135191-18135210 | MsG0880043046.01.T01:intron | 30.0% |
| !! | ATTCCTTTGAAACAACTTGA+TGG | + | Chr8:18134955-18134974 | MsG0880043046.01.T01:CDS | 30.0% |
| !!! | TTTTTTTCATAATAGGGTGC+AGG | + | Chr8:18133283-18133302 | MsG0880043046.01.T01:five_prime_UTR | 30.0% |
| AACATTTGAACAAGTTTGGG+AGG | + | Chr8:18134564-18134583 | MsG0880043046.01.T01:CDS | 35.0% | |
| AACTGAAAAAACTCGCTCAT+TGG | + | Chr8:18133205-18133224 | MsG0880043046.01.T01:five_prime_UTR | 35.0% | |
| AAGTTAGCTAGTTCAGGATT+TGG | - | Chr8:18134676-18134695 | None:intergenic | 35.0% | |
| AATGCATAGGATTGAGCAAT+TGG | + | Chr8:18134707-18134726 | MsG0880043046.01.T01:CDS | 35.0% | |
| ACAACATAAGTAGCAAACTC+AGG | - | Chr8:18134907-18134926 | None:intergenic | 35.0% | |
| AGAATTTGAGAGGCTAACAA+AGG | + | Chr8:18133365-18133384 | MsG0880043046.01.T01:CDS | 35.0% | |
| AGGACACTATGTTATCTTCT+GGG | + | Chr8:18135590-18135609 | MsG0880043046.01.T01:CDS | 35.0% | |
| ATAGGATTGAGCAATTGGTA+TGG | + | Chr8:18134712-18134731 | MsG0880043046.01.T01:intron | 35.0% | |
| ATGGGAAACTCTCTACATAA+TGG | - | Chr8:18134265-18134284 | None:intergenic | 35.0% | |
| ATTTATAGTACCTGCAGGAT+TGG | - | Chr8:18135052-18135071 | None:intergenic | 35.0% | |
| CATAATGCTCAAGAATCTTC+TGG | - | Chr8:18135761-18135780 | None:intergenic | 35.0% | |
| CCTAATGCTAAGTATGTTCT+AGG | + | Chr8:18134753-18134772 | MsG0880043046.01.T01:intron | 35.0% | |
| CCTAGAACATACTTAGCATT+AGG | - | Chr8:18134756-18134775 | None:intergenic | 35.0% | |
| CTACGTGTCAATGTCTATTT+AGG | + | Chr8:18133981-18134000 | MsG0880043046.01.T01:intron | 35.0% | |
| CTGAATACTTGCAGAGTTTA+GGG | + | Chr8:18133445-18133464 | MsG0880043046.01.T01:CDS | 35.0% | |
| CTTGAGCATTATGTTGGATT+AGG | + | Chr8:18135768-18135787 | MsG0880043046.01.T01:CDS | 35.0% | |
| GAAACAACTTGATGGAACTA+AGG | + | Chr8:18134963-18134982 | MsG0880043046.01.T01:CDS | 35.0% | |
| GAAATTTGACATGGAAAAGG+TGG | + | Chr8:18133338-18133357 | MsG0880043046.01.T01:CDS | 35.0% | |
| GAGATGTAGTAAAGGTTACA+GGG | + | Chr8:18135385-18135404 | MsG0880043046.01.T01:CDS | 35.0% | |
| GGAAGCAAAAATATATTCCG+TGG | + | Chr8:18133721-18133740 | MsG0880043046.01.T01:intron | 35.0% | |
| GGATTAACTGATGTGAAGAT+TGG | + | Chr8:18135003-18135022 | MsG0880043046.01.T01:CDS | 35.0% | |
| TATTTCCTGTCTATGAAGCT+CGG | + | Chr8:18134023-18134042 | MsG0880043046.01.T01:intron | 35.0% | |
| TCAATCCTATGCATTTCTTG+TGG | - | Chr8:18134702-18134721 | None:intergenic | 35.0% | |
| TCAGTAAATTGGTGAATGCA+AGG | - | Chr8:18135238-18135257 | None:intergenic | 35.0% | |
| TGAAAAGTAGTCCACATAAG+AGG | - | Chr8:18134486-18134505 | None:intergenic | 35.0% | |
| TGTCGAATATAGACATGTGT+TGG | - | Chr8:18133895-18133914 | None:intergenic | 35.0% | |
| TTCACATCAGTTAATCCAAC+TGG | - | Chr8:18135000-18135019 | None:intergenic | 35.0% | |
| TTGATCCACAAGAAATGCAT+AGG | + | Chr8:18134694-18134713 | MsG0880043046.01.T01:CDS | 35.0% | |
| TTTCTGCTACTCAGTTATAG+TGG | + | Chr8:18134221-18134240 | MsG0880043046.01.T01:intron | 35.0% | |
| ! | ATCTTGGCTATGTTAGTTCT+AGG | + | Chr8:18135682-18135701 | MsG0880043046.01.T01:CDS | 35.0% |
| ! | ATGTTCCTTTTCGAACAAGT+CGG | - | Chr8:18135737-18135756 | None:intergenic | 35.0% |
| ! | ATTTCTGAACACATTTGCTG+TGG | - | Chr8:18134365-18134384 | None:intergenic | 35.0% |
| ! | CAATTGGTATGGATTGATAC+CGG | + | Chr8:18134723-18134742 | MsG0880043046.01.T01:intron | 35.0% |
| ! | GACAAGTCTTTTGTTGATCT+TGG | + | Chr8:18135666-18135685 | MsG0880043046.01.T01:CDS | 35.0% |
| ! | GATAATTTGCAGGCTTATAC+AGG | + | Chr8:18135352-18135371 | MsG0880043046.01.T01:intron | 35.0% |
| ! | GATTTTTCTCCTATTCTCAC+TGG | + | Chr8:18133564-18133583 | MsG0880043046.01.T01:CDS | 35.0% |
| ! | GTTCCATCAAGTTGTTTCAA+AGG | - | Chr8:18134961-18134980 | None:intergenic | 35.0% |
| ! | TAGAGTGTTTGCTGAAAATC+AGG | - | Chr8:18134457-18134476 | None:intergenic | 35.0% |
| ! | TCTAGGAAAGTCAAAGGTAT+TGG | + | Chr8:18135699-18135718 | MsG0880043046.01.T01:CDS | 35.0% |
| ! | TGAATTGTTTGAAACCACAG+TGG | + | Chr8:18133749-18133768 | MsG0880043046.01.T01:intron | 35.0% |
| !! | AGTTGATTTGCAACTATCAG+TGG | + | Chr8:18135488-18135507 | MsG0880043046.01.T01:CDS | 35.0% |
| !! | ATGTTCTGAAAGCATTCACA+AGG | - | Chr8:18134549-18134568 | None:intergenic | 35.0% |
| !! | CTTTTTCGCTTCAAATGAGA+AGG | - | Chr8:18133642-18133661 | None:intergenic | 35.0% |
| !! | GGTTTTATATATCTCCACTG+TGG | - | Chr8:18133766-18133785 | None:intergenic | 35.0% |
| !! | GTTAGTTCTAGGAAAGTCAA+AGG | + | Chr8:18135693-18135712 | MsG0880043046.01.T01:CDS | 35.0% |
| !! | TGATTTCTGGAGTTGAGTTA+CGG | - | Chr8:18135413-18135432 | None:intergenic | 35.0% |
| !! | TGCAACAATTTGGTGTTTGT+AGG | - | Chr8:18135834-18135853 | None:intergenic | 35.0% |
| !!! | ATGAGCGAGTTTTTTCAGTT+TGG | - | Chr8:18133205-18133224 | None:intergenic | 35.0% |
| !!! | ATTGGTTTTCCAGTGAGAAT+AGG | - | Chr8:18133576-18133595 | None:intergenic | 35.0% |
| ACAACTTGATGGAACTAAGG+TGG | + | Chr8:18134966-18134985 | MsG0880043046.01.T01:CDS | 40.0% | |
| ACACATGTCTTGAAGCTTTC+AGG | - | Chr8:18133489-18133508 | None:intergenic | 40.0% | |
| AGAGAGTTTCCCATCGAAAA+TGG | + | Chr8:18134271-18134290 | MsG0880043046.01.T01:intron | 40.0% | |
| AGCTGAGGAGAAAATTGAAG+TGG | + | Chr8:18135530-18135549 | MsG0880043046.01.T01:CDS | 40.0% | |
| AGGTGGTAGAAGAATTTGAG+AGG | + | Chr8:18133355-18133374 | MsG0880043046.01.T01:CDS | 40.0% | |
| ATGTTCAGAAGGAAACACTG+AGG | + | Chr8:18133397-18133416 | MsG0880043046.01.T01:CDS | 40.0% | |
| CACACGTGTCAATATCGTAT+CGG | - | Chr8:18133918-18133937 | None:intergenic | 40.0% | |
| CAGAAATCAGGTTTATTCGC+AGG | + | Chr8:18135424-18135443 | MsG0880043046.01.T01:CDS | 40.0% | |
| CAGAAGATAACATAGTGTCC+TGG | - | Chr8:18135591-18135610 | None:intergenic | 40.0% | |
| CAGGACACTATGTTATCTTC+TGG | + | Chr8:18135589-18135608 | MsG0880043046.01.T01:CDS | 40.0% | |
| CCAATGTAGCACATAGTTGA+AGG | + | Chr8:18133857-18133876 | MsG0880043046.01.T01:intron | 40.0% | |
| CCTTCAACTATGTGCTACAT+TGG | - | Chr8:18133860-18133879 | None:intergenic | 40.0% | |
| CTGCGAATAAACCTGATTTC+TGG | - | Chr8:18135426-18135445 | None:intergenic | 40.0% | |
| CTTAGCATTAGGAAAAGCTC+CGG | - | Chr8:18134745-18134764 | None:intergenic | 40.0% | |
| CTTCAAGACATGTGTTCCAT+TGG | + | Chr8:18133494-18133513 | MsG0880043046.01.T01:CDS | 40.0% | |
| CTTCAGATTGAAGACGTGTT+TGG | - | Chr8:18134143-18134162 | None:intergenic | 40.0% | |
| CTTGTTACTGACATCAGAGA+AGG | + | Chr8:18134589-18134608 | MsG0880043046.01.T01:CDS | 40.0% | |
| CTTGTTCCTAAAGGCAAAAG+AGG | - | Chr8:18133787-18133806 | None:intergenic | 40.0% | |
| GAAAAGTTGAGACACTATGC+AGG | + | Chr8:18134806-18134825 | MsG0880043046.01.T01:intron | 40.0% | |
| GCAAATGTGTTCAGAAATCC+AGG | + | Chr8:18134367-18134386 | MsG0880043046.01.T01:CDS | 40.0% | |
| GCTGAATACTTGCAGAGTTT+AGG | + | Chr8:18133444-18133463 | MsG0880043046.01.T01:CDS | 40.0% | |
| GGAGATGTAGTAAAGGTTAC+AGG | + | Chr8:18135384-18135403 | MsG0880043046.01.T01:CDS | 40.0% | |
| GTAACTCAACTCCAGAAATC+AGG | + | Chr8:18135412-18135431 | MsG0880043046.01.T01:CDS | 40.0% | |
| GTGTCACATAGATGTTTGTG+AGG | + | Chr8:18136038-18136057 | MsG0880043046.01.T01:intron | 40.0% | |
| GTTCAGAAATCCAGGATACA+AGG | + | Chr8:18134375-18134394 | MsG0880043046.01.T01:CDS | 40.0% | |
| TAACTGAGTAGCAGAAAACC+AGG | - | Chr8:18134218-18134237 | None:intergenic | 40.0% | |
| TAGGCTAGGAGATGTAGTAA+AGG | + | Chr8:18135377-18135396 | MsG0880043046.01.T01:CDS | 40.0% | |
| TGGATCAAGTTAGCTAGTTC+AGG | - | Chr8:18134682-18134701 | None:intergenic | 40.0% | |
| TGGTGAATGTTGTACATGCT+TGG | + | Chr8:18135644-18135663 | MsG0880043046.01.T01:CDS | 40.0% | |
| TTCAAGACACCTAGGTGTAT+TGG | + | Chr8:18135807-18135826 | MsG0880043046.01.T01:CDS | 40.0% | |
| TTGCAGGCTTATACAGGTAT+AGG | + | Chr8:18135358-18135377 | MsG0880043046.01.T01:intron | 40.0% | |
| TTGTTGTGTTTGTGCAGTTC+TGG | + | Chr8:18133687-18133706 | MsG0880043046.01.T01:intron | 40.0% | |
| TTTCTCCTCAGCTAACAACT+CGG | - | Chr8:18135523-18135542 | None:intergenic | 40.0% | |
| TTTGTAGGACCAATACACCT+AGG | - | Chr8:18135819-18135838 | None:intergenic | 40.0% | |
| ! | AACATAGTGTCCTGGTTCTT+TGG | - | Chr8:18135583-18135602 | None:intergenic | 40.0% |
| ! | CAGGTAGAACCTTCTTTTGA+CGG | - | Chr8:18134199-18134218 | None:intergenic | 40.0% |
| ! | GACATAGCAGTTCTAATGGA+TGG | - | Chr8:18134640-18134659 | None:intergenic | 40.0% |
| ! | GCAGTTCTGGTACTAGTAAA+GGG | + | Chr8:18133700-18133719 | MsG0880043046.01.T01:intron | 40.0% |
| ! | GTTATCTTCTGGGAAATCAG+TGG | + | Chr8:18135600-18135619 | MsG0880043046.01.T01:CDS | 40.0% |
| ! | TGCAGTTCTGGTACTAGTAA+AGG | + | Chr8:18133699-18133718 | MsG0880043046.01.T01:intron | 40.0% |
| !! | TATGTTCTAGGGATCATGAC+AGG | + | Chr8:18134765-18134784 | MsG0880043046.01.T01:intron | 40.0% |
| !! | TGTCACACCTCCTTTTGTTT+GGG | - | Chr8:18134332-18134351 | None:intergenic | 40.0% |
| AACTGATGTGAAGATTGGCG+AGG | + | Chr8:18135008-18135027 | MsG0880043046.01.T01:CDS | 45.0% | |
| ACATCATCTGGACTGACACT+AGG | - | Chr8:18134424-18134443 | None:intergenic | 45.0% | |
| AGGATACAAGGATACCATGC+AGG | + | Chr8:18134387-18134406 | MsG0880043046.01.T01:CDS | 45.0% | |
| AGGGATCATGACAGGTTCAA+TGG | + | Chr8:18134773-18134792 | MsG0880043046.01.T01:intron | 45.0% | |
| ATCATCTGGACTGACACTAG+GGG | - | Chr8:18134422-18134441 | None:intergenic | 45.0% | |
| CATATCCGAGCTTCATAGAC+AGG | - | Chr8:18134031-18134050 | None:intergenic | 45.0% | |
| CATCATCTGGACTGACACTA+GGG | - | Chr8:18134423-18134442 | None:intergenic | 45.0% | |
| CCATACTCAGAAGTCACCAA+AGG | - | Chr8:18134839-18134858 | None:intergenic | 45.0% | |
| CGATACGATATTGACACGTG+TGG | + | Chr8:18133916-18133935 | MsG0880043046.01.T01:intron | 45.0% | |
| CGTCAAAAGAAGGTTCTACC+TGG | + | Chr8:18134197-18134216 | MsG0880043046.01.T01:intron | 45.0% | |
| CTCTACTGTCACCTCTTATG+TGG | + | Chr8:18134472-18134491 | MsG0880043046.01.T01:CDS | 45.0% | |
| GCTGCTGTAGATGAAGCTTA+AGG | - | Chr8:18134302-18134321 | None:intergenic | 45.0% | |
| GGATGCTGAGAATGTTCAGA+AGG | + | Chr8:18133386-18133405 | MsG0880043046.01.T01:CDS | 45.0% | |
| GGCTTATACAGGTATAGGCT+AGG | + | Chr8:18135363-18135382 | MsG0880043046.01.T01:intron | 45.0% | |
| GTGAAGGACTGTGAAGATGA+AGG | + | Chr8:18133305-18133324 | MsG0880043046.01.T01:exon | 45.0% | |
| GTTTCCCATCGAAAATGGCA+AGG | + | Chr8:18134276-18134295 | MsG0880043046.01.T01:CDS | 45.0% | |
| TCATAATAGGGTGCAGGTGA+AGG | + | Chr8:18133289-18133308 | MsG0880043046.01.T01:five_prime_UTR | 45.0% | |
| TCGAACAAGTCGGAGTTCAA+GGG | - | Chr8:18135727-18135746 | None:intergenic | 45.0% | |
| TGCATGGTATCCTTGTATCC+TGG | - | Chr8:18134388-18134407 | None:intergenic | 45.0% | |
| TTCACAAGGCTGTGTGCAAA+TGG | - | Chr8:18134535-18134554 | None:intergenic | 45.0% | |
| TTCAGAAGGAAACACTGAGG+AGG | + | Chr8:18133400-18133419 | MsG0880043046.01.T01:CDS | 45.0% | |
| TTCGAACAAGTCGGAGTTCA+AGG | - | Chr8:18135728-18135747 | None:intergenic | 45.0% | |
| ! | CCTTTGGTGACTTCTGAGTA+TGG | + | Chr8:18134836-18134855 | MsG0880043046.01.T01:intron | 45.0% |
| ! | CTGTCACACCTCCTTTTGTT+TGG | - | Chr8:18134333-18134352 | None:intergenic | 45.0% |
| ! | GAACTCCGACTTGTTCGAAA+AGG | + | Chr8:18135729-18135748 | MsG0880043046.01.T01:CDS | 45.0% |
| ! | GAAGCAAGTGATGAAGTGCT+TGG | + | Chr8:18135624-18135643 | MsG0880043046.01.T01:CDS | 45.0% |
| ! | GGAAACACTGAGGAGGATTT+TGG | + | Chr8:18133407-18133426 | MsG0880043046.01.T01:CDS | 45.0% |
| ! | TATTGGTGCAGTGTCGTTGT+CGG | + | Chr8:18134114-18134133 | MsG0880043046.01.T01:intron | 45.0% |
| ! | TTGCAGAGTTTAGGGCTGAA+TGG | + | Chr8:18133453-18133472 | MsG0880043046.01.T01:CDS | 45.0% |
| !! | AGGGGATTTTAATGCCTGCA+TGG | - | Chr8:18134404-18134423 | None:intergenic | 45.0% |
| !! | GTTGTTTTCACCAATCCTGC+AGG | + | Chr8:18135039-18135058 | MsG0880043046.01.T01:CDS | 45.0% |
| !! | TATGAGGCACCGTCAAAAGA+AGG | + | Chr8:18134187-18134206 | MsG0880043046.01.T01:intron | 45.0% |
| !! | TGTTGGATTAGGAGCATCTG+CGG | + | Chr8:18135779-18135798 | MsG0880043046.01.T01:CDS | 45.0% |
| !!! | AAGGCCTTGCCATTTTCGAT+GGG | - | Chr8:18134283-18134302 | None:intergenic | 45.0% |
| !!! | TAAGGCCTTGCCATTTTCGA+TGG | - | Chr8:18134284-18134303 | None:intergenic | 45.0% |
| AGCATCCGAGTTGTTAGCTG+AGG | + | Chr8:18135515-18135534 | MsG0880043046.01.T01:CDS | 50.0% | |
| CGGCTCAATTCAAGACACCT+AGG | + | Chr8:18135799-18135818 | MsG0880043046.01.T01:CDS | 50.0% | |
| CTATGCAGGAGAGGTTCCTT+TGG | + | Chr8:18134820-18134839 | MsG0880043046.01.T01:intron | 50.0% | |
| GTTGAGACACTATGCAGGAG+AGG | + | Chr8:18134811-18134830 | MsG0880043046.01.T01:intron | 50.0% | |
| TCTGAGTATGGTGCCTCTGA+AGG | + | Chr8:18134848-18134867 | MsG0880043046.01.T01:intron | 50.0% | |
| TTGAAGCAACCCACCTTCAG+AGG | - | Chr8:18134864-18134883 | None:intergenic | 50.0% | |
| ! | ACAAAAGGAGGTGTGACAGC+AGG | + | Chr8:18134334-18134353 | MsG0880043046.01.T01:CDS | 50.0% |
| ! | AGTATGGTGCCTCTGAAGGT+GGG | + | Chr8:18134852-18134871 | MsG0880043046.01.T01:intron | 50.0% |
| ! | GAAGATTGGCGAGGAGTATG+AGG | + | Chr8:18135017-18135036 | MsG0880043046.01.T01:CDS | 50.0% |
| ! | GCAAACTCAGGAGCCACTTT+AGG | - | Chr8:18134895-18134914 | None:intergenic | 50.0% |
| AAGGTGGAGCTTGAGCCAGT+TGG | + | Chr8:18134982-18135001 | MsG0880043046.01.T01:CDS | 55.0% | |
| ! | GAGTATGGTGCCTCTGAAGG+TGG | + | Chr8:18134851-18134870 | MsG0880043046.01.T01:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 18133175 | 18136164 | 18133175 | ID=MsG0880043046.01;Name=MsG0880043046.01 |
| Chr8 | mRNA | 18133175 | 18136164 | 18133175 | ID=MsG0880043046.01.T01;Parent=MsG0880043046.01;Name=MsG0880043046.01.T01;_AED=0.42;_eAED=0.42;_QI=146|0.5|0.6|1|0.75|0.6|5|238|493 |
| Chr8 | exon | 18133175 | 18133613 | 18133175 | ID=MsG0880043046.01.T01:exon:4733;Parent=MsG0880043046.01.T01 |
| Chr8 | exon | 18134273 | 18134728 | 18134273 | ID=MsG0880043046.01.T01:exon:4734;Parent=MsG0880043046.01.T01 |
| Chr8 | exon | 18134870 | 18135060 | 18134870 | ID=MsG0880043046.01.T01:exon:4735;Parent=MsG0880043046.01.T01 |
| Chr8 | exon | 18135364 | 18136027 | 18135364 | ID=MsG0880043046.01.T01:exon:4736;Parent=MsG0880043046.01.T01 |
| Chr8 | exon | 18136049 | 18136164 | 18136049 | ID=MsG0880043046.01.T01:exon:4737;Parent=MsG0880043046.01.T01 |
| Chr8 | five_prime_UTR | 18133175 | 18133320 | 18133175 | ID=MsG0880043046.01.T01:five_prime_utr;Parent=MsG0880043046.01.T01 |
| Chr8 | CDS | 18133321 | 18133613 | 18133321 | ID=MsG0880043046.01.T01:cds;Parent=MsG0880043046.01.T01 |
| Chr8 | CDS | 18134273 | 18134728 | 18134273 | ID=MsG0880043046.01.T01:cds;Parent=MsG0880043046.01.T01 |
| Chr8 | CDS | 18134870 | 18135060 | 18134870 | ID=MsG0880043046.01.T01:cds;Parent=MsG0880043046.01.T01 |
| Chr8 | CDS | 18135364 | 18135905 | 18135364 | ID=MsG0880043046.01.T01:cds;Parent=MsG0880043046.01.T01 |
| Chr8 | three_prime_UTR | 18135906 | 18136027 | 18135906 | ID=MsG0880043046.01.T01:three_prime_utr;Parent=MsG0880043046.01.T01 |
| Chr8 | three_prime_UTR | 18136049 | 18136164 | 18136049 | ID=MsG0880043046.01.T01:three_prime_utr;Parent=MsG0880043046.01.T01 |
| Gene Sequence |
| Protein sequence |
