AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580027970.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027970.01.T01 MTR_5g066230 63.492 882 102 12 1 684 1 860 0.0 1014
MsG0580027970.01.T01 MTR_5g066230 30.843 415 67 12 517 716 441 850 3.33e-24 109
MsG0580027970.01.T01 MTR_5g066230 30.022 453 108 14 559 812 441 883 1.11e-20 98.2
MsG0580027970.01.T01 MTR_5g066530 61.095 694 39 6 307 812 1 651 0.0 725
MsG0580027970.01.T01 MTR_5g066240 61.969 518 149 10 2 516 1 473 0.0 558
MsG0580027970.01.T01 MTR_3g100390 60.800 375 131 6 144 506 356 726 1.67e-139 438
MsG0580027970.01.T01 MTR_3g100390 60.800 375 131 6 144 506 359 729 2.48e-139 437
MsG0580027970.01.T01 MTR_2g009580 55.363 289 126 2 134 422 353 638 1.22e-98 328
MsG0580027970.01.T01 MTR_2g009580 55.363 289 126 2 134 422 387 672 2.20e-98 328
MsG0580027970.01.T01 MTR_8g064470 29.721 323 184 12 169 476 297 591 2.31e-34 140
MsG0580027970.01.T01 MTR_8g064470 34.568 162 91 6 169 328 297 445 5.35e-21 97.8
MsG0580027970.01.T01 MTR_8g064470 34.568 162 91 6 169 328 297 445 6.48e-21 97.4
MsG0580027970.01.T01 MTR_4g119970 25.429 350 212 15 43 384 161 469 1.63e-16 83.6
MsG0580027970.01.T01 MTR_2g436660 27.103 214 115 10 180 384 261 442 2.58e-16 82.8
MsG0580027970.01.T01 MTR_3g075090 26.699 206 125 7 196 400 91 271 1.70e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027970.01.T01 AT1G09730 51.421 387 164 5 159 526 373 754 9.00e-114 368
MsG0580027970.01.T01 AT1G09730 51.421 387 164 5 159 526 405 786 1.95e-113 368
MsG0580027970.01.T01 AT4G33620 52.788 269 121 3 156 423 281 544 1.29e-84 286
MsG0580027970.01.T01 AT1G60220 31.801 261 151 9 170 419 332 576 1.44e-32 134
MsG0580027970.01.T01 AT1G10570 33.585 265 143 10 170 419 186 432 9.75e-32 129
MsG0580027970.01.T01 AT1G10570 33.585 265 143 10 170 419 317 563 5.81e-31 129
MsG0580027970.01.T01 AT1G10570 33.585 265 143 10 170 419 316 562 5.87e-31 129
MsG0580027970.01.T01 AT4G15880 29.167 192 100 8 190 375 298 459 6.38e-20 94.4
MsG0580027970.01.T01 AT3G06910 27.461 193 103 9 190 375 310 472 8.01e-16 81.6
MsG0580027970.01.T01 AT4G00690 26.066 211 119 9 180 383 139 319 1.13e-14 76.6

Find 154 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTCCTCCTTCTAGGGTTT+TGG 0.193745 5:-72090133 MsG0580027970.01.T01:CDS
CATTTCAACATGTTCGTAAA+TGG 0.204655 5:-72087301 MsG0580027970.01.T01:CDS
CTTTCGAAAGCTGGCTGATA+TGG 0.231272 5:-72087360 MsG0580027970.01.T01:CDS
ATCTTACAATACTTGTAATA+TGG 0.240983 5:-72085872 MsG0580027970.01.T01:CDS
GGCGAAGTGGTTAATATTAA+TGG 0.242841 5:-72087105 MsG0580027970.01.T01:intron
TGAACCAGTTTCCTCCTTCT+AGG 0.272634 5:-72090140 MsG0580027970.01.T01:CDS
AAATGTATTCCCTCGTAATA+TGG 0.279291 5:-72088512 MsG0580027970.01.T01:CDS
GGCATAAGCCGCCTCTTCTT+TGG 0.294099 5:+72084899 None:intergenic
AGTTGGTGGTAACTTCAATT+TGG 0.294760 5:-72088813 MsG0580027970.01.T01:CDS
ACAGCATCTGGATCCCCTTT+TGG 0.297980 5:+72088203 None:intergenic
GTGTCATTGATGTATGTATT+TGG 0.314227 5:+72088146 None:intergenic
TTGCAGGAGTCTCTCACTTT+TGG 0.319621 5:-72089767 MsG0580027970.01.T01:intron
TACTTGTAATATGGTTCTTA+AGG 0.339876 5:-72085863 MsG0580027970.01.T01:CDS
ACTTACAAAGTTGGAACAAT+TGG 0.340942 5:+72086274 None:intergenic
TGGCATTAATTCATCCAGTT+TGG 0.343326 5:-72088551 MsG0580027970.01.T01:CDS
GAGGCATCGACTTCCCATTC+TGG 0.349420 5:-72085916 MsG0580027970.01.T01:CDS
GTCAGTGTCATTTATTCAAC+GGG 0.350712 5:-72085939 MsG0580027970.01.T01:CDS
CACAAACTTGTCTATCCAAA+AGG 0.356318 5:-72088218 MsG0580027970.01.T01:CDS
GTTTGCAAATTATCAGTTGC+AGG 0.359014 5:-72089783 MsG0580027970.01.T01:CDS
GCTACCATGTATATTGCATA+TGG 0.361060 5:-72086973 MsG0580027970.01.T01:CDS
TAGAGTTGGTGTCCCTTGAT+AGG 0.376140 5:+72085024 None:intergenic
GCAGATTTGCCGTCACAATC+AGG 0.387491 5:+72087323 None:intergenic
TGCAATATCAGACTCCAAAC+TGG 0.388848 5:+72088537 None:intergenic
TTACTTAGCGTAACAGCATC+TGG 0.392707 5:+72088191 None:intergenic
TAAGCAAGACATACCTCAAC+GGG 0.393152 5:+72086735 None:intergenic
TCCCACGAGTTTCTCAGTTC+CGG 0.396122 5:-72090069 MsG0580027970.01.T01:intron
ATTTGAAGAGGTAATATCAT+TGG 0.397257 5:+72090098 None:intergenic
CTCAGAGGGTTGAAATCAAA+TGG 0.405785 5:+72086302 None:intergenic
ACAGTTATTTGTCTGAAGAA+TGG 0.412320 5:-72086824 MsG0580027970.01.T01:intron
CCGTACGTTAATATTTGAAC+TGG 0.421646 5:-72086052 MsG0580027970.01.T01:CDS
TCTATCAAGGGACATCATAA+TGG 0.422280 5:-72086948 MsG0580027970.01.T01:CDS
TGCTGGTTATCACCATCGTC+AGG 0.422984 5:+72085997 None:intergenic
CAGAATATATTGACAACAAC+AGG 0.426234 5:-72085969 MsG0580027970.01.T01:CDS
GAGAGGAAGAATGATACATA+TGG 0.426271 5:-72086798 MsG0580027970.01.T01:CDS
TTCTATTCCCTGGCCAGAAT+GGG 0.426921 5:+72085903 None:intergenic
GAACCAGTTTCCTCCTTCTA+GGG 0.435655 5:-72090139 MsG0580027970.01.T01:CDS
TGAGTACTGGCAACAAGAAT+TGG 0.437010 5:-72085060 MsG0580027970.01.T01:CDS
AAACCCTAGAAGGAGGAAAC+TGG 0.440339 5:+72090136 None:intergenic
CTTCAATTTGGAGACCGATC+TGG 0.445381 5:-72088801 MsG0580027970.01.T01:CDS
AGAGATTCCAAAACCCTAGA+AGG 0.447367 5:+72090126 None:intergenic
GAAGTTCCCGATGCGGCTCT+TGG 0.452675 5:+72085829 None:intergenic
GACGAGGTCATTGATGTTGA+TGG 0.454665 5:-72088836 MsG0580027970.01.T01:CDS
TTTCTATTCCCTGGCCAGAA+TGG 0.454940 5:+72085902 None:intergenic
ATTGCATATGGATTCTATCA+AGG 0.462706 5:-72086961 MsG0580027970.01.T01:CDS
ACAAACTTGTCTATCCAAAA+GGG 0.462924 5:-72088217 MsG0580027970.01.T01:CDS
TTAATAGTGATTTGTTATCC+TGG 0.465013 5:-72087126 MsG0580027970.01.T01:CDS
GCCATGTTGGCAGACATCAC+TGG 0.466901 5:-72087152 MsG0580027970.01.T01:intron
GTTACTTACTTGAAGTTCAC+AGG 0.468600 5:+72087236 None:intergenic
ATCGACTTCCCATTCTGGCC+AGG 0.472305 5:-72085911 MsG0580027970.01.T01:CDS
ATGATCGTTGGTCAAAAGAT+TGG 0.477039 5:+72085164 None:intergenic
GCCTCCTTCGGTGGAAGTCA+TGG 0.478566 5:-72084879 MsG0580027970.01.T01:CDS
GGATAGACAAGTTTGTGAAA+AGG 0.479008 5:+72088224 None:intergenic
ATGGAAACATTTCTATTCCC+TGG 0.483194 5:+72085893 None:intergenic
TACGTTAATATTTGAACTGG+TGG 0.485813 5:-72086049 MsG0580027970.01.T01:CDS
GAGACCGATCTGGACACGTT+GGG 0.487778 5:-72088791 MsG0580027970.01.T01:CDS
ATATCAATGAGAGGATCAAC+CGG 0.488383 5:+72085103 None:intergenic
ATAAGCCGCCTCTTCTTTGG+AGG 0.492336 5:+72084902 None:intergenic
TATCCACACTTATCCTATCA+AGG 0.495098 5:-72085037 MsG0580027970.01.T01:CDS
CACTCGAATATGATGAGTAC+TGG 0.495135 5:-72085073 MsG0580027970.01.T01:CDS
GAGGCGGCTTATGCCTCCTT+CGG 0.495331 5:-72084891 MsG0580027970.01.T01:CDS
GTGAAAACCACTTACAAAGT+TGG 0.496585 5:+72086265 None:intergenic
CAATATATTCTGAGCAGTGC+TGG 0.499295 5:+72085980 None:intergenic
ATGTTCGCTGGTCAAAAGAT+TGG 0.500143 5:+72085668 None:intergenic
ATGTTCGCTGGTCAAAAGAT+TGG 0.500143 5:+72085731 None:intergenic
AAGAGGTAATATCATTGGAA+TGG 0.501251 5:+72090103 None:intergenic
TGGAAGTAGCTTGTTAGTCT+AGG 0.502063 5:+72088463 None:intergenic
TTTGAACCAAGAGCCGCATC+GGG 0.506018 5:-72085835 MsG0580027970.01.T01:CDS
ATGATTGCTGGTCAAAAGAT+TGG 0.512316 5:+72085794 None:intergenic
ATGATCGAGGGTCAAAAGAC+TGG 0.515581 5:+72085416 None:intergenic
GTCATTGATGTTGATGGAGT+TGG 0.516986 5:-72088830 MsG0580027970.01.T01:CDS
TGTGGACTGGTTTCCACCTA+CGG 0.519375 5:-72086100 MsG0580027970.01.T01:CDS
TCATTATCTAAAGCTCTTCG+TGG 0.523296 5:-72086333 MsG0580027970.01.T01:CDS
TAAGATAGAAGAGAAGCAAA+AGG 0.525918 5:-72087411 MsG0580027970.01.T01:CDS
TTAATATTAACCACTTCGCC+AGG 0.527512 5:+72087108 None:intergenic
GAAAACCATGGTTCACATGA+AGG 0.530457 5:-72086027 MsG0580027970.01.T01:CDS
ATCTTCGTTACAGTCAAGTC+AGG 0.533835 5:-72088696 MsG0580027970.01.T01:intron
ATTGACAACAACAGGATTGG+TGG 0.535711 5:-72085961 MsG0580027970.01.T01:CDS
TCCTTGACAGGTACCACAGC+AGG 0.535734 5:-72086387 MsG0580027970.01.T01:intron
TTGCATATGGATTCTATCAA+GGG 0.537748 5:-72086960 MsG0580027970.01.T01:CDS
ACATGATGCATTTGTAGAGT+TGG 0.541673 5:+72085010 None:intergenic
TATATTGACAACAACAGGAT+TGG 0.544673 5:-72085964 MsG0580027970.01.T01:CDS
AACAATTGGTTAGTCTCAGA+GGG 0.551951 5:+72086288 None:intergenic
GGTCAGTGTCATTTATTCAA+CGG 0.553002 5:-72085940 MsG0580027970.01.T01:CDS
CAGATTTGCCGTCACAATCA+GGG 0.553501 5:+72087324 None:intergenic
TGTCTGAAGAATGGAAAGAG+AGG 0.554930 5:-72086815 MsG0580027970.01.T01:CDS
ATGATCGCTGGTCAAAAGAC+TGG 0.559134 5:+72085227 None:intergenic
ATGATCGCTGGTCAAAAGAC+TGG 0.559134 5:+72085290 None:intergenic
ATGATCGCTGGTCAAAAGAC+TGG 0.559134 5:+72085479 None:intergenic
ATTGATGTTGATGGAGTTGG+TGG 0.561060 5:-72088827 MsG0580027970.01.T01:CDS
CAGGAAAACTCATTTGATTG+TGG 0.562524 5:-72086368 MsG0580027970.01.T01:CDS
GCGGCTTATGCCTCCTTCGG+TGG 0.564699 5:-72084888 MsG0580027970.01.T01:CDS
GCTGGAATCTCTCAATTCGA+TGG 0.566606 5:-72089825 MsG0580027970.01.T01:CDS
TAGAAGAGAAGCAAAAGGCT+AGG 0.566794 5:-72087406 MsG0580027970.01.T01:CDS
TCGACTTCCCATTCTGGCCA+GGG 0.568090 5:-72085910 MsG0580027970.01.T01:CDS
ATATTACAAGTATTGTAAGA+TGG 0.575254 5:+72085874 None:intergenic
TCATATGAAGTAATGATCGT+TGG 0.582348 5:+72085152 None:intergenic
ATTCCCTCGTAATATGGATG+TGG 0.583200 5:-72088506 MsG0580027970.01.T01:CDS
GTCTGAAAGACCTTGTGCAA+AGG 0.583698 5:-72086926 MsG0580027970.01.T01:intron
ACCGGAACTGAGAAACTCGT+GGG 0.587173 5:+72090068 None:intergenic
CCAGTTCAAATATTAACGTA+CGG 0.591408 5:+72086052 None:intergenic
GCTTCCCAACGTGTCCAGAT+CGG 0.592976 5:+72088787 None:intergenic
AGGAGGAAACTGGTTCATCA+TGG 0.593600 5:+72090146 None:intergenic
TTGCCGTCACAATCAGGGTG+GGG 0.594456 5:+72087329 None:intergenic
GCATATTTCAGACAAAGAGC+CGG 0.603949 5:-72087009 MsG0580027970.01.T01:intron
ATGAGAGACCTCCAAAGAAG+AGG 0.609720 5:-72084910 MsG0580027970.01.T01:CDS
CCTTCCACATCCATATTACG+AGG 0.611135 5:+72088502 None:intergenic
GCTGGTTATCACCATCGTCA+GGG 0.613048 5:+72085998 None:intergenic
TTTGCCGTCACAATCAGGGT+GGG 0.613309 5:+72087328 None:intergenic
CCTCGTAATATGGATGTGGA+AGG 0.615697 5:-72088502 MsG0580027970.01.T01:CDS
TTTGAACTGGTGGAAAACCA+TGG 0.618826 5:-72086039 MsG0580027970.01.T01:CDS
TCCATGACTTCCACCGAAGG+AGG 0.619807 5:+72084878 None:intergenic
TACCGGAACTGAGAAACTCG+TGG 0.619842 5:+72090067 None:intergenic
GAACAATTGGTTAGTCTCAG+AGG 0.620039 5:+72086287 None:intergenic
ATCCACACTTATCCTATCAA+GGG 0.620082 5:-72085036 MsG0580027970.01.T01:CDS
TTAGATGATGATAATGATCG+AGG 0.620098 5:+72085403 None:intergenic
GAATCCATATGCAATATACA+TGG 0.622872 5:+72086969 None:intergenic
GATTCCAAAACCCTAGAAGG+AGG 0.624471 5:+72090129 None:intergenic
AAGAGCCGGAAAAGTCACTT+AGG 0.625998 5:-72086995 MsG0580027970.01.T01:CDS
GGAGACCGATCTGGACACGT+TGG 0.628953 5:-72088792 MsG0580027970.01.T01:CDS
TTGAGATAAGCATCCGTAGG+TGG 0.629538 5:+72086087 None:intergenic
AAAAGCCTTCATGTGAACCA+TGG 0.631459 5:+72086022 None:intergenic
TAGATGATGATAATGATCGA+GGG 0.632188 5:+72085404 None:intergenic
TAGATGATGATAATGATCGC+TGG 0.636105 5:+72085215 None:intergenic
TAGATGATGATAATGATCGC+TGG 0.636105 5:+72085278 None:intergenic
TAGATGATGATAATGATCGC+TGG 0.636105 5:+72085341 None:intergenic
TAGATGATGATAATGATCGC+TGG 0.636105 5:+72085467 None:intergenic
TAGATGATGATAATGATCGC+TGG 0.636105 5:+72085530 None:intergenic
TAGATGATGATAATGATCGC+TGG 0.636105 5:+72085593 None:intergenic
CGCTTGAGATAAGCATCCGT+AGG 0.636755 5:+72086084 None:intergenic
AATCCCCACCCTGATTGTGA+CGG 0.637758 5:-72087332 MsG0580027970.01.T01:CDS
CAAACTTGTCTATCCAAAAG+GGG 0.646120 5:-72088216 MsG0580027970.01.T01:CDS
GATTCCATGACTTCCACCGA+AGG 0.647073 5:+72084875 None:intergenic
TGTTGAGAAATATCAATGAG+AGG 0.651346 5:+72085094 None:intergenic
ATGATCGCTGGTCAAAAGAG+TGG 0.651671 5:+72085353 None:intergenic
ATGATCGCTGGTCAAAAGAG+TGG 0.651671 5:+72085542 None:intergenic
ATGATCGCTGGTCAAAAGAG+TGG 0.651671 5:+72085605 None:intergenic
TATTCAAGAATCTTGATGAG+AGG 0.651763 5:+72086769 None:intergenic
CTGGTTATCACCATCGTCAG+GGG 0.651767 5:+72085999 None:intergenic
AGAGACCTCCAAAGAAGAGG+CGG 0.652837 5:-72084907 MsG0580027970.01.T01:CDS
GATTTGTTATCCTGGCGAAG+TGG 0.654014 5:-72087118 MsG0580027970.01.T01:CDS
TTAAGAAATACCTTTGCACA+AGG 0.654793 5:+72086916 None:intergenic
TAGATGATGATAATGTTCGC+TGG 0.655576 5:+72085656 None:intergenic
TAGATGATGATAATGTTCGC+TGG 0.655576 5:+72085719 None:intergenic
GTGTCATTTATTCAACGGGG+AGG 0.663555 5:-72085935 MsG0580027970.01.T01:CDS
CTTCCACATCCATATTACGA+GGG 0.670246 5:+72088503 None:intergenic
TCTCAGTGAAGTTCCCGATG+CGG 0.671660 5:+72085822 None:intergenic
GTCCCTTGATAGGATAAGTG+TGG 0.675915 5:+72085034 None:intergenic
ATTTGCCGTCACAATCAGGG+TGG 0.676872 5:+72087327 None:intergenic
GTAAGCAAGACATACCTCAA+CGG 0.678921 5:+72086734 None:intergenic
GTGGGATTGAGAATTTGAAG+AGG 0.686075 5:+72090086 None:intergenic
GCTGTGAAACAAGATACTAG+TGG 0.751401 5:-72088725 MsG0580027970.01.T01:CDS
TCAGTGTCATTTATTCAACG+GGG 0.770393 5:-72085938 MsG0580027970.01.T01:CDS
GTGAAACAAGATACTAGTGG+TGG 0.802443 5:-72088722 MsG0580027970.01.T01:CDS
AAGCAAGACATACCTCAACG+GGG 0.831878 5:+72086736 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAATTACAAATTGATT+TGG + Chr5:72085907-72085926 None:intergenic 10.0%
!! TTAAGTTATATTATTTCAAT+TGG - Chr5:72088818-72088837 MsG0580027970.01.T01:CDS 10.0%
!!! TATAAATCTTCTAATATTTT+TGG - Chr5:72086597-72086616 MsG0580027970.01.T01:intron 10.0%
!! AAGTTATTAACATTACAATT+TGG + Chr5:72087228-72087247 None:intergenic 15.0%
!! AATATAAACAAACAGTTATA+TGG - Chr5:72087499-72087518 MsG0580027970.01.T01:intron 15.0%
!! ATCTACTGTTAATAAAATAA+AGG + Chr5:72087376-72087395 None:intergenic 15.0%
!! ATTGTAATGTTAATAACTTA+TGG - Chr5:72087229-72087248 MsG0580027970.01.T01:intron 15.0%
!! GAATCATTAAAATAATTGAT+TGG - Chr5:72085825-72085844 MsG0580027970.01.T01:CDS 15.0%
!! TATAATTAACTAAAATCAGA+AGG - Chr5:72085872-72085891 MsG0580027970.01.T01:CDS 15.0%
!! TTGTAATGTTAATAACTTAT+GGG - Chr5:72087230-72087249 MsG0580027970.01.T01:intron 15.0%
!!! AAAAATCTTTTTGAAATCAA+TGG + Chr5:72086258-72086277 None:intergenic 15.0%
!!! AAAGTCTTATTTTATCATTT+TGG + Chr5:72087446-72087465 None:intergenic 15.0%
!!! AACAATTTTGCAATAAAAAT+AGG + Chr5:72088443-72088462 None:intergenic 15.0%
!!! AATATGCATTTATTTTTGTA+TGG + Chr5:72086036-72086055 None:intergenic 15.0%
!!! ATAACATTAATCTTGATTTT+TGG - Chr5:72090081-72090100 MsG0580027970.01.T01:CDS 15.0%
!!! TCATGTATATTGAAATTTTT+GGG + Chr5:72085003-72085022 None:intergenic 15.0%
!!! TTTTTAAATTACTTTCATCA+CGG - Chr5:72086622-72086641 MsG0580027970.01.T01:intron 15.0%
!! AAAAAAAACTCAAACTAACA+CGG + Chr5:72085333-72085352 None:intergenic 20.0%
!! AAAATAAGACTTTCAATATC+AGG - Chr5:72087453-72087472 MsG0580027970.01.T01:intron 20.0%
!! ACATTATAACTACTGAAAAA+TGG - Chr5:72087532-72087551 MsG0580027970.01.T01:intron 20.0%
!! AGAAAAAACTATTGAAAAAG+TGG + Chr5:72087637-72087656 None:intergenic 20.0%
!! ATCTTACAATACTTGTAATA+TGG - Chr5:72089143-72089162 MsG0580027970.01.T01:intron 20.0%
!! CAATAACAATATTAGAACTA+AGG + Chr5:72087305-72087324 None:intergenic 20.0%
!! CATTATAACTACTGAAAAAT+GGG - Chr5:72087533-72087552 MsG0580027970.01.T01:intron 20.0%
!! CTTAAAAAATATATATGGCT+AGG + Chr5:72088803-72088822 None:intergenic 20.0%
!! TAATAATCTACTCAAAATTG+TGG - Chr5:72085606-72085625 MsG0580027970.01.T01:CDS 20.0%
!! TCATCATTAAAAGAATCAAT+TGG - Chr5:72085566-72085585 MsG0580027970.01.T01:CDS 20.0%
!! TTGATAAAGATTCAAATAAG+AGG - Chr5:72085503-72085522 MsG0580027970.01.T01:CDS 20.0%
!!! ACTATTTTTCTGTTTAAGAT+GGG - Chr5:72085720-72085739 MsG0580027970.01.T01:CDS 20.0%
!!! ATATTACAAGTATTGTAAGA+TGG + Chr5:72089144-72089163 None:intergenic 20.0%
!!! ATTTGTATTGATGTTCTTAT+TGG - Chr5:72087828-72087847 MsG0580027970.01.T01:intron 20.0%
!!! CTGTTTAAAAATCTCAATTT+TGG - Chr5:72087566-72087585 MsG0580027970.01.T01:intron 20.0%
!!! CTTGAGTTGAAAAAATTTAA+GGG - Chr5:72085750-72085769 MsG0580027970.01.T01:CDS 20.0%
!!! GTCATGTATATTGAAATTTT+TGG + Chr5:72085004-72085023 None:intergenic 20.0%
!!! TACTATTTTTCTGTTTAAGA+TGG - Chr5:72085719-72085738 MsG0580027970.01.T01:CDS 20.0%
!!! TATTTTTTTGTACTTACTCT+TGG + Chr5:72086575-72086594 None:intergenic 20.0%
!!! TCTTGAGTTGAAAAAATTTA+AGG - Chr5:72085749-72085768 MsG0580027970.01.T01:CDS 20.0%
!!! TTCTTATTGGAATTCAATTT+TGG - Chr5:72087841-72087860 MsG0580027970.01.T01:intron 20.0%
! AACATCAGTAAATCAACAAT+AGG + Chr5:72085130-72085149 None:intergenic 25.0%
! AGAAAAATTCAACATATGTC+AGG + Chr5:72088888-72088907 None:intergenic 25.0%
! ATTTGAAGAGGTAATATCAT+TGG + Chr5:72084920-72084939 None:intergenic 25.0%
! GCTAACATATACTAACTTAA+GGG + Chr5:72087050-72087069 None:intergenic 25.0%
! GTAACCAACAAATAACTTAA+GGG - Chr5:72087261-72087280 MsG0580027970.01.T01:CDS 25.0%
! GTAACCAACAAATAACTTAA+GGG + Chr5:72087280-72087261 None:intergenic 25.0%
! TACTTGTAATATGGTTCTTA+AGG - Chr5:72089152-72089171 MsG0580027970.01.T01:intron 25.0%
! TAGAGATTTAGTTGTATTGT+AGG - Chr5:72086404-72086423 MsG0580027970.01.T01:intron 25.0%
! TCAAACTGAAATCTTCAATT+AGG + Chr5:72085934-72085953 None:intergenic 25.0%
! TCTAGGCTTAATTAATGATT+TGG - Chr5:72086981-72087000 MsG0580027970.01.T01:CDS 25.0%
! TGTAACCAACAAATAACTTA+AGG - Chr5:72087260-72087279 MsG0580027970.01.T01:CDS 25.0%
! TGTAACCAACAAATAACTTA+AGG + Chr5:72087279-72087260 None:intergenic 25.0%
! TGTCAATGTAACATTAGATT+TGG - Chr5:72085680-72085699 MsG0580027970.01.T01:CDS 25.0%
! TGTCATAATAGTTGACAAAA+TGG + Chr5:72088174-72088193 None:intergenic 25.0%
! TTAGATAATGAAGCAAAAAG+AGG + Chr5:72088673-72088692 None:intergenic 25.0%
! TTTCACACAAATTTCTATTG+CGG - Chr5:72085281-72085300 MsG0580027970.01.T01:CDS 25.0%
! TTTCTTATTGCTCAATGAAA+TGG - Chr5:72088356-72088375 MsG0580027970.01.T01:intron 25.0%
! TTTGACAGTAGAGATTTATT+TGG - Chr5:72087178-72087197 MsG0580027970.01.T01:intron 25.0%
!! AATATTGTTATTGTGAACCT+TGG - Chr5:72087312-72087331 MsG0580027970.01.T01:CDS 25.0%
!! ACATGACATGATTTTGTTAA+GGG + Chr5:72086011-72086030 None:intergenic 25.0%
!! ATGATCAATGTTTTCAATCA+TGG - Chr5:72085168-72085187 MsG0580027970.01.T01:CDS 25.0%
!! CAAAAAGATTTTTGATGAGT+TGG - Chr5:72086265-72086284 MsG0580027970.01.T01:intron 25.0%
!! CTTTTTCCAAAACGTTAAAT+AGG - Chr5:72087092-72087111 MsG0580027970.01.T01:intron 25.0%
!! TACAGATACTATCAATTTTC+CGG - Chr5:72089893-72089912 MsG0580027970.01.T01:intron 25.0%
!!! AGCACACATTTTTTTTTTCA+AGG + Chr5:72085484-72085503 None:intergenic 25.0%
!!! TCTGAGTTGATAAAATTGAA+TGG - Chr5:72085456-72085475 MsG0580027970.01.T01:CDS 25.0%
!!! TGAATCGAAAATAGTTTTAC+CGG + Chr5:72084968-72084987 None:intergenic 25.0%
!!! TTAATAGTGATTTGTTATCC+TGG - Chr5:72087889-72087908 MsG0580027970.01.T01:intron 25.0%
AAATCAACAATAGGATCATC+AGG + Chr5:72085121-72085140 None:intergenic 30.0%
AAATGTATTCCCTCGTAATA+TGG - Chr5:72086503-72086522 MsG0580027970.01.T01:intron 30.0%
AAGAGGTAATATCATTGGAA+TGG + Chr5:72084915-72084934 None:intergenic 30.0%
AATGTAAGAGGAATTGTGTT+TGG - Chr5:72085803-72085822 MsG0580027970.01.T01:CDS 30.0%
AATTGTTCCAACTTTGTAAG+TGG - Chr5:72088743-72088762 MsG0580027970.01.T01:CDS 30.0%
ACAAACTTGTCTATCCAAAA+GGG - Chr5:72086798-72086817 MsG0580027970.01.T01:CDS 30.0%
ACAAAGTATAGGCCAAATAA+TGG + Chr5:72088494-72088513 None:intergenic 30.0%
ACAGTTATTTGTCTGAAGAA+TGG - Chr5:72088191-72088210 MsG0580027970.01.T01:CDS 30.0%
ACCATACAATGTTTGCATTT+CGG + Chr5:72086730-72086749 None:intergenic 30.0%
ACTTACAAAGTTGGAACAAT+TGG + Chr5:72088744-72088763 None:intergenic 30.0%
AGAAATGAATTAGTGACTAG+TGG - Chr5:72085956-72085975 MsG0580027970.01.T01:CDS 30.0%
AGAGAAGGAAATTTAATGTG+TGG + Chr5:72088133-72088152 None:intergenic 30.0%
ATGATTCCAAATACAATGCT+AGG + Chr5:72085550-72085569 None:intergenic 30.0%
ATGGCTAGGAACAAAATAAT+TGG + Chr5:72088789-72088808 None:intergenic 30.0%
ATTGCATATGGATTCTATCA+AGG - Chr5:72088054-72088073 MsG0580027970.01.T01:intron 30.0%
ATTTGTGAGTTTACATCCTA+AGG - Chr5:72086381-72086400 MsG0580027970.01.T01:intron 30.0%
CAAAGTATAGGCCAAATAAT+GGG + Chr5:72088493-72088512 None:intergenic 30.0%
CAGAATATATTGACAACAAC+AGG - Chr5:72089046-72089065 MsG0580027970.01.T01:intron 30.0%
CATTTCAACATGTTCGTAAA+TGG - Chr5:72087714-72087733 MsG0580027970.01.T01:intron 30.0%
CCAGTTCAAATATTAACGTA+CGG + Chr5:72088966-72088985 None:intergenic 30.0%
CTAAGGCTTAATTAATGATG+TGG + Chr5:72087288-72087307 None:intergenic 30.0%
CTGATAAGTTAAAGAAGAGA+AGG + Chr5:72088148-72088167 None:intergenic 30.0%
GAATCAATTGGAATTTGATG+TGG - Chr5:72085578-72085597 MsG0580027970.01.T01:CDS 30.0%
GAATCCATATGCAATATACA+TGG + Chr5:72088049-72088068 None:intergenic 30.0%
GGCTAACATATACTAACTTA+AGG + Chr5:72087051-72087070 None:intergenic 30.0%
GGTTCATATCTTTCAACTTA+TGG - Chr5:72085977-72085996 MsG0580027970.01.T01:CDS 30.0%
GTAGAGATTTATTTGGTTGA+CGG - Chr5:72087185-72087204 MsG0580027970.01.T01:intron 30.0%
GTTACATTAACGTTACCATT+TGG - Chr5:72087023-72087042 MsG0580027970.01.T01:intron 30.0%
TAAGATAGAAGAGAAGCAAA+AGG - Chr5:72087604-72087623 MsG0580027970.01.T01:intron 30.0%
TACAACTAAATCTCTACCTT+AGG + Chr5:72086400-72086419 None:intergenic 30.0%
TACGTTAATATTTGAACTGG+TGG - Chr5:72088966-72088985 MsG0580027970.01.T01:intron 30.0%
TATATTGACAACAACAGGAT+TGG - Chr5:72089051-72089070 MsG0580027970.01.T01:intron 30.0%
TATTCAAGAATCTTGATGAG+AGG + Chr5:72088249-72088268 None:intergenic 30.0%
TCATATGAAGTAATGATCGT+TGG + Chr5:72089866-72089885 None:intergenic 30.0%
TGATTCCAAATACAATGCTA+GGG + Chr5:72085549-72085568 None:intergenic 30.0%
TGTTGAGAAATATCAATGAG+AGG + Chr5:72089924-72089943 None:intergenic 30.0%
TTAAGAAATACCTTTGCACA+AGG + Chr5:72088102-72088121 None:intergenic 30.0%
TTCAAAAAGCGACAAAGTAT+AGG + Chr5:72088505-72088524 None:intergenic 30.0%
TTGACGGAAGATAACTTAAA+GGG - Chr5:72087201-72087220 MsG0580027970.01.T01:intron 30.0%
TTGCATATGGATTCTATCAA+GGG - Chr5:72088055-72088074 MsG0580027970.01.T01:intron 30.0%
! AAAATTGATTCCAAGTCACT+GGG - Chr5:72088399-72088418 MsG0580027970.01.T01:intron 30.0%
! AACTTTGTAAGTGGTTTTCA+CGG - Chr5:72088752-72088771 MsG0580027970.01.T01:CDS 30.0%
! ATTCTACAGAGTTCTCTTTT+TGG - Chr5:72086692-72086711 MsG0580027970.01.T01:intron 30.0%
! CACATGACATGATTTTGTTA+AGG + Chr5:72086012-72086031 None:intergenic 30.0%
! GAATTTGAAGTACTAAAACG+TGG + Chr5:72086132-72086151 None:intergenic 30.0%
! GTGTCATTGATGTATGTATT+TGG + Chr5:72086872-72086891 None:intergenic 30.0%
! TAGATGATGATAATGATCGA+GGG + Chr5:72089614-72089633 None:intergenic 30.0%
! TATGTCATTCTTTTTGCAGA+CGG - Chr5:72086434-72086453 MsG0580027970.01.T01:intron 30.0%
! TTAGATGATGATAATGATCG+AGG + Chr5:72089426-72089445 None:intergenic 30.0%
! TTCTACAGAGTTCTCTTTTT+GGG - Chr5:72086693-72086712 MsG0580027970.01.T01:intron 30.0%
!!! TAGTTTTTTCTTTCGAAAGC+TGG - Chr5:72087646-72087665 MsG0580027970.01.T01:intron 30.0%
!!! TGAATTTTTCTAGCTCAATG+TGG - Chr5:72088897-72088916 MsG0580027970.01.T01:intron 30.0%
!!! TGGATTTCAGTTTTATTTGC+TGG - Chr5:72088376-72088395 MsG0580027970.01.T01:intron 30.0%
AAAATAGGCAACTTTCGTAG+TGG + Chr5:72088428-72088447 None:intergenic 35.0%
ACATGATGCATTTGTAGAGT+TGG + Chr5:72090008-72090027 None:intergenic 35.0%
ACATTGACATCTCTTGCTTA+GGG + Chr5:72085669-72085688 None:intergenic 35.0%
AGGTATCTTATGTTCATCAG+GGG - Chr5:72086339-72086358 MsG0580027970.01.T01:CDS 35.0%
ATATCAATGAGAGGATCAAC+CGG + Chr5:72089915-72089934 None:intergenic 35.0%
ATCCACACTTATCCTATCAA+GGG - Chr5:72089979-72089998 MsG0580027970.01.T01:intron 35.0%
ATGATCGTTGGTCAAAAGAT+TGG + Chr5:72089854-72089873 None:intergenic 35.0%
ATGATTGCTGGTCAAAAGAT+TGG + Chr5:72089224-72089243 None:intergenic 35.0%
ATGGAAACATTTCTATTCCC+TGG + Chr5:72089125-72089144 None:intergenic 35.0%
ATTACTTTCATCACGGTTAG+AGG - Chr5:72086629-72086648 MsG0580027970.01.T01:intron 35.0%
CAAACTTGTCTATCCAAAAG+GGG - Chr5:72086799-72086818 MsG0580027970.01.T01:CDS 35.0%
CACAAACTTGTCTATCCAAA+AGG - Chr5:72086797-72086816 MsG0580027970.01.T01:CDS 35.0%
CAGGAAAACTCATTTGATTG+TGG - Chr5:72088647-72088666 MsG0580027970.01.T01:intron 35.0%
CAGGTATCTTATGTTCATCA+GGG - Chr5:72086338-72086357 MsG0580027970.01.T01:CDS 35.0%
CATGAAAACAAAAGTGAGCT+TGG - Chr5:72085776-72085795 MsG0580027970.01.T01:CDS 35.0%
CCGTACGTTAATATTTGAAC+TGG - Chr5:72088963-72088982 MsG0580027970.01.T01:intron 35.0%
CCTCGACAATAAAAATCAAG+AGG + Chr5:72086078-72086097 None:intergenic 35.0%
GAAATGCAAACATTGTATGG+TGG - Chr5:72086729-72086748 MsG0580027970.01.T01:intron 35.0%
GAGAGGAAGAATGATACATA+TGG - Chr5:72088217-72088236 MsG0580027970.01.T01:CDS 35.0%
GCTACCATGTATATTGCATA+TGG - Chr5:72088042-72088061 MsG0580027970.01.T01:intron 35.0%
GGATAGACAAGTTTGTGAAA+AGG + Chr5:72086794-72086813 None:intergenic 35.0%
GGCGAAGTGGTTAATATTAA+TGG - Chr5:72087910-72087929 MsG0580027970.01.T01:intron 35.0%
GTGAAAACCACTTACAAAGT+TGG + Chr5:72088753-72088772 None:intergenic 35.0%
GTTAAATAGGCACATGTGAA+CGG - Chr5:72087105-72087124 MsG0580027970.01.T01:intron 35.0%
GTTACTTACTTGAAGTTCAC+AGG + Chr5:72087782-72087801 None:intergenic 35.0%
GTTGACGGAAGATAACTTAA+AGG - Chr5:72087200-72087219 MsG0580027970.01.T01:intron 35.0%
GTTTGCAAATTATCAGTTGC+AGG - Chr5:72085232-72085251 MsG0580027970.01.T01:CDS 35.0%
TAACTCCCTAGTGATTCATA+TGG - Chr5:72088844-72088863 MsG0580027970.01.T01:intron 35.0%
TACATTGACATCTCTTGCTT+AGG + Chr5:72085670-72085689 None:intergenic 35.0%
TACTAACTTAAGGGACCAAA+TGG + Chr5:72087041-72087060 None:intergenic 35.0%
TATCCACACTTATCCTATCA+AGG - Chr5:72089978-72089997 MsG0580027970.01.T01:intron 35.0%
TCAGGTATCTTATGTTCATC+AGG - Chr5:72086337-72086356 MsG0580027970.01.T01:CDS 35.0%
TCCGAAATGCAAACATTGTA+TGG - Chr5:72086726-72086745 MsG0580027970.01.T01:intron 35.0%
TCTATCAAGGGACATCATAA+TGG - Chr5:72088067-72088086 MsG0580027970.01.T01:intron 35.0%
TGAAACCCTAGCATTGTATT+TGG - Chr5:72085541-72085560 MsG0580027970.01.T01:CDS 35.0%
TGAATGCAAGTCCCATTATT+TGG - Chr5:72088479-72088498 MsG0580027970.01.T01:CDS 35.0%
TGGCATTAATTCATCCAGTT+TGG - Chr5:72086464-72086483 MsG0580027970.01.T01:intron 35.0%
TGGTCCCTTAAGTTATTTGT+TGG - Chr5:72087001-72087020 MsG0580027970.01.T01:CDS 35.0%
TGGTCCCTTAAGTTATTTGT+TGG + Chr5:72087020-72087001 None:intergenic 35.0%
TTAATATTAACCACTTCGCC+AGG + Chr5:72087910-72087929 None:intergenic 35.0%
! ACTGATGGTGAGGATTTATT+TGG + Chr5:72087072-72087091 None:intergenic 35.0%
! ATTTATTTCTCGCCTATCTC+TGG - Chr5:72088524-72088543 MsG0580027970.01.T01:CDS 35.0%
! CATGTGCCTATTTAACGTTT+TGG + Chr5:72087101-72087120 None:intergenic 35.0%
! CCTCTTGATTTTTATTGTCG+AGG - Chr5:72086075-72086094 MsG0580027970.01.T01:CDS 35.0%
! GAAAATTGATTCCAAGTCAC+TGG - Chr5:72088398-72088417 MsG0580027970.01.T01:intron 35.0%
! TAGATGATGATAATGATCGC+TGG + Chr5:72089425-72089444 None:intergenic 35.0%
! TAGATGATGATAATGTTCGC+TGG + Chr5:72089299-72089318 None:intergenic 35.0%
! TCAATGTTTTCAATCATGGC+TGG - Chr5:72085172-72085191 MsG0580027970.01.T01:CDS 35.0%
! TCATTATCTAAAGCTCTTCG+TGG - Chr5:72088682-72088701 MsG0580027970.01.T01:intron 35.0%
!! AACAATTGGTTAGTCTCAGA+GGG + Chr5:72088730-72088749 None:intergenic 35.0%
!! AGTTGGTGGTAACTTCAATT+TGG - Chr5:72086202-72086221 MsG0580027970.01.T01:intron 35.0%
!! CTTTGCTTGCATTTAGTTCT+AGG - Chr5:72086964-72086983 MsG0580027970.01.T01:CDS 35.0%
!! GAATTCAATTTTGGCCATGT+TGG - Chr5:72087850-72087869 MsG0580027970.01.T01:intron 35.0%
!! GGTCAGTGTCATTTATTCAA+CGG - Chr5:72089075-72089094 MsG0580027970.01.T01:intron 35.0%
!! GTCAGTGTCATTTATTCAAC+GGG - Chr5:72089076-72089095 MsG0580027970.01.T01:intron 35.0%
!! TCAGTGTCATTTATTCAACG+GGG - Chr5:72089077-72089096 MsG0580027970.01.T01:intron 35.0%
!! TCATGTCTGAAACAGTTTTC+AGG - Chr5:72086766-72086785 MsG0580027970.01.T01:CDS 35.0%
!! TTGATGATGATGATGATTGC+TGG + Chr5:72089236-72089255 None:intergenic 35.0%
!!! ACGTTTTGGAAAAAGACTGA+TGG + Chr5:72087087-72087106 None:intergenic 35.0%
!!! CAAGCTCACTTTTGTTTTCA+TGG + Chr5:72085778-72085797 None:intergenic 35.0%
AAAAGCCTTCATGTGAACCA+TGG + Chr5:72088996-72089015 None:intergenic 40.0%
AACCGTTAAGCCAATGTCTA+AGG + Chr5:72087159-72087178 None:intergenic 40.0%
ACTAATCATCAGCCAGAGAT+AGG + Chr5:72088539-72088558 None:intergenic 40.0%
AGAGATTCCAAAACCCTAGA+AGG + Chr5:72084892-72084911 None:intergenic 40.0%
ATCTTCGTTACAGTCAAGTC+AGG - Chr5:72086319-72086338 MsG0580027970.01.T01:CDS 40.0%
ATGTTCGCTGGTCAAAAGAT+TGG + Chr5:72089287-72089306 None:intergenic 40.0%
ATTCCCTCGTAATATGGATG+TGG - Chr5:72086509-72086528 MsG0580027970.01.T01:intron 40.0%
ATTGACAACAACAGGATTGG+TGG - Chr5:72089054-72089073 MsG0580027970.01.T01:intron 40.0%
CAATATATTCTGAGCAGTGC+TGG + Chr5:72089038-72089057 None:intergenic 40.0%
CACTCGAATATGATGAGTAC+TGG - Chr5:72089942-72089961 MsG0580027970.01.T01:intron 40.0%
CATTGTATGGTGGCTAATTC+TGG - Chr5:72086739-72086758 MsG0580027970.01.T01:intron 40.0%
CTCAGAGGGTTGAAATCAAA+TGG + Chr5:72088716-72088735 None:intergenic 40.0%
CTTCCACATCCATATTACGA+GGG + Chr5:72086515-72086534 None:intergenic 40.0%
GAAAACCATGGTTCACATGA+AGG - Chr5:72088988-72089007 MsG0580027970.01.T01:intron 40.0%
GAGAAAAGCTGTATGTTCCA+AGG + Chr5:72087332-72087351 None:intergenic 40.0%
GAGCTTGGTAGAAATGTAAG+AGG - Chr5:72085791-72085810 MsG0580027970.01.T01:CDS 40.0%
GCATATTTCAGACAAAGAGC+CGG - Chr5:72088006-72088025 MsG0580027970.01.T01:intron 40.0%
GCTGTGAAACAAGATACTAG+TGG - Chr5:72086290-72086309 MsG0580027970.01.T01:CDS 40.0%
GTAAGCAAGACATACCTCAA+CGG + Chr5:72088284-72088303 None:intergenic 40.0%
GTGAAACAAGATACTAGTGG+TGG - Chr5:72086293-72086312 MsG0580027970.01.T01:CDS 40.0%
GTGGGATTGAGAATTTGAAG+AGG + Chr5:72084932-72084951 None:intergenic 40.0%
TAAGCAAGACATACCTCAAC+GGG + Chr5:72088283-72088302 None:intergenic 40.0%
TAGAAGAGAAGCAAAAGGCT+AGG - Chr5:72087609-72087628 MsG0580027970.01.T01:intron 40.0%
TGCAATATCAGACTCCAAAC+TGG + Chr5:72086481-72086500 None:intergenic 40.0%
TGTCTGAAGAATGGAAAGAG+AGG - Chr5:72088200-72088219 MsG0580027970.01.T01:CDS 40.0%
TGTGTATCCACCTTAGACAT+TGG - Chr5:72087146-72087165 MsG0580027970.01.T01:intron 40.0%
TTACTTAGCGTAACAGCATC+TGG + Chr5:72086827-72086846 None:intergenic 40.0%
TTTGAACTGGTGGAAAACCA+TGG - Chr5:72088976-72088995 MsG0580027970.01.T01:intron 40.0%
! ATTGATGTTGATGGAGTTGG+TGG - Chr5:72086188-72086207 MsG0580027970.01.T01:intron 40.0%
! GTCATTGATGTTGATGGAGT+TGG - Chr5:72086185-72086204 MsG0580027970.01.T01:intron 40.0%
! TCAAATGAGTTTTCCTGCTG+TGG + Chr5:72088644-72088663 None:intergenic 40.0%
! TTGGAAAAAGACTGATGGTG+AGG + Chr5:72087082-72087101 None:intergenic 40.0%
! TTTTTGCAGACGGAATCAGT+TGG - Chr5:72086444-72086463 MsG0580027970.01.T01:intron 40.0%
!! CACCTTAGACATTGGCTTAA+CGG - Chr5:72087154-72087173 MsG0580027970.01.T01:intron 40.0%
!! GAACAATTGGTTAGTCTCAG+AGG + Chr5:72088731-72088750 None:intergenic 40.0%
!! TGAGTACTGGCAACAAGAAT+TGG - Chr5:72089955-72089974 MsG0580027970.01.T01:intron 40.0%
!! TGGAAGTAGCTTGTTAGTCT+AGG + Chr5:72086555-72086574 None:intergenic 40.0%
!!! GAGTTCTCTTTTTGGGACAT+AGG - Chr5:72086700-72086719 MsG0580027970.01.T01:intron 40.0%
!!! TTTTCTAGCTCAATGTGGAC+TGG - Chr5:72088902-72088921 MsG0580027970.01.T01:intron 40.0%
AAACCCTAGAAGGAGGAAAC+TGG + Chr5:72084882-72084901 None:intergenic 45.0%
AAGAGCCGGAAAAGTCACTT+AGG - Chr5:72088020-72088039 MsG0580027970.01.T01:intron 45.0%
AAGCAAGACATACCTCAACG+GGG + Chr5:72088282-72088301 None:intergenic 45.0%
ACTTTCATCACGGTTAGAGG+TGG - Chr5:72086632-72086651 MsG0580027970.01.T01:intron 45.0%
ATGAGAGACCTCCAAAGAAG+AGG - Chr5:72090105-72090124 MsG0580027970.01.T01:CDS 45.0%
ATGATCGAGGGTCAAAAGAC+TGG + Chr5:72089602-72089621 None:intergenic 45.0%
ATGATCGCTGGTCAAAAGAC+TGG + Chr5:72089539-72089558 None:intergenic 45.0%
ATGATCGCTGGTCAAAAGAG+TGG + Chr5:72089413-72089432 None:intergenic 45.0%
CAGATTTGCCGTCACAATCA+GGG + Chr5:72087694-72087713 None:intergenic 45.0%
CCTCGTAATATGGATGTGGA+AGG - Chr5:72086513-72086532 MsG0580027970.01.T01:intron 45.0%
CCTTCCACATCCATATTACG+AGG + Chr5:72086516-72086535 None:intergenic 45.0%
CGTTAAGCCAATGTCTAAGG+TGG + Chr5:72087156-72087175 None:intergenic 45.0%
CTTCAATTTGGAGACCGATC+TGG - Chr5:72086214-72086233 MsG0580027970.01.T01:intron 45.0%
CTTTCGAAAGCTGGCTGATA+TGG - Chr5:72087655-72087674 MsG0580027970.01.T01:intron 45.0%
GAACCAGTTTCCTCCTTCTA+GGG - Chr5:72084876-72084895 MsG0580027970.01.T01:CDS 45.0%
GACGAGGTCATTGATGTTGA+TGG - Chr5:72086179-72086198 MsG0580027970.01.T01:intron 45.0%
GATTCCAAAACCCTAGAAGG+AGG + Chr5:72084889-72084908 None:intergenic 45.0%
GCTGGAATCTCTCAATTCGA+TGG - Chr5:72085190-72085209 MsG0580027970.01.T01:CDS 45.0%
GTCCCTTGATAGGATAAGTG+TGG + Chr5:72089984-72090003 None:intergenic 45.0%
GTCTGAAAGACCTTGTGCAA+AGG - Chr5:72088089-72088108 MsG0580027970.01.T01:intron 45.0%
TGAACCAGTTTCCTCCTTCT+AGG - Chr5:72084875-72084894 MsG0580027970.01.T01:CDS 45.0%
TGTGACTGAATGTCCTTGAC+AGG - Chr5:72088616-72088635 MsG0580027970.01.T01:intron 45.0%
TTCTATTCCCTGGCCAGAAT+GGG + Chr5:72089115-72089134 None:intergenic 45.0%
TTGAGATAAGCATCCGTAGG+TGG + Chr5:72088931-72088950 None:intergenic 45.0%
TTTCTATTCCCTGGCCAGAA+TGG + Chr5:72089116-72089135 None:intergenic 45.0%
! CTTTTCTTGTCATGCAGACG+AGG - Chr5:72086163-72086182 MsG0580027970.01.T01:intron 45.0%
! GGTAGCCTAAGTGACTTTTC+CGG + Chr5:72088028-72088047 None:intergenic 45.0%
! TATGCATTTTCTCCCCGTTG+AGG - Chr5:72088267-72088286 MsG0580027970.01.T01:intron 45.0%
! TTGCAGGAGTCTCTCACTTT+TGG - Chr5:72085248-72085267 MsG0580027970.01.T01:CDS 45.0%
! TTTTGAACCAAGAGCCGCAT+CGG - Chr5:72089179-72089198 MsG0580027970.01.T01:intron 45.0%
!! GATTTGTTATCCTGGCGAAG+TGG - Chr5:72087897-72087916 MsG0580027970.01.T01:intron 45.0%
!! GTGTCATTTATTCAACGGGG+AGG - Chr5:72089080-72089099 MsG0580027970.01.T01:intron 45.0%
!! TAGAGTTGGTGTCCCTTGAT+AGG + Chr5:72089994-72090013 None:intergenic 45.0%
!!! GTTTCCTCCTTCTAGGGTTT+TGG - Chr5:72084882-72084901 MsG0580027970.01.T01:CDS 45.0%
!! TATAACTTAAAAAATATATA+TGG + Chr5:72088808-72088827 None:intergenic 5.0%
!!! ATTTTTAAAATTTTAAAGTA+TGG - Chr5:72085631-72085650 MsG0580027970.01.T01:CDS 5.0%
AATCCCCACCCTGATTGTGA+CGG - Chr5:72087683-72087702 MsG0580027970.01.T01:intron 50.0%
ACCGGAACTGAGAAACTCGT+GGG + Chr5:72084950-72084969 None:intergenic 50.0%
AGAGACCTCCAAAGAAGAGG+CGG - Chr5:72090108-72090127 MsG0580027970.01.T01:CDS 50.0%
ATAAGCCGCCTCTTCTTTGG+AGG + Chr5:72090116-72090135 None:intergenic 50.0%
ATTTGCCGTCACAATCAGGG+TGG + Chr5:72087691-72087710 None:intergenic 50.0%
CGCTTGAGATAAGCATCCGT+AGG + Chr5:72088934-72088953 None:intergenic 50.0%
CTGGTTATCACCATCGTCAG+GGG + Chr5:72089019-72089038 None:intergenic 50.0%
GATTCCATGACTTCCACCGA+AGG + Chr5:72090143-72090162 None:intergenic 50.0%
GCAGATTTGCCGTCACAATC+AGG + Chr5:72087695-72087714 None:intergenic 50.0%
GCTGGTTATCACCATCGTCA+GGG + Chr5:72089020-72089039 None:intergenic 50.0%
GTAGTGGTTTCCCAGTGACT+TGG + Chr5:72088412-72088431 None:intergenic 50.0%
TACCGGAACTGAGAAACTCG+TGG + Chr5:72084951-72084970 None:intergenic 50.0%
TCCAGTGATGTCTGCCAACA+TGG + Chr5:72087867-72087886 None:intergenic 50.0%
TCCCACGAGTTTCTCAGTTC+CGG - Chr5:72084946-72084965 MsG0580027970.01.T01:CDS 50.0%
TCTCAGTGAAGTTCCCGATG+CGG + Chr5:72089196-72089215 None:intergenic 50.0%
TTTGAACCAAGAGCCGCATC+GGG - Chr5:72089180-72089199 MsG0580027970.01.T01:intron 50.0%
TTTGCCGTCACAATCAGGGT+GGG + Chr5:72087690-72087709 None:intergenic 50.0%
! ACAGCATCTGGATCCCCTTT+TGG + Chr5:72086815-72086834 None:intergenic 50.0%
! TGCTGGTTATCACCATCGTC+AGG + Chr5:72089021-72089040 None:intergenic 50.0%
!! TGTGGACTGGTTTCCACCTA+CGG - Chr5:72088915-72088934 MsG0580027970.01.T01:intron 50.0%
GAGACCGATCTGGACACGTT+GGG - Chr5:72086224-72086243 MsG0580027970.01.T01:intron 55.0%
GCCATGTTGGCAGACATCAC+TGG - Chr5:72087863-72087882 MsG0580027970.01.T01:intron 55.0%
GCTTCCCAACGTGTCCAGAT+CGG + Chr5:72086231-72086250 None:intergenic 55.0%
GGCATAAGCCGCCTCTTCTT+TGG + Chr5:72090119-72090138 None:intergenic 55.0%
TCCATGACTTCCACCGAAGG+AGG + Chr5:72090140-72090159 None:intergenic 55.0%
TCCTGCTGTGGTACCTGTCA+AGG + Chr5:72088632-72088651 None:intergenic 55.0%
TCCTTGACAGGTACCACAGC+AGG - Chr5:72088628-72088647 MsG0580027970.01.T01:intron 55.0%
TCGACTTCCCATTCTGGCCA+GGG - Chr5:72089105-72089124 MsG0580027970.01.T01:intron 55.0%
TTGCCGTCACAATCAGGGTG+GGG + Chr5:72087689-72087708 None:intergenic 55.0%
! ATCGACTTCCCATTCTGGCC+AGG - Chr5:72089104-72089123 MsG0580027970.01.T01:intron 55.0%
! GAAGGCTTTTCCCCTGACGA+TGG - Chr5:72089006-72089025 MsG0580027970.01.T01:intron 55.0%
!! GAGGCATCGACTTCCCATTC+TGG - Chr5:72089099-72089118 MsG0580027970.01.T01:intron 55.0%
GAAGTTCCCGATGCGGCTCT+TGG + Chr5:72089189-72089208 None:intergenic 60.0%
GAGGCGGCTTATGCCTCCTT+CGG - Chr5:72090124-72090143 MsG0580027970.01.T01:CDS 60.0%
GCCTCCTTCGGTGGAAGTCA+TGG - Chr5:72090136-72090155 MsG0580027970.01.T01:CDS 60.0%
GGAGACCGATCTGGACACGT+TGG - Chr5:72086223-72086242 MsG0580027970.01.T01:intron 60.0%
GCGGCTTATGCCTCCTTCGG+TGG - Chr5:72090127-72090146 MsG0580027970.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 72084871 72090166 72084871 ID=MsG0580027970.01;Name=MsG0580027970.01
Chr5 mRNA 72084871 72090166 72084871 ID=MsG0580027970.01.T01;Parent=MsG0580027970.01;Name=MsG0580027970.01.T01;_AED=0.27;_eAED=0.35;_QI=0|0|0|0.81|1|1|11|0|812
Chr5 exon 72090070 72090166 72090070 ID=MsG0580027970.01.T01:exon:23465;Parent=MsG0580027970.01.T01
Chr5 exon 72089768 72089869 72089768 ID=MsG0580027970.01.T01:exon:23464;Parent=MsG0580027970.01.T01
Chr5 exon 72088697 72088857 72088697 ID=MsG0580027970.01.T01:exon:23463;Parent=MsG0580027970.01.T01
Chr5 exon 72088460 72088584 72088460 ID=MsG0580027970.01.T01:exon:23462;Parent=MsG0580027970.01.T01
Chr5 exon 72088125 72088256 72088125 ID=MsG0580027970.01.T01:exon:23461;Parent=MsG0580027970.01.T01
Chr5 exon 72087245 72087445 72087245 ID=MsG0580027970.01.T01:exon:23460;Parent=MsG0580027970.01.T01
Chr5 exon 72087106 72087161 72087106 ID=MsG0580027970.01.T01:exon:23459;Parent=MsG0580027970.01.T01
Chr5 exon 72086927 72087020 72086927 ID=MsG0580027970.01.T01:exon:23458;Parent=MsG0580027970.01.T01
Chr5 exon 72086749 72086842 72086749 ID=MsG0580027970.01.T01:exon:23457;Parent=MsG0580027970.01.T01
Chr5 exon 72086280 72086399 72086280 ID=MsG0580027970.01.T01:exon:23456;Parent=MsG0580027970.01.T01
Chr5 exon 72084871 72086127 72084871 ID=MsG0580027970.01.T01:exon:23455;Parent=MsG0580027970.01.T01
Chr5 CDS 72090070 72090166 72090070 ID=MsG0580027970.01.T01:cds;Parent=MsG0580027970.01.T01
Chr5 CDS 72089768 72089869 72089768 ID=MsG0580027970.01.T01:cds;Parent=MsG0580027970.01.T01
Chr5 CDS 72088697 72088857 72088697 ID=MsG0580027970.01.T01:cds;Parent=MsG0580027970.01.T01
Chr5 CDS 72088460 72088584 72088460 ID=MsG0580027970.01.T01:cds;Parent=MsG0580027970.01.T01
Chr5 CDS 72088125 72088256 72088125 ID=MsG0580027970.01.T01:cds;Parent=MsG0580027970.01.T01
Chr5 CDS 72087245 72087445 72087245 ID=MsG0580027970.01.T01:cds;Parent=MsG0580027970.01.T01
Chr5 CDS 72087106 72087161 72087106 ID=MsG0580027970.01.T01:cds;Parent=MsG0580027970.01.T01
Chr5 CDS 72086927 72087020 72086927 ID=MsG0580027970.01.T01:cds;Parent=MsG0580027970.01.T01
Chr5 CDS 72086749 72086842 72086749 ID=MsG0580027970.01.T01:cds;Parent=MsG0580027970.01.T01
Chr5 CDS 72086280 72086399 72086280 ID=MsG0580027970.01.T01:cds;Parent=MsG0580027970.01.T01
Chr5 CDS 72084871 72086127 72084871 ID=MsG0580027970.01.T01:cds;Parent=MsG0580027970.01.T01
Gene Sequence

>MsG0580027970.01.T01

ATGATGAACCAGTTTCCTCCTTCTAGGGTTTTGGAATCTCTCCATTCCAATGATATTACCTCTTCAAATTCTCAATCCCACGAGTTTCTCAGTTCCGATGATCAATGTTTTCAATCATGGCTGGAATCTCTCAATTCGATGGATGATGCATTCGATAATGTGTTTGCAAATTATCAGTTGCAGGAGTCTCTCACTTTTGACGAGGTCATTGATGTTGATGGAGTTGGTGGTAACTTCAATTTGGAGACCGATCTGGACACGTTGGGAAGCAGTACCATTGATTTCAAAAAGATTTTTGATGAGTTGGTAGCTGTGAAACAAGATACTAGTGGTGGTGTATCTTCGTTACAGTCAAGTCAGACGGAATCAGTTGGCATTAATTCATCCAGTTTGGAGTCTGATATTGCAGAAAATGTATTCCCTCGTAATATGGATGTGGAAGGCAACACAACTTTTTCACCTAGACTAACAAGCTACTTCCAAGATTTTCAGGAGCCTTTTCACAAACTTGTCTATCCAAAAGGGGATCCAGATGCTGTTACGCTAAGTAAGAGAGATGTTGATCAATTACAACCAAATACATACATCAATGACACGATTATCGATTTTTACATTCTATATATGAAGAATAAGATAGAAGAGAAGCAAAAGGCTAGGTTCCACTTTTTCAATAGTTTTTTCTTTCGAAAGCTGGCTGATATGGACAAAAATCCCCACCCTGATTGTGACGGCAAATCTGCATTTCAACATGTTCGTAAATGGACAAGAAAAGTTAATTTATTTGAAAAAGATTTTGTTTTCATGCCTGTGAACTTCAAACATCACTGGAGCTTAATAGTGATTTGTTATCCTGGCGAAGTGGTTAATATTAATGACAAAGAGCCGGAAAAGTCACTTAGGCTACCATGTATATTGCATATGGATTCTATCAAGGGACATCATAATGGTCTGAAAGACCTTGTGCAAAGTTATTTGTCTGAAGAATGGAAAGAGAGGAAGAATGATACATATGGAGAAGACCTCTCATCAAGATTCTTGAATATGCATTTTCTCCCCGTTGAGGTACCACAGCAGGAAAACTCATTTGATTGTGGCCTCTTTTTGCTTCATTATCTAAAGCTCTTCGTGGCTCAAGTTCCATTTGATTTCAACCCTCTGAGACTAACCAATTGTTCCAACTTTCTCAATGTGGACTGGTTTCCACCTACGGATGCTTATCTCAAGCGAACACATATCCGTACGTTAATATTTGAACTGGTGGAAAACCATGGTTCACATGAAGGCTTTTCCCCTGACGATGGTGATAACCAGCACTGCTCAGAATATATTGACAACAACAGGATTGGTGGTCAGTGTCATTTATTCAACGGGGAGGCATCGACTTCCCATTCTGGCCAGGGAATAGAAATGTTTCCATCTTACAATACTTGTAATATGGTTCTTAAGGAGCATTTTGAACCAAGAGCCGCATCGGGAACTTCACTGAGACATCGCCAATCTTTTGACCAGCAATCATCATCATCATCAAATCATTTGTTCAACAGTTCAAGACATTGCCAATCTTTTGACCAGCGAACATTATCATCATCTAATCATTTGTTCAACAGTTCAAGACATTGCCAATCTTTTGACCAGCGAACATTATCATCATCTAATCATTTGTTCAACAGTTCAAGACATTGCCACTCTTTTGACCAGCGATCATTATCATCATCTAATCATTTGTTCAACAGTTCAAGACATTGCCACTCTTTTGACCAGCGATCATTATCATCATCTAATCATTTGTTCAACAGTTCAAGACATTGCCAGTCTTTTGACCAGCGATCATTATCATCATCTAATCATTTGTTCAACAGTTCAAGACATTGCCAGTCTTTTGACCCTCGATCATTATCATCATCTAATCATTTGTTCAACAGTTCAAGACATTGCCACTCTTTTGACCAGCGATCATTATCATCATCTAATCATTTGTTCAACAGTTCAAGACATTGCCAGTCTTTTGACCAGCGATCATTATCATCATCTAATCATTTGTTCAACAGTTCAAGACATTGCCAGTCTTTTGACCAGCGATCATTATCATCATCTAATCATTTGTTCAACAGTTCAAGACATTGCCAATCTTTTGACCAACGATCATTACTTCATATGAATGATTCTACAGATACTATCAATTTTCCGGTTGATCCTCTCATTGATATTTCTCAACACTCGAATATGATGAGTACTGGCAACAAGAATTGGTATCCACACTTATCCTATCAAGGGACACCAACTCTACAAATGCATCATGTTTCTGATGATGCAGTAGATAACAATGTCATCAATGATGATGTTCAGATTATTGATAACATTAATCTTGATTTTTGGAATGAGAGACCTCCAAAGAAGAGGCGGCTTATGCCTCCTTCGGTGGAAGTCATGGAATCCTGA
Protein sequence

>MsG0580027970.01.T01

MMNQFPPSRVLESLHSNDITSSNSQSHEFLSSDDQCFQSWLESLNSMDDAFDNVFANYQLQESLTFDEVIDVDGVGGNFNLETDLDTLGSSTIDFKKIFDELVAVKQDTSGGVSSLQSSQTESVGINSSSLESDIAENVFPRNMDVEGNTTFSPRLTSYFQDFQEPFHKLVYPKGDPDAVTLSKRDVDQLQPNTYINDTIIDFYILYMKNKIEEKQKARFHFFNSFFFRKLADMDKNPHPDCDGKSAFQHVRKWTRKVNLFEKDFVFMPVNFKHHWSLIVICYPGEVVNINDKEPEKSLRLPCILHMDSIKGHHNGLKDLVQSYLSEEWKERKNDTYGEDLSSRFLNMHFLPVEVPQQENSFDCGLFLLHYLKLFVAQVPFDFNPLRLTNCSNFLNVDWFPPTDAYLKRTHIRTLIFELVENHGSHEGFSPDDGDNQHCSEYIDNNRIGGQCHLFNGEASTSHSGQGIEMFPSYNTCNMVLKEHFEPRAASGTSLRHRQSFDQQSSSSSNHLFNSSRHCQSFDQRTLSSSNHLFNSSRHCQSFDQRTLSSSNHLFNSSRHCHSFDQRSLSSSNHLFNSSRHCHSFDQRSLSSSNHLFNSSRHCQSFDQRSLSSSNHLFNSSRHCQSFDPRSLSSSNHLFNSSRHCHSFDQRSLSSSNHLFNSSRHCQSFDQRSLSSSNHLFNSSRHCQSFDQRSLSSSNHLFNSSRHCQSFDQRSLLHMNDSTDTINFPVDPLIDISQHSNMMSTGNKNWYPHLSYQGTPTLQMHHVSDDAVDNNVINDDVQIIDNINLDFWNERPPKKRRLMPPSVEVMES*