AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028609.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028609.01.T01 MTR_5g075530 87.302 126 16 0 123 248 172 297 2.16e-74 230
MsG0580028609.01.T01 MTR_3g467620 81.746 126 23 0 123 248 118 243 3.83e-70 218
MsG0580028609.01.T01 MTR_5g075530 88.000 50 6 0 123 172 172 221 1.64e-22 93.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028609.01.T01 AT5G20920 79.365 126 26 0 123 248 120 245 1.27e-68 214
MsG0580028609.01.T01 AT5G20920 79.365 126 26 0 123 248 120 245 1.27e-68 214
MsG0580028609.01.T01 AT5G20920 79.365 126 26 0 123 248 119 244 1.45e-68 214
MsG0580028609.01.T01 AT3G07920 62.205 127 44 1 123 245 18 144 1.47e-45 151
MsG0580028609.01.T01 AT5G01940 46.479 142 71 3 123 260 77 217 4.77e-32 118
MsG0580028609.01.T01 AT5G01940 48.413 126 63 2 123 247 77 201 3.49e-31 115
MsG0580028609.01.T01 AT5G01940 48.413 126 63 2 123 247 109 233 3.83e-31 116

Find 73 sgRNAs with CRISPR-Local

Find 532 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGAGGTCTTAGAGCCTTTC+TGG 0.057624 5:-83327391 MsG0580028609.01.T01:CDS
GATAAATATCATAATTTATT+TGG 0.076958 5:-83319488 MsG0580028609.01.T01:three_prime_UTR
CTGGAGGCTTCTAAGCCTTT+AGG 0.242858 5:-83327372 MsG0580028609.01.T01:CDS
CTGGAAGTCATTAAGTCTTT+AGG 0.249336 5:-83327270 MsG0580028609.01.T01:CDS
GGAGGAAGCATGAGCCCTTC+TGG 0.269973 5:-83327411 MsG0580028609.01.T01:CDS
CGGAGTCTCAGGAGCCCTTT+TGG 0.296745 5:-83327432 MsG0580028609.01.T01:CDS
AGAATTCCTGCAAAACTCTT+TGG 0.299200 5:+83320229 None:intergenic
GAAATAAGCATTGTTATAGA+TGG 0.315874 5:-83319643 MsG0580028609.01.T01:three_prime_UTR
TTGTCCCAAGACTCGTGCTT+GGG 0.318285 5:+83327224 None:intergenic
TTGTCCCAAGACTCGTGCTT+GGG 0.318285 5:+83327326 None:intergenic
TTGGTTGTGAAGGGAAGATT+TGG 0.327299 5:-83320253 MsG0580028609.01.T01:CDS
TTAAGTCTTTAGGAAGGTTT+TGG 0.333227 5:-83327260 MsG0580028609.01.T01:CDS
TATTTGTGTTGAAATTGATT+AGG 0.359799 5:-83319701 MsG0580028609.01.T01:exon
AGGAATGCCGAGGCATGATT+TGG 0.368404 5:-83319734 MsG0580028609.01.T01:CDS
CGCCGATCTCCAGCAAGATC+TGG 0.373236 5:+83320777 None:intergenic
GATGAATATGTCATTTGTAT+TGG 0.394913 5:-83319963 MsG0580028609.01.T01:CDS
GCAACAAAACCAGCTTTGAT+TGG 0.396441 5:+83319773 None:intergenic
GGCGAGCACGCCGGAGTCTC+AGG 0.397542 5:-83327443 MsG0580028609.01.T01:CDS
TGTACTAGTGGTTATATAGA+TGG 0.407956 5:-83320286 MsG0580028609.01.T01:CDS
TATTGCTTGCAGTGTGGATC+AGG 0.417838 5:-83319809 MsG0580028609.01.T01:intron
TTGTATTGGATGCAAGAGTC+TGG 0.425485 5:-83319949 MsG0580028609.01.T01:CDS
AAATAAGCATTGTTATAGAT+GGG 0.427789 5:-83319642 MsG0580028609.01.T01:three_prime_UTR
CTTGTCCCAAGACTCGTGCT+TGG 0.428646 5:+83327223 None:intergenic
CTTGTCCCAAGACTCGTGCT+TGG 0.428646 5:+83327325 None:intergenic
CAAAAGGGCTCCTGAGACTC+CGG 0.438142 5:+83327433 None:intergenic
GGGCTCATGCTTCCTCCAAA+AGG 0.448326 5:+83327417 None:intergenic
CTTAGATGGGTGATGCCTTA+AGG 0.448524 5:-83327464 None:intergenic
GAACATAATCCAGATCTTGC+TGG 0.451726 5:-83320786 MsG0580028609.01.T01:CDS
ACTCCGGCGTGCTCGCCTTA+AGG 0.452880 5:+83327449 None:intergenic
TATAGATGGACAGCAAAGAT+TGG 0.470808 5:-83320272 MsG0580028609.01.T01:CDS
AAGAAAGCCATAACATGGTC+TGG 0.472766 5:+83320322 None:intergenic
TGTCCCAAGACTCGTGCTTG+GGG 0.499397 5:+83327225 None:intergenic
TGTCCCAAGACTCGTGCTTG+GGG 0.499397 5:+83327327 None:intergenic
AGAACCGTCTCTTCTTTCTC+CGG 0.503608 5:-83319908 MsG0580028609.01.T01:intron
TCCCAAGACTCGTGCTTGGG+GGG 0.512729 5:+83327227 None:intergenic
TCGACCGCCAGACCATGTTA+TGG 0.515326 5:-83320329 MsG0580028609.01.T01:CDS
GGCTCATGCTTCCTCCAAAA+GGG 0.519773 5:+83327418 None:intergenic
ACCGTCATAAATATTCCTAA+AGG 0.523121 5:+83327357 None:intergenic
ATCCAGATCTTGCTGGAGAT+CGG 0.530264 5:-83320779 MsG0580028609.01.T01:CDS
TTGCTCGTGTTGGCGGCAGA+AGG 0.531864 5:-83319754 MsG0580028609.01.T01:CDS
TCTGGACACATTACTTTCAA+AGG 0.537856 5:-83319931 MsG0580028609.01.T01:CDS
GTCCCAAGACTCGTGCTTGG+GGG 0.539543 5:+83327226 None:intergenic
TTTGGTACAGCTTCTTGGCA+GGG 0.540799 5:-83320826 MsG0580028609.01.T01:CDS
TCAGTTGCTCCAATCAAAGC+TGG 0.541836 5:-83319782 MsG0580028609.01.T01:CDS
GTGCCTTCACGGCGAACTCG+AGG 0.547950 5:+83320735 None:intergenic
CCTCCTCGAGTTCGCCGTGA+AGG 0.548479 5:-83320738 MsG0580028609.01.T01:CDS
CAAGCACGAGTCTTGGGACA+AGG 0.549941 5:-83327222 MsG0580028609.01.T01:CDS
CAAGCACGAGTCTTGGGACA+AGG 0.549941 5:-83327324 MsG0580028609.01.T01:CDS
TGTATGTAGCATTCAAACGC+TGG 0.551720 5:+83319670 None:intergenic
AAGTGATGACAACATGGGAT+TGG 0.560986 5:-83327299 MsG0580028609.01.T01:CDS
GCCTTTAGGAATATTTATGA+CGG 0.567874 5:-83327358 MsG0580028609.01.T01:CDS
ATCGGCGAAGAACAGTTATG+AGG 0.576484 5:-83320761 MsG0580028609.01.T01:CDS
CAGCAAAGATTGGTTGTGAA+GGG 0.579584 5:-83320262 MsG0580028609.01.T01:CDS
ACAGCAAAGATTGGTTGTGA+AGG 0.582650 5:-83320263 MsG0580028609.01.T01:CDS
GTCCCAAGACTCGTGCTTGG+GGG 0.589626 5:+83327328 None:intergenic
AGGCTTAGAAGCCTCCAGAA+AGG 0.595055 5:+83327377 None:intergenic
AAGGCGAAGTGATGACAACA+TGG 0.598818 5:-83327305 MsG0580028609.01.T01:CDS
CTTGCTGAACTATGTACTAG+TGG 0.601332 5:-83320298 MsG0580028609.01.T01:CDS
AGTAAGGCCAAATCATGCCT+CGG 0.608563 5:+83319727 None:intergenic
AATAAGCATTGTTATAGATG+GGG 0.609307 5:-83319641 MsG0580028609.01.T01:three_prime_UTR
AAGTCATTAAGTCTTTAGGA+AGG 0.624485 5:-83327266 MsG0580028609.01.T01:CDS
CCTTCACGGCGAACTCGAGG+AGG 0.625429 5:+83320738 None:intergenic
CAAGCAAGAAAGCCATAACA+TGG 0.625960 5:+83320317 None:intergenic
AGGTCTTAGAGCCTTTCTGG+AGG 0.635719 5:-83327388 MsG0580028609.01.T01:CDS
AAGGCTCTAAGACCTCCAGA+AGG 0.636074 5:+83327396 None:intergenic
AATACTTACTGATATATCGT+CGG 0.636337 5:+83320206 None:intergenic
ATGCCTTAAGGCGAGCACGC+CGG 0.647264 5:-83327452 MsG0580028609.01.T01:CDS
AGGCTCTAAGACCTCCAGAA+GGG 0.649875 5:+83327397 None:intergenic
GGAAGCATGAGCCCTTCTGG+AGG 0.661605 5:-83327408 MsG0580028609.01.T01:CDS
CACACCGGAGAAAGAAGAGA+CGG 0.669379 5:+83319904 None:intergenic
TGGCGGCAGAAGGAATGCCG+AGG 0.670535 5:-83319744 MsG0580028609.01.T01:CDS
AAAGCCATAACATGGTCTGG+CGG 0.709853 5:+83320325 None:intergenic
AGGCGAAGTGATGACAACAT+GGG 0.721264 5:-83327304 MsG0580028609.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATATTAAAAAATT+CGG + Chr5:83325577-83325596 None:intergenic 0.0%
!!! TTTATTTTTTATTTTTTATT+GGG + Chr5:83325718-83325737 None:intergenic 0.0%
!!! TTTTATTTTTTATTTTTTAT+TGG + Chr5:83325719-83325738 None:intergenic 0.0%
!! AAAAAAATTTAAAAAGATTC+TGG + Chr5:83325627-83325646 None:intergenic 10.0%
!! AATCTAAAAAAAAATTTCAT+AGG + Chr5:83324279-83324298 None:intergenic 10.0%
!! ATCTAAAAAAAAATTTCATA+GGG + Chr5:83324278-83324297 None:intergenic 10.0%
!! GATAAATATCATAATTTATT+TGG - Chr5:83327456-83327475 MsG0580028609.01.T01:CDS 10.0%
!! TTTAAAAAAAAGAAAAAATC+TGG - Chr5:83324654-83324673 MsG0580028609.01.T01:intron 10.0%
!!! ATATTTTTATTTTTTGATTG+GGG - Chr5:83324417-83324436 MsG0580028609.01.T01:intron 10.0%
!!! TATCATTAGTTTTAAATTAA+TGG + Chr5:83322068-83322087 None:intergenic 10.0%
!!! TATGTTGATATTTTTTTTAT+CGG - Chr5:83326275-83326294 MsG0580028609.01.T01:intron 10.0%
!! AATATGATCTTTACAATTAT+GGG + Chr5:83323368-83323387 None:intergenic 15.0%
!! CTGAAAAAATTTAAAAATTC+TGG - Chr5:83324702-83324721 MsG0580028609.01.T01:intron 15.0%
!! GCATATATTTATACTATAAT+AGG - Chr5:83323027-83323046 MsG0580028609.01.T01:intron 15.0%
!! TAATATGATCTTTACAATTA+TGG + Chr5:83323369-83323388 None:intergenic 15.0%
!! TCTAAAAAAAAATTTCATAG+GGG + Chr5:83324277-83324296 None:intergenic 15.0%
!! TTAGAGAATATTTGATTATA+GGG - Chr5:83324205-83324224 MsG0580028609.01.T01:intron 15.0%
!! TTATTAGTATGAATCTAATA+AGG + Chr5:83321072-83321091 None:intergenic 15.0%
!!! ACAACATAATAATTTGAAAT+CGG - Chr5:83322446-83322465 MsG0580028609.01.T01:intron 15.0%
!!! ACTCTTTTATTTATTTACTT+TGG + Chr5:83320847-83320866 None:intergenic 15.0%
!!! ATGTTGATATTTTTTTTATC+GGG - Chr5:83326276-83326295 MsG0580028609.01.T01:intron 15.0%
!!! ATTTATTTTCCTATCAAATT+AGG - Chr5:83321538-83321557 MsG0580028609.01.T01:intron 15.0%
!!! ATTTTCATTAGTATTTTTTC+CGG + Chr5:83325048-83325067 None:intergenic 15.0%
!!! ATTTTTGTGTATTTATAAAC+CGG + Chr5:83325023-83325042 None:intergenic 15.0%
!!! TCTGAAAAAATTTAAAATTC+TGG + Chr5:83325473-83325492 None:intergenic 15.0%
!!! TCTGTTTGTTTTATTTTTTA+AGG + Chr5:83323262-83323281 None:intergenic 15.0%
!!! TTTTTATTTACTCTTCTATT+CGG - Chr5:83321225-83321244 MsG0580028609.01.T01:intron 15.0%
!! AAAATATAGGCAAACTAAAT+AGG + Chr5:83320911-83320930 None:intergenic 20.0%
!! AAATATATGCTTTATGTAGA+TGG + Chr5:83323017-83323036 None:intergenic 20.0%
!! AACTATTTGAACATTGTTTA+CGG + Chr5:83322308-83322327 None:intergenic 20.0%
!! AAGAAAAAAAAACAAAAAGC+AGG + Chr5:83326083-83326102 None:intergenic 20.0%
!! AAGAGTTTAATCATATTCAA+AGG - Chr5:83320861-83320880 MsG0580028609.01.T01:CDS 20.0%
!! AATATTAATGTCGAAAATTG+AGG - Chr5:83321830-83321849 MsG0580028609.01.T01:intron 20.0%
!! AATTTAAATCGATATATCCA+TGG + Chr5:83326941-83326960 None:intergenic 20.0%
!! AGAAAAAAAAACAAAAAGCA+GGG + Chr5:83326082-83326101 None:intergenic 20.0%
!! AGAGTTTAATCATATTCAAA+GGG - Chr5:83320862-83320881 MsG0580028609.01.T01:CDS 20.0%
!! AGTATTTCTCAAAAAATTTC+CGG + Chr5:83325150-83325169 None:intergenic 20.0%
!! ATAAAATAAATAGACGAAGT+TGG + Chr5:83321099-83321118 None:intergenic 20.0%
!! ATCTAAAAAAAAAATTTCCC+AGG - Chr5:83325863-83325882 MsG0580028609.01.T01:intron 20.0%
!! ATGTATTCAAATTGCTTTAT+AGG - Chr5:83319865-83319884 MsG0580028609.01.T01:intron 20.0%
!! ATTCTCGAAAATAAAAATTC+TGG + Chr5:83325284-83325303 None:intergenic 20.0%
!! CGAAAATAAAAATGAAATTC+TGG + Chr5:83325231-83325250 None:intergenic 20.0%
!! CGGAAAAAATTTAAAAAATC+TGG + Chr5:83325514-83325533 None:intergenic 20.0%
!! CTAAAAAAAAATTTCATAGG+GGG + Chr5:83324276-83324295 None:intergenic 20.0%
!! CTATAATCAAATATTCTCTA+AGG + Chr5:83324206-83324225 None:intergenic 20.0%
!! CTGGAAAATAAAAAATAATC+TGG - Chr5:83324806-83324825 MsG0580028609.01.T01:intron 20.0%
!! CTTAGAGAATATTTGATTAT+AGG - Chr5:83324204-83324223 MsG0580028609.01.T01:intron 20.0%
!! GAAATTGTTTAAACTACTTT+AGG + Chr5:83321469-83321488 None:intergenic 20.0%
!! GAGATATGAATCATATAAAT+TGG + Chr5:83323240-83323259 None:intergenic 20.0%
!! GTTCAAATAGTTAAAAGAAT+TGG - Chr5:83322316-83322335 MsG0580028609.01.T01:intron 20.0%
!! TAAAATAAAACCATTCTTTC+CGG - Chr5:83322551-83322570 MsG0580028609.01.T01:intron 20.0%
!! TAAATACACACAAAAATTTC+CGG - Chr5:83325128-83325147 MsG0580028609.01.T01:intron 20.0%
!! TATAAATACACAAAAATTCC+CGG - Chr5:83325026-83325045 MsG0580028609.01.T01:intron 20.0%
!! TATAAATACACAAAAGTTTC+CGG - Chr5:83325001-83325020 MsG0580028609.01.T01:intron 20.0%
!! TATTTATAAACCGAGAATAA+GGG + Chr5:83324989-83325008 None:intergenic 20.0%
!! TATTTCAGATGAATAAAGTT+TGG + Chr5:83320806-83320825 None:intergenic 20.0%
!! TATTTGATTATAGGGTTAAT+AGG - Chr5:83324213-83324232 MsG0580028609.01.T01:intron 20.0%
!! TATTTGTGTTGAAATTGATT+AGG - Chr5:83327243-83327262 MsG0580028609.01.T01:CDS 20.0%
!! TCTAAAAAAAAAATTTCCCA+GGG - Chr5:83325864-83325883 MsG0580028609.01.T01:intron 20.0%
!! TTAACTAGTAATATATGTTG+TGG + Chr5:83322888-83322907 None:intergenic 20.0%
!! TTATAAAACAAGTTCTCATT+AGG + Chr5:83321491-83321510 None:intergenic 20.0%
!! TTCAACACAAATAAAAAGTA+AGG + Chr5:83327236-83327255 None:intergenic 20.0%
!! TTTAAATTCCAATGAAATTC+TGG + Chr5:83325309-83325328 None:intergenic 20.0%
!!! AAATAAGCATTGTTATAGAT+GGG - Chr5:83327302-83327321 MsG0580028609.01.T01:CDS 20.0%
!!! AATAGTTTAATTGACTGTTT+TGG - Chr5:83324091-83324110 MsG0580028609.01.T01:intron 20.0%
!!! ATAGTTTAATTGACTGTTTT+GGG - Chr5:83324092-83324111 MsG0580028609.01.T01:intron 20.0%
!!! ATTTATTTACTTTGGAAGTT+CGG + Chr5:83320839-83320858 None:intergenic 20.0%
!!! CAAAGTATTTTTTAGAAAGT+AGG - Chr5:83320609-83320628 MsG0580028609.01.T01:intron 20.0%
!!! CTTTTTGTTTTTTTTTCTTG+TGG - Chr5:83326084-83326103 MsG0580028609.01.T01:intron 20.0%
!!! TGATTTGTAGAAGAAAAATA+CGG + Chr5:83326515-83326534 None:intergenic 20.0%
!!! TGTATTTTTTTCCTTATTCT+CGG - Chr5:83324976-83324995 MsG0580028609.01.T01:intron 20.0%
!!! TGTCTTTTTAACTTTGTTAT+CGG + Chr5:83323457-83323476 None:intergenic 20.0%
!!! TTGTTTTTTTTTTTTCTCTC+AGG + Chr5:83321917-83321936 None:intergenic 20.0%
!!! TTTAGGTAATATTTTGAACA+CGG + Chr5:83326007-83326026 None:intergenic 20.0%
!!! TTTATTTTGGTGTGTTTTTT+TGG - Chr5:83320731-83320750 MsG0580028609.01.T01:CDS 20.0%
!!! TTTTATTACTTTTGATGCTT+TGG - Chr5:83320035-83320054 MsG0580028609.01.T01:intron 20.0%
!!! TTTTATTTACTCTTCTATTC+GGG - Chr5:83321226-83321245 MsG0580028609.01.T01:intron 20.0%
!!! TTTTCATTAGTATTTTTTCC+GGG + Chr5:83325047-83325066 None:intergenic 20.0%
! AAAGTAAATGGTGCATAAAA+GGG - Chr5:83321326-83321345 MsG0580028609.01.T01:intron 25.0%
! AACAGTCAATTAAACTATTC+TGG + Chr5:83324090-83324109 None:intergenic 25.0%
! AATACTGAATGGTAAAACAA+TGG + Chr5:83327101-83327120 None:intergenic 25.0%
! AATACTTACTGATATATCGT+CGG + Chr5:83326741-83326760 None:intergenic 25.0%
! AATTTGAATACATACTCCAT+GGG + Chr5:83319858-83319877 None:intergenic 25.0%
! AGTAAAAACTCAAGTTACTT+AGG + Chr5:83321136-83321155 None:intergenic 25.0%
! AGTGAATAAAGAATAACCAA+GGG + Chr5:83326473-83326492 None:intergenic 25.0%
! AGTTTATTTATTGCATCTTG+AGG - Chr5:83322652-83322671 MsG0580028609.01.T01:intron 25.0%
! ATGCTATATACACAAATTTG+TGG + Chr5:83321769-83321788 None:intergenic 25.0%
! ATGTTAGGATAAAGACAAAA+TGG + Chr5:83321254-83321273 None:intergenic 25.0%
! ATTATGTATATTGCATCCTA+TGG + Chr5:83322948-83322967 None:intergenic 25.0%
! ATTGTCTTGCAAACTTAAAT+TGG - Chr5:83321653-83321672 MsG0580028609.01.T01:intron 25.0%
! ATTTGTAGAAGAAAAATACG+GGG + Chr5:83326513-83326532 None:intergenic 25.0%
! CAATCTAAAGAAGAAAGAAA+AGG + Chr5:83321002-83321021 None:intergenic 25.0%
! CACAAATTTGTGGAAAAATT+TGG + Chr5:83321759-83321778 None:intergenic 25.0%
! CACAAGATAATCAAATAAGA+AGG + Chr5:83320971-83320990 None:intergenic 25.0%
! CATATAAATTGGATTGATTG+TGG + Chr5:83323229-83323248 None:intergenic 25.0%
! CATATACGTGTATAAAATCA+TGG + Chr5:83322416-83322435 None:intergenic 25.0%
! CTAAAAAAAAAATTTCCCAG+GGG - Chr5:83325865-83325884 MsG0580028609.01.T01:intron 25.0%
! CTATAATAGGAATTCATGTA+AGG - Chr5:83323040-83323059 MsG0580028609.01.T01:intron 25.0%
! CTATATAATCAAGGGTTAAT+AGG + Chr5:83325928-83325947 None:intergenic 25.0%
! CTATTAACCCTTGATTATAT+AGG - Chr5:83325926-83325945 MsG0580028609.01.T01:intron 25.0%
! GAAGAATCCTATATAATCAA+GGG + Chr5:83325936-83325955 None:intergenic 25.0%
! GATTTGTAGAAGAAAAATAC+GGG + Chr5:83326514-83326533 None:intergenic 25.0%
! GTAAAAACTCAAGTTACTTA+GGG + Chr5:83321135-83321154 None:intergenic 25.0%
! GTATATATCCAATCTTTGAA+AGG - Chr5:83322363-83322382 MsG0580028609.01.T01:intron 25.0%
! GTATTTATAAACCGAGAATA+AGG + Chr5:83324990-83325009 None:intergenic 25.0%
! TAAAAAAAAAATTTCCCAGG+GGG - Chr5:83325866-83325885 MsG0580028609.01.T01:intron 25.0%
! TAGTAATATATGTTGTGGTT+TGG + Chr5:83322883-83322902 None:intergenic 25.0%
! TCAAACTAACAAACTCAATT+AGG - Chr5:83322841-83322860 MsG0580028609.01.T01:intron 25.0%
! TGAAGAATCCTATATAATCA+AGG + Chr5:83325937-83325956 None:intergenic 25.0%
! TGAAGTGTAGTATTGTTAAA+AGG + Chr5:83321429-83321448 None:intergenic 25.0%
! TGTTAGGATAAAGACAAAAT+GGG + Chr5:83321253-83321272 None:intergenic 25.0%
! TTATCAAATTGACATAGAGA+CGG - Chr5:83323394-83323413 MsG0580028609.01.T01:intron 25.0%
! TTCCAAGTAATAACTGAAAA+GGG + Chr5:83326044-83326063 None:intergenic 25.0%
! TTTATTTACTCTTCTATTCG+GGG - Chr5:83321227-83321246 MsG0580028609.01.T01:intron 25.0%
! TTTCCAAGTAATAACTGAAA+AGG + Chr5:83326045-83326064 None:intergenic 25.0%
!! AACTGTGTTTGTGAATTTTA+TGG - Chr5:83326238-83326257 MsG0580028609.01.T01:intron 25.0%
!! AATAAGCATTGTTATAGATG+GGG - Chr5:83327303-83327322 MsG0580028609.01.T01:CDS 25.0%
!! AATTTAAGTTTGCAAGACAA+TGG + Chr5:83321654-83321673 None:intergenic 25.0%
!! ATAATCTTTATTTCTTTCGG+CGG - Chr5:83320340-83320359 MsG0580028609.01.T01:intron 25.0%
!! ATTCTTCATTTTATCCTTGT+TGG - Chr5:83325949-83325968 MsG0580028609.01.T01:intron 25.0%
!! CACGTATAGATAATTTTTCA+CGG - Chr5:83327432-83327451 MsG0580028609.01.T01:CDS 25.0%
!! CGCATAATCTTTATTTCTTT+CGG - Chr5:83320337-83320356 MsG0580028609.01.T01:CDS 25.0%
!! CTCTTTTAGATATAAGGATA+GGG - Chr5:83323426-83323445 MsG0580028609.01.T01:intron 25.0%
!! GAAATAAGCATTGTTATAGA+TGG - Chr5:83327301-83327320 MsG0580028609.01.T01:CDS 25.0%
!! GATGAATATGTCATTTGTAT+TGG - Chr5:83326981-83327000 MsG0580028609.01.T01:intron 25.0%
!! GGATCATTGCTTATTTATTT+TGG - Chr5:83320718-83320737 MsG0580028609.01.T01:CDS 25.0%
!! GTGAATCTCTTTTAGATATA+AGG - Chr5:83323420-83323439 MsG0580028609.01.T01:intron 25.0%
!! TCGCATAACTTTATTTCTTT+CGG - Chr5:83320232-83320251 MsG0580028609.01.T01:CDS 25.0%
!! TCTCTTTTAGATATAAGGAT+AGG - Chr5:83323425-83323444 MsG0580028609.01.T01:intron 25.0%
!! TGAAGAATCTCAATTTTACA+AGG - Chr5:83325835-83325854 MsG0580028609.01.T01:intron 25.0%
!! TGAAGAATCTCAATTTTACA+AGG + Chr5:83325854-83325835 None:intergenic 25.0%
!! TTATTGAAGTGATTAGCTAA+TGG + Chr5:83323147-83323166 None:intergenic 25.0%
!! TTCCATTTGATTTCTTCTTA+TGG - Chr5:83321865-83321884 MsG0580028609.01.T01:intron 25.0%
!!! ACTTTGTTTCTAAACTTCAT+AGG + Chr5:83321196-83321215 None:intergenic 25.0%
!!! CATATTTTTTCCCTTATTCT+CGG - Chr5:83325101-83325120 MsG0580028609.01.T01:intron 25.0%
!!! CTTTTGTTTTACATCATCAT+TGG + Chr5:83323180-83323199 None:intergenic 25.0%
!!! GTTTTAATCCAATCAATATC+CGG - Chr5:83322144-83322163 MsG0580028609.01.T01:intron 25.0%
!!! TTTGAAATCGGTTTGAATTA+TGG - Chr5:83322458-83322477 MsG0580028609.01.T01:intron 25.0%
AAAAAAAACAAAAAGCAGGG+AGG + Chr5:83326079-83326098 None:intergenic 30.0%
AAAAGAGGATACACATACTT+TGG + Chr5:83322730-83322749 None:intergenic 30.0%
AAAAGTCACCTATATTACAG+GGG - Chr5:83325896-83325915 MsG0580028609.01.T01:intron 30.0%
AAAAGTCACCTATATTACAG+GGG + Chr5:83325915-83325896 None:intergenic 30.0%
AAATAAGAAATAGCAGCATG+TGG - Chr5:83322792-83322811 MsG0580028609.01.T01:intron 30.0%
AACTGTACTTGCAAAAAGTA+CGG - Chr5:83323729-83323748 MsG0580028609.01.T01:intron 30.0%
AAGTAAATGGTGCATAAAAG+GGG - Chr5:83321327-83321346 MsG0580028609.01.T01:intron 30.0%
AATCAGCTGAATTTCAGAAA+TGG - Chr5:83326778-83326797 MsG0580028609.01.T01:intron 30.0%
AATGGTAAAACAATGGAAAC+GGG + Chr5:83327094-83327113 None:intergenic 30.0%
ACCGTCATAAATATTCCTAA+AGG + Chr5:83319590-83319609 None:intergenic 30.0%
AGATGTAAAACATAACACAG+TGG - Chr5:83322222-83322241 MsG0580028609.01.T01:intron 30.0%
AGTTCAGTTTGCAAAGTAAA+TGG - Chr5:83321314-83321333 MsG0580028609.01.T01:intron 30.0%
ATATAGGCAAACTAAATAGG+AGG + Chr5:83320908-83320927 None:intergenic 30.0%
ATTAATGTCGAAAATTGAGG+AGG - Chr5:83321833-83321852 MsG0580028609.01.T01:intron 30.0%
ATTTCGAAAAAACCTAAGCT+CGG - Chr5:83325066-83325085 MsG0580028609.01.T01:intron 30.0%
ATTTGAATACATACTCCATG+GGG + Chr5:83319857-83319876 None:intergenic 30.0%
CAAAAGTCACCTATATTACA+GGG - Chr5:83325895-83325914 MsG0580028609.01.T01:intron 30.0%
CAAAAGTCACCTATATTACA+GGG + Chr5:83325914-83325895 None:intergenic 30.0%
CAAAGTAAATGGTGCATAAA+AGG - Chr5:83321325-83321344 MsG0580028609.01.T01:intron 30.0%
CAATTTGAATACATACTCCA+TGG + Chr5:83319859-83319878 None:intergenic 30.0%
CAGTGAATAAAGAATAACCA+AGG + Chr5:83326474-83326493 None:intergenic 30.0%
CATTAATATTCTCACAATCC+AGG + Chr5:83321820-83321839 None:intergenic 30.0%
CGATCAATCTAATAAGAAGT+AGG + Chr5:83321598-83321617 None:intergenic 30.0%
CTTTGTTAGAATTCAGCAAT+AGG - Chr5:83322118-83322137 MsG0580028609.01.T01:intron 30.0%
GAAATAGCGAATTTCGATTT+AGG + Chr5:83321050-83321069 None:intergenic 30.0%
GAATGGTAAAACAATGGAAA+CGG + Chr5:83327095-83327114 None:intergenic 30.0%
GAGAATTTCCAGAATTTCAT+TGG - Chr5:83325298-83325317 MsG0580028609.01.T01:intron 30.0%
TAAGGAATACTAGGATTCTA+GGG - Chr5:83323752-83323771 MsG0580028609.01.T01:intron 30.0%
TAGACTAATAACCACATGTT+AGG + Chr5:83321269-83321288 None:intergenic 30.0%
TAGTATTTATAGCCTGCTAT+GGG - Chr5:83323816-83323835 MsG0580028609.01.T01:intron 30.0%
TATTTAGTCGAACTCGTTTA+GGG - Chr5:83320206-83320225 MsG0580028609.01.T01:intron 30.0%
TCAGATGAATAAAGTTTGGA+AGG + Chr5:83320802-83320821 None:intergenic 30.0%
TCCGGCAAAATAAATGTTAA+AGG + Chr5:83320174-83320193 None:intergenic 30.0%
TGTACTAGTGGTTATATAGA+TGG - Chr5:83326658-83326677 MsG0580028609.01.T01:intron 30.0%
TGTATTTATAAACCGAGCTT+AGG + Chr5:83325081-83325100 None:intergenic 30.0%
TGTTAAAAGGTCGCAATAAA+GGG + Chr5:83321416-83321435 None:intergenic 30.0%
TTAGTATATATGTCGAGCTT+AGG - Chr5:83324944-83324963 MsG0580028609.01.T01:intron 30.0%
TTATTTAGTCGAACTCGTTT+AGG - Chr5:83320205-83320224 MsG0580028609.01.T01:intron 30.0%
TTCGATTTAGGAAAAGTAGT+AGG + Chr5:83321038-83321057 None:intergenic 30.0%
TTGTTAAAAGGTCGCAATAA+AGG + Chr5:83321417-83321436 None:intergenic 30.0%
TTTAGTATGTATGTGCCTTT+GGG - Chr5:83319773-83319792 MsG0580028609.01.T01:CDS 30.0%
TTTGTCTTTATCCTAACATG+TGG - Chr5:83321255-83321274 MsG0580028609.01.T01:intron 30.0%
! AAGTCATTAAGTCTTTAGGA+AGG - Chr5:83319678-83319697 MsG0580028609.01.T01:three_prime_UTR 30.0%
! ACTTGAGTTTTTACTTTGCT+TGG - Chr5:83321141-83321160 MsG0580028609.01.T01:intron 30.0%
! ATTCACAAACACAGTTTTCT+TGG + Chr5:83326234-83326253 None:intergenic 30.0%
! CATAACTTTATTTCTTTCGG+CGG - Chr5:83320235-83320254 MsG0580028609.01.T01:CDS 30.0%
! CTTGTGGATTCTAACATTTT+TGG - Chr5:83326100-83326119 MsG0580028609.01.T01:intron 30.0%
! GAATCTCAATTTTACAAGGA+CGG + Chr5:83325858-83325839 None:intergenic 30.0%
! GCCTTTAGGAATATTTATGA+CGG - Chr5:83319586-83319605 MsG0580028609.01.T01:three_prime_UTR 30.0%
! TACCCTTTTCAGTTATTACT+TGG - Chr5:83326039-83326058 MsG0580028609.01.T01:intron 30.0%
! TATTTAGTCGAACCCTTTTA+GGG - Chr5:83320260-83320279 MsG0580028609.01.T01:CDS 30.0%
! TGTTTCTAAACTTCATAGGA+GGG + Chr5:83321192-83321211 None:intergenic 30.0%
! TTAATCTAAGGTTATTGCCA+TGG - Chr5:83326921-83326940 MsG0580028609.01.T01:intron 30.0%
! TTATTTAGTCGAACCCTTTT+AGG - Chr5:83320259-83320278 MsG0580028609.01.T01:CDS 30.0%
!! ATTGAGTTTGTTAGTTTGAG+AGG + Chr5:83322840-83322859 None:intergenic 30.0%
!! GCTTATTTTCTTATATGCTC+CGG - Chr5:83320084-83320103 MsG0580028609.01.T01:intron 30.0%
!! TTAAGTCTTTAGGAAGGTTT+TGG - Chr5:83319684-83319703 MsG0580028609.01.T01:exon 30.0%
!! TTGTTTCTAAACTTCATAGG+AGG + Chr5:83321193-83321212 None:intergenic 30.0%
!! TTTCATCTTCAAGCTCTAAA+TGG - Chr5:83320693-83320712 MsG0580028609.01.T01:CDS 30.0%
!!! ATTTTTTATTGGGGTACATG+TGG + Chr5:83325708-83325727 None:intergenic 30.0%
!!! CTATTTTGTTTGTTTTGTCC+AGG + Chr5:83320589-83320608 None:intergenic 30.0%
!!! GCCTTTAACATTTATTTTGC+CGG - Chr5:83320170-83320189 MsG0580028609.01.T01:intron 30.0%
AAAACGTAAAATCACCCTAG+GGG + Chr5:83319824-83319843 None:intergenic 35.0%
AAAGTACGGTAAGGAATACT+AGG - Chr5:83323743-83323762 MsG0580028609.01.T01:intron 35.0%
AAAGTCACCTATATTACAGG+GGG + Chr5:83325916-83325897 None:intergenic 35.0%
ACATCTTGAACTTTCACTAG+AGG - Chr5:83326313-83326332 MsG0580028609.01.T01:intron 35.0%
ACCTGCAAAACAAATCTCAA+AGG - Chr5:83320644-83320663 MsG0580028609.01.T01:intron 35.0%
ACGAACTCAGCAAACAAAAA+CGG + Chr5:83319994-83320013 None:intergenic 35.0%
ACTCGACAAATAAAATCGCT+AGG + Chr5:83326439-83326458 None:intergenic 35.0%
AGAAAACGTAAAATCACCCT+AGG + Chr5:83319826-83319845 None:intergenic 35.0%
AGAAGAAATCAAATGGAACG+TGG + Chr5:83321863-83321882 None:intergenic 35.0%
AGAATTCCTGCAAAACTCTT+TGG + Chr5:83326718-83326737 None:intergenic 35.0%
AGATGATTCCATCGCTAAAT+AGG - Chr5:83322703-83322722 MsG0580028609.01.T01:intron 35.0%
ATCCTATGGTCAATCGATTA+GGG + Chr5:83322934-83322953 None:intergenic 35.0%
ATGACGGTTCAGTTATTATC+TGG - Chr5:83324037-83324056 MsG0580028609.01.T01:intron 35.0%
CAAATCTCAAAGGTTGAGAA+AGG - Chr5:83320654-83320673 MsG0580028609.01.T01:intron 35.0%
CACTTGTATTCATCATATGC+TGG - Chr5:83322039-83322058 MsG0580028609.01.T01:intron 35.0%
CCAAAAGTCACCTATATTAC+AGG - Chr5:83325894-83325913 MsG0580028609.01.T01:intron 35.0%
CCAAAAGTCACCTATATTAC+AGG + Chr5:83325913-83325894 None:intergenic 35.0%
CGCCATAAGAAGAAATCAAA+TGG + Chr5:83321870-83321889 None:intergenic 35.0%
CTAAACTACTAGCAGGTAAT+AGG - Chr5:83322093-83322112 MsG0580028609.01.T01:intron 35.0%
CTAGGGTTTAGACTGATTAT+TGG - Chr5:83323769-83323788 MsG0580028609.01.T01:intron 35.0%
CTCTTTATTCACTGATAACC+AGG - Chr5:83322609-83322628 MsG0580028609.01.T01:intron 35.0%
CTGGAAGTCATTAAGTCTTT+AGG - Chr5:83319674-83319693 MsG0580028609.01.T01:three_prime_UTR 35.0%
GAAAACGTAAAATCACCCTA+GGG + Chr5:83319825-83319844 None:intergenic 35.0%
GAATGAAGATGAAAAGGAAG+AGG + Chr5:83320939-83320958 None:intergenic 35.0%
GAGGACGCAAAGTAATTAAA+AGG - Chr5:83323312-83323331 MsG0580028609.01.T01:intron 35.0%
GCAAGAGAATGAAGATGAAA+AGG + Chr5:83320945-83320964 None:intergenic 35.0%
GGAAAACCTTGGTATTTAAG+TGG + Chr5:83321383-83321402 None:intergenic 35.0%
GGGTAGATTGAAAATGCTTT+AGG + Chr5:83326024-83326043 None:intergenic 35.0%
GTAAGGAATACTAGGATTCT+AGG - Chr5:83323751-83323770 MsG0580028609.01.T01:intron 35.0%
GTAGTATTTATAGCCTGCTA+TGG - Chr5:83323815-83323834 MsG0580028609.01.T01:intron 35.0%
GTTGCAAGTCTCTTAATCTA+AGG - Chr5:83326909-83326928 MsG0580028609.01.T01:intron 35.0%
GTTTAGTATGTATGTGCCTT+TGG - Chr5:83319772-83319791 MsG0580028609.01.T01:CDS 35.0%
GTTTCTAAACTTCATAGGAG+GGG + Chr5:83321191-83321210 None:intergenic 35.0%
TAGAGCTTGAAGATGAAACA+CGG + Chr5:83320691-83320710 None:intergenic 35.0%
TATAGATGGACAGCAAAGAT+TGG - Chr5:83326672-83326691 MsG0580028609.01.T01:intron 35.0%
TATGGAGAGCTCAAATTATG+TGG + Chr5:83322171-83322190 None:intergenic 35.0%
TCTGGACACATTACTTTCAA+AGG - Chr5:83327013-83327032 MsG0580028609.01.T01:intron 35.0%
TGAATTGTAACAATGTCACC+TGG - Chr5:83321799-83321818 MsG0580028609.01.T01:intron 35.0%
TTACAATTATGGGCGATTTG+CGG + Chr5:83323358-83323377 None:intergenic 35.0%
TTTAATTACTTTGCGTCCTC+AGG + Chr5:83323312-83323331 None:intergenic 35.0%
TTTCTAAACTTCATAGGAGG+GGG + Chr5:83321190-83321209 None:intergenic 35.0%
TTTGAATACATACTCCATGG+GGG + Chr5:83319856-83319875 None:intergenic 35.0%
! AGGTTTCTAGAAGCTTAGAT+GGG - Chr5:83323902-83323921 MsG0580028609.01.T01:intron 35.0%
! CCTGTAATATAGGTGACTTT+TGG - Chr5:83324245-83324264 MsG0580028609.01.T01:intron 35.0%
! CCTGTAATATAGGTGACTTT+TGG + Chr5:83324264-83324245 None:intergenic 35.0%
! GGAAGAGGAGTACAAAATAT+AGG + Chr5:83320924-83320943 None:intergenic 35.0%
! GTGACGAGTTGAATTCTTTA+TGG - Chr5:83319949-83319968 MsG0580028609.01.T01:CDS 35.0%
! TAAATAAGTCGCTGATTGTC+CGG + Chr5:83320192-83320211 None:intergenic 35.0%
! TACTTGCAAAAAGTACGGTA+AGG - Chr5:83323734-83323753 MsG0580028609.01.T01:intron 35.0%
! TTTAGGATCACACGAAAAAG+AGG + Chr5:83322745-83322764 None:intergenic 35.0%
!! ACAGGGGTATTTGTGTATTT+AGG - Chr5:83323869-83323888 MsG0580028609.01.T01:intron 35.0%
!! ATCTTCAAGCTCTAAATGGT+GGG - Chr5:83320697-83320716 MsG0580028609.01.T01:CDS 35.0%
!! CAGTTATTATCTGGTTCTTG+TGG - Chr5:83324046-83324065 MsG0580028609.01.T01:intron 35.0%
!! CATTCAGTATTCTAAAACGC+TGG - Chr5:83327110-83327129 MsG0580028609.01.T01:intron 35.0%
!! CTGCTATTTCTTATTTCCCT+CGG + Chr5:83322788-83322807 None:intergenic 35.0%
!! GTACTTTTTGCAAGTACAGT+TGG + Chr5:83323730-83323749 None:intergenic 35.0%
!! TTGTTTTGCAGGTTTCTAAC+AGG + Chr5:83320637-83320656 None:intergenic 35.0%
!! TTTGTTTGCTGAGTTCGTTT+TGG - Chr5:83319996-83320015 MsG0580028609.01.T01:intron 35.0%
!!! ACATTTTTGGTACAGCTTCT+TGG - Chr5:83326113-83326132 MsG0580028609.01.T01:intron 35.0%
!!! ACCTTTGAGATTTGTTTTGC+AGG + Chr5:83320648-83320667 None:intergenic 35.0%
!!! CAGCGTTTTAGAATACTGAA+TGG + Chr5:83327112-83327131 None:intergenic 35.0%
AAACAAAAAGCAGGGAGGAT+TGG + Chr5:83326074-83326093 None:intergenic 40.0%
AAACGTAAAATCACCCTAGG+GGG + Chr5:83319823-83319842 None:intergenic 40.0%
AAGAAAGCCATAACATGGTC+TGG + Chr5:83326625-83326644 None:intergenic 40.0%
AAGTGATGACAACATGGGAT+TGG - Chr5:83319645-83319664 MsG0580028609.01.T01:three_prime_UTR 40.0%
AATTAGGTTCACGAAGCATG+AGG - Chr5:83322857-83322876 MsG0580028609.01.T01:intron 40.0%
ACGTGACTCCTTTCAAAGAT+TGG + Chr5:83322374-83322393 None:intergenic 40.0%
ACTTTGGACCTATTTAGCGA+TGG + Chr5:83322714-83322733 None:intergenic 40.0%
AGAGCTCAAATTATGTGGTC+CGG + Chr5:83322166-83322185 None:intergenic 40.0%
AGCAACAGCACATTAACAAG+AGG + Chr5:83326567-83326586 None:intergenic 40.0%
ATAAGTCGCCAGCAACAAAT+AGG + Chr5:83320292-83320311 None:intergenic 40.0%
ATTTAGTCGAACCCTCTACA+AGG - Chr5:83320310-83320329 MsG0580028609.01.T01:CDS 40.0%
ATTTAGTCGAACCCTCTACA+GGG - Chr5:83320310-83320329 MsG0580028609.01.T01:CDS 40.0%
ATTTCTCATCTCCATCATCC+TGG + Chr5:83322630-83322649 None:intergenic 40.0%
CAAAAACGGGCGCAAATTTA+AGG + Chr5:83319980-83319999 None:intergenic 40.0%
CAACAGCACATTAACAAGAG+GGG + Chr5:83326565-83326584 None:intergenic 40.0%
CAAGCAAGAAAGCCATAACA+TGG + Chr5:83326630-83326649 None:intergenic 40.0%
CATAGCATATCGATGGATGT+TGG - Chr5:83323607-83323626 MsG0580028609.01.T01:intron 40.0%
CATCCTATGGTCAATCGATT+AGG + Chr5:83322935-83322954 None:intergenic 40.0%
CGAACTCAGCAAACAAAAAC+GGG + Chr5:83319993-83320012 None:intergenic 40.0%
CTCTTCCAAGAATACGACAA+AGG + Chr5:83323537-83323556 None:intergenic 40.0%
CTTGCAGACGTTCATACATT+TGG + Chr5:83326378-83326397 None:intergenic 40.0%
CTTGCTGAACTATGTACTAG+TGG - Chr5:83326646-83326665 MsG0580028609.01.T01:intron 40.0%
CTTTGTCGTATTCTTGGAAG+AGG - Chr5:83323535-83323554 MsG0580028609.01.T01:intron 40.0%
GAAAATTCACCTTCTCACAC+CGG + Chr5:83327058-83327077 None:intergenic 40.0%
GAACATAATCCAGATCTTGC+TGG - Chr5:83326158-83326177 MsG0580028609.01.T01:intron 40.0%
GATTCTGTCAAGGAAAACCT+TGG + Chr5:83321394-83321413 None:intergenic 40.0%
GCAACAGCACATTAACAAGA+GGG + Chr5:83326566-83326585 None:intergenic 40.0%
GCAATAAAGGGATTCTGTCA+AGG + Chr5:83321404-83321423 None:intergenic 40.0%
GTACTGTTACCTGATCTTTC+AGG - Chr5:83326587-83326606 MsG0580028609.01.T01:intron 40.0%
GTGATCCAATGGAAGAGAAT+TGG + Chr5:83325981-83326000 None:intergenic 40.0%
GTGCTATATCTGTTCGTGTA+TGG + Chr5:83322189-83322208 None:intergenic 40.0%
TATGCAGCTAAACTACTAGC+AGG - Chr5:83322086-83322105 MsG0580028609.01.T01:intron 40.0%
TATGTGGTCCGGATATTGAT+TGG + Chr5:83322155-83322174 None:intergenic 40.0%
TATTTAGTCGAACCCTCTAC+AGG - Chr5:83320309-83320328 MsG0580028609.01.T01:CDS 40.0%
TCAAGCCAATTCTCTTCCAT+TGG - Chr5:83325973-83325992 MsG0580028609.01.T01:intron 40.0%
TGACTGTCATAGCATATCGA+TGG - Chr5:83323600-83323619 MsG0580028609.01.T01:intron 40.0%
TGCTACTACTACGACATCAA+CGG + Chr5:83320566-83320585 None:intergenic 40.0%
TGTATGTAGCATTCAAACGC+TGG + Chr5:83327277-83327296 None:intergenic 40.0%
TGTTTGTTTAATCTCGCCCT+TGG - Chr5:83320765-83320784 MsG0580028609.01.T01:CDS 40.0%
TTCACTGATAACCAGGATGA+TGG - Chr5:83322616-83322635 MsG0580028609.01.T01:intron 40.0%
TTCTAAACTTCATAGGAGGG+GGG + Chr5:83321189-83321208 None:intergenic 40.0%
TTGGTTGTGAAGGGAAGATT+TGG - Chr5:83326691-83326710 MsG0580028609.01.T01:intron 40.0%
TTGTATTGGATGCAAGAGTC+TGG - Chr5:83326995-83327014 MsG0580028609.01.T01:intron 40.0%
! AACATGGGATTGGACTTTTC+TGG - Chr5:83319655-83319674 MsG0580028609.01.T01:three_prime_UTR 40.0%
! ACACAAGAGCATGACGAATT+TGG + Chr5:83321973-83321992 None:intergenic 40.0%
! ACAGCAAAGATTGGTTGTGA+AGG - Chr5:83326681-83326700 MsG0580028609.01.T01:intron 40.0%
! AGTTTTACCGTTCCCATAGA+CGG - Chr5:83323702-83323721 MsG0580028609.01.T01:intron 40.0%
! CAGCAAAGATTGGTTGTGAA+GGG - Chr5:83326682-83326701 MsG0580028609.01.T01:intron 40.0%
! CATATCGATGGATGTTGGTT+TGG - Chr5:83323612-83323631 MsG0580028609.01.T01:intron 40.0%
! CTAAGCTTCTAGAAACCTCT+AGG + Chr5:83323900-83323919 None:intergenic 40.0%
! GAAGTACCAAACAAAACCTG+AGG - Chr5:83323293-83323312 MsG0580028609.01.T01:intron 40.0%
! GAGGTTTCTAGAAGCTTAGA+TGG - Chr5:83323901-83323920 MsG0580028609.01.T01:intron 40.0%
! GCAACAAAACCAGCTTTGAT+TGG + Chr5:83327174-83327193 None:intergenic 40.0%
! GCTTTTACCCCCTGTAATAT+AGG - Chr5:83324235-83324254 MsG0580028609.01.T01:intron 40.0%
! GGCTTTTACCCCTGTAATAT+AGG + Chr5:83325907-83325926 None:intergenic 40.0%
! GGGGTATTTGTGTATTTAGG+CGG - Chr5:83323872-83323891 MsG0580028609.01.T01:intron 40.0%
! GTTGATATTCCGCGACTTTT+AGG - Chr5:83320140-83320159 MsG0580028609.01.T01:intron 40.0%
! TTTGGACCAAAGAGTTTTGC+AGG - Chr5:83326709-83326728 MsG0580028609.01.T01:intron 40.0%
!! AGAATTGGCTTGATCCAACA+AGG + Chr5:83325966-83325985 None:intergenic 40.0%
!! AGTCTTTAGGAAGGTTTTGG+TGG - Chr5:83319687-83319706 MsG0580028609.01.T01:exon 40.0%
!! CATCTTCAAGCTCTAAATGG+TGG - Chr5:83320696-83320715 MsG0580028609.01.T01:CDS 40.0%
!! TAACAAGAGGGGAAGTATTG+AGG + Chr5:83326554-83326573 None:intergenic 40.0%
!!! GTTTTTAGGGTTTGTGAGTG+TGG - Chr5:83323671-83323690 MsG0580028609.01.T01:intron 40.0%
!!! TTTTTTGATTGGGGTACACG+TGG - Chr5:83324426-83324445 MsG0580028609.01.T01:intron 40.0%
AAACTACTTTAGGTACCCCG+TGG + Chr5:83321459-83321478 None:intergenic 45.0%
AAAGCCATAACATGGTCTGG+CGG + Chr5:83326622-83326641 None:intergenic 45.0%
AAGGCGAAGTGATGACAACA+TGG - Chr5:83319639-83319658 MsG0580028609.01.T01:three_prime_UTR 45.0%
AATTATGCGACCACCTGTAG+AGG + Chr5:83320535-83320554 None:intergenic 45.0%
AATTATGGGCGATTTGCGGT+GGG + Chr5:83323354-83323373 None:intergenic 45.0%
ACACAAATACCCCTGTTGCT+TGG + Chr5:83323865-83323884 None:intergenic 45.0%
ACGATCTCGAACAAGATGAC+CGG + Chr5:83323644-83323663 None:intergenic 45.0%
AGAACCGTCTCTTCTTTCTC+CGG - Chr5:83327036-83327055 MsG0580028609.01.T01:intron 45.0%
AGCTGCCTTTGTCGTATTCT+TGG - Chr5:83323529-83323548 MsG0580028609.01.T01:intron 45.0%
AGGCGAAGTGATGACAACAT+GGG - Chr5:83319640-83319659 MsG0580028609.01.T01:three_prime_UTR 45.0%
AGGGTTTGTGAGTGTGGTAT+AGG - Chr5:83323677-83323696 MsG0580028609.01.T01:intron 45.0%
AGTAAGGCCAAATCATGCCT+CGG + Chr5:83327220-83327239 None:intergenic 45.0%
ATCCAGATCTTGCTGGAGAT+CGG - Chr5:83326165-83326184 MsG0580028609.01.T01:intron 45.0%
ATCGGCGAAGAACAGTTATG+AGG - Chr5:83326183-83326202 MsG0580028609.01.T01:intron 45.0%
ATTATGCGACCACCTGTAGA+GGG + Chr5:83320534-83320553 None:intergenic 45.0%
ATTATGCGACCACCTTGTAG+AGG + Chr5:83320325-83320344 None:intergenic 45.0%
CCTGGACCACTTAAATACCA+AGG - Chr5:83321374-83321393 MsG0580028609.01.T01:intron 45.0%
CCTTGGTATTTAAGTGGTCC+AGG + Chr5:83321377-83321396 None:intergenic 45.0%
CGAGTGATTATCATCACCCT+TGG - Chr5:83326454-83326473 MsG0580028609.01.T01:intron 45.0%
CGCGCTAGTCCTAATTTGAT+AGG + Chr5:83321550-83321569 None:intergenic 45.0%
CTACACTTCACTTTCTGCCA+CGG - Chr5:83321439-83321458 MsG0580028609.01.T01:intron 45.0%
CTCTCATACTTACTACGCAG+CGG + Chr5:83322275-83322294 None:intergenic 45.0%
CTGGTTTATTGCTTGCAGTG+TGG - Chr5:83327129-83327148 MsG0580028609.01.T01:intron 45.0%
GTATTCTTGGAAGAGGACAG+AGG - Chr5:83323542-83323561 MsG0580028609.01.T01:intron 45.0%
GTCATCTTGTTCGAGATCGT+CGG - Chr5:83323644-83323663 MsG0580028609.01.T01:intron 45.0%
GTCCCTAATCGATTGACCAT+AGG - Chr5:83322929-83322948 MsG0580028609.01.T01:intron 45.0%
TAAAACATCTGCCCGTCAGA+AGG + Chr5:83324118-83324137 None:intergenic 45.0%
TACACTTCACTTTCTGCCAC+GGG - Chr5:83321440-83321459 MsG0580028609.01.T01:intron 45.0%
TATTGCTTGCAGTGTGGATC+AGG - Chr5:83327135-83327154 MsG0580028609.01.T01:intron 45.0%
TCAGTTGCTCCAATCAAAGC+TGG - Chr5:83327162-83327181 MsG0580028609.01.T01:intron 45.0%
TCATCTTGTTCGAGATCGTC+GGG - Chr5:83323645-83323664 MsG0580028609.01.T01:intron 45.0%
TCGATGCATCCTGAAAGATC+AGG + Chr5:83326599-83326618 None:intergenic 45.0%
TGTATTTAGGCGGTTCCTAG+AGG - Chr5:83323882-83323901 MsG0580028609.01.T01:intron 45.0%
TTAGTCGAACTCGTTTAGGG+AGG - Chr5:83320209-83320228 MsG0580028609.01.T01:intron 45.0%
TTATAGCCTGCTATGGGCTT+GGG - Chr5:83323822-83323841 MsG0580028609.01.T01:intron 45.0%
TTATGCGACCACCTTGTAGA+GGG + Chr5:83320324-83320343 None:intergenic 45.0%
TTCCTGCACTATGCTCAACT+TGG - Chr5:83321995-83322014 MsG0580028609.01.T01:intron 45.0%
TTCGTGTGATCCTAAATCGC+TGG - Chr5:83322749-83322768 MsG0580028609.01.T01:intron 45.0%
TTGTTTAATCTCGCCCTTGG+CGG - Chr5:83320768-83320787 MsG0580028609.01.T01:CDS 45.0%
TTTATAGCCTGCTATGGGCT+TGG - Chr5:83323821-83323840 MsG0580028609.01.T01:intron 45.0%
TTTGGTACAGCTTCTTGGCA+GGG - Chr5:83326118-83326137 MsG0580028609.01.T01:intron 45.0%
! AGATCGTCGGGAAGGTTTTT+AGG - Chr5:83323657-83323676 MsG0580028609.01.T01:intron 45.0%
! CACAAATACCCCTGTTGCTT+GGG + Chr5:83323864-83323883 None:intergenic 45.0%
! GATCGTCGGGAAGGTTTTTA+GGG - Chr5:83323658-83323677 MsG0580028609.01.T01:intron 45.0%
! TACCAAGTTGAGCATAGTGC+AGG + Chr5:83322000-83322019 None:intergenic 45.0%
! TCTTGAGGTCCTTTAGAGAG+CGG - Chr5:83322667-83322686 MsG0580028609.01.T01:intron 45.0%
! TTTTGGTACAGCTTCTTGGC+AGG - Chr5:83326117-83326136 MsG0580028609.01.T01:intron 45.0%
!! TACTCTTGAGAGCATTCTCG+AGG + Chr5:83323798-83323817 None:intergenic 45.0%
!! TTAGTCGAACCCTTTTAGGG+TGG - Chr5:83320263-83320282 MsG0580028609.01.T01:CDS 45.0%
!!! ATTCCGCGACTTTTAGGTTG+TGG - Chr5:83320146-83320165 MsG0580028609.01.T01:intron 45.0%
!!! CAGTTTTCTTGGTGCCTTCA+CGG + Chr5:83326223-83326242 None:intergenic 45.0%
!!! TTGCGTCCTCAGGTTTTGTT+TGG + Chr5:83323302-83323321 None:intergenic 45.0%
!! AAAAAAAAAAAAAAAATTAC+TGG + Chr5:83326863-83326882 None:intergenic 5.0%
!! AAAAAAAAAATTAAAAATTC+TGG - Chr5:83324553-83324572 MsG0580028609.01.T01:intron 5.0%
!! AAAAAAAATTTAAAAAATTC+TGG - Chr5:83324469-83324488 MsG0580028609.01.T01:intron 5.0%
!! AAAAAAATATTAAAAAATTC+GGG + Chr5:83324620-83324601 None:intergenic 5.0%
!! AAAAAAATATTAAAAAATTC+TGG - Chr5:83324601-83324620 MsG0580028609.01.T01:intron 5.0%
!! AAAAAAATATTAAAAAATTC+TGG + Chr5:83324620-83324601 None:intergenic 5.0%
!! AAAAAATTAATAAAAAATTC+TGG - Chr5:83324499-83324518 MsG0580028609.01.T01:intron 5.0%
!! AATGAAAAAATTTAAAAAAA+CGG + Chr5:83325534-83325553 None:intergenic 5.0%
!! ATAAAAAAATTAAAATATTC+TGG - Chr5:83324787-83324806 MsG0580028609.01.T01:intron 5.0%
!! CAATAAATTATATTATAAAT+TGG - Chr5:83326337-83326356 MsG0580028609.01.T01:intron 5.0%
!! CAATTTATAATATAATTTAT+TGG + Chr5:83326339-83326358 None:intergenic 5.0%
!!! AATATTTTTATTTTTTGATT+GGG - Chr5:83324416-83324435 MsG0580028609.01.T01:intron 5.0%
!!! TAATATTTTTATTTTTTGAT+TGG - Chr5:83324415-83324434 MsG0580028609.01.T01:intron 5.0%
!!! TTATTTTTTATTTTTTATTG+GGG + Chr5:83325717-83325736 None:intergenic 5.0%
!!! TTCTAAAAAAATTAAAATTA+TGG + Chr5:83325351-83325370 None:intergenic 5.0%
AAATAGGCGGCCACCCTAAA+AGG + Chr5:83320276-83320295 None:intergenic 50.0%
AAATCGCTGGCAGAAGCTGT+AGG - Chr5:83322762-83322781 MsG0580028609.01.T01:intron 50.0%
AATAGGCGGCCACCCTAAAA+GGG + Chr5:83320275-83320294 None:intergenic 50.0%
ACACCGTAACCGCTCTCTAA+AGG + Chr5:83322679-83322698 None:intergenic 50.0%
ACACTTCACTTTCTGCCACG+GGG - Chr5:83321441-83321460 MsG0580028609.01.T01:intron 50.0%
ACAGCTTCTGCCAGCGATTT+AGG + Chr5:83322762-83322781 None:intergenic 50.0%
ACGACCACGACAACAACAAC+AGG + Chr5:83321624-83321643 None:intergenic 50.0%
AGGAATGCCGAGGCATGATT+TGG - Chr5:83327210-83327229 MsG0580028609.01.T01:CDS 50.0%
AGGACAGAGGAATCATGACG+AGG - Chr5:83323555-83323574 MsG0580028609.01.T01:intron 50.0%
AGGCTTAGAAGCCTCCAGAA+AGG + Chr5:83319570-83319589 None:intergenic 50.0%
AGGTCTTAGAGCCTTTCTGG+AGG - Chr5:83319556-83319575 MsG0580028609.01.T01:three_prime_UTR 50.0%
AGTCAGCAGAATCTCCTACG+TGG - Chr5:83324348-83324367 MsG0580028609.01.T01:intron 50.0%
AGTCAGCAGAATCTCCTACG+TGG + Chr5:83324367-83324348 None:intergenic 50.0%
AGTCGCCAGCAACAAATAGG+CGG + Chr5:83320289-83320308 None:intergenic 50.0%
ATCTGAGCTGACACAGTCAC+CGG + Chr5:83320106-83320125 None:intergenic 50.0%
ATTATGCGACCACCCTGTAG+AGG + Chr5:83320430-83320449 None:intergenic 50.0%
CAATTATGGGCGATTTGCGG+TGG + Chr5:83323355-83323374 None:intergenic 50.0%
CACACCGGAGAAAGAAGAGA+CGG + Chr5:83327043-83327062 None:intergenic 50.0%
CCAACAACGTCCGGAAAGAA+TGG + Chr5:83322564-83322583 None:intergenic 50.0%
CCATTCTTTCCGGACGTTGT+TGG - Chr5:83322561-83322580 MsG0580028609.01.T01:intron 50.0%
CTGGAGGCTTCTAAGCCTTT+AGG - Chr5:83319572-83319591 MsG0580028609.01.T01:three_prime_UTR 50.0%
CTTAGATGGGCGATGCCTTA+AGG - Chr5:83323915-83323934 MsG0580028609.01.T01:intron 50.0%
CTTCTTTCTCCGGTGTGAGA+AGG - Chr5:83327046-83327065 MsG0580028609.01.T01:intron 50.0%
GAACTTGGAGAAACCCCCTA+GGG - Chr5:83319807-83319826 MsG0580028609.01.T01:intron 50.0%
GATGTCGTAGTAGTAGCACC+TGG - Chr5:83320568-83320587 MsG0580028609.01.T01:intron 50.0%
GGAATCATGACGAGGTTGAG+AGG - Chr5:83323563-83323582 MsG0580028609.01.T01:intron 50.0%
GGCTCATGCTTCCTCCAAAA+GGG + Chr5:83319529-83319548 None:intergenic 50.0%
GGTCTTAGAGCCTTTCTGGA+GGG - Chr5:83319557-83319576 MsG0580028609.01.T01:three_prime_UTR 50.0%
GTCAGCAGATTATGCTGACG+TGG - Chr5:83324379-83324398 MsG0580028609.01.T01:intron 50.0%
TAGTCGAACCCTCTACAAGG+TGG - Chr5:83320313-83320332 MsG0580028609.01.T01:CDS 50.0%
TCATACTTACTACGCAGCGG+TGG + Chr5:83322272-83322291 None:intergenic 50.0%
TGAACTTGGAGAAACCCCCT+AGG - Chr5:83319806-83319825 MsG0580028609.01.T01:intron 50.0%
TGCTTGGTTCCCAAGCAACA+GGG - Chr5:83323852-83323871 MsG0580028609.01.T01:intron 50.0%
TGGAGGGCTTCTAAGCCTTT+AGG - Chr5:83324007-83324026 MsG0580028609.01.T01:intron 50.0%
TGGAGGTCTTAGAGCCTTTC+TGG - Chr5:83319553-83319572 MsG0580028609.01.T01:three_prime_UTR 50.0%
TGTTTAATCTCGCCCTTGGC+GGG - Chr5:83320769-83320788 MsG0580028609.01.T01:CDS 50.0%
TTAGTCGAACCCTCTACAGG+TGG - Chr5:83320417-83320436 MsG0580028609.01.T01:intron 50.0%
TTATGCGACCACCCTGTAGA+GGG + Chr5:83320429-83320448 None:intergenic 50.0%
TTCTTTCCGGACGTTGTTGG+CGG - Chr5:83322564-83322583 MsG0580028609.01.T01:intron 50.0%
TTGCTTGGTTCCCAAGCAAC+AGG - Chr5:83323851-83323870 MsG0580028609.01.T01:intron 50.0%
TTGTCCCAAGACTCGTGCTT+GGG + Chr5:83319621-83319640 None:intergenic 50.0%
! GGTCCTTTAGAGAGCGGTTA+CGG - Chr5:83322673-83322692 MsG0580028609.01.T01:intron 50.0%
! GTTGCCTGTTGTTGTTGTCG+TGG - Chr5:83321617-83321636 MsG0580028609.01.T01:intron 50.0%
! GTTTTCTTCGAAGACCCCCA+TGG - Chr5:83319839-83319858 MsG0580028609.01.T01:intron 50.0%
! TGATCCTTGTCTGGGGTTGT+TGG - Chr5:83321891-83321910 MsG0580028609.01.T01:intron 50.0%
!! AAGGCTCTAAGACCTCCAGA+AGG + Chr5:83319551-83319570 None:intergenic 50.0%
!! ACTGTTTTGGGCCTTCTGAC+GGG - Chr5:83324104-83324123 MsG0580028609.01.T01:intron 50.0%
!! AGGCTCTAAGACCTCCAGAA+GGG + Chr5:83319550-83319569 None:intergenic 50.0%
!! GACTGTTTTGGGCCTTCTGA+CGG - Chr5:83324103-83324122 MsG0580028609.01.T01:intron 50.0%
!! GATGTTGGTTTGGTCTTCGC+CGG - Chr5:83323622-83323641 MsG0580028609.01.T01:intron 50.0%
!! GGAGATTCTGCTGACTCAAC+TGG - Chr5:83325797-83325816 MsG0580028609.01.T01:intron 50.0%
!! GGAGATTCTGCTGACTCAAC+TGG + Chr5:83325816-83325797 None:intergenic 50.0%
!! TATGGCGCTGATCCTTGTCT+GGG - Chr5:83321883-83321902 MsG0580028609.01.T01:intron 50.0%
!! TTATGGCGCTGATCCTTGTC+TGG - Chr5:83321882-83321901 MsG0580028609.01.T01:intron 50.0%
!!! GACTTTTGGTTTTGCCCCCT+GGG + Chr5:83324278-83324259 None:intergenic 50.0%
!!! GCTGGTTTTGTTGCTCGTGT+TGG - Chr5:83327180-83327199 MsG0580028609.01.T01:intron 50.0%
!!! GGTTTTGTTGCTCGTGTTGG+CGG - Chr5:83327183-83327202 MsG0580028609.01.T01:intron 50.0%
!!! TGACTTTTGGTTTTGCCCCC+TGG + Chr5:83324277-83324258 None:intergenic 50.0%
AAGGGGTTCCCAGGAAAGAG+AGG - Chr5:83321344-83321363 MsG0580028609.01.T01:intron 55.0%
AATCTCCTACGTGGCACGCT+AGG + Chr5:83325784-83325803 None:intergenic 55.0%
AGTACAGTTGGCGCCGTCTA+TGG + Chr5:83323718-83323737 None:intergenic 55.0%
AGTCTTGGGACAAGGCGAAG+TGG - Chr5:83319628-83319647 MsG0580028609.01.T01:three_prime_UTR 55.0%
CAAAAGGGCTCCTGAGACTC+CGG + Chr5:83319514-83319533 None:intergenic 55.0%
CAAGCACGAGTCTTGGGACA+AGG - Chr5:83319620-83319639 MsG0580028609.01.T01:three_prime_UTR 55.0%
CCTGCTATGGGCTTGGGTTT+CGG - Chr5:83323828-83323847 MsG0580028609.01.T01:intron 55.0%
CTTGTCCCAAGACTCGTGCT+TGG + Chr5:83319622-83319641 None:intergenic 55.0%
CTTGTTCGAGATCGTCGGGA+AGG - Chr5:83323649-83323668 MsG0580028609.01.T01:intron 55.0%
GAACACGGCTCGTGATCCAA+TGG + Chr5:83325992-83326011 None:intergenic 55.0%
GCGCCACAACCTAAAAGTCG+CGG + Chr5:83320152-83320171 None:intergenic 55.0%
GCTGTCAAAACTCCGAGCGT+CGG + Chr5:83323512-83323531 None:intergenic 55.0%
GCTTGGTTCCCAAGCAACAG+GGG - Chr5:83323853-83323872 MsG0580028609.01.T01:intron 55.0%
GGCTTAGAAGCCCTCCAGAA+AGG + Chr5:83324004-83324023 None:intergenic 55.0%
GGGCTCATGCTTCCTCCAAA+AGG + Chr5:83319530-83319549 None:intergenic 55.0%
GGTGCATAAAAGGGGTTCCC+AGG - Chr5:83321335-83321354 MsG0580028609.01.T01:intron 55.0%
GGTTCCCAGGAAAGAGAGGT+GGG - Chr5:83321348-83321367 MsG0580028609.01.T01:intron 55.0%
GTACAGTTGGCGCCGTCTAT+GGG + Chr5:83323717-83323736 None:intergenic 55.0%
GTCAGCAGATTCTGCTGACG+TGG + Chr5:83325762-83325781 None:intergenic 55.0%
GTGACCCACCTCTCTTTCCT+GGG + Chr5:83321355-83321374 None:intergenic 55.0%
TACTTACTACGCAGCGGTGG+CGG + Chr5:83322269-83322288 None:intergenic 55.0%
TAGTCGAACCCTCTACAGGG+TGG - Chr5:83320418-83320437 MsG0580028609.01.T01:intron 55.0%
TCGACCGCCAGACCATGTTA+TGG - Chr5:83326615-83326634 MsG0580028609.01.T01:intron 55.0%
TCTCAACCGCCAACAACGTC+CGG + Chr5:83322573-83322592 None:intergenic 55.0%
TGTCCCAAGACTCGTGCTTG+GGG + Chr5:83319620-83319639 None:intergenic 55.0%
! AGTCTCAGGAGCCCTTTTGG+AGG - Chr5:83319515-83319534 MsG0580028609.01.T01:three_prime_UTR 55.0%
! AGTCTCAGGAGCCCTTTTGG+GGG - Chr5:83319515-83319534 MsG0580028609.01.T01:three_prime_UTR 55.0%
! GAGTCTCAGGAGCCCTTTTG+GGG - Chr5:83319514-83319533 MsG0580028609.01.T01:three_prime_UTR 55.0%
! GGAGTCTCAGGAGCCCTTTT+GGG - Chr5:83319513-83319532 MsG0580028609.01.T01:three_prime_UTR 55.0%
!! AAAACTCCGAGCGTCGGTTG+CGG + Chr5:83323506-83323525 None:intergenic 55.0%
!! ATGGCGCTGATCCTTGTCTG+GGG - Chr5:83321884-83321903 MsG0580028609.01.T01:intron 55.0%
!! CTGCTGACTCAACTGGCTCA+GGG - Chr5:83325804-83325823 MsG0580028609.01.T01:intron 55.0%
!! CTGCTGACTCAACTGGCTCA+GGG + Chr5:83325823-83325804 None:intergenic 55.0%
!! TCTGCTGACTCAACTGGCTC+AGG - Chr5:83325803-83325822 MsG0580028609.01.T01:intron 55.0%
!! TCTGCTGACTCAACTGGCTC+AGG + Chr5:83325822-83325803 None:intergenic 55.0%
!! TGCTGACTCAACTGGCTCAG+GGG - Chr5:83325805-83325824 MsG0580028609.01.T01:intron 55.0%
!! TGCTGACTCAACTGGCTCAG+GGG + Chr5:83325824-83325805 None:intergenic 55.0%
AATCTCCTACGTGGCACGCG+AGG - Chr5:83324357-83324376 MsG0580028609.01.T01:intron 60.0%
AGCCCCCAAGCACGAGTCTT+GGG - Chr5:83319614-83319633 MsG0580028609.01.T01:three_prime_UTR 60.0%
ATGCCTTAAGGCGAGCACGC+CGG - Chr5:83319492-83319511 MsG0580028609.01.T01:three_prime_UTR 60.0%
CAGGCCAACAACCCCAGACA+AGG + Chr5:83321898-83321917 None:intergenic 60.0%
CCGAAACCCAAGCCCATAGC+AGG + Chr5:83323831-83323850 None:intergenic 60.0%
CGCCGATCTCCAGCAAGATC+TGG + Chr5:83326170-83326189 None:intergenic 60.0%
GAAGGCAAACAGCCCGCCAA+GGG + Chr5:83320784-83320803 None:intergenic 60.0%
GGAAAGAGAGGTGGGTCACC+TGG - Chr5:83321356-83321375 MsG0580028609.01.T01:intron 60.0%
GGGCTTGGGTTTCGGTTGCT+TGG - Chr5:83323836-83323855 MsG0580028609.01.T01:intron 60.0%
GGGTTCCCAGGAAAGAGAGG+TGG - Chr5:83321347-83321366 MsG0580028609.01.T01:intron 60.0%
GGTGACCCACCTCTCTTTCC+TGG + Chr5:83321356-83321375 None:intergenic 60.0%
GTCCCAAGACTCGTGCTTGG+GGG + Chr5:83319619-83319638 None:intergenic 60.0%
GTTCAGACGACAGCGCCCAA+AGG + Chr5:83319791-83319810 None:intergenic 60.0%
GTTGGCGCCGTCTATGGGAA+CGG + Chr5:83323712-83323731 None:intergenic 60.0%
TCCCAAGACTCGTGCTTGGG+GGG + Chr5:83319618-83319637 None:intergenic 60.0%
TGGCAGAAGCTGTAGGCCGA+GGG - Chr5:83322769-83322788 MsG0580028609.01.T01:intron 60.0%
! CGGAGTCTCAGGAGCCCTTT+TGG - Chr5:83319512-83319531 MsG0580028609.01.T01:three_prime_UTR 60.0%
! GCTGACTCAACTGGCTCAGG+GGG - Chr5:83325806-83325825 MsG0580028609.01.T01:intron 60.0%
! GCTGACTCAACTGGCTCAGG+GGG + Chr5:83325825-83325806 None:intergenic 60.0%
! GGAAGCATGAGCCCTTCTGG+AGG - Chr5:83319536-83319555 MsG0580028609.01.T01:three_prime_UTR 60.0%
! GGAGGAAGCATGAGCCCTTC+TGG - Chr5:83319533-83319552 MsG0580028609.01.T01:three_prime_UTR 60.0%
! GGTGGCCGCCTATTTGTTGC+TGG - Chr5:83320281-83320300 MsG0580028609.01.T01:CDS 60.0%
! TGGGCGCTGTCGTCTGAACT+TGG - Chr5:83319792-83319811 MsG0580028609.01.T01:CDS 60.0%
! TTGCTCGTGTTGGCGGCAGA+AGG - Chr5:83327190-83327209 MsG0580028609.01.T01:CDS 60.0%
ACTCCGGCGTGCTCGCCTTA+AGG + Chr5:83319498-83319517 None:intergenic 65.0%
AGCCCCCCAAGCACGAGTCT+TGG - Chr5:83319715-83319734 MsG0580028609.01.T01:CDS 65.0%
AGGGCTCATGCGCCCCCAAA+AGG + Chr5:83323965-83323984 None:intergenic 65.0%
ATCCCTCCGCAACCGACGCT+CGG - Chr5:83323497-83323516 MsG0580028609.01.T01:intron 65.0%
CAGCCCCCAAGCACGAGTCT+TGG - Chr5:83319613-83319632 MsG0580028609.01.T01:three_prime_UTR 65.0%
CCTCCTCGAGTTCGCCGTGA+AGG - Chr5:83326206-83326225 MsG0580028609.01.T01:intron 65.0%
CCTTCACGGCGAACTCGAGG+AGG + Chr5:83326209-83326228 None:intergenic 65.0%
CTGGCAGAAGCTGTAGGCCG+AGG - Chr5:83322768-83322787 MsG0580028609.01.T01:intron 65.0%
GCCCCCCAAGCACGAGTCTT+GGG - Chr5:83319716-83319735 MsG0580028609.01.T01:CDS 65.0%
GCTGACCTAGCGTGCCACGT+AGG - Chr5:83325776-83325795 MsG0580028609.01.T01:intron 65.0%
GGAAGGCAAACAGCCCGCCA+AGG + Chr5:83320785-83320804 None:intergenic 65.0%
GGGCTCATGCGCCCCCAAAA+GGG + Chr5:83323964-83323983 None:intergenic 65.0%
GTGCCTTCACGGCGAACTCG+AGG + Chr5:83326212-83326231 None:intergenic 65.0%
TGGCGGCAGAAGGAATGCCG+AGG - Chr5:83327200-83327219 MsG0580028609.01.T01:CDS 65.0%
CGTGCTTGGGGGGCTGTGAG+TGG + Chr5:83319895-83319914 None:intergenic 70.0%
GCTGACCTCGCGTGCCACGT+AGG + Chr5:83324365-83324384 None:intergenic 70.0%
GGGCGCATGAGCCCTTCTGG+AGG - Chr5:83323970-83323989 MsG0580028609.01.T01:intron 70.0%
! TGGGGGCGCATGAGCCCTTC+TGG - Chr5:83323967-83323986 MsG0580028609.01.T01:intron 70.0%
!! ACTCCGAGCGTCGGTTGCGG+AGG + Chr5:83323503-83323522 None:intergenic 70.0%
!! CTCCGAGCGTCGGTTGCGGA+GGG + Chr5:83323502-83323521 None:intergenic 70.0%
GGCGAGCACGCCGGAGTCTC+AGG - Chr5:83319501-83319520 MsG0580028609.01.T01:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 83319485 83327481 83319485 ID=MsG0580028609.01;Name=MsG0580028609.01
Chr5 mRNA 83319485 83327481 83319485 ID=MsG0580028609.01.T01;Parent=MsG0580028609.01;Name=MsG0580028609.01.T01;_AED=0.49;_eAED=0.67;_QI=0|0.5|0.4|1|0.75|0.8|5|217|283
Chr5 exon 83319485 83319819 83319485 ID=MsG0580028609.01.T01:exon:21453;Parent=MsG0580028609.01.T01
Chr5 exon 83319909 83319984 83319909 ID=MsG0580028609.01.T01:exon:21452;Parent=MsG0580028609.01.T01
Chr5 exon 83320215 83320357 83320215 ID=MsG0580028609.01.T01:exon:21451;Parent=MsG0580028609.01.T01
Chr5 exon 83320693 83320915 83320693 ID=MsG0580028609.01.T01:exon:21450;Parent=MsG0580028609.01.T01
Chr5 exon 83327190 83327481 83327190 ID=MsG0580028609.01.T01:exon:21449;Parent=MsG0580028609.01.T01
Chr5 CDS 83327190 83327481 83327190 ID=MsG0580028609.01.T01:cds;Parent=MsG0580028609.01.T01
Chr5 CDS 83320693 83320915 83320693 ID=MsG0580028609.01.T01:cds;Parent=MsG0580028609.01.T01
Chr5 CDS 83320215 83320357 83320215 ID=MsG0580028609.01.T01:cds;Parent=MsG0580028609.01.T01
Chr5 CDS 83319909 83319984 83319909 ID=MsG0580028609.01.T01:cds;Parent=MsG0580028609.01.T01
Chr5 CDS 83319702 83319819 83319702 ID=MsG0580028609.01.T01:cds;Parent=MsG0580028609.01.T01
Chr5 three_prime_UTR 83319485 83319701 83319485 ID=MsG0580028609.01.T01:three_prime_utr;Parent=MsG0580028609.01.T01
Gene Sequence

>MsG0580028609.01.T01

ATGGGTGATGCCTTAAGGCGAGCACGCCGGAGTCTCAGGAGCCCTTTTGGAGGAAGCATGAGCCCTTCTGGAGGTCTTAGAGCCTTTCTGGAGGCTTCTAAGCCTTTAGGAATATTTATGACGGTTCACAGCCCCCAAGCACGAGTCTTGGGACAAGGCGAAGTGATGACAACATGGGATTGGACTTTTCTGGAAGTCATTAAGTCTTTAGGAAGGTTTTGGTGGTTCACAGCCCCCCAAGCACGAGTCTTGGGACAAGGCGAAGTGTTTGAATTGCTCAATGCTCTGTTTATTATTACTTGGAAATTGCTTCCAATCCTCCCTGCTTTTTGTTTTTTTTTCTTGTGGATTCTAACATTTTTGGTACAGCTTCTTGGCAGGGTGTTCAACATACTACGTGAACATAATCCAGATCTTGCTGGAGATCGGCGAAGAACAGTTATGAGGCCTCCTCGAGTTCGCCGTGAAGGCACCAAGAAAACTGTGTTTGTGAATTTTATGGCACTATACTCATCGATGCATCGACCGCCAGACCATGTTATGGCTTTCTTGCTTGCTGAACTATGTACTAGTGGTTATATAGATGGACAGCAAAGATTGGTTGTGAAGGGAAGATTTGGACCAAAGAGTTTTGCAGGAATTCTCCGACGATATATCAATGAATATGTCATTTGTATTGGATGCAAGAGTCTGGACACATTACTTTCAAAGGAGAACCGTCTCTTCTTTCTCCGTGTGGATCAGGAAGATCAGTTGCTCCAATCAAAGCTGGTTTTGTTGCTCGTGTTGGCGGCAGAAGGAATGCCGAGGCATGATTTGGCCTTACTTTTTATTTGTGTTGAAATTGATTAG
Protein sequence

>MsG0580028609.01.T01

MGDALRRARRSLRSPFGGSMSPSGGLRAFLEASKPLGIFMTVHSPQARVLGQGEVMTTWDWTFLEVIKSLGRFWWFTAPQARVLGQGEVFELLNALFIITWKLLPILPAFCFFFLWILTFLVQLLGRVFNILREHNPDLAGDRRRTVMRPPRVRREGTKKTVFVNFMALYSSMHRPPDHVMAFLLAELCTSGYIDGQQRLVVKGRFGPKSFAGILRRYINEYVICIGCKSLDTLLSKENRLFFLRVDQEDQLLQSKLVLLLVLAAEGMPRHDLALLFICVEID*