AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010002.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010002.01.T01 MTR_2g075950 99.539 217 1 0 1 217 1 217 2.66e-160 441
MsG0280010002.01.T01 MTR_2g083860 82.110 218 38 1 1 217 1 218 1.10e-127 359
MsG0280010002.01.T01 MTR_2g014990 78.539 219 43 3 1 217 1 217 1.98e-125 353
MsG0280010002.01.T01 MTR_4g088090 78.082 219 44 3 1 217 1 217 6.19e-125 352
MsG0280010002.01.T01 MTR_4g079350 76.712 219 47 3 1 217 1 217 1.57e-124 351
MsG0280010002.01.T01 MTR_2g090865 75.472 212 49 3 7 217 5 214 8.31e-117 332
MsG0280010002.01.T01 MTR_4g064897 68.224 214 67 1 4 217 3 215 4.43e-109 312
MsG0280010002.01.T01 MTR_3g069510 65.421 214 74 0 3 216 2 215 5.41e-105 301
MsG0280010002.01.T01 MTR_2g005510 67.925 212 67 1 7 217 9 220 6.17e-103 296
MsG0280010002.01.T01 MTR_8g089985 59.641 223 72 3 6 217 10 225 1.11e-92 271
MsG0280010002.01.T01 MTR_1g052475 60.952 210 77 3 11 215 13 222 3.89e-92 269
MsG0280010002.01.T01 MTR_0262s0050 59.420 207 82 1 11 215 13 219 1.08e-90 266
MsG0280010002.01.T01 MTR_3g086980 59.174 218 85 4 2 215 4 221 2.32e-90 265
MsG0280010002.01.T01 MTR_6g079550 57.619 210 89 0 7 216 6 215 5.06e-86 254
MsG0280010002.01.T01 MTR_8g027220 55.963 218 88 3 4 216 17 231 2.12e-83 248
MsG0280010002.01.T01 MTR_7g405790 65.116 172 60 0 12 183 14 185 6.22e-81 241
MsG0280010002.01.T01 MTR_8g036220 52.423 227 97 4 1 216 1 227 7.34e-80 238
MsG0280010002.01.T01 MTR_1g078200 53.774 212 92 2 11 216 12 223 6.12e-78 233
MsG0280010002.01.T01 MTR_7g051940 61.628 172 66 0 12 183 12 183 2.45e-76 229
MsG0280010002.01.T01 MTR_8g107070 55.340 206 91 1 7 211 8 213 5.00e-73 222
MsG0280010002.01.T01 MTR_7g117910 47.926 217 93 2 5 217 12 212 6.14e-67 205
MsG0280010002.01.T01 MTR_2g027660 46.009 213 105 2 10 216 3 211 7.17e-64 197
MsG0280010002.01.T01 MTR_6g021790 53.293 167 78 0 10 176 3 169 1.21e-61 191
MsG0280010002.01.T01 MTR_7g081700 46.411 209 102 2 9 217 4 202 8.18e-59 184
MsG0280010002.01.T01 MTR_8g006970 47.596 208 98 3 11 217 20 217 9.84e-58 182
MsG0280010002.01.T01 MTR_8g031660 45.894 207 109 3 10 216 3 206 5.64e-57 179
MsG0280010002.01.T01 MTR_8g031870 52.532 158 75 0 12 169 5 162 2.22e-56 177
MsG0280010002.01.T01 MTR_8g006970 53.614 166 77 0 9 174 4 169 1.41e-55 175
MsG0280010002.01.T01 MTR_1g068740 43.925 214 115 2 5 217 7 216 2.31e-55 176
MsG0280010002.01.T01 MTR_1g115325 44.231 208 111 2 9 215 11 214 3.95e-55 175
MsG0280010002.01.T01 MTR_1g068730 43.458 214 116 2 5 217 7 216 7.89e-55 174
MsG0280010002.01.T01 MTR_7g100020 50.898 167 81 1 9 174 11 177 2.29e-53 171
MsG0280010002.01.T01 MTR_2g005500 41.905 210 113 2 6 215 2 202 3.68e-53 170
MsG0280010002.01.T01 MTR_8g031680 46.108 167 90 0 10 176 3 169 7.84e-53 169
MsG0280010002.01.T01 MTR_8g031830 43.689 206 103 4 12 216 5 198 1.31e-52 168
MsG0280010002.01.T01 MTR_1g094220 47.239 163 85 1 15 176 33 195 3.45e-50 162
MsG0280010002.01.T01 MTR_1g094220 47.468 158 82 1 15 171 33 190 5.36e-49 159
MsG0280010002.01.T01 MTR_1g068740 46.707 167 80 2 5 171 7 164 6.02e-49 159
MsG0280010002.01.T01 MTR_4g063160 42.791 215 105 6 9 215 11 215 6.49e-49 159
MsG0280010002.01.T01 MTR_1g068730 57.143 126 54 0 5 130 7 132 1.40e-48 157
MsG0280010002.01.T01 MTR_3g064390 39.806 206 103 3 15 216 12 200 1.93e-48 157
MsG0280010002.01.T01 MTR_1g094220 48.701 154 78 1 15 167 33 186 3.17e-48 157
MsG0280010002.01.T01 MTR_1g094220 47.561 164 84 2 15 177 33 195 4.24e-48 158
MsG0280010002.01.T01 MTR_2g096550 45.506 178 93 3 1 174 1 178 5.14e-48 157
MsG0280010002.01.T01 MTR_5g076590 39.806 206 103 3 15 216 12 200 1.62e-47 155
MsG0280010002.01.T01 MTR_2g102060 37.745 204 111 2 15 217 12 200 4.58e-47 154
MsG0280010002.01.T01 MTR_8g093740 41.148 209 112 5 9 215 9 208 1.53e-46 153
MsG0280010002.01.T01 MTR_4g099470 44.253 174 87 2 44 217 15 178 2.75e-46 151
MsG0280010002.01.T01 MTR_7g103070 44.498 209 107 4 10 216 13 214 6.35e-46 152
MsG0280010002.01.T01 MTR_1g029450 45.833 168 88 3 9 174 13 179 6.98e-45 149
MsG0280010002.01.T01 MTR_1g062760 43.269 208 108 5 10 215 11 210 1.76e-44 148
MsG0280010002.01.T01 MTR_1g090717 41.589 214 113 5 6 216 8 212 1.81e-44 148
MsG0280010002.01.T01 MTR_3g096350 40.476 210 112 6 9 215 8 207 2.78e-44 147
MsG0280010002.01.T01 MTR_8g103550 41.250 160 94 0 15 174 11 170 2.45e-43 144
MsG0280010002.01.T01 MTR_5g013900 37.580 157 98 0 14 170 10 166 2.49e-40 137
MsG0280010002.01.T01 MTR_4g098950 36.943 157 99 0 14 170 10 166 1.94e-39 135
MsG0280010002.01.T01 MTR_3g087160 35.669 157 101 0 14 170 10 166 2.60e-39 134
MsG0280010002.01.T01 MTR_8g090215 35.669 157 101 0 14 170 10 166 2.95e-39 134
MsG0280010002.01.T01 MTR_3g096350 46.980 149 74 4 9 154 8 154 7.23e-38 129
MsG0280010002.01.T01 MTR_3g096350 52.419 124 54 4 9 129 8 129 9.57e-38 129
MsG0280010002.01.T01 MTR_3g064390 47.414 116 61 0 15 130 12 127 1.36e-35 123
MsG0280010002.01.T01 MTR_8g092020 34.848 198 112 4 13 193 12 209 1.38e-35 125
MsG0280010002.01.T01 MTR_4g069850 33.971 209 119 7 13 214 8 204 1.33e-34 122
MsG0280010002.01.T01 MTR_4g012940 33.493 209 121 5 13 214 8 205 1.94e-34 122
MsG0280010002.01.T01 MTR_2g101890 33.971 209 120 5 13 214 10 207 2.09e-34 122
MsG0280010002.01.T01 MTR_1g097420 38.889 162 92 4 13 167 8 169 7.44e-34 120
MsG0280010002.01.T01 MTR_6g039490 37.195 164 92 3 13 167 8 169 4.13e-32 116
MsG0280010002.01.T01 MTR_7g103070 43.293 164 84 4 55 216 2 158 2.50e-31 112
MsG0280010002.01.T01 MTR_8g093740 38.506 174 97 4 44 215 10 175 5.57e-31 112
MsG0280010002.01.T01 MTR_1g069245 63.158 95 31 2 26 120 109 199 2.37e-30 112
MsG0280010002.01.T01 MTR_2g078000 97.959 49 1 0 74 122 46 94 1.23e-28 103
MsG0280010002.01.T01 MTR_1g097420 33.333 189 92 5 13 167 8 196 1.06e-27 105
MsG0280010002.01.T01 MTR_2g005500 30.952 210 96 5 6 215 2 162 2.20e-24 94.7
MsG0280010002.01.T01 MTR_3g107717 32.468 154 101 2 14 167 14 164 1.88e-23 94.0
MsG0280010002.01.T01 MTR_3g107707 32.468 154 101 2 14 167 14 164 2.00e-23 94.0
MsG0280010002.01.T01 MTR_3g107713 32.468 154 101 2 14 167 14 164 2.24e-23 94.0
MsG0280010002.01.T01 MTR_8g031810 44.660 103 43 1 12 114 5 93 2.59e-23 90.1
MsG0280010002.01.T01 MTR_2g078560 93.478 46 3 0 75 120 54 99 5.54e-23 94.7
MsG0280010002.01.T01 MTR_3g078260 30.387 181 112 5 13 181 8 186 7.39e-21 87.0
MsG0280010002.01.T01 MTR_4g088055 37.500 120 72 3 13 131 6 123 4.53e-20 84.3
MsG0280010002.01.T01 MTR_4g073250 38.333 120 71 3 13 131 6 123 8.06e-20 84.0
MsG0280010002.01.T01 MTR_1452s0010 41.772 79 46 0 33 111 1 79 1.04e-19 80.9
MsG0280010002.01.T01 MTR_6g087980 36.364 121 74 3 13 132 6 124 3.76e-19 82.4
MsG0280010002.01.T01 MTR_2g090875 36.667 120 73 3 13 131 6 123 4.13e-19 82.0
MsG0280010002.01.T01 MTR_5g022600 35.833 120 74 3 13 131 6 123 9.71e-19 80.9
MsG0280010002.01.T01 MTR_8g075240 35.833 120 74 3 13 131 6 123 3.58e-18 79.3
MsG0280010002.01.T01 MTR_4g113620 31.169 154 94 4 14 167 14 155 3.31e-17 77.0
MsG0280010002.01.T01 MTR_3g053480 55.172 58 23 1 1 55 1 58 1.39e-15 68.9
MsG0280010002.01.T01 MTR_3g078260 34.483 116 73 3 13 127 8 121 1.99e-15 70.9
MsG0280010002.01.T01 MTR_1g059590 33.526 173 105 5 10 182 428 590 4.46e-15 73.9
MsG0280010002.01.T01 MTR_1g059590 33.526 173 105 5 10 182 395 557 5.70e-15 73.6
MsG0280010002.01.T01 MTR_8g099250 55.172 58 23 1 1 55 1 58 9.88e-15 67.0
MsG0280010002.01.T01 MTR_1686s0010 31.522 92 63 0 33 124 1 92 1.75e-14 67.0
MsG0280010002.01.T01 MTR_5g092060 28.415 183 118 5 3 177 95 272 3.21e-14 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010002.01.T01 AT1G16920 88.018 217 25 1 1 217 1 216 1.77e-141 394
MsG0280010002.01.T01 AT5G45750 85.714 217 30 1 1 217 1 216 2.05e-137 384
MsG0280010002.01.T01 AT4G18800 83.410 217 33 2 1 217 1 214 2.40e-134 376
MsG0280010002.01.T01 AT1G06400 78.341 217 46 1 1 217 1 216 9.61e-128 359
MsG0280010002.01.T01 AT5G60860 76.256 219 48 3 1 217 1 217 3.83e-124 350
MsG0280010002.01.T01 AT3G15060 75.799 219 49 3 1 217 1 217 3.78e-123 348
MsG0280010002.01.T01 AT4G18430 72.936 218 55 2 1 216 1 216 4.75e-121 342
MsG0280010002.01.T01 AT1G28550 71.689 219 59 2 1 217 1 218 2.47e-120 340
MsG0280010002.01.T01 AT2G33870 71.233 219 60 2 1 217 1 218 1.37e-117 333
MsG0280010002.01.T01 AT1G07410 68.545 213 65 2 5 217 4 214 2.39e-107 308
MsG0280010002.01.T01 AT1G09630 68.692 214 65 2 5 217 4 216 2.99e-107 307
MsG0280010002.01.T01 AT5G59150 67.130 216 68 2 4 217 3 217 1.99e-102 295
MsG0280010002.01.T01 AT3G46830 67.130 216 68 2 4 217 3 217 1.70e-101 293
MsG0280010002.01.T01 AT3G46830 67.130 216 68 2 4 217 3 217 1.70e-101 293
MsG0280010002.01.T01 AT5G47960 63.810 210 73 1 11 217 13 222 1.42e-94 276
MsG0280010002.01.T01 AT3G12160 60.577 208 78 2 11 215 13 219 1.98e-92 270
MsG0280010002.01.T01 AT4G39990 60.185 216 70 3 11 217 15 223 7.72e-91 266
MsG0280010002.01.T01 AT5G65270 61.033 213 76 3 11 217 15 226 1.91e-89 263
MsG0280010002.01.T01 AT5G47520 56.757 222 90 4 1 217 1 221 2.09e-84 250
MsG0280010002.01.T01 AT2G43130 55.140 214 91 3 6 216 2 213 7.74e-81 240
MsG0280010002.01.T01 AT2G31680 54.839 217 80 3 11 217 10 218 4.04e-79 236
MsG0280010002.01.T01 AT1G18200 51.982 227 97 2 1 215 1 227 9.08e-78 233
MsG0280010002.01.T01 AT1G05810 55.814 215 80 4 11 217 10 217 9.09e-78 233
MsG0280010002.01.T01 AT3G07410 61.453 179 69 0 3 181 2 180 2.02e-77 232
MsG0280010002.01.T01 AT1G05810 55.814 215 80 4 11 217 56 263 2.68e-77 233
MsG0280010002.01.T01 AT1G73640 52.814 231 93 3 1 215 1 231 3.15e-77 232
MsG0280010002.01.T01 AT1G01200 54.460 213 88 4 11 216 26 236 7.12e-75 226
MsG0280010002.01.T01 AT5G59150 61.818 165 60 2 55 217 3 166 1.30e-67 205
MsG0280010002.01.T01 AT4G17170 46.009 213 105 2 10 216 3 211 9.34e-64 197
MsG0280010002.01.T01 AT4G17160 47.343 207 103 2 10 215 3 204 1.69e-62 194
MsG0280010002.01.T01 AT4G35860 53.293 167 78 0 10 176 3 169 1.43e-61 191
MsG0280010002.01.T01 AT1G02130 47.170 212 101 3 7 217 2 203 4.62e-60 187
MsG0280010002.01.T01 AT5G47200 45.972 211 104 2 7 217 2 202 1.03e-58 184
MsG0280010002.01.T01 AT4G17530 45.498 211 105 2 7 217 2 202 1.34e-58 184
MsG0280010002.01.T01 AT3G11730 43.750 208 110 1 8 215 3 203 2.09e-57 181
MsG0280010002.01.T01 AT5G03520 45.161 217 113 2 1 216 3 214 2.42e-55 176
MsG0280010002.01.T01 AT3G46060 51.534 163 78 1 9 170 11 173 2.98e-53 170
MsG0280010002.01.T01 AT3G46060 51.534 163 78 1 9 170 11 173 2.98e-53 170
MsG0280010002.01.T01 AT3G46060 51.534 163 78 1 9 170 11 173 2.98e-53 170
MsG0280010002.01.T01 AT3G09900 42.857 217 120 2 1 216 3 216 7.30e-53 169
MsG0280010002.01.T01 AT5G59840 50.299 167 82 1 9 174 11 177 1.08e-52 169
MsG0280010002.01.T01 AT5G45130 45.109 184 95 1 15 198 12 189 3.97e-52 167
MsG0280010002.01.T01 AT3G53610 49.701 167 83 1 9 174 11 177 6.50e-52 167
MsG0280010002.01.T01 AT3G53610 49.701 167 83 1 9 174 11 177 6.50e-52 167
MsG0280010002.01.T01 AT3G53610 49.701 167 83 1 9 174 11 177 6.50e-52 167
MsG0280010002.01.T01 AT4G19640 46.626 163 87 0 15 177 12 174 2.69e-51 165
MsG0280010002.01.T01 AT5G45130 45.055 182 94 1 17 198 22 197 4.20e-51 165
MsG0280010002.01.T01 AT1G43890 45.545 202 102 5 1 196 1 200 1.05e-50 164
MsG0280010002.01.T01 AT1G43890 45.545 202 102 5 1 196 1 200 1.05e-50 164
MsG0280010002.01.T01 AT1G43890 45.545 202 102 5 1 196 1 200 1.05e-50 164
MsG0280010002.01.T01 AT3G54840 47.853 163 84 1 15 176 35 197 1.20e-49 160
MsG0280010002.01.T01 AT3G54840 47.531 162 84 1 16 176 2 163 3.18e-49 159
MsG0280010002.01.T01 AT3G54840 49.351 154 77 1 15 167 35 188 3.58e-48 157
MsG0280010002.01.T01 AT5G03530 43.119 218 114 5 1 216 1 210 1.02e-46 154
MsG0280010002.01.T01 AT5G03530 43.119 218 114 5 1 216 1 210 1.02e-46 154
MsG0280010002.01.T01 AT4G35860 51.639 122 59 0 55 176 2 123 2.56e-42 141
MsG0280010002.01.T01 AT2G22290 36.306 157 100 0 14 170 10 166 3.71e-39 134
MsG0280010002.01.T01 AT5G03520 41.765 170 93 2 48 216 40 204 1.92e-38 132
MsG0280010002.01.T01 AT5G10260 35.669 157 101 0 14 170 10 166 2.47e-38 132
MsG0280010002.01.T01 AT4G39890 36.709 158 99 1 14 170 10 167 3.16e-38 132
MsG0280010002.01.T01 AT4G19640 46.565 131 70 0 15 145 12 142 3.85e-38 131
MsG0280010002.01.T01 AT2G44610 36.306 157 100 0 14 170 10 166 8.40e-38 130
MsG0280010002.01.T01 AT4G19640 47.200 125 66 0 15 139 12 136 1.39e-37 128
MsG0280010002.01.T01 AT3G09910 41.414 198 108 4 1 196 1 192 3.61e-37 129
MsG0280010002.01.T01 AT3G09910 41.414 198 108 4 1 196 1 192 3.61e-37 129
MsG0280010002.01.T01 AT3G09910 41.414 198 108 4 1 196 1 192 3.61e-37 129
MsG0280010002.01.T01 AT1G22740 40.123 162 90 3 13 167 8 169 3.77e-37 129
MsG0280010002.01.T01 AT5G64990 35.404 161 104 0 14 174 8 168 5.18e-37 129
MsG0280010002.01.T01 AT5G46025 58.491 106 43 1 75 179 6 111 9.87e-37 125
MsG0280010002.01.T01 AT3G09910 41.026 195 107 4 1 188 1 194 5.54e-36 125
MsG0280010002.01.T01 AT3G09910 41.026 195 107 4 1 188 1 194 5.54e-36 125
MsG0280010002.01.T01 AT3G18820 35.450 189 107 4 13 194 8 188 5.70e-35 123
MsG0280010002.01.T01 AT2G21880 38.788 165 94 3 13 170 9 173 7.60e-35 123
MsG0280010002.01.T01 AT1G52280 38.095 168 96 4 13 173 8 174 1.76e-34 122
MsG0280010002.01.T01 AT5G64990 33.929 168 104 1 14 174 8 175 2.74e-34 122
MsG0280010002.01.T01 AT3G16100 37.654 162 94 3 13 167 8 169 3.79e-33 119
MsG0280010002.01.T01 AT1G49300 36.527 167 99 3 13 172 8 174 8.04e-33 118
MsG0280010002.01.T01 AT1G49300 36.527 167 99 3 13 172 8 174 8.04e-33 118
MsG0280010002.01.T01 AT4G09720 35.758 165 99 2 13 170 8 172 2.04e-32 117
MsG0280010002.01.T01 AT5G39620 34.211 190 114 4 14 195 6 192 1.15e-31 115
MsG0280010002.01.T01 AT4G09720 34.118 170 100 2 13 170 8 177 4.40e-31 113
MsG0280010002.01.T01 AT4G09720 32.955 176 100 2 13 170 8 183 6.35e-30 110
MsG0280010002.01.T01 AT5G55080 35.256 156 94 3 14 167 14 164 2.31e-27 104
MsG0280010002.01.T01 AT2G21880 35.811 148 88 3 30 170 1 148 1.12e-25 99.0
MsG0280010002.01.T01 AT2G21880 35.811 148 88 3 30 170 1 148 1.12e-25 99.0
MsG0280010002.01.T01 AT2G21880 33.939 165 94 4 13 170 9 165 6.10e-25 97.4
MsG0280010002.01.T01 AT5G20020 32.468 154 101 2 14 167 14 164 2.09e-23 94.0
MsG0280010002.01.T01 AT5G55190 32.468 154 101 2 14 167 14 164 2.16e-23 94.0
MsG0280010002.01.T01 AT5G20010 32.468 154 101 2 14 167 14 164 2.18e-23 94.0
MsG0280010002.01.T01 AT4G08190 63.636 66 21 1 102 167 65 127 8.88e-22 87.0
MsG0280010002.01.T01 AT2G44690 32.222 180 108 5 13 180 18 195 1.32e-21 89.0
MsG0280010002.01.T01 AT4G09720 34.815 135 81 2 40 167 1 135 1.45e-21 87.8
MsG0280010002.01.T01 AT4G09720 34.815 135 81 2 40 167 1 135 1.45e-21 87.8
MsG0280010002.01.T01 AT4G09720 34.815 135 81 2 40 167 1 135 1.45e-21 87.8
MsG0280010002.01.T01 AT4G35020 34.132 167 96 5 13 167 6 170 1.61e-20 85.9
MsG0280010002.01.T01 AT4G35020 34.132 167 96 5 13 167 6 170 1.61e-20 85.9
MsG0280010002.01.T01 AT4G35020 34.132 167 96 5 13 167 6 170 1.61e-20 85.9
MsG0280010002.01.T01 AT4G28950 29.121 182 117 5 13 184 6 185 7.90e-20 84.3
MsG0280010002.01.T01 AT3G48040 29.949 197 120 6 13 197 8 198 1.94e-19 83.2
MsG0280010002.01.T01 AT1G75840 31.737 167 100 5 13 167 6 170 5.33e-19 81.6
MsG0280010002.01.T01 AT5G45970 37.500 120 72 3 13 131 6 123 7.82e-19 81.3
MsG0280010002.01.T01 AT1G20090 35.833 120 74 3 13 131 5 122 9.76e-19 80.9
MsG0280010002.01.T01 AT5G62880 29.545 176 110 5 13 176 8 181 4.44e-18 79.7
MsG0280010002.01.T01 AT2G17800 35.833 120 74 3 13 131 6 123 5.01e-18 79.0
MsG0280010002.01.T01 AT2G17800 35.833 120 74 3 13 131 6 123 5.01e-18 79.0
MsG0280010002.01.T01 AT4G35950 35.833 120 74 3 13 131 6 123 5.74e-18 79.0
MsG0280010002.01.T01 AT3G51300 36.441 118 72 3 15 131 8 123 5.98e-18 79.0
MsG0280010002.01.T01 AT4G35020 38.596 114 67 3 15 127 8 119 1.63e-17 76.6
MsG0280010002.01.T01 AT4G35020 38.596 114 67 3 15 127 8 119 1.63e-17 76.6
MsG0280010002.01.T01 AT3G48040 31.210 157 94 5 13 157 8 162 2.62e-17 76.6
MsG0280010002.01.T01 AT5G62880 35.000 120 75 3 13 131 8 125 4.16e-17 76.6

Find 42 sgRNAs with CRISPR-Local

Find 209 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAACACCAATGGTGGATT+TGG 0.236269 2:-62697849 None:intergenic
TGTTGATTCTAAAGTTATTA+AGG 0.259169 2:+62697892 MsG0280010002.01.T01:CDS
GAAAGAATCACTTTATTTCA+TGG 0.263251 2:+62701119 MsG0280010002.01.T01:CDS
GCTGTAGAGGGTGCTGAAAA+TGG 0.383578 2:+62701225 MsG0280010002.01.T01:CDS
GAAATAAAGTGATTCTTTCT+CGG 0.391175 2:-62701115 None:intergenic
AAGTTATTAAGGCTCAGATC+TGG 0.406315 2:+62697903 MsG0280010002.01.T01:CDS
AACATTGTTGTGATGCTTGT+TGG 0.427166 2:+62701033 MsG0280010002.01.T01:CDS
TTTCATGGAAACCTCAGCTC+TGG 0.442500 2:+62701134 MsG0280010002.01.T01:CDS
CGATCAGAACTACCTTGAAT+AGG 0.446974 2:-62697760 None:intergenic
GGTGAAACGAGAGAGAAGAT+TGG 0.454307 2:-62697804 None:intergenic
CGACTATGACTACCTATTCA+AGG 0.457570 2:+62697748 MsG0280010002.01.T01:CDS
CAGCTTTCTTGCTAACAATA+CGG 0.494643 2:-62701206 None:intergenic
CTTCCCATCTTCAGTTGATA+CGG 0.496302 2:-62701085 None:intergenic
CTGATCGGCGACTCCGGCGT+TGG 0.508206 2:+62697776 MsG0280010002.01.T01:CDS
GCTTACTATCGTGGGGCAGT+TGG 0.519994 2:+62700922 MsG0280010002.01.T01:CDS
CTTCAGTTGATACGGCTACA+AGG 0.532280 2:-62701077 None:intergenic
GTAGTTCTGATCGGCGACTC+CGG 0.534376 2:+62697770 MsG0280010002.01.T01:CDS
AGTTATTAAGGCTCAGATCT+GGG 0.536509 2:+62697904 MsG0280010002.01.T01:CDS
GGGATACTGCTGGTCAAGAA+AGG 0.537036 2:+62697924 MsG0280010002.01.T01:CDS
GTTTCAGCTTTGAAGAGAGT+TGG 0.538571 2:+62701297 MsG0280010002.01.T01:CDS
AACAAGCATCACAACAATGT+TGG 0.538592 2:-62701031 None:intergenic
CTTGAATCCAAATCCACCAT+TGG 0.540714 2:+62697842 MsG0280010002.01.T01:CDS
AACGCGTCTGTGCCAGCCAA+AGG 0.543390 2:+62701249 MsG0280010002.01.T01:CDS
ACGATAGTAAGCACTTGTAA+TGG 0.555075 2:-62700911 None:intergenic
GTAGCCGTATCAACTGAAGA+TGG 0.561123 2:+62701081 MsG0280010002.01.T01:CDS
GCTCAGATCTGGGATACTGC+TGG 0.571910 2:+62697914 MsG0280010002.01.T01:CDS
ATTACAAGTGCTTACTATCG+TGG 0.574326 2:+62700913 MsG0280010002.01.T01:CDS
TTACAAGTGCTTACTATCGT+GGG 0.574573 2:+62700914 MsG0280010002.01.T01:CDS
CATGGAAACCTCAGCTCTGG+AGG 0.574684 2:+62701137 MsG0280010002.01.T01:CDS
AGCGAATTCAACACCAATGG+TGG 0.577629 2:-62697855 None:intergenic
CTATTCAAGGTAGTTCTGAT+CGG 0.585029 2:+62697761 MsG0280010002.01.T01:CDS
TGTTAGCAAGAAAGCTGTAG+AGG 0.588403 2:+62701212 MsG0280010002.01.T01:CDS
CGACGTTCTCAAATGTTGCA+TGG 0.590652 2:-62700972 None:intergenic
TAGCCGTATCAACTGAAGAT+GGG 0.593299 2:+62701082 MsG0280010002.01.T01:CDS
GTTAGCAAGAAAGCTGTAGA+GGG 0.598414 2:+62701213 MsG0280010002.01.T01:CDS
AAGATTGGATTTGCCAACGC+CGG 0.601803 2:-62697789 None:intergenic
CATTTGAGAACGTCGACAGA+TGG 0.604678 2:+62700980 MsG0280010002.01.T01:CDS
GTTAGTAGCCTCCAGAGCTG+AGG 0.627901 2:-62701145 None:intergenic
TTGATACGGCTACAAGGTGA+CGG 0.654516 2:-62701071 None:intergenic
TACAAGTGCTTACTATCGTG+GGG 0.673719 2:+62700915 MsG0280010002.01.T01:CDS
AGTAGCGAATTCAACACCAA+TGG 0.690637 2:-62697858 None:intergenic
CAACAATGTTGGAATCTGTG+TGG 0.736098 2:-62701020 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAATTTATATTACAAAAT+TGG + Chr2:62699391-62699410 MsG0280010002.01.T01:intron 10.0%
!! TTAATTAATAATTCTATTAG+CGG + Chr2:62698291-62698310 MsG0280010002.01.T01:intron 10.0%
!!! AATTTTTATTTTTTTTGCTA+AGG - Chr2:62698614-62698633 None:intergenic 10.0%
!! AATATAAATTCTTAAGAGTT+GGG - Chr2:62699384-62699403 None:intergenic 15.0%
!! CTATTCAAATATTTGAAAAT+AGG - Chr2:62699438-62699457 None:intergenic 15.0%
!! TAAATAAAAACAATGTTACT+CGG - Chr2:62700523-62700542 None:intergenic 15.0%
!! TAATATAAATTCTTAAGAGT+TGG - Chr2:62699385-62699404 None:intergenic 15.0%
!!! TCTAAAATATGATTTGATTT+TGG + Chr2:62698638-62698657 MsG0280010002.01.T01:intron 15.0%
!!! TTGTTTTATATATTCTATGA+TGG + Chr2:62699010-62699029 MsG0280010002.01.T01:intron 15.0%
!! AAATAAAAACAATGTTACTC+GGG - Chr2:62700522-62700541 None:intergenic 20.0%
!! AAGGAATTACAAAAAACTAA+AGG + Chr2:62698690-62698709 MsG0280010002.01.T01:intron 20.0%
!! AATTTATACTAAATAGCGTA+TGG + Chr2:62699266-62699285 MsG0280010002.01.T01:intron 20.0%
!! AGGAATTACAAAAAACTAAA+GGG + Chr2:62698691-62698710 MsG0280010002.01.T01:intron 20.0%
!! ATTAAAAAACCAGAATTATG+GGG + Chr2:62700296-62700315 MsG0280010002.01.T01:intron 20.0%
!! GATTAAAAAACCAGAATTAT+GGG + Chr2:62700295-62700314 MsG0280010002.01.T01:intron 20.0%
!! TCTATAAAAATTTCAAAAGC+TGG - Chr2:62698732-62698751 None:intergenic 20.0%
!! TGATTAAAAAACCAGAATTA+TGG + Chr2:62700294-62700313 MsG0280010002.01.T01:intron 20.0%
!! TTGTTAGTATTAGAACTTTA+AGG + Chr2:62700468-62700487 MsG0280010002.01.T01:intron 20.0%
!! TTTGTTTAAAAAAGATCAAG+AGG + Chr2:62698447-62698466 MsG0280010002.01.T01:intron 20.0%
!!! AAAGTTCTAATACTAACAAT+TGG - Chr2:62700467-62700486 None:intergenic 20.0%
!!! AAGTTCTAATACTAACAATT+GGG - Chr2:62700466-62700485 None:intergenic 20.0%
!!! AGAAATGTTTTTATTTTCAC+TGG - Chr2:62699553-62699572 None:intergenic 20.0%
!!! AGAGTTCTAATACTAATAAT+AGG - Chr2:62700406-62700425 None:intergenic 20.0%
!!! AGTTCTAATACTAATAATAG+GGG - Chr2:62700404-62700423 None:intergenic 20.0%
!!! ATATCTTATTTAAGAACTGT+TGG + Chr2:62699033-62699052 MsG0280010002.01.T01:intron 20.0%
!!! ATGAAGAAGAAATGAATTTT+AGG + Chr2:62698265-62698284 MsG0280010002.01.T01:intron 20.0%
!!! GAGTTCTAATACTAATAATA+GGG - Chr2:62700405-62700424 None:intergenic 20.0%
!!! GTAACATTGTTTTTATTTAG+CGG + Chr2:62700524-62700543 MsG0280010002.01.T01:intron 20.0%
!!! TATCTTATTTAAGAACTGTT+GGG + Chr2:62699034-62699053 MsG0280010002.01.T01:intron 20.0%
!!! TCAGAGATCTTTAATTTAAA+TGG + Chr2:62698187-62698206 MsG0280010002.01.T01:intron 20.0%
!!! TGTTGATTCTAAAGTTATTA+AGG + Chr2:62697892-62697911 MsG0280010002.01.T01:CDS 20.0%
!!! TTTTGAAAGAAAAAAGTTGA+TGG - Chr2:62699982-62700001 None:intergenic 20.0%
!!! TTTTTGCTAAGGAAAATTTA+GGG - Chr2:62698603-62698622 None:intergenic 20.0%
!!! TTTTTTGCTAAGGAAAATTT+AGG - Chr2:62698604-62698623 None:intergenic 20.0%
! AATATGTAATGAAAGGAACA+TGG - Chr2:62699874-62699893 None:intergenic 25.0%
! ACACTAGTGTAGTAATATAT+TGG + Chr2:62699940-62699959 MsG0280010002.01.T01:intron 25.0%
! ATCTGTAATCAAACTTACAA+AGG + Chr2:62700653-62700672 MsG0280010002.01.T01:intron 25.0%
! ATGGTTAATGATATTGATGT+GGG + Chr2:62699796-62699815 MsG0280010002.01.T01:intron 25.0%
! ATTTAAATGGTTAAGTGATG+TGG + Chr2:62698200-62698219 MsG0280010002.01.T01:intron 25.0%
! CTAAAGTCAGTTACAAAATT+TGG - Chr2:62700841-62700860 None:intergenic 25.0%
! GAAATAAAGTGATTCTTTCT+CGG - Chr2:62701118-62701137 None:intergenic 25.0%
! GAAGATAATGTAAACTTTGT+TGG - Chr2:62700181-62700200 None:intergenic 25.0%
! TAATAATAACTAAAGCCTAC+AGG - Chr2:62698820-62698839 None:intergenic 25.0%
! TAATCAAACTTACAAAGGAT+AGG + Chr2:62700658-62700677 MsG0280010002.01.T01:intron 25.0%
! TATAAATTGTTGTCAAACAG+TGG - Chr2:62699254-62699273 None:intergenic 25.0%
! TATTGTTCAATTACTCTTCA+AGG - Chr2:62700222-62700241 None:intergenic 25.0%
! TTACAAATCAATCGTAACAA+TGG - Chr2:62700811-62700830 None:intergenic 25.0%
! TTATCAAGCTTACAAATGAT+AGG + Chr2:62700564-62700583 MsG0280010002.01.T01:intron 25.0%
! TTATCAGTAGTAAAAGTCTA+AGG + Chr2:62700350-62700369 MsG0280010002.01.T01:intron 25.0%
!! AGACTTTTACTACTGATAAT+TGG - Chr2:62700349-62700368 None:intergenic 25.0%
!! AGTTCTAATACTAACAATTG+GGG - Chr2:62700465-62700484 None:intergenic 25.0%
!! CATTTCTACATTTTGCTTAA+TGG + Chr2:62697979-62697998 MsG0280010002.01.T01:intron 25.0%
!! GAAAGAATCACTTTATTTCA+TGG + Chr2:62701119-62701138 MsG0280010002.01.T01:CDS 25.0%
!! TAAGGAAAATTTAGGGTAAA+GGG - Chr2:62698596-62698615 None:intergenic 25.0%
!! TAGCTGCTATTTAACAATAT+TGG + Chr2:62699345-62699364 MsG0280010002.01.T01:intron 25.0%
!! TGGCAAATACCAATTATTTT+AGG + Chr2:62698658-62698677 MsG0280010002.01.T01:intron 25.0%
!! TTCTCACATTTTCTTATAGA+AGG + Chr2:62699478-62699497 MsG0280010002.01.T01:intron 25.0%
!!! CTATACTTCAATTTTTTGAC+TGG + Chr2:62698847-62698866 MsG0280010002.01.T01:intron 25.0%
!!! GGCAAATACCAATTATTTTA+GGG + Chr2:62698659-62698678 MsG0280010002.01.T01:intron 25.0%
!!! TAACTTGTATTTTTGAGCAA+AGG + Chr2:62700270-62700289 MsG0280010002.01.T01:intron 25.0%
AAACTTACAAAGGATAGGTA+TGG + Chr2:62700663-62700682 MsG0280010002.01.T01:intron 30.0%
AACCAATGCCCTAAAATAAT+TGG - Chr2:62698670-62698689 None:intergenic 30.0%
AAGCTTACAAATGATAGGTA+TGG + Chr2:62700569-62700588 MsG0280010002.01.T01:intron 30.0%
AGTAGTTAATTCTTACTAGC+AGG - Chr2:62700100-62700119 None:intergenic 30.0%
ATCACACTCTTTCGATATTT+AGG + Chr2:62699618-62699637 MsG0280010002.01.T01:intron 30.0%
GATGGTTAATGATATTGATG+TGG + Chr2:62699795-62699814 MsG0280010002.01.T01:intron 30.0%
GGAACATGGAAAATTATAAC+TGG - Chr2:62699860-62699879 None:intergenic 30.0%
GTAGTTAATTCTTACTAGCA+GGG - Chr2:62700099-62700118 None:intergenic 30.0%
TCACACTCTTTCGATATTTA+GGG + Chr2:62699619-62699638 MsG0280010002.01.T01:intron 30.0%
TGATATTGATGTGGGTTTAT+AGG + Chr2:62699804-62699823 MsG0280010002.01.T01:intron 30.0%
TGGGATGAATATGTAATGAA+AGG - Chr2:62699881-62699900 None:intergenic 30.0%
! AAGATCTATTTTCTCTCCTT+TGG - Chr2:62701268-62701287 None:intergenic 30.0%
! ATGGGGATATTTGTTTCTTT+CGG - Chr2:62700067-62700086 None:intergenic 30.0%
! CAAAAGAGTAGTTTTCCATT+TGG - Chr2:62699770-62699789 None:intergenic 30.0%
! CATTTTCTTATAGAAGGCTA+TGG + Chr2:62699484-62699503 MsG0280010002.01.T01:intron 30.0%
! CTAAGGAAAATTTAGGGTAA+AGG - Chr2:62698597-62698616 None:intergenic 30.0%
! TATGTTTAGAGTCCCATATT+TGG + Chr2:62699078-62699097 MsG0280010002.01.T01:intron 30.0%
! TTCAAGATTGAACTCGTTTT+TGG - Chr2:62697828-62697847 None:intergenic 30.0%
! TTTCTAATTCTTGTTTGACC+TGG + Chr2:62698784-62698803 MsG0280010002.01.T01:intron 30.0%
!! AGTTTTCCATTTGGAATAGA+GGG - Chr2:62699761-62699780 None:intergenic 30.0%
!! TAGTTTTCCATTTGGAATAG+AGG - Chr2:62699762-62699781 None:intergenic 30.0%
!!! CTTACAAGCTAGTTTTGTAA+GGG + Chr2:62699147-62699166 MsG0280010002.01.T01:intron 30.0%
!!! TACCAATTATTTTAGGGCAT+TGG + Chr2:62698665-62698684 MsG0280010002.01.T01:intron 30.0%
!!! TTATTTTAGGGCATTGGTTA+AGG + Chr2:62698671-62698690 MsG0280010002.01.T01:intron 30.0%
AAAAAACCAGAATTATGGGG+TGG + Chr2:62700299-62700318 MsG0280010002.01.T01:intron 35.0%
AAAAACCAGAATTATGGGGT+GGG + Chr2:62700300-62700319 MsG0280010002.01.T01:intron 35.0%
AACAAGCATCACAACAATGT+TGG - Chr2:62701034-62701053 None:intergenic 35.0%
AACATTGTTGTGATGCTTGT+TGG + Chr2:62701033-62701052 MsG0280010002.01.T01:CDS 35.0%
AACCAAGCAAGTTCAAAATG+AGG - Chr2:62698975-62698994 None:intergenic 35.0%
AAGGCCTAAAGTACAATAAG+TGG + Chr2:62700621-62700640 MsG0280010002.01.T01:intron 35.0%
AAGTTATTAAGGCTCAGATC+TGG + Chr2:62697903-62697922 MsG0280010002.01.T01:CDS 35.0%
ACATCAGCACTACAAACAAA+TGG - Chr2:62698146-62698165 None:intergenic 35.0%
ACCTTCTCTCAACCAAATAT+GGG - Chr2:62699093-62699112 None:intergenic 35.0%
ACGATAGTAAGCACTTGTAA+TGG - Chr2:62700914-62700933 None:intergenic 35.0%
ACTTATTGTACTTTAGGCCT+TGG - Chr2:62700622-62700641 None:intergenic 35.0%
AGTTATTAAGGCTCAGATCT+GGG + Chr2:62697904-62697923 MsG0280010002.01.T01:CDS 35.0%
ATTACAAGTGCTTACTATCG+TGG + Chr2:62700913-62700932 MsG0280010002.01.T01:CDS 35.0%
ATTGGGTGCAGTGTTTAAAT+GGG - Chr2:62699900-62699919 None:intergenic 35.0%
CAGCTTTCTTGCTAACAATA+CGG - Chr2:62701209-62701228 None:intergenic 35.0%
GAAGAAACAGAGCGAAAATA+AGG + Chr2:62699510-62699529 MsG0280010002.01.T01:intron 35.0%
GACACCACTTATTGTACTTT+AGG - Chr2:62700628-62700647 None:intergenic 35.0%
GTCTAATCTTCAGTTGAACT+TGG + Chr2:62698877-62698896 MsG0280010002.01.T01:intron 35.0%
TAGTAGCAGTTGAATTTGGA+CGG + Chr2:62698371-62698390 MsG0280010002.01.T01:intron 35.0%
TCCAAATTCAACTGCTACTA+TGG - Chr2:62698371-62698390 None:intergenic 35.0%
TCCATAGTAGCAGTTGAATT+TGG + Chr2:62698367-62698386 MsG0280010002.01.T01:intron 35.0%
TCGATCTATGGTAAAAAGAC+AGG + Chr2:62698523-62698542 MsG0280010002.01.T01:intron 35.0%
TGGATATGAGCTCATTAGTT+GGG + Chr2:62699114-62699133 MsG0280010002.01.T01:intron 35.0%
TTACAAGTGCTTACTATCGT+GGG + Chr2:62700914-62700933 MsG0280010002.01.T01:CDS 35.0%
TTTACCATAGATCGAGTCTT+TGG - Chr2:62698518-62698537 None:intergenic 35.0%
! AACCAAGAGCATGTTTGATT+TGG - Chr2:62699576-62699595 None:intergenic 35.0%
! AACTACTCTTTTGCATGTGA+TGG + Chr2:62699777-62699796 MsG0280010002.01.T01:intron 35.0%
! ATATTTGTTTCTTTCGGGGA+GGG - Chr2:62700061-62700080 None:intergenic 35.0%
! CCTTACAAAACTAGCTTGTA+AGG - Chr2:62699149-62699168 None:intergenic 35.0%
! GAAAATTTAGGGTAAAGGGA+TGG - Chr2:62698592-62698611 None:intergenic 35.0%
! GAATTCAGTGTTGTGTCTTT+TGG + Chr2:62698318-62698337 MsG0280010002.01.T01:intron 35.0%
! TGGGGATATTTGTTTCTTTC+GGG - Chr2:62700066-62700085 None:intergenic 35.0%
!! CTATTCAAGGTAGTTCTGAT+CGG + Chr2:62697761-62697780 MsG0280010002.01.T01:CDS 35.0%
!! GTTTTCCATTTGGAATAGAG+GGG - Chr2:62699760-62699779 None:intergenic 35.0%
!!! CCTTACAAGCTAGTTTTGTA+AGG + Chr2:62699146-62699165 MsG0280010002.01.T01:intron 35.0%
AAGGAACATGTCGATAACAG+GGG - Chr2:62700203-62700222 None:intergenic 40.0%
ACTCTTCTACCATCTTGCAT+TGG - Chr2:62699918-62699937 None:intergenic 40.0%
AGGCAGAGAAGACAATCTAT+CGG - Chr2:62698557-62698576 None:intergenic 40.0%
AGTAGCGAATTCAACACCAA+TGG - Chr2:62697861-62697880 None:intergenic 40.0%
ATAGATTGTCTTCTCTGCCT+TGG + Chr2:62698557-62698576 MsG0280010002.01.T01:intron 40.0%
ATCTCCAAAGACTCGATCTA+TGG + Chr2:62698511-62698530 MsG0280010002.01.T01:intron 40.0%
ATGAGGCTTATGCACGAAAT+AGG - Chr2:62698958-62698977 None:intergenic 40.0%
CAAATTTCGCTACTCTACAG+AGG + Chr2:62699309-62699328 MsG0280010002.01.T01:intron 40.0%
CAACAATGTTGGAATCTGTG+TGG - Chr2:62701023-62701042 None:intergenic 40.0%
CAAGGAACATGTCGATAACA+GGG - Chr2:62700204-62700223 None:intergenic 40.0%
CATTGGGTGCAGTGTTTAAA+TGG - Chr2:62699901-62699920 None:intergenic 40.0%
CGACTATGACTACCTATTCA+AGG + Chr2:62697748-62697767 MsG0280010002.01.T01:CDS 40.0%
CGATCAGAACTACCTTGAAT+AGG - Chr2:62697763-62697782 None:intergenic 40.0%
CTCCAAATCAAACATGCTCT+TGG + Chr2:62699571-62699590 MsG0280010002.01.T01:intron 40.0%
CTCTGTAGAGTAGCGAAATT+TGG - Chr2:62699311-62699330 None:intergenic 40.0%
CTCTTCTACCATCTTGCATT+GGG - Chr2:62699917-62699936 None:intergenic 40.0%
CTGGATATGAGCTCATTAGT+TGG + Chr2:62699113-62699132 MsG0280010002.01.T01:intron 40.0%
CTTGAATCCAAATCCACCAT+TGG + Chr2:62697842-62697861 MsG0280010002.01.T01:CDS 40.0%
GACCTTCTCTCAACCAAATA+TGG - Chr2:62699094-62699113 None:intergenic 40.0%
GTTAGCAAGAAAGCTGTAGA+GGG + Chr2:62701213-62701232 MsG0280010002.01.T01:CDS 40.0%
TAACAACAGATCACGATCGA+CGG - Chr2:62698013-62698032 None:intergenic 40.0%
TACAAGTGCTTACTATCGTG+GGG + Chr2:62700915-62700934 MsG0280010002.01.T01:CDS 40.0%
TAGACCTCTCCAATATCAAG+CGG - Chr2:62699060-62699079 None:intergenic 40.0%
TAGCCGTATCAACTGAAGAT+GGG + Chr2:62701082-62701101 MsG0280010002.01.T01:CDS 40.0%
TATTTGGTTGAGAGAAGGTC+TGG + Chr2:62699094-62699113 MsG0280010002.01.T01:intron 40.0%
TCAAGGAACATGTCGATAAC+AGG - Chr2:62700205-62700224 None:intergenic 40.0%
TCCCATATTTGGTTGAGAGA+AGG + Chr2:62699089-62699108 MsG0280010002.01.T01:intron 40.0%
TGAGTAAAGTTGCCTATGGT+AGG + Chr2:62699701-62699720 MsG0280010002.01.T01:intron 40.0%
TGTTAGCAAGAAAGCTGTAG+AGG + Chr2:62701212-62701231 MsG0280010002.01.T01:CDS 40.0%
! CTTCCCATCTTCAGTTGATA+CGG - Chr2:62701088-62701107 None:intergenic 40.0%
! GATATTTGTTTCTTTCGGGG+AGG - Chr2:62700062-62700081 None:intergenic 40.0%
! GATGCTGCATAGTTGCTTTA+TGG + Chr2:62700784-62700803 MsG0280010002.01.T01:intron 40.0%
! GGGGATATTTGTTTCTTTCG+GGG - Chr2:62700065-62700084 None:intergenic 40.0%
! TCTATTTTCTCTCCTTTGGC+TGG - Chr2:62701264-62701283 None:intergenic 40.0%
! TGATTCAAGTTCTGTAGCCA+AGG + Chr2:62700602-62700621 MsG0280010002.01.T01:intron 40.0%
! TTCTTGTTTGACCTGGTTAG+CGG + Chr2:62698791-62698810 MsG0280010002.01.T01:intron 40.0%
!! AGCATTGTGTCGTTTGAGTA+GGG + Chr2:62699733-62699752 MsG0280010002.01.T01:intron 40.0%
!! AGCCTCATTTTGAACTTGCT+TGG + Chr2:62698970-62698989 MsG0280010002.01.T01:intron 40.0%
!! GTTTCAGCTTTGAAGAGAGT+TGG + Chr2:62701297-62701316 MsG0280010002.01.T01:CDS 40.0%
!! TTCAACACCAATGGTGGATT+TGG - Chr2:62697852-62697871 None:intergenic 40.0%
!! TTCACACTGTTTCTATCTGC+AGG + Chr2:62700881-62700900 MsG0280010002.01.T01:intron 40.0%
AAAGTTGCCTATGGTAGGCT+GGG + Chr2:62699706-62699725 MsG0280010002.01.T01:intron 45.0%
AACAACAGATCACGATCGAC+GGG - Chr2:62698012-62698031 None:intergenic 45.0%
AACAATTGGGGCACATCAAG+AGG - Chr2:62700453-62700472 None:intergenic 45.0%
AAGATTGGATTTGCCAACGC+CGG - Chr2:62697792-62697811 None:intergenic 45.0%
AGCGAATTCAACACCAATGG+TGG - Chr2:62697858-62697877 None:intergenic 45.0%
AGCGTGAGTAAAGTTGCCTA+TGG + Chr2:62699697-62699716 MsG0280010002.01.T01:intron 45.0%
ATGCAGCATCGTGTTCATTC+AGG - Chr2:62700774-62700793 None:intergenic 45.0%
CATTTGAGAACGTCGACAGA+TGG + Chr2:62700980-62700999 MsG0280010002.01.T01:CDS 45.0%
CGACGTTCTCAAATGTTGCA+TGG - Chr2:62700975-62700994 None:intergenic 45.0%
GGTGAAACGAGAGAGAAGAT+TGG - Chr2:62697807-62697826 None:intergenic 45.0%
GTAGCCGTATCAACTGAAGA+TGG + Chr2:62701081-62701100 MsG0280010002.01.T01:CDS 45.0%
GTGTGACATCTATCAGACAC+CGG - Chr2:62698088-62698107 None:intergenic 45.0%
TAAAGTTGCCTATGGTAGGC+TGG + Chr2:62699705-62699724 MsG0280010002.01.T01:intron 45.0%
TTGATACGGCTACAAGGTGA+CGG - Chr2:62701074-62701093 None:intergenic 45.0%
TTTCATGGAAACCTCAGCTC+TGG + Chr2:62701134-62701153 MsG0280010002.01.T01:CDS 45.0%
! CTTCAGTTGATACGGCTACA+AGG - Chr2:62701080-62701099 None:intergenic 45.0%
! TGGCACATCAGATTTTGCAC+AGG - Chr2:62700329-62700348 None:intergenic 45.0%
!! GAGCATTGTGTCGTTTGAGT+AGG + Chr2:62699732-62699751 MsG0280010002.01.T01:intron 45.0%
AAGTTGCCTATGGTAGGCTG+GGG + Chr2:62699707-62699726 MsG0280010002.01.T01:intron 50.0%
ACACTGCACCCAATGCAAGA+TGG + Chr2:62699906-62699925 MsG0280010002.01.T01:intron 50.0%
ACTGTTGGGCCGCTTGATAT+TGG + Chr2:62699048-62699067 MsG0280010002.01.T01:intron 50.0%
AGGGTCCCCTCTATTCCAAA+TGG + Chr2:62699752-62699771 MsG0280010002.01.T01:intron 50.0%
CAGCATCGTGTTCATTCAGG+TGG - Chr2:62700771-62700790 None:intergenic 50.0%
GGGATACTGCTGGTCAAGAA+AGG + Chr2:62697924-62697943 MsG0280010002.01.T01:CDS 50.0%
GGTATCCCACCCCATAATTC+TGG - Chr2:62700308-62700327 None:intergenic 50.0%
TGTCTTCTCTGCCTTGGACT+GGG + Chr2:62698563-62698582 MsG0280010002.01.T01:intron 50.0%
TTGTCTTCTCTGCCTTGGAC+TGG + Chr2:62698562-62698581 MsG0280010002.01.T01:intron 50.0%
!! GCTGTAGAGGGTGCTGAAAA+TGG + Chr2:62701225-62701244 MsG0280010002.01.T01:CDS 50.0%
GCTTACTATCGTGGGGCAGT+TGG + Chr2:62700922-62700941 MsG0280010002.01.T01:CDS 55.0%
GTCTTCTCTGCCTTGGACTG+GGG + Chr2:62698564-62698583 MsG0280010002.01.T01:intron 55.0%
GTTAGTAGCCTCCAGAGCTG+AGG - Chr2:62701148-62701167 None:intergenic 55.0%
TGGGCCGCTTGATATTGGAG+AGG + Chr2:62699053-62699072 MsG0280010002.01.T01:intron 55.0%
! CATGGAAACCTCAGCTCTGG+AGG + Chr2:62701137-62701156 MsG0280010002.01.T01:CDS 55.0%
! CTTCCGTCGGTCAGAAGTGT+CGG - Chr2:62698059-62698078 None:intergenic 55.0%
! GCTCAGATCTGGGATACTGC+TGG + Chr2:62697914-62697933 MsG0280010002.01.T01:CDS 55.0%
!! ACTAGCAGGGTGCTGCTAGA+TGG - Chr2:62700086-62700105 None:intergenic 55.0%
!! CTAGCAGGGTGCTGCTAGAT+GGG - Chr2:62700085-62700104 None:intergenic 55.0%
!! GTAGTTCTGATCGGCGACTC+CGG + Chr2:62697770-62697789 MsG0280010002.01.T01:CDS 55.0%
!! TAGCAGGGTGCTGCTAGATG+GGG - Chr2:62700084-62700103 None:intergenic 55.0%
AACGCGTCTGTGCCAGCCAA+AGG + Chr2:62701249-62701268 MsG0280010002.01.T01:CDS 60.0%
CCTACAGGCTACCGCTAACC+AGG - Chr2:62698805-62698824 None:intergenic 60.0%
CCTGGTTAGCGGTAGCCTGT+AGG + Chr2:62698802-62698821 MsG0280010002.01.T01:intron 60.0%
TTGCCTATGGTAGGCTGGGG+TGG + Chr2:62699710-62699729 MsG0280010002.01.T01:intron 60.0%
! GCACCGACACTTCTGACCGA+CGG + Chr2:62698053-62698072 MsG0280010002.01.T01:intron 60.0%
ACACCGGACGCGTCTTCCGT+CGG - Chr2:62698072-62698091 None:intergenic 65.0%
AGGGATGGTGCCCCAGTCCA+AGG - Chr2:62698577-62698596 None:intergenic 65.0%
GCTCCACCCCAGCCTACCAT+AGG - Chr2:62699716-62699735 None:intergenic 65.0%
TGACCGACGGAAGACGCGTC+CGG + Chr2:62698066-62698085 MsG0280010002.01.T01:intron 65.0%
CTGATCGGCGACTCCGGCGT+TGG + Chr2:62697776-62697795 MsG0280010002.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 62697725 62701335 62697725 ID=MsG0280010002.01;Name=MsG0280010002.01
Chr2 mRNA 62697725 62701335 62697725 ID=MsG0280010002.01.T01;Parent=MsG0280010002.01;Name=MsG0280010002.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|2|0|217
Chr2 exon 62697725 62697945 62697725 ID=MsG0280010002.01.T01:exon:9855;Parent=MsG0280010002.01.T01
Chr2 exon 62700903 62701335 62700903 ID=MsG0280010002.01.T01:exon:9856;Parent=MsG0280010002.01.T01
Chr2 CDS 62697725 62697945 62697725 ID=MsG0280010002.01.T01:cds;Parent=MsG0280010002.01.T01
Chr2 CDS 62700903 62701335 62700903 ID=MsG0280010002.01.T01:cds;Parent=MsG0280010002.01.T01
Gene Sequence

>MsG0280010002.01.T01

ATGGCGGGTTACAGAGCAGACGACGACTATGACTACCTATTCAAGGTAGTTCTGATCGGCGACTCCGGCGTTGGCAAATCCAATCTTCTCTCTCGTTTCACCAAAAACGAGTTCAATCTTGAATCCAAATCCACCATTGGTGTTGAATTCGCTACTCGTACTTTAAATGTTGATTCTAAAGTTATTAAGGCTCAGATCTGGGATACTGCTGGTCAAGAAAGGTATCGCGCCATTACAAGTGCTTACTATCGTGGGGCAGTTGGTGCACTTCTTGTATATGATGTTACACGCCATGCAACATTTGAGAACGTCGACAGATGGCTGAAAGAACTGCGAAACCACACAGATTCCAACATTGTTGTGATGCTTGTTGGCAACAAAGCAGATCTCCGTCACCTTGTAGCCGTATCAACTGAAGATGGGAAGTCTTATGCCGAGAAAGAATCACTTTATTTCATGGAAACCTCAGCTCTGGAGGCTACTAACGTAGAGAATTCATTTGCTGAAGTTCTGACTCAAATCTACCGTATTGTTAGCAAGAAAGCTGTAGAGGGTGCTGAAAATGGAAACGCGTCTGTGCCAGCCAAAGGAGAGAAAATAGATCTTAAGAATGATGTTTCAGCTTTGAAGAGAGTTGGTTGCTGCTCAAGCTAA

Protein sequence

>MsG0280010002.01.T01

MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGNKADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENSFAEVLTQIYRIVSKKAVEGAENGNASVPAKGEKIDLKNDVSALKRVGCCSS*