AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015793.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015793.01.T01 MTR_3g077500 97.538 325 6 1 36 358 52 376 0.0 637
MsG0380015793.01.T01 MTR_3g111540 29.653 317 206 6 40 352 44 347 6.36e-46 160
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015793.01.T01 AT5G63040 62.637 273 90 2 84 347 87 356 9.20e-106 315
MsG0380015793.01.T01 AT5G63040 62.637 273 90 2 84 347 87 356 1.86e-105 314
MsG0380015793.01.T01 AT1G48460 34.008 247 160 2 108 352 88 333 1.68e-42 151
MsG0380015793.01.T01 AT1G48460 36.269 193 120 2 160 352 107 296 2.45e-32 123

Find 52 sgRNAs with CRISPR-Local

Find 372 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGATCAAACCCCTTGTTTA+TGG 0.178897 3:+75085441 MsG0380015793.01.T01:exon
GAATCCAACCAACAATAAAT+AGG 0.199228 3:-75085488 None:intergenic
ACAAACTTCGCAAGAAATTC+TGG 0.227272 3:-75085131 None:intergenic
GAATTTGTAACTGAGGATTT+TGG 0.227815 3:+75085310 MsG0380015793.01.T01:exon
AGTATTTGTAGTTCTACTTC+TGG 0.244490 3:+75085355 MsG0380015793.01.T01:exon
TAAGTATATGCTCAGAATTA+AGG 0.245928 3:+75085419 MsG0380015793.01.T01:exon
GTAAACTCTTCAACTCTAAT+TGG 0.248570 3:+75085239 MsG0380015793.01.T01:exon
CATGGCTATAAACAGTTCTT+TGG 0.257353 3:+75085001 MsG0380015793.01.T01:exon
GCTTTATCATTCACAGTTAG+AGG 0.284069 3:+75084957 MsG0380015793.01.T01:exon
CTGACTCGTTTAGATTATAA+AGG 0.309780 3:+75085277 MsG0380015793.01.T01:exon
GGAATTGTAGGACATTTAGA+AGG 0.334567 3:-75085028 None:intergenic
CATTTGACCCTATTTATTGT+TGG 0.350121 3:+75085480 MsG0380015793.01.T01:exon
GGATCAAACCCCTTGTTTAT+GGG 0.385102 3:+75085442 MsG0380015793.01.T01:exon
TTTGTTATTTACAGGTGTAT+AGG 0.386758 3:+75084898 MsG0380015793.01.T01:intron
ACTAAATAGAGCAGCACAAT+TGG 0.398311 3:+75084929 MsG0380015793.01.T01:exon
TCCTTGGTGTGATTTGCATC+TGG 0.400119 3:+75085048 MsG0380015793.01.T01:exon
AATCCAACCAACAATAAATA+GGG 0.408760 3:-75085487 None:intergenic
ATCTCATGAGGAAGCTTGAC+AGG 0.413139 3:-75085073 None:intergenic
AAGTATATGCTCAGAATTAA+GGG 0.416150 3:+75085420 MsG0380015793.01.T01:exon
ATGGCTATAAACAGTTCTTT+GGG 0.442335 3:+75085002 MsG0380015793.01.T01:exon
ATAAATAGGGTCAAATGGTA+AGG 0.454109 3:-75085474 None:intergenic
CAGAATCTGTACATGTACTT+TGG 0.455395 3:+75085204 MsG0380015793.01.T01:exon
CAACAATAAATAGGGTCAAA+TGG 0.461008 3:-75085479 None:intergenic
TGACCCTATTTATTGTTGGT+TGG 0.461856 3:+75085484 MsG0380015793.01.T01:exon
CTAAATGTCCTACAATTCCT+TGG 0.466535 3:+75085032 MsG0380015793.01.T01:exon
ATTGTGCTGCTCTATTTAGT+TGG 0.471450 3:-75084926 None:intergenic
AAATCACACCAAGGAATTGT+AGG 0.479343 3:-75085040 None:intergenic
TTGGATACTGAAGAAGCAAA+TGG 0.489988 3:+75085329 MsG0380015793.01.T01:exon
TCAAGTGAATCTAACATCAA+AGG 0.496031 3:-75085569 None:intergenic
GGGTCAAATGGTAAGGGACT+TGG 0.502356 3:-75085467 None:intergenic
TTCTGCCCAAAGATGAAGTA+GGG 0.505774 3:-75085186 None:intergenic
GATCAAACCCCTTGTTTATG+GGG 0.518152 3:+75085443 MsG0380015793.01.T01:exon
TCTAACATCAAAGGCTCACA+AGG 0.523151 3:-75085560 None:intergenic
TGGACTTCACTGCATCGTTG+TGG 0.554588 3:-75085111 None:intergenic
ATTCTGCCCAAAGATGAAGT+AGG 0.556079 3:-75085187 None:intergenic
GGTTGGATTCAAATTATACT+CGG 0.596618 3:+75085501 MsG0380015793.01.T01:exon
TAAATAGGGTCAAATGGTAA+GGG 0.597135 3:-75085473 None:intergenic
GTTTATAGCCATGTTGTGAG+AGG 0.597235 3:-75084991 None:intergenic
TGCATCGTTGTGGAAGCAGA+AGG 0.612704 3:-75085101 None:intergenic
GAATTGTAGGACATTTAGAA+GGG 0.613450 3:-75085027 None:intergenic
GGACTTGGACCCCATAAACA+AGG 0.615884 3:-75085452 None:intergenic
AGTATATGCTCAGAATTAAG+GGG 0.626479 3:+75085421 MsG0380015793.01.T01:exon
TCTCATGAGGAAGCTTGACA+GGG 0.637541 3:-75085072 None:intergenic
CAGAAGGTATAAATCTCATG+AGG 0.642726 3:-75085085 None:intergenic
TGAGTTGACCTCTCACAACA+TGG 0.656496 3:+75084983 MsG0380015793.01.T01:exon
GACTTGGACCCCATAAACAA+GGG 0.657424 3:-75085451 None:intergenic
ACTTGGACCCCATAAACAAG+GGG 0.664836 3:-75085450 None:intergenic
GATACTGAAGAAGCAAATGG+AGG 0.673897 3:+75085332 MsG0380015793.01.T01:exon
TCTGCCCAAAGATGAAGTAG+GGG 0.685377 3:-75085185 None:intergenic
CTGCCCAAAGATGAAGTAGG+GGG 0.696371 3:-75085184 None:intergenic
ACCAGATGCAAATCACACCA+AGG 0.715295 3:-75085049 None:intergenic
CTAACATCAAAGGCTCACAA+GGG 0.729269 3:-75085559 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGTTATAACAAAAAAAAAA+TGG - Chr3:75083679-75083698 None:intergenic 10.0%
!! AACATTTACAAAAATTGAAA+TGG + Chr3:75084070-75084089 MsG0380015793.01.T01:intron 15.0%
!! ACATTTACAAAAATTGAAAT+GGG + Chr3:75084071-75084090 MsG0380015793.01.T01:intron 15.0%
!!! AATATACTATCTCATTTTTT+AGG - Chr3:75080680-75080699 None:intergenic 15.0%
!!! AGTATTTTAGTTAAAAATCA+TGG + Chr3:75080751-75080770 MsG0380015793.01.T01:intron 15.0%
!!! CAAATTATTTTGTTATTTAC+AGG + Chr3:75084890-75084909 MsG0380015793.01.T01:intron 15.0%
!!! TTTTTTTTGTATTAGTATCA+TGG + Chr3:75080042-75080061 MsG0380015793.01.T01:intron 15.0%
!! AAGACTATTTGGTTAATATT+GGG - Chr3:75082208-75082227 None:intergenic 20.0%
!! AGCAAATGATTATACATTTA+TGG - Chr3:75079851-75079870 None:intergenic 20.0%
!! TAAAATAGTTGGAAGTTATA+TGG - Chr3:75081022-75081041 None:intergenic 20.0%
!! TCAAACTAATCTCTATATAT+AGG - Chr3:75080897-75080916 None:intergenic 20.0%
!! TTATAAAATGATATGAAACC+TGG - Chr3:75080281-75080300 None:intergenic 20.0%
!! TTGAACATTGATATTTAAGT+TGG - Chr3:75084047-75084066 None:intergenic 20.0%
!! TTGTATACTATAAAGACTAA+GGG + Chr3:75081116-75081135 MsG0380015793.01.T01:intron 20.0%
!! TTTGTATACTATAAAGACTA+AGG + Chr3:75081115-75081134 MsG0380015793.01.T01:intron 20.0%
!!! AGATTATAAAGGATATTTTC+AGG + Chr3:75085288-75085307 MsG0380015793.01.T01:exon 20.0%
!!! GTAGAAGAATTTATTTTCTT+AGG + Chr3:75085523-75085542 MsG0380015793.01.T01:exon 20.0%
!!! TAGAAGTATTTGAAATGTTT+TGG - Chr3:75084843-75084862 None:intergenic 20.0%
!!! TTACACTGACTTATTTTTTT+AGG + Chr3:75080728-75080747 MsG0380015793.01.T01:intron 20.0%
!!! TTCTCTTTTAGTTTTTTATC+TGG - Chr3:75083190-75083209 None:intergenic 20.0%
! AAAAGAGAAGAAGATTATTC+TGG + Chr3:75083201-75083220 MsG0380015793.01.T01:intron 25.0%
! AAAGAGAAATTGAATGTGTT+TGG + Chr3:75083843-75083862 MsG0380015793.01.T01:intron 25.0%
! AAAGATATGAATGTGTACTA+TGG + Chr3:75080867-75080886 MsG0380015793.01.T01:intron 25.0%
! AAGAATAATATGAGGAAATC+TGG - Chr3:75084320-75084339 None:intergenic 25.0%
! AAGAGAAATTGAATGTGTTT+GGG + Chr3:75083844-75083863 MsG0380015793.01.T01:intron 25.0%
! AAGTATATGCTCAGAATTAA+GGG + Chr3:75085420-75085439 MsG0380015793.01.T01:exon 25.0%
! AAGTTATATGGAGTTAGTTA+AGG - Chr3:75081010-75081029 None:intergenic 25.0%
! AAGTTTATAGGCTTCAATAT+GGG - Chr3:75081194-75081213 None:intergenic 25.0%
! AATCCAACCAACAATAAATA+GGG - Chr3:75085490-75085509 None:intergenic 25.0%
! ACTTCAATCATTGAATCATT+GGG + Chr3:75083973-75083992 MsG0380015793.01.T01:intron 25.0%
! AGATAATTCGATTTCTTGAT+TGG - Chr3:75082856-75082875 None:intergenic 25.0%
! AGTAGTTAAGCATTAAAAGA+AGG - Chr3:75081332-75081351 None:intergenic 25.0%
! AGTTAAAAATCATGGAATCA+GGG + Chr3:75080759-75080778 MsG0380015793.01.T01:intron 25.0%
! ATAGCACAATTCAAATCTTA+AGG + Chr3:75079915-75079934 MsG0380015793.01.T01:CDS 25.0%
! ATATTCTAGCAAATGCATAT+AGG + Chr3:75080695-75080714 MsG0380015793.01.T01:intron 25.0%
! ATGAATTTAGACAACCAATT+AGG - Chr3:75084744-75084763 None:intergenic 25.0%
! ATGTATAATCATTTGCTTGA+TGG + Chr3:75079854-75079873 MsG0380015793.01.T01:CDS 25.0%
! ATGTTAAAAATCATGGAATC+AGG + Chr3:75083374-75083393 MsG0380015793.01.T01:intron 25.0%
! ATTGAAAATTTCAGTGTTTG+AGG - Chr3:75084196-75084215 None:intergenic 25.0%
! ATTGTATTCCAAACTCAAAT+TGG - Chr3:75081079-75081098 None:intergenic 25.0%
! CATGTTACTGTTAAAATAGT+TGG - Chr3:75083649-75083668 None:intergenic 25.0%
! GAAGACTATTTGGTTAATAT+TGG - Chr3:75082209-75082228 None:intergenic 25.0%
! GTATTGCAGAAAACAATAAA+GGG - Chr3:75083744-75083763 None:intergenic 25.0%
! GTTCTTACTTGAAAGATTAA+CGG - Chr3:75084653-75084672 None:intergenic 25.0%
! TAAGTATATGCTCAGAATTA+AGG + Chr3:75085419-75085438 MsG0380015793.01.T01:exon 25.0%
! TAGCACAATTCAAATCTTAA+GGG + Chr3:75079916-75079935 MsG0380015793.01.T01:CDS 25.0%
! TAGTTAAAAATCATGGAATC+AGG + Chr3:75080758-75080777 MsG0380015793.01.T01:intron 25.0%
! TGATACCATGTTAAAAATCA+TGG + Chr3:75083367-75083386 MsG0380015793.01.T01:intron 25.0%
! TGTTAAAAATCATGGAATCA+GGG + Chr3:75083375-75083394 MsG0380015793.01.T01:intron 25.0%
! TTCCTTACTTGATATTTGAT+GGG - Chr3:75082153-75082172 None:intergenic 25.0%
!! AAGATATTTGTTGAGTTTCA+TGG + Chr3:75084105-75084124 MsG0380015793.01.T01:intron 25.0%
!! ACATGTACTTTGGATATTTT+TGG + Chr3:75085214-75085233 MsG0380015793.01.T01:exon 25.0%
!! AGATATTTGTTGAGTTTCAT+GGG + Chr3:75084106-75084125 MsG0380015793.01.T01:intron 25.0%
!! ATGGTTACAACTAATTTTGT+TGG - Chr3:75082254-75082273 None:intergenic 25.0%
!! CACTCATTTACTCAATATTT+TGG - Chr3:75082346-75082365 None:intergenic 25.0%
!! CATGTACTTTGGATATTTTT+GGG + Chr3:75085215-75085234 MsG0380015793.01.T01:exon 25.0%
!! CTATTTGTTTCTTCACAAAA+TGG + Chr3:75083947-75083966 MsG0380015793.01.T01:intron 25.0%
!! CTTTATTGTTTTCTGCAATA+CGG + Chr3:75083743-75083762 MsG0380015793.01.T01:intron 25.0%
!! GAATACAATGAAAGTACAAT+TGG + Chr3:75081090-75081109 MsG0380015793.01.T01:intron 25.0%
!! GTAATATTATTGTTGTTCTC+TGG - Chr3:75080200-75080219 None:intergenic 25.0%
!! TGATTCCATGATTTTTAACA+TGG - Chr3:75083375-75083394 None:intergenic 25.0%
!! TTCTTTTATTGAATTCAGAG+AGG + Chr3:75080327-75080346 MsG0380015793.01.T01:CDS 25.0%
!! TTTATCCAGTTTTACCTAAT+TGG + Chr3:75084727-75084746 MsG0380015793.01.T01:intron 25.0%
!!! AATTTGTTAAATACGCACTA+AGG - Chr3:75080628-75080647 None:intergenic 25.0%
!!! AGCATTGATATATTTGTTGA+TGG - Chr3:75081552-75081571 None:intergenic 25.0%
!!! ATTGCTTTCAATCATTTTTG+AGG + Chr3:75080430-75080449 MsG0380015793.01.T01:CDS 25.0%
!!! TCATTTGCATCGTTTTTTTT+TGG - Chr3:75083118-75083137 None:intergenic 25.0%
!!! TTTGTTATTTACAGGTGTAT+AGG + Chr3:75084898-75084917 MsG0380015793.01.T01:intron 25.0%
AAATATGTGGATGAGATATG+AGG + Chr3:75082419-75082438 MsG0380015793.01.T01:intron 30.0%
AAATCGAATCCAGAAATTGA+AGG + Chr3:75083012-75083031 MsG0380015793.01.T01:intron 30.0%
AACCCATCAAATATCAAGTA+AGG + Chr3:75082148-75082167 MsG0380015793.01.T01:intron 30.0%
AATACATTCGTCAAAACCAT+AGG + Chr3:75081735-75081754 MsG0380015793.01.T01:intron 30.0%
AATCAGATGAAATTGAGATG+AGG + Chr3:75083137-75083156 MsG0380015793.01.T01:intron 30.0%
AATTTACGCAAATAGAGTGA+AGG - Chr3:75080413-75080432 None:intergenic 30.0%
AATTTGGATATGATGCTCAT+TGG + Chr3:75083913-75083932 MsG0380015793.01.T01:intron 30.0%
ACTCCTTCATAAAAACTAGT+GGG - Chr3:75080589-75080608 None:intergenic 30.0%
AGAAGAAAATCATGGAATGT+TGG + Chr3:75081707-75081726 MsG0380015793.01.T01:intron 30.0%
AGTATATGCTCAGAATTAAG+GGG + Chr3:75085421-75085440 MsG0380015793.01.T01:exon 30.0%
AGTGTTCAATCAAAGAACAT+AGG + Chr3:75082805-75082824 MsG0380015793.01.T01:intron 30.0%
AGTTAAGCATTAAAAGAAGG+AGG - Chr3:75081329-75081348 None:intergenic 30.0%
ATAAATAGGGTCAAATGGTA+AGG - Chr3:75085477-75085496 None:intergenic 30.0%
ATGGCTATAAACAGTTCTTT+GGG + Chr3:75085002-75085021 MsG0380015793.01.T01:exon 30.0%
ATTTATCCATTACACTGAGT+TGG - Chr3:75082461-75082480 None:intergenic 30.0%
CAACAATAAATAGGGTCAAA+TGG - Chr3:75085482-75085501 None:intergenic 30.0%
CAATTGTGATTCATACTTAG+AGG - Chr3:75081788-75081807 None:intergenic 30.0%
CATAGATGGTTAAGCATTTA+TGG - Chr3:75081625-75081644 None:intergenic 30.0%
CATCAAATATCAAGTAAGGA+AGG + Chr3:75082152-75082171 MsG0380015793.01.T01:intron 30.0%
CATGAGGAAAAAAAACTCAT+AGG + Chr3:75080825-75080844 MsG0380015793.01.T01:intron 30.0%
CATTTGACCCTATTTATTGT+TGG + Chr3:75085480-75085499 MsG0380015793.01.T01:exon 30.0%
CGTATTGCAGAAAACAATAA+AGG - Chr3:75083745-75083764 None:intergenic 30.0%
CTAACATCAAAAACCATCAA+GGG + Chr3:75081361-75081380 MsG0380015793.01.T01:intron 30.0%
CTCGAGAGAATGAAAAAAAA+AGG + Chr3:75083230-75083249 MsG0380015793.01.T01:intron 30.0%
CTTCAGTGAAGAATAATATG+AGG - Chr3:75084328-75084347 None:intergenic 30.0%
CTTCCTTACTTGATATTTGA+TGG - Chr3:75082154-75082173 None:intergenic 30.0%
GAAGTTTATAGGCTTCAATA+TGG - Chr3:75081195-75081214 None:intergenic 30.0%
GAATCCAACCAACAATAAAT+AGG - Chr3:75085491-75085510 None:intergenic 30.0%
GAATTGTAGGACATTTAGAA+GGG - Chr3:75085030-75085049 None:intergenic 30.0%
GACTTCAATCATTGAATCAT+TGG + Chr3:75083972-75083991 MsG0380015793.01.T01:intron 30.0%
GATTCATACTTAGAGGATTT+GGG - Chr3:75081781-75081800 None:intergenic 30.0%
GGTTGGATTCAAATTATACT+CGG + Chr3:75085501-75085520 MsG0380015793.01.T01:exon 30.0%
GTAAACTCTTCAACTCTAAT+TGG + Chr3:75085239-75085258 MsG0380015793.01.T01:exon 30.0%
GTTAACAAAGACATATCCAA+GGG - Chr3:75080008-75080027 None:intergenic 30.0%
GTTTGTTCGTCTTAAGTATT+TGG + Chr3:75080499-75080518 MsG0380015793.01.T01:intron 30.0%
TAAATAGGGTCAAATGGTAA+GGG - Chr3:75085476-75085495 None:intergenic 30.0%
TACTCCTTCATAAAAACTAG+TGG - Chr3:75080590-75080609 None:intergenic 30.0%
TATAAAGACTAAGGGAAACA+TGG + Chr3:75081124-75081143 MsG0380015793.01.T01:intron 30.0%
TATAATCATTTGCTTGATGG+AGG + Chr3:75079857-75079876 MsG0380015793.01.T01:CDS 30.0%
TATCAATGCTTAACCATCAA+TGG + Chr3:75081562-75081581 MsG0380015793.01.T01:intron 30.0%
TCAAGTGAATCTAACATCAA+AGG - Chr3:75085572-75085591 None:intergenic 30.0%
TCATATCTCATCCACATATT+TGG - Chr3:75082420-75082439 None:intergenic 30.0%
TCATCAAAGTTCCAAATATG+TGG + Chr3:75082406-75082425 MsG0380015793.01.T01:intron 30.0%
TCCCTGATAAATGAAAAGAT+GGG - Chr3:75080247-75080266 None:intergenic 30.0%
TGACAATCCATATGTAAAGA+AGG + Chr3:75082496-75082515 MsG0380015793.01.T01:intron 30.0%
TGATCTATACTGACACATAA+CGG + Chr3:75084009-75084028 MsG0380015793.01.T01:intron 30.0%
TGATTCATACTTAGAGGATT+TGG - Chr3:75081782-75081801 None:intergenic 30.0%
TGTATATGATGATCTATGAG+AGG - Chr3:75082524-75082543 None:intergenic 30.0%
TGTTAACAAAGACATATCCA+AGG - Chr3:75080009-75080028 None:intergenic 30.0%
TTCAATCAAAGAACATAGGA+TGG + Chr3:75082809-75082828 MsG0380015793.01.T01:intron 30.0%
TTTCTCACTTGTTCTCAATT+GGG - Chr3:75081262-75081281 None:intergenic 30.0%
TTTCTTCTTTGTTGCCTTAT+TGG - Chr3:75081695-75081714 None:intergenic 30.0%
TTTGGTTAATATTGGGAAGT+TGG - Chr3:75082201-75082220 None:intergenic 30.0%
TTTGGTTAGTGAAGACTATT+TGG - Chr3:75082219-75082238 None:intergenic 30.0%
! AACCCATCTTTTCATTTATC+AGG + Chr3:75080242-75080261 MsG0380015793.01.T01:CDS 30.0%
! ACCCATCTTTTCATTTATCA+GGG + Chr3:75080243-75080262 MsG0380015793.01.T01:CDS 30.0%
! AGTATTTGTAGTTCTACTTC+TGG + Chr3:75085355-75085374 MsG0380015793.01.T01:exon 30.0%
! CTGACTCGTTTAGATTATAA+AGG + Chr3:75085277-75085296 MsG0380015793.01.T01:exon 30.0%
! GAAATTCACCAATTTGAGTT+TGG + Chr3:75081068-75081087 MsG0380015793.01.T01:intron 30.0%
! GAATTTGTAACTGAGGATTT+TGG + Chr3:75085310-75085329 MsG0380015793.01.T01:exon 30.0%
! GTTAACAGGTAACTTTTCTT+CGG + Chr3:75080460-75080479 MsG0380015793.01.T01:intron 30.0%
! TTCACTGAAGCAATTTTCTA+TGG + Chr3:75084338-75084357 MsG0380015793.01.T01:CDS 30.0%
! TTTTCTCACTTGTTCTCAAT+TGG - Chr3:75081263-75081282 None:intergenic 30.0%
! TTTTGCTCAAGAAGAGATAT+AGG - Chr3:75081922-75081941 None:intergenic 30.0%
! TTTTTCTACTCGACCATTTA+CGG + Chr3:75084378-75084397 MsG0380015793.01.T01:CDS 30.0%
!! CTTAGTTCTCTATCTTTTCT+TGG + Chr3:75084807-75084826 MsG0380015793.01.T01:intron 30.0%
!! TTTTCAGGAATTTGTAACTG+AGG + Chr3:75085303-75085322 MsG0380015793.01.T01:exon 30.0%
!!! AAAGAGCATTTTGTTGTTTC+TGG - Chr3:75080121-75080140 None:intergenic 30.0%
!!! ATGTACACTAACTAGCTTTT+TGG - Chr3:75083714-75083733 None:intergenic 30.0%
!!! TGTACACTAACTAGCTTTTT+GGG - Chr3:75083713-75083732 None:intergenic 30.0%
AAACAGCATATTGTGGTTTG+TGG + Chr3:75080355-75080374 MsG0380015793.01.T01:CDS 35.0%
AAACCATAGGCAAACATAAG+TGG + Chr3:75081748-75081767 MsG0380015793.01.T01:intron 35.0%
AAATCACACCAAGGAATTGT+AGG - Chr3:75085043-75085062 None:intergenic 35.0%
AAGATGCTACTAACTTACCA+AGG - Chr3:75083776-75083795 None:intergenic 35.0%
AAGTACCAACTTCCATTCTA+AGG + Chr3:75082377-75082396 MsG0380015793.01.T01:intron 35.0%
AATCGCAAAACCCTAAGAAT+TGG + Chr3:75082921-75082940 MsG0380015793.01.T01:intron 35.0%
ACAAACTTCGCAAGAAATTC+TGG - Chr3:75085134-75085153 None:intergenic 35.0%
ACATAACACCAACCTGTTTA+TGG + Chr3:75082661-75082680 MsG0380015793.01.T01:intron 35.0%
ACATGGTATCAGAGCTATAT+TGG - Chr3:75083358-75083377 None:intergenic 35.0%
ACCATCAAAACTGTCTTCAA+AGG + Chr3:75081966-75081985 MsG0380015793.01.T01:intron 35.0%
ACTAAATAGAGCAGCACAAT+TGG + Chr3:75084929-75084948 MsG0380015793.01.T01:exon 35.0%
AGGATATACCAAAACCAAGA+AGG + Chr3:75081986-75082005 MsG0380015793.01.T01:intron 35.0%
ATAAACTTCACCATTTCCAC+TGG + Chr3:75081206-75081225 MsG0380015793.01.T01:intron 35.0%
ATAACATGTGAAGTTCACAG+TGG + Chr3:75079890-75079909 MsG0380015793.01.T01:CDS 35.0%
ATCGCAAAACCCTAAGAATT+GGG + Chr3:75082922-75082941 MsG0380015793.01.T01:intron 35.0%
ATCTCACTATCTCTTCTGTA+TGG - Chr3:75080308-75080327 None:intergenic 35.0%
ATTGAATCATTGGGCAGAAA+TGG + Chr3:75083982-75084001 MsG0380015793.01.T01:intron 35.0%
CAGAATCTGTACATGTACTT+TGG + Chr3:75085204-75085223 MsG0380015793.01.T01:exon 35.0%
CAGATTGTTGTATGTTGTTG+TGG - Chr3:75082043-75082062 None:intergenic 35.0%
CATAATGCTTAACCACCATA+AGG + Chr3:75081385-75081404 MsG0380015793.01.T01:intron 35.0%
CATACTGCTCAAATGCAAAT+TGG - Chr3:75084595-75084614 None:intergenic 35.0%
CATCTCGCATGTTCATAATT+TGG + Chr3:75083897-75083916 MsG0380015793.01.T01:intron 35.0%
CATGCCAGTTTATAAACAGA+AGG + Chr3:75080075-75080094 MsG0380015793.01.T01:CDS 35.0%
CATGGCTATAAACAGTTCTT+TGG + Chr3:75085001-75085020 MsG0380015793.01.T01:exon 35.0%
CTAAACTAGAGTTAGTAGCT+TGG - Chr3:75080945-75080964 None:intergenic 35.0%
CTAAATGTCCTACAATTCCT+TGG + Chr3:75085032-75085051 MsG0380015793.01.T01:exon 35.0%
CTCCCTGATAAATGAAAAGA+TGG - Chr3:75080248-75080267 None:intergenic 35.0%
GAAAAATGAAAGAAGCCACA+AGG - Chr3:75080391-75080410 None:intergenic 35.0%
GACAACCAATTAGGTAAAAC+TGG - Chr3:75084735-75084754 None:intergenic 35.0%
GATGGAATGGAATCAGAAAA+TGG + Chr3:75082827-75082846 MsG0380015793.01.T01:intron 35.0%
GCAAATTTCCCCAATTCTTA+GGG - Chr3:75082934-75082953 None:intergenic 35.0%
GCACAATAACAAGCCAATTA+AGG + Chr3:75081491-75081510 MsG0380015793.01.T01:intron 35.0%
GCTAACATCAAAAACCATCA+AGG + Chr3:75081360-75081379 MsG0380015793.01.T01:intron 35.0%
GCTTTATCATTCACAGTTAG+AGG + Chr3:75084957-75084976 MsG0380015793.01.T01:exon 35.0%
GGAATTGTAGGACATTTAGA+AGG - Chr3:75085031-75085050 None:intergenic 35.0%
GGCAACAAAGAAGAAAATCA+TGG + Chr3:75081699-75081718 MsG0380015793.01.T01:intron 35.0%
GGGGAAATTTGCGATAATAA+AGG + Chr3:75082942-75082961 MsG0380015793.01.T01:intron 35.0%
GTAATTAGCGTAGTTATGCT+AGG + Chr3:75084137-75084156 MsG0380015793.01.T01:intron 35.0%
GTGGAAATGGTGAAGTTTAT+AGG - Chr3:75081206-75081225 None:intergenic 35.0%
TATATTGGTATCCACCTTGA+AGG - Chr3:75083343-75083362 None:intergenic 35.0%
TCAAAGAACATAGGATGGAA+TGG + Chr3:75082814-75082833 MsG0380015793.01.T01:intron 35.0%
TCTCACTATCTCTTCTGTAT+GGG - Chr3:75080307-75080326 None:intergenic 35.0%
TGACCCTATTTATTGTTGGT+TGG + Chr3:75085484-75085503 MsG0380015793.01.T01:exon 35.0%
TGCTGCATAATTCCTTTCTT+CGG - Chr3:75081814-75081833 None:intergenic 35.0%
TTAAGCATTATGTCCCTTGA+TGG - Chr3:75081377-75081396 None:intergenic 35.0%
TTATGTGCACATGTTGATGT+TGG - Chr3:75082291-75082310 None:intergenic 35.0%
TTGAGCAGTATGCAAGATAT+CGG + Chr3:75084603-75084622 MsG0380015793.01.T01:CDS 35.0%
TTGGATACTGAAGAAGCAAA+TGG + Chr3:75085329-75085348 MsG0380015793.01.T01:exon 35.0%
TTTATGGTAGCTTCTGTCAA+TGG - Chr3:75081609-75081628 None:intergenic 35.0%
TTTCATTTATCAGGGAGTGA+TGG + Chr3:75080251-75080270 MsG0380015793.01.T01:CDS 35.0%
TTTGAGGACTCATTGTTAAC+AGG + Chr3:75080446-75080465 MsG0380015793.01.T01:CDS 35.0%
! AACAGCATATTGTGGTTTGT+GGG + Chr3:75080356-75080375 MsG0380015793.01.T01:CDS 35.0%
! ACTGAAGCAATTTTCTATGG+TGG + Chr3:75084341-75084360 MsG0380015793.01.T01:CDS 35.0%
! AGGGAGTGCATGTAAAATAT+TGG - Chr3:75079989-75080008 None:intergenic 35.0%
! AGTTGTATCCACTTTGAAGA+TGG - Chr3:75081889-75081908 None:intergenic 35.0%
! ATATTTTACATGCACTCCCT+TGG + Chr3:75079989-75080008 MsG0380015793.01.T01:intron 35.0%
! ATTGTGCTGCTCTATTTAGT+TGG - Chr3:75084929-75084948 None:intergenic 35.0%
! CAGAAGGTATAAATCTCATG+AGG - Chr3:75085088-75085107 None:intergenic 35.0%
! GGGAGTGCATGTAAAATATT+GGG - Chr3:75079988-75080007 None:intergenic 35.0%
! GTTACATGATCAGTTTTCTC+TGG - Chr3:75082093-75082112 None:intergenic 35.0%
! GTTGTATCCACTTTGAAGAT+GGG - Chr3:75081888-75081907 None:intergenic 35.0%
! TCAATTTCTCTTTTCTCCAC+AGG - Chr3:75083836-75083855 None:intergenic 35.0%
!! ACTTAGTCTTGTAATTCCCA+TGG + Chr3:75084490-75084509 MsG0380015793.01.T01:CDS 35.0%
!! AGAGGTACCTTCTTTACATA+TGG - Chr3:75082506-75082525 None:intergenic 35.0%
!! ATATTGGGAAGTTGGTAACT+TGG - Chr3:75082193-75082212 None:intergenic 35.0%
!! ATTTTCTCTAGAAAGTGCAG+CGG + Chr3:75083310-75083329 MsG0380015793.01.T01:intron 35.0%
!! CTTAGATTTGCTGGATTTCT+TGG - Chr3:75081167-75081186 None:intergenic 35.0%
!! GCAAGCAAAAAGTATTCATG+AGG + Chr3:75080809-75080828 MsG0380015793.01.T01:intron 35.0%
!! GTTAAGCTTGTTGCCTTAAT+TGG - Chr3:75081507-75081526 None:intergenic 35.0%
!! TATTGGGAAGTTGGTAACTT+GGG - Chr3:75082192-75082211 None:intergenic 35.0%
!! TCCTTTGAAGACAGTTTTGA+TGG - Chr3:75081970-75081989 None:intergenic 35.0%
!! TGCTGCTTTGATTTCTCTAT+TGG - Chr3:75082551-75082570 None:intergenic 35.0%
!! TGGTGTTATGTTTGTCTTTG+CGG - Chr3:75082652-75082671 None:intergenic 35.0%
!! TGTTGGTTTGTCTTCTGATT+TGG - Chr3:75082237-75082256 None:intergenic 35.0%
!!! ACACCCACTAGTTTTTATGA+AGG + Chr3:75080583-75080602 MsG0380015793.01.T01:intron 35.0%
!!! ATTTCCCCATTTTGAGTTTG+AGG - Chr3:75081053-75081072 None:intergenic 35.0%
!!! GAGTATTGATGACTGGTTTT+TGG - Chr3:75082584-75082603 None:intergenic 35.0%
!!! TATTGATGACTGGTTTTTGG+AGG - Chr3:75082581-75082600 None:intergenic 35.0%
!!! TTTCCCCATTTTGAGTTTGA+GGG - Chr3:75081052-75081071 None:intergenic 35.0%
!!! TTTTGTGGAGTATTGATGAC+TGG - Chr3:75082591-75082610 None:intergenic 35.0%
AACACCTCTCCTTCAATTTC+TGG - Chr3:75083024-75083043 None:intergenic 40.0%
AACAGAAGGCCACAGTTAAA+AGG + Chr3:75080089-75080108 MsG0380015793.01.T01:CDS 40.0%
AATCTCTTCTGTTGCTACTC+TGG + Chr3:75084466-75084485 MsG0380015793.01.T01:CDS 40.0%
ACAACTATACCAACCAGGTA+CGG - Chr3:75084572-75084591 None:intergenic 40.0%
AGGGAGGCTGTTAAAATAGT+TGG - Chr3:75081033-75081052 None:intergenic 40.0%
AGGTGTTCGATTCAACACAA+AGG + Chr3:75083037-75083056 MsG0380015793.01.T01:intron 40.0%
ATCCACCTTAGAATGGAAGT+TGG - Chr3:75082385-75082404 None:intergenic 40.0%
ATGGGCTTTCTTAGATTTGC+TGG - Chr3:75081176-75081195 None:intergenic 40.0%
ATTCTGCCCAAAGATGAAGT+AGG - Chr3:75085190-75085209 None:intergenic 40.0%
ATTGGACAACTATACCAACC+AGG - Chr3:75084577-75084596 None:intergenic 40.0%
ATTGTATGGGTCTCCGTAAA+TGG - Chr3:75084394-75084413 None:intergenic 40.0%
CAAGCTTAACCACCTAACAA+AGG + Chr3:75081517-75081536 MsG0380015793.01.T01:intron 40.0%
CAATCAGCAGTTTGTCTTCA+TGG + Chr3:75084677-75084696 MsG0380015793.01.T01:intron 40.0%
CATACACCAACTCAGTGTAA+TGG + Chr3:75082452-75082471 MsG0380015793.01.T01:intron 40.0%
CATGAAGACAAACTGCTGAT+TGG - Chr3:75084679-75084698 None:intergenic 40.0%
CATGATGCTTCTGTCATAGA+TGG - Chr3:75081639-75081658 None:intergenic 40.0%
CGCAAATTTCCCCAATTCTT+AGG - Chr3:75082935-75082954 None:intergenic 40.0%
CTAACATCAAAGGCTCACAA+GGG - Chr3:75085562-75085581 None:intergenic 40.0%
CTAGATGTTGAAGTCCTTCT+TGG - Chr3:75082003-75082022 None:intergenic 40.0%
CTCTGAGTATAGTTTCTGCT+TGG - Chr3:75081453-75081472 None:intergenic 40.0%
CTGGATTCGATTTCAATCTC+AGG - Chr3:75083005-75083024 None:intergenic 40.0%
CTTCTTCTCACAATCACTCA+TGG - Chr3:75082719-75082738 None:intergenic 40.0%
CTTTGAACCCATCTTCAAAG+TGG + Chr3:75081878-75081897 MsG0380015793.01.T01:intron 40.0%
GAATCCAGAAATTGAAGGAG+AGG + Chr3:75083017-75083036 MsG0380015793.01.T01:intron 40.0%
GATACTGAAGAAGCAAATGG+AGG + Chr3:75085332-75085351 MsG0380015793.01.T01:exon 40.0%
GCTAGAATCAACAAGCCATA+AGG + Chr3:75081413-75081432 MsG0380015793.01.T01:intron 40.0%
GCTCAAGAAGAGATATAGGT+TGG - Chr3:75081918-75081937 None:intergenic 40.0%
GGAGTCAAAACAGCATATTG+TGG + Chr3:75080348-75080367 MsG0380015793.01.T01:CDS 40.0%
GGTTCATTCACTCATTCACA+TGG - Chr3:75082325-75082344 None:intergenic 40.0%
GTAATTCCCATGGTCACTAT+GGG + Chr3:75084500-75084519 MsG0380015793.01.T01:CDS 40.0%
GTGGCCTTCTGTTTATAAAC+TGG - Chr3:75080082-75080101 None:intergenic 40.0%
GTTATTGTGCTTCTGTCAAG+TGG - Chr3:75081481-75081500 None:intergenic 40.0%
GTTGCAGTGTCCAATTGTAT+GGG - Chr3:75084407-75084426 None:intergenic 40.0%
GTTGGCAGAATGTGTTATGA+TGG - Chr3:75082273-75082292 None:intergenic 40.0%
GTTTATAGCCATGTTGTGAG+AGG - Chr3:75084994-75085013 None:intergenic 40.0%
TCACAATTGCAACCGAAGAA+AGG + Chr3:75081799-75081818 MsG0380015793.01.T01:intron 40.0%
TCGCAAAACCCTAAGAATTG+GGG + Chr3:75082923-75082942 MsG0380015793.01.T01:intron 40.0%
TCTAACATCAAAGGCTCACA+AGG - Chr3:75085563-75085582 None:intergenic 40.0%
TGAAAGTCGTCACCATAAAC+AGG - Chr3:75082676-75082695 None:intergenic 40.0%
TGAGTATAGTTTCTGCTTGG+TGG - Chr3:75081450-75081469 None:intergenic 40.0%
TGATGACATCCACCTTAGAA+TGG - Chr3:75082392-75082411 None:intergenic 40.0%
TGTAATTCCCATGGTCACTA+TGG + Chr3:75084499-75084518 MsG0380015793.01.T01:CDS 40.0%
TGTCCACTTATGTTTGCCTA+TGG - Chr3:75081754-75081773 None:intergenic 40.0%
TTCTGCCCAAAGATGAAGTA+GGG - Chr3:75085189-75085208 None:intergenic 40.0%
TTGCGGTTCAGTGTTTGAAT+TGG - Chr3:75082635-75082654 None:intergenic 40.0%
TTTACGGAGACCCATACAAT+TGG + Chr3:75084394-75084413 MsG0380015793.01.T01:CDS 40.0%
! AGATTTTCTGTCCCAGTTGA+CGG - Chr3:75084451-75084470 None:intergenic 40.0%
! ATGATGCTCATTGGTTGACT+TGG + Chr3:75083922-75083941 MsG0380015793.01.T01:intron 40.0%
! ATGTGTTTGGGACTGTTGTT+AGG + Chr3:75083856-75083875 MsG0380015793.01.T01:intron 40.0%
! CAAGAAGAGATATAGGTTGG+AGG - Chr3:75081915-75081934 None:intergenic 40.0%
! CACTTTGAAGATGGGTTCAA+AGG - Chr3:75081880-75081899 None:intergenic 40.0%
! GACTTCAACATCTAGCTCAT+TGG + Chr3:75082008-75082027 MsG0380015793.01.T01:intron 40.0%
! GATCAAACCCCTTGTTTATG+GGG + Chr3:75085443-75085462 MsG0380015793.01.T01:exon 40.0%
! GGATCAAACCCCTTGTTTAT+GGG + Chr3:75085442-75085461 MsG0380015793.01.T01:exon 40.0%
! GTGGTTAAGCTTTTGCCTTA+TGG - Chr3:75081431-75081450 None:intergenic 40.0%
! GTTGAAGTCCTTCTTGGTTT+TGG - Chr3:75081997-75082016 None:intergenic 40.0%
! TACCAACTTCCATTCTAAGG+TGG + Chr3:75082380-75082399 MsG0380015793.01.T01:intron 40.0%
! TCATGAAGATTAGAGCACCA+AGG + Chr3:75082120-75082139 MsG0380015793.01.T01:intron 40.0%
! TGTGTTTGGGACTGTTGTTA+GGG + Chr3:75083857-75083876 MsG0380015793.01.T01:intron 40.0%
! TTATTGTTGTTCTCTGGCAC+TGG - Chr3:75080194-75080213 None:intergenic 40.0%
!! ACTGAGTTGGTGTATGCTAT+GGG - Chr3:75082448-75082467 None:intergenic 40.0%
!! ATTTGATGGGTTGTGATCCT+TGG - Chr3:75082140-75082159 None:intergenic 40.0%
!! GAATGGAAGTTGGTACTTGT+TGG - Chr3:75082375-75082394 None:intergenic 40.0%
!! GTTCAAAGGCTCTTGGTTTT+GGG - Chr3:75081866-75081885 None:intergenic 40.0%
!! TGATTCTAGCTTCTGCCTTA+TGG - Chr3:75081403-75081422 None:intergenic 40.0%
!! TGCTCTTTTTGTTGTCTCTG+AGG + Chr3:75080133-75080152 MsG0380015793.01.T01:CDS 40.0%
!! TGGAACCTTCCTTTTAACTG+TGG - Chr3:75080101-75080120 None:intergenic 40.0%
!! TTGTTGCCTTATTGGCTTTG+TGG - Chr3:75081687-75081706 None:intergenic 40.0%
AAACCTCTCTTATGCGTTGC+TGG + Chr3:75081300-75081319 MsG0380015793.01.T01:intron 45.0%
AACGGAATTGCAGACCATGA+AGG - Chr3:75084635-75084654 None:intergenic 45.0%
AACTTCACCATTTCCACTGG+TGG + Chr3:75081209-75081228 MsG0380015793.01.T01:intron 45.0%
ACACCCCCTACTTCATCTTT+GGG + Chr3:75085181-75085200 MsG0380015793.01.T01:exon 45.0%
ACCAAACCCATAGTGACCAT+GGG - Chr3:75084509-75084528 None:intergenic 45.0%
ACCAGATGCAAATCACACCA+AGG - Chr3:75085052-75085071 None:intergenic 45.0%
ACTTGGACCCCATAAACAAG+GGG - Chr3:75085453-75085472 None:intergenic 45.0%
AGCCTCCCTCAAACTCAAAA+TGG + Chr3:75081044-75081063 MsG0380015793.01.T01:intron 45.0%
AGCTCACCACAAAGCCAATA+AGG + Chr3:75081678-75081697 MsG0380015793.01.T01:intron 45.0%
AGTCGTCACCATAAACAGGT+TGG - Chr3:75082672-75082691 None:intergenic 45.0%
ATCTCATGAGGAAGCTTGAC+AGG - Chr3:75085076-75085095 None:intergenic 45.0%
CACTATCTCTTCTGTATGGG+CGG - Chr3:75080304-75080323 None:intergenic 45.0%
CCACAAACGAAATCGTGAAC+TGG + Chr3:75083076-75083095 MsG0380015793.01.T01:intron 45.0%
CCAGTTCACGATTTCGTTTG+TGG - Chr3:75083079-75083098 None:intergenic 45.0%
CCTCCCTCAAACTCAAAATG+GGG + Chr3:75081046-75081065 MsG0380015793.01.T01:intron 45.0%
CGTGACACTTCTTCCATTGA+TGG - Chr3:75081578-75081597 None:intergenic 45.0%
CGTTGCAGTGTCCAATTGTA+TGG - Chr3:75084408-75084427 None:intergenic 45.0%
GAAGGCCACAGTTAAAAGGA+AGG + Chr3:75080093-75080112 MsG0380015793.01.T01:CDS 45.0%
GAATTGGTTGCTACGTTCTG+AGG - Chr3:75082619-75082638 None:intergenic 45.0%
GACTTGGACCCCATAAACAA+GGG - Chr3:75085454-75085473 None:intergenic 45.0%
GATATCGGAAGTCACCTTCA+TGG + Chr3:75084618-75084637 MsG0380015793.01.T01:CDS 45.0%
GCAACTTACACCCTTCAACT+TGG - Chr3:75079959-75079978 None:intergenic 45.0%
GCAGCGGAAAATATCCTTCA+AGG + Chr3:75083326-75083345 MsG0380015793.01.T01:intron 45.0%
GCCTCCCTCAAACTCAAAAT+GGG + Chr3:75081045-75081064 MsG0380015793.01.T01:intron 45.0%
GCGGAAAATATCCTTCAAGG+TGG + Chr3:75083329-75083348 MsG0380015793.01.T01:intron 45.0%
GCGTAGTTATGCTAGGACAT+TGG + Chr3:75084144-75084163 MsG0380015793.01.T01:intron 45.0%
GTGCACATTGTAGCAGACAA+GGG - Chr3:75080534-75080553 None:intergenic 45.0%
GTTGTTAGGGAATGATGCCA+GGG + Chr3:75083870-75083889 MsG0380015793.01.T01:intron 45.0%
TCATCTTCCACCAGTGGAAA+TGG - Chr3:75081219-75081238 None:intergenic 45.0%
TCTCATGAGGAAGCTTGACA+GGG - Chr3:75085075-75085094 None:intergenic 45.0%
TCTGCCCAAAGATGAAGTAG+GGG - Chr3:75085188-75085207 None:intergenic 45.0%
TGGTGAGCTTCTGTCTATGA+TGG - Chr3:75081667-75081686 None:intergenic 45.0%
TGGTTGCTTCTGCCTTTGTT+AGG - Chr3:75081532-75081551 None:intergenic 45.0%
TGTGCACATTGTAGCAGACA+AGG - Chr3:75080535-75080554 None:intergenic 45.0%
TGTTGTTAGGGAATGATGCC+AGG + Chr3:75083869-75083888 MsG0380015793.01.T01:intron 45.0%
TTGCTTCTGCCTTTGTTAGG+TGG - Chr3:75081529-75081548 None:intergenic 45.0%
! AACATGCGAGATGTTTTCCC+TGG - Chr3:75083890-75083909 None:intergenic 45.0%
! AAGATGGGTTCAAAGGCTCT+TGG - Chr3:75081873-75081892 None:intergenic 45.0%
! ATTTTCTGTCCCAGTTGACG+GGG - Chr3:75084449-75084468 None:intergenic 45.0%
! GATTTTCTGTCCCAGTTGAC+GGG - Chr3:75084450-75084469 None:intergenic 45.0%
! GGGATCAAACCCCTTGTTTA+TGG + Chr3:75085441-75085460 MsG0380015793.01.T01:exon 45.0%
! GGTTCAAAGGCTCTTGGTTT+TGG - Chr3:75081867-75081886 None:intergenic 45.0%
! TCCTTGGTGTGATTTGCATC+TGG + Chr3:75085048-75085067 MsG0380015793.01.T01:exon 45.0%
! TGAGTTGACCTCTCACAACA+TGG + Chr3:75084983-75085002 MsG0380015793.01.T01:exon 45.0%
!! CACTGAGTTGGTGTATGCTA+TGG - Chr3:75082449-75082468 None:intergenic 45.0%
!! TGAAAAGATGGGTTGCTAGC+AGG - Chr3:75080236-75080255 None:intergenic 45.0%
!! TTCTAGCTTCTGCCTTATGG+TGG - Chr3:75081400-75081419 None:intergenic 45.0%
!!! CGTTCTGAGGATGCATTTTG+TGG - Chr3:75082606-75082625 None:intergenic 45.0%
AAAGAAGCCACAAGGACTGC+AGG - Chr3:75080383-75080402 None:intergenic 50.0%
AAGAAGCCACAAGGACTGCA+GGG - Chr3:75080382-75080401 None:intergenic 50.0%
AAGCCAGCAACGCATAAGAG+AGG - Chr3:75081306-75081325 None:intergenic 50.0%
AATTGGGCATCTTCCACCAG+TGG - Chr3:75081246-75081265 None:intergenic 50.0%
CACACCCCCTACTTCATCTT+TGG + Chr3:75085180-75085199 MsG0380015793.01.T01:exon 50.0%
CTGCCCAAAGATGAAGTAGG+GGG - Chr3:75085187-75085206 None:intergenic 50.0%
CTTAAGGGTTTGTCTGCGCA+TGG + Chr3:75079931-75079950 MsG0380015793.01.T01:CDS 50.0%
GACCAAACCCATAGTGACCA+TGG - Chr3:75084510-75084529 None:intergenic 50.0%
GGAAGATGATGATCCACTGG+TGG + Chr3:75081230-75081249 MsG0380015793.01.T01:intron 50.0%
GGACTTGGACCCCATAAACA+AGG - Chr3:75085455-75085474 None:intergenic 50.0%
GGATCATCATCTTCCACCAG+TGG - Chr3:75081225-75081244 None:intergenic 50.0%
GGGTCAAATGGTAAGGGACT+TGG - Chr3:75085470-75085489 None:intergenic 50.0%
GGTGGAAGATGATGATCCAC+TGG + Chr3:75081227-75081246 MsG0380015793.01.T01:intron 50.0%
TCACTCATGGTGTGCACATG+AGG - Chr3:75082706-75082725 None:intergenic 50.0%
TCCCATGGTCACTATGGGTT+TGG + Chr3:75084505-75084524 MsG0380015793.01.T01:CDS 50.0%
TGCAATACGGATGCACTCCT+TGG + Chr3:75083756-75083775 MsG0380015793.01.T01:intron 50.0%
TGCATCGTTGTGGAAGCAGA+AGG - Chr3:75085104-75085123 None:intergenic 50.0%
TGGACTTCACTGCATCGTTG+TGG - Chr3:75085114-75085133 None:intergenic 50.0%
! GCGCATGGATCCAAGTTGAA+GGG + Chr3:75079946-75079965 MsG0380015793.01.T01:intron 50.0%
! TCAGGGAGTGATGGAAAACC+AGG + Chr3:75080260-75080279 MsG0380015793.01.T01:CDS 50.0%
! TGCGCATGGATCCAAGTTGA+AGG + Chr3:75079945-75079964 MsG0380015793.01.T01:intron 50.0%
! TGGTCACTATGGGTTTGGTC+TGG + Chr3:75084510-75084529 MsG0380015793.01.T01:CDS 50.0%
!! GGGAAGTTGGTAACTTGGGT+TGG - Chr3:75082188-75082207 None:intergenic 50.0%
!!! CCCCATTTTGAGTTTGAGGG+AGG - Chr3:75081049-75081068 None:intergenic 50.0%
ACTCTTGCTCCGTACCTGGT+TGG + Chr3:75084560-75084579 MsG0380015793.01.T01:CDS 55.0%
CAGGTACGGAGCAAGAGTTG+CGG - Chr3:75084558-75084577 None:intergenic 55.0%
GATACACTGCCCCGTCAACT+GGG + Chr3:75084437-75084456 MsG0380015793.01.T01:CDS 55.0%
TGATACACTGCCCCGTCAAC+TGG + Chr3:75084436-75084455 MsG0380015793.01.T01:CDS 55.0%
! CTATGGGTTTGGTCTGGCCA+TGG + Chr3:75084516-75084535 MsG0380015793.01.T01:CDS 55.0%
! TTGTTCTCTGGCACTGGAGC+AGG - Chr3:75080188-75080207 None:intergenic 55.0%
AGCAAGAGTTGCGGAGGCTG+CGG - Chr3:75084549-75084568 None:intergenic 60.0%
CGCAACTCTTGCTCCGTACC+TGG + Chr3:75084556-75084575 MsG0380015793.01.T01:CDS 60.0%
GTACGGAGCAAGAGTTGCGG+AGG - Chr3:75084555-75084574 None:intergenic 60.0%
! GGTTTGGTCTGGCCATGGAC+TGG + Chr3:75084521-75084540 MsG0380015793.01.T01:CDS 60.0%
CAAGAGTTGCGGAGGCTGCG+GGG - Chr3:75084547-75084566 None:intergenic 65.0%
GCAAGAGTTGCGGAGGCTGC+GGG - Chr3:75084548-75084567 None:intergenic 65.0%
TGTGGGCCCTGCAGTCCTTG+TGG + Chr3:75080373-75080392 MsG0380015793.01.T01:CDS 65.0%
GAGGCTGCGGGGCCAGTCCA+TGG - Chr3:75084536-75084555 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 75079822 75085620 75079822 ID=MsG0380015793.01;
Chr3 mRNA 75079822 75085620 75079822 ID=MsG0380015793.01.T01;Parent=MsG0380015793.01
Chr3 exon 75079822 75079959 75079822 ID=MsG0380015793.01.T01.exon;Parent=MsG0380015793.01.T01
Chr3 CDS 75079854 75079959 75079854 ID=MsG0380015793.01.T01.cds;Parent=MsG0380015793.01.T01
Chr3 CDS 75080057 75080467 75080057 ID=MsG0380015793.01.T01.cds;Parent=MsG0380015793.01.T01
Chr3 exon 75080057 75080467 75080057 ID=MsG0380015793.01.T01.exon;Parent=MsG0380015793.01.T01
Chr3 CDS 75084321 75084664 75084321 ID=MsG0380015793.01.T01.cds;Parent=MsG0380015793.01.T01
Chr3 exon 75084321 75084664 75084321 ID=MsG0380015793.01.T01.exon;Parent=MsG0380015793.01.T01
Chr3 CDS 75084912 75085127 75084912 ID=MsG0380015793.01.T01.cds;Parent=MsG0380015793.01.T01
Chr3 exon 75084912 75085620 75084912 ID=MsG0380015793.01.T01.exon;Parent=MsG0380015793.01.T01
Gene Sequence

>MsG0380015793.01.T01

ATGTATAATCATTTGCTTGATGGAGGTTGTTTTTGCATAACATGTGAAGTTCACAGTGGTCATAGCACAATTCAAATCTTAAGGGTTTGTCTGCGCATGGATCCAATATCATGGTTAGACAAATCATGCCAGTTTATAAACAGAAGGCCACAGTTAAAAGGAAGGTTCCAGAAACAACAAAATGCTCTTTTTGTTGTCTCTGAGGATCAGTCACAAAATAATGAGCTTGAAATACCTGCTCCAGTGCCAGAGAACAACAATAATATTACTCAAGACATCTCTCCTGCTAGCAACCCATCTTTTCATTTATCAGGGAGTGATGGAAAACCAGGTTTCATATCATTTTATAACCGCCCATACAGAAGAGATAGTGAGATTCTTTTATTGAATTCAGAGAGGAGTCAAAACAGCATATTGTGGTTTGTGGGCCCTGCAGTCCTTGTGGCTTCTTTCATTTTTCCTTCACTCTATTTGCGTAAATTGCTTTCAATCATTTTTGAGGACTCATTGTTAACAGATTTCCTCATATTATTCTTCACTGAAGCAATTTTCTATGGTGGTGTTGCTGTATTTCTTTTTCTACTCGACCATTTACGGAGACCCATACAATTGGACACTGCAACGAAAAATACTGATACACTGCCCCGTCAACTGGGACAGAAAATCTCTTCTGTTGCTACTCTGGTACTTAGTCTTGTAATTCCCATGGTCACTATGGGTTTGGTCTGGCCATGGACTGGCCCCGCAGCCTCCGCAACTCTTGCTCCGTACCTGGTTGGTATAGTTGTCCAATTTGCATTTGAGCAGTATGCAAGATATCGGAAGTCACCTTCATGGTCTGCAATTCCGTTAATCTTTCAAGTGTATAGGCTGCACCAACTAAATAGAGCAGCACAATTGGTGACAGCTTTATCATTCACAGTTAGAGGAGCTGAGTTGACCTCTCACAACATGGCTATAAACAGTTCTTTGGGCACCCTTCTAAATGTCCTACAATTCCTTGGTGTGATTTGCATCTGGTCCCTGTCAAGCTTCCTCATGAGATTTATACCTTCTGCTTCCACAACGATGCAGTGA

Protein sequence

>MsG0380015793.01.T01

MYNHLLDGGCFCITCEVHSGHSTIQILRVCLRMDPISWLDKSCQFINRRPQLKGRFQKQQNALFVVSEDQSQNNELEIPAPVPENNNNITQDISPASNPSFHLSGSDGKPGFISFYNRPYRRDSEILLLNSERSQNSILWFVGPAVLVASFIFPSLYLRKLLSIIFEDSLLTDFLILFFTEAIFYGGVAVFLFLLDHLRRPIQLDTATKNTDTLPRQLGQKISSVATLVLSLVIPMVTMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYARYRKSPSWSAIPLIFQVYRLHQLNRAAQLVTALSFTVRGAELTSHNMAINSSLGTLLNVLQFLGVICIWSLSSFLMRFIPSASTTMQ*