AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028845.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028845.01.T01 MTR_5g076440 77.287 951 135 7 1 904 1 917 0.0 1442
MsG0580028845.01.T01 MTR_5g076380 61.322 923 257 14 12 880 6 882 0.0 1067
MsG0580028845.01.T01 MTR_5g076500 64.013 892 233 11 17 868 7 850 0.0 1064
MsG0580028845.01.T01 MTR_5g076310 57.204 937 252 14 13 879 2 859 0.0 969
MsG0580028845.01.T01 MTR_3g064190 53.947 912 314 14 22 875 15 878 0.0 899
MsG0580028845.01.T01 MTR_5g076330 52.765 904 337 13 22 875 10 873 0.0 894
MsG0580028845.01.T01 MTR_5g076320 52.559 938 295 16 6 863 13 880 0.0 890
MsG0580028845.01.T01 MTR_5g076300 51.274 903 356 14 22 868 17 891 0.0 877
MsG0580028845.01.T01 MTR_3g064210 41.604 935 443 18 25 860 16 946 0.0 649
MsG0580028845.01.T01 MTR_3g436400 33.080 922 473 21 21 859 17 877 1.39e-140 457
MsG0580028845.01.T01 MTR_0189s0030 34.318 880 460 19 51 853 8 846 2.56e-138 456
MsG0580028845.01.T01 MTR_3g078040 68.246 211 61 3 43 252 56 261 7.83e-95 300
MsG0580028845.01.T01 MTR_4g061370 82.692 104 18 0 43 146 527 630 1.19e-44 176
MsG0580028845.01.T01 MTR_8g063020 78.641 103 21 1 31 133 188 289 6.04e-42 157
MsG0580028845.01.T01 MTR_8g020390 30.915 317 168 8 565 836 456 766 2.37e-32 135
MsG0580028845.01.T01 MTR_8g020390 30.990 313 165 8 565 832 744 1050 4.35e-32 135
MsG0580028845.01.T01 MTR_8g020390 30.990 313 165 8 565 832 961 1267 9.02e-32 134
MsG0580028845.01.T01 MTR_5g053930 34.583 240 153 4 569 807 450 686 1.18e-29 127
MsG0580028845.01.T01 MTR_1g052700 36.139 202 126 3 607 807 41 240 3.89e-28 117
MsG0580028845.01.T01 MTR_2g105760 36.226 265 139 9 566 807 1741 1998 4.81e-27 119
MsG0580028845.01.T01 MTR_5g013820 31.034 232 150 5 576 804 617 841 2.27e-21 100
MsG0580028845.01.T01 MTR_5g013820 31.034 232 150 5 576 804 617 841 2.45e-21 100
MsG0580028845.01.T01 MTR_7g092200 35.714 238 125 13 579 804 350 571 2.13e-14 77.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028845.01.T01 AT1G65810 40.991 888 385 15 22 842 22 837 0.0 623
MsG0580028845.01.T01 AT1G65810 40.991 888 385 15 22 842 22 837 0.0 623
MsG0580028845.01.T01 AT1G65810 40.991 888 385 15 22 842 22 837 0.0 622
MsG0580028845.01.T01 AT5G37150 39.448 905 415 18 15 863 2 829 0.0 583
MsG0580028845.01.T01 AT1G65780 40.178 901 432 19 22 858 11 868 0.0 580
MsG0580028845.01.T01 AT4G05540 43.988 682 318 17 138 807 11 640 7.63e-163 492
MsG0580028845.01.T01 AT5G52090 42.614 704 308 15 191 847 1 655 5.62e-162 489
MsG0580028845.01.T01 AT5G37140 42.185 723 321 17 186 863 12 682 1.85e-160 486
MsG0580028845.01.T01 AT5G37165 44.731 427 180 10 482 863 1 416 2.74e-95 306
MsG0580028845.01.T01 AT5G37030 51.034 290 98 4 598 844 348 636 5.52e-82 278
MsG0580028845.01.T01 AT5G37030 36.675 379 197 8 15 390 2 340 1.56e-59 215
MsG0580028845.01.T01 AT5G37160 35.407 418 215 12 28 405 24 426 4.58e-64 223
MsG0580028845.01.T01 AT4G15570 33.610 241 155 5 569 807 365 602 3.15e-29 125
MsG0580028845.01.T01 AT4G15570 33.610 241 155 5 569 807 365 602 3.15e-29 125
MsG0580028845.01.T01 AT4G15570 33.610 241 155 5 569 807 454 691 3.69e-29 125
MsG0580028845.01.T01 AT4G15570 33.610 241 155 5 569 807 454 691 3.69e-29 125
MsG0580028845.01.T01 AT2G19120 29.032 310 175 7 565 832 741 1047 5.13e-29 125
MsG0580028845.01.T01 AT4G30100 29.642 307 169 8 565 828 904 1206 9.64e-29 125
MsG0580028845.01.T01 AT4G30100 29.642 307 169 8 565 828 904 1206 9.64e-29 125
MsG0580028845.01.T01 AT1G16800 32.422 256 153 6 569 807 1672 1924 5.19e-24 110
MsG0580028845.01.T01 AT1G16800 32.422 256 153 6 569 807 1602 1854 5.51e-24 109
MsG0580028845.01.T01 AT1G16800 32.422 256 153 6 569 807 1560 1812 7.07e-24 109
MsG0580028845.01.T01 AT5G47010 30.672 238 155 5 570 804 623 853 1.79e-22 104
MsG0580028845.01.T01 AT2G03270 33.471 242 137 11 573 804 339 566 1.48e-16 84.7
MsG0580028845.01.T01 AT1G05460 28.000 250 153 10 573 807 512 749 3.61e-13 74.3
MsG0580028845.01.T01 AT1G05460 28.112 249 152 10 574 807 513 749 3.88e-13 74.3
MsG0580028845.01.T01 AT5G35970 29.317 249 145 9 574 804 638 873 8.04e-12 70.1

Find 135 sgRNAs with CRISPR-Local

Find 219 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATTCCTCTAGGGATTTA+TGG 0.101203 5:+87501219 None:intergenic
TCCTTCTGTGTACAGTTTAA+TGG 0.146134 5:+87500659 None:intergenic
TGACAACAAATATTCGTATT+TGG 0.189870 5:-87502155 MsG0580028845.01.T01:CDS
ATGCTAATGTCAAACTTATA+TGG 0.200884 5:-87501607 MsG0580028845.01.T01:CDS
CTTCAACATTGCATTCTTAT+AGG 0.222588 5:-87500552 MsG0580028845.01.T01:CDS
AGCTGCAAAGTTTGCATGTT+TGG 0.229288 5:-87501737 MsG0580028845.01.T01:CDS
TAGCCAATAGTGATTCTATT+TGG 0.229657 5:-87499609 MsG0580028845.01.T01:CDS
ATTTGATAGAACAAGGATTT+TGG 0.230297 5:+87502432 None:intergenic
CTCTCATTGTCATAGTAAAT+AGG 0.264935 5:+87499013 None:intergenic
CTTGAATTGCTCAGGTCTAT+TGG 0.288768 5:-87500903 MsG0580028845.01.T01:CDS
GACCTATATTCAAACTTATT+AGG 0.290148 5:-87502519 MsG0580028845.01.T01:CDS
CAGTGCTTTGCTCCATTAAC+TGG 0.292054 5:-87501314 MsG0580028845.01.T01:CDS
GTCTGCTTCCAACCAGTTAA+TGG 0.298206 5:+87501302 None:intergenic
TTTCGGCAAGTGTGTGTATA+AGG 0.301266 5:+87500968 None:intergenic
AGTTTGTAAAGAAGAGATTT+CGG 0.307316 5:-87501025 MsG0580028845.01.T01:CDS
GTTTGTAAAGAAGAGATTTC+GGG 0.309508 5:-87501024 MsG0580028845.01.T01:CDS
AAGAAGTATGTTTGAGAGAT+TGG 0.310939 5:-87500371 MsG0580028845.01.T01:CDS
TCTTGGGATCATTAAGAAAC+TGG 0.313738 5:+87501264 None:intergenic
GCTAAGGGTAAAGAGAAATT+TGG 0.314735 5:-87500163 MsG0580028845.01.T01:CDS
ATTGCTGATAATTGTGGATT+TGG 0.318750 5:-87500394 MsG0580028845.01.T01:CDS
CTTGGTCCTCTAGGTTTCCT+TGG 0.324989 5:+87499246 None:intergenic
TCAAACATAATTCCTCCTTT+TGG 0.325376 5:-87499060 MsG0580028845.01.T01:three_prime_UTR
TATAATAAAAGTTTCCTTGA+TGG 0.331006 5:-87500220 MsG0580028845.01.T01:CDS
TGTGTACAGTTTAATGGAAC+TGG 0.349047 5:+87500665 None:intergenic
TTTGAGAGATTGGTATTGTT+AGG 0.349863 5:-87500361 MsG0580028845.01.T01:CDS
AATGCAAACCTAGTATTCTA+AGG 0.351033 5:+87500778 None:intergenic
GTTAGTGTTCGTTCTGTTGA+CGG 0.352563 5:-87499845 MsG0580028845.01.T01:CDS
TGCTAATGTCAAACTTATAT+GGG 0.352761 5:-87501606 MsG0580028845.01.T01:CDS
GCAAGTGAAATGAAAGATTT+CGG 0.359478 5:+87500951 None:intergenic
TTAGGTGACATTGTGCTCTT+TGG 0.361737 5:-87501416 MsG0580028845.01.T01:CDS
TCTCATTGTCATAGTAAATA+GGG 0.369856 5:+87499014 None:intergenic
GCAATGAGATCTCCAGCTTC+TGG 0.370895 5:+87502369 None:intergenic
TGCCGATGAGGACAAGAAAT+TGG 0.375041 5:-87499542 MsG0580028845.01.T01:CDS
TTTCCAAATAGAATCACTAT+TGG 0.383545 5:+87499606 None:intergenic
CCATCTATTTCAGAGTTAGA+TGG 0.383664 5:+87500804 None:intergenic
ATATGGGGACCACCAGGAAC+TGG 0.396342 5:-87501590 MsG0580028845.01.T01:CDS
GATGGTTTCCTTAGAATACT+AGG 0.397818 5:-87500786 MsG0580028845.01.T01:CDS
CTCTAGCAGTGGAGGCATAA+AGG 0.400028 5:+87502554 None:intergenic
CTTGAACCTGGCTTGATACA+AGG 0.400444 5:+87500875 None:intergenic
ATTATTCTTCCTGAACTCAA+TGG 0.411055 5:-87500747 MsG0580028845.01.T01:CDS
AAGGTTGCATAGTTTAGTTA+TGG 0.412898 5:-87501465 MsG0580028845.01.T01:CDS
CACTTGCAAAACTGCAGTAT+TGG 0.413346 5:+87501493 None:intergenic
GAGCATGATACGTATGGATT+AGG 0.418146 5:-87501434 MsG0580028845.01.T01:CDS
TATTTGTTGTCATGTTCATC+AGG 0.419253 5:+87502166 None:intergenic
CCATCTAACTCTGAAATAGA+TGG 0.419828 5:-87500804 MsG0580028845.01.T01:CDS
TTCGAGCTCTTGAATTGCTC+AGG 0.420986 5:-87500911 MsG0580028845.01.T01:CDS
AGGTAAACTGCATACATCTT+TGG 0.423455 5:+87502186 None:intergenic
TTCAGGAAGAATAATTGAAC+TGG 0.424783 5:+87500755 None:intergenic
TTCTGATGCTCCGGCTGTCA+TGG 0.430761 5:-87500251 MsG0580028845.01.T01:CDS
TGAACTCTCCCATTGAGTTC+AGG 0.433268 5:+87500738 None:intergenic
ATTCAAGTCATCTACTCTCT+TGG 0.434569 5:+87502329 None:intergenic
GATAATTCAAAACCTTAGAA+AGG 0.445622 5:-87500089 MsG0580028845.01.T01:CDS
TTCAAGTCATCTACTCTCTT+GGG 0.449605 5:+87502330 None:intergenic
TTATTCTTCCTGAACTCAAT+GGG 0.459864 5:-87500746 MsG0580028845.01.T01:CDS
TAGTAAATAGGGCAAAACTA+TGG 0.462352 5:+87499025 None:intergenic
GTAGACAGTTATCCCGGTCT+TGG 0.464899 5:-87501374 MsG0580028845.01.T01:CDS
TTTCATTAACAAATTCCTCT+AGG 0.467334 5:+87501210 None:intergenic
TGTGAGAAATCAGAAATTGA+TGG 0.468829 5:-87499442 MsG0580028845.01.T01:CDS
AGGTGATGAGAAACAACTTC+CGG 0.477819 5:-87500532 MsG0580028845.01.T01:CDS
TGGAGATCTCATTGCTTTCA+CGG 0.477848 5:-87502361 MsG0580028845.01.T01:CDS
TTCTAAATCAAAATCTCTAC+AGG 0.481687 5:-87503149 MsG0580028845.01.T01:CDS
TGATTCACGAGCTTCATACT+TGG 0.481844 5:+87499228 None:intergenic
GGAAAATATGAACCAGAAGC+TGG 0.483286 5:-87502381 MsG0580028845.01.T01:CDS
CTCATCCGATTCATATTCCT+CGG 0.484865 5:+87501082 None:intergenic
TGCGCGGTGTTCGTTCGCTA+AGG 0.487540 5:-87499203 MsG0580028845.01.T01:CDS
TTCATTAACAAATTCCTCTA+GGG 0.487542 5:+87501211 None:intergenic
GATGACGAGAATGCAGCTCT+TGG 0.488635 5:-87503210 MsG0580028845.01.T01:CDS
GGAGTCAGAGGGCGAACACC+TGG 0.497458 5:-87502118 MsG0580028845.01.T01:CDS
AATAACATAAGCAACATTGT+AGG 0.500024 5:+87502293 None:intergenic
ATAATTCAAAACCTTAGAAA+GGG 0.501489 5:-87500088 MsG0580028845.01.T01:intron
GCTCTTTCATTGCAGCTACC+AGG 0.502301 5:-87500576 MsG0580028845.01.T01:CDS
GTTGGAGAATTAAAAGTCTC+GGG 0.502680 5:+87502591 None:intergenic
AGCTTCATACTTGGTCCTCT+AGG 0.507568 5:+87499237 None:intergenic
AGCCAATTTCTTGTCCTCAT+CGG 0.512736 5:+87499540 None:intergenic
CTCCTAATAAGTTTGAATAT+AGG 0.515771 5:+87502517 None:intergenic
TGTTGGAGAATTAAAAGTCT+CGG 0.516648 5:+87502590 None:intergenic
AAATTGATGGTTCTTCCTCT+AGG 0.520805 5:-87499429 MsG0580028845.01.T01:intron
AATTGAAAGTTTCATGACAC+TGG 0.522790 5:-87501051 MsG0580028845.01.T01:CDS
CATTGCCGAGGAATATGAAT+CGG 0.523952 5:-87501087 MsG0580028845.01.T01:CDS
AACTGGTTGGAAGCAGACCT+TGG 0.525160 5:-87501297 MsG0580028845.01.T01:CDS
GAATATCCTTGTATCAAGCC+AGG 0.528351 5:-87500881 MsG0580028845.01.T01:CDS
TCTTGTCCTCATCGGCATCA+TGG 0.528366 5:+87499548 None:intergenic
AAGCAAACATTTCTCCATCA+AGG 0.528385 5:+87500206 None:intergenic
TCACTTGAGCATGATACGTA+TGG 0.529728 5:-87501440 MsG0580028845.01.T01:CDS
ACAAAGAAGAAAGTTAGCAT+TGG 0.535667 5:-87499953 MsG0580028845.01.T01:CDS
AGGATTATGTGCAGAAGTTG+TGG 0.537283 5:-87501115 MsG0580028845.01.T01:CDS
ATAACATAAGCAACATTGTA+GGG 0.540253 5:+87502294 None:intergenic
TAGCTTTCTTCCATGACAGC+CGG 0.543420 5:+87500241 None:intergenic
GCTTTGCTCCATTAACTGGT+TGG 0.550628 5:-87501310 MsG0580028845.01.T01:CDS
ATGAAAGTAGACAGTTATCC+CGG 0.551793 5:-87501380 MsG0580028845.01.T01:CDS
TCTTCAGACTGTGTCCTCCT+CGG 0.553884 5:+87500140 None:intergenic
GGATTATGTGCAGAAGTTGT+GGG 0.559994 5:-87501114 MsG0580028845.01.T01:CDS
AGCATTGAACTCGGAGTCAG+AGG 0.566836 5:-87502130 MsG0580028845.01.T01:CDS
GTTTGAATATAGGTCAGAGT+GGG 0.567512 5:+87502527 None:intergenic
CTTTATGCCTCCACTGCTAG+AGG 0.568348 5:-87502553 MsG0580028845.01.T01:CDS
TCATCATAGAACTCTTTGCA+TGG 0.568475 5:+87500280 None:intergenic
GCGCGGTGTTCGTTCGCTAA+GGG 0.570938 5:-87499202 MsG0580028845.01.T01:CDS
AAACTGGATCATCGATTCCA+AGG 0.572021 5:+87501280 None:intergenic
GCCTCACTGAATTTGACTTG+AGG 0.572438 5:-87502221 MsG0580028845.01.T01:CDS
GAATGATATTTGATAGAACA+AGG 0.573075 5:+87502425 None:intergenic
GAGTGGGTTTCCTCTAGCAG+TGG 0.573475 5:+87502543 None:intergenic
GACATTGTGCTCTTTGGCAA+TGG 0.573866 5:-87501410 MsG0580028845.01.T01:CDS
TATGGGGACCACCAGGAACT+GGG 0.576206 5:-87501589 MsG0580028845.01.T01:CDS
TGCAAAACTGCAGTATTGGT+CGG 0.579954 5:+87501497 None:intergenic
AAACTTATATGGGGACCACC+AGG 0.580351 5:-87501596 MsG0580028845.01.T01:CDS
TCCATTAAACTGTACACAGA+AGG 0.593634 5:-87500660 MsG0580028845.01.T01:CDS
CTATTTACTATGACAATGAG+AGG 0.600133 5:-87499012 MsG0580028845.01.T01:three_prime_UTR
AGAATGCAATGTTGAAGACC+TGG 0.601406 5:+87500558 None:intergenic
TGATGATACTATGACACTTG+AGG 0.602005 5:-87501135 MsG0580028845.01.T01:CDS
TGGGTTTCCTCTAGCAGTGG+AGG 0.606224 5:+87502546 None:intergenic
TTAGATGGTTCAAAGCAAGC+AGG 0.606292 5:+87500819 None:intergenic
ATATTCAAACTTATTAGGAG+TGG 0.606978 5:-87502514 MsG0580028845.01.T01:CDS
TATTTGGAAAGCATTGAACT+CGG 0.611582 5:-87502139 MsG0580028845.01.T01:CDS
AAAGTAATAGTAGTGATGCA+AGG 0.613380 5:-87503242 MsG0580028845.01.T01:CDS
AAAATCTGTATCAGAAACTG+AGG 0.625678 5:+87499871 None:intergenic
AAGAGTACAAAAGAATACAA+TGG 0.625861 5:-87502402 MsG0580028845.01.T01:CDS
AAAGAGAAATTTGGCCGAGG+AGG 0.626517 5:-87500154 MsG0580028845.01.T01:CDS
AGTTTGAATATAGGTCAGAG+TGG 0.634423 5:+87502526 None:intergenic
AGTTTCAAATTTATACACAA+CGG 0.638573 5:-87499130 MsG0580028845.01.T01:three_prime_UTR
ATGGAGCAAAGCACTGCATG+AGG 0.640690 5:+87501321 None:intergenic
TTGTTACCATGATGCCGATG+AGG 0.644161 5:-87499554 MsG0580028845.01.T01:CDS
GGTAAAGAGAAATTTGGCCG+AGG 0.644287 5:-87500157 MsG0580028845.01.T01:CDS
GCTAATGTCAAACTTATATG+GGG 0.644828 5:-87501605 MsG0580028845.01.T01:CDS
ATTGGTCGGAGCACATGTCA+AGG 0.644967 5:+87501511 None:intergenic
TCCGGCATTAGTCAAAAGCA+AGG 0.651579 5:-87500514 MsG0580028845.01.T01:intron
TCAAAATCTCTACAGGAACA+AGG 0.653124 5:-87503142 MsG0580028845.01.T01:intron
GCATTGAACTCGGAGTCAGA+GGG 0.653718 5:-87502129 MsG0580028845.01.T01:CDS
TCCTCAAGTCAAATTCAGTG+AGG 0.672268 5:+87502220 None:intergenic
TGGTAGCTGCAATGAAAGAG+CGG 0.674093 5:+87500578 None:intergenic
GATTATGTGCAGAAGTTGTG+GGG 0.683227 5:-87501113 MsG0580028845.01.T01:CDS
GTGATTCTTACATTGAGACA+AGG 0.684508 5:+87502072 None:intergenic
GATGGGCCATAAATCCCTAG+AGG 0.721917 5:-87501225 MsG0580028845.01.T01:CDS
AAGCTCGTGAATCAATTGCG+CGG 0.737596 5:-87499219 MsG0580028845.01.T01:CDS
GGCAGGCCAAGGAAACCTAG+AGG 0.743381 5:-87499252 MsG0580028845.01.T01:intron
GTTGTGGGGAGACATTGCCG+AGG 0.762702 5:-87501099 MsG0580028845.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAATTCTAAAAATATATTAT+TGG + Chr5:87499156-87499175 None:intergenic 10.0%
!!! TTATCTTATGATTTTTATAA+TGG - Chr5:87499186-87499205 MsG0580028845.01.T01:CDS 10.0%
!! AAAATACTTAGATGGAAATA+AGG + Chr5:87502856-87502875 None:intergenic 20.0%
!! AACAAATTAAGCCTAAAAAA+AGG + Chr5:87501718-87501737 None:intergenic 20.0%
!! AGAATGAATATTAAAGATGA+TGG + Chr5:87502169-87502188 None:intergenic 20.0%
!! AGTTTCAAATTTATACACAA+CGG - Chr5:87503058-87503077 MsG0580028845.01.T01:intron 20.0%
!! ATAATTCAAAACCTTAGAAA+GGG - Chr5:87502100-87502119 MsG0580028845.01.T01:CDS 20.0%
!! CTAAAAATATATTATTGGCA+GGG + Chr5:87499151-87499170 None:intergenic 20.0%
!! TACATATCATTTGTTTACAT+TGG - Chr5:87499485-87499504 MsG0580028845.01.T01:CDS 20.0%
!! TACTTCTACATAATTATTGA+AGG + Chr5:87500343-87500362 None:intergenic 20.0%
!! TATAATAAAAGTTTCCTTGA+TGG - Chr5:87501968-87501987 MsG0580028845.01.T01:intron 20.0%
!! TATGTTAAAATCAAACTTTG+AGG - Chr5:87503252-87503271 MsG0580028845.01.T01:CDS 20.0%
!! TCAGAAAAATAATCTTTCTT+GGG + Chr5:87500943-87500962 None:intergenic 20.0%
!! TCTAAAAATATATTATTGGC+AGG + Chr5:87499152-87499171 None:intergenic 20.0%
!!! AAAGATTATTTTTCTGAGAT+GGG - Chr5:87500946-87500965 MsG0580028845.01.T01:CDS 20.0%
!!! AGTTCGATTTTTTAAAACAT+TGG + Chr5:87499255-87499274 None:intergenic 20.0%
!!! ATATGATTTTTATTACCTAG+AGG + Chr5:87502777-87502796 None:intergenic 20.0%
!!! CTTGTTATTTGAAAATGATT+TGG - Chr5:87499118-87499137 MsG0580028845.01.T01:three_prime_UTR 20.0%
!!! GCATAGCTTTATATTTAAAA+AGG + Chr5:87500173-87500192 None:intergenic 20.0%
!!! TAATTTGCAACATTTTTTTG+TGG - Chr5:87502915-87502934 MsG0580028845.01.T01:intron 20.0%
!!! TCTTTTATTAACATAGCTAA+GGG - Chr5:87502010-87502029 MsG0580028845.01.T01:intron 20.0%
!!! TTAAGTTATACCATTTTTAC+TGG - Chr5:87499539-87499558 MsG0580028845.01.T01:CDS 20.0%
!!! TTCTTTTATTAACATAGCTA+AGG - Chr5:87502009-87502028 MsG0580028845.01.T01:intron 20.0%
! AATAACATAAGCAACATTGT+AGG + Chr5:87499898-87499917 None:intergenic 25.0%
! AGTTTGTAAAGAAGAGATTT+CGG - Chr5:87501163-87501182 MsG0580028845.01.T01:CDS 25.0%
! ATAACATAAGCAACATTGTA+GGG + Chr5:87499897-87499916 None:intergenic 25.0%
! ATATCTACTGTAAGATCTAA+TGG - Chr5:87502386-87502405 MsG0580028845.01.T01:CDS 25.0%
! ATATTCAAACTTATTAGGAG+TGG - Chr5:87499674-87499693 MsG0580028845.01.T01:intron 25.0%
! ATGCTAATGTCAAACTTATA+TGG - Chr5:87500581-87500600 MsG0580028845.01.T01:CDS 25.0%
! ATTAAGCCTAAAAAAAGGTA+AGG + Chr5:87501713-87501732 None:intergenic 25.0%
! CTCAGAAAAATAATCTTTCT+TGG + Chr5:87500944-87500963 None:intergenic 25.0%
! CTCCTAATAAGTTTGAATAT+AGG + Chr5:87499674-87499693 None:intergenic 25.0%
! GAATGATATTTGATAGAACA+AGG + Chr5:87499766-87499785 None:intergenic 25.0%
! GACATTTAACATTCAATACT+TGG - Chr5:87500304-87500323 MsG0580028845.01.T01:CDS 25.0%
! GACCTATATTCAAACTTATT+AGG - Chr5:87499669-87499688 MsG0580028845.01.T01:intron 25.0%
! GATAATTCAAAACCTTAGAA+AGG - Chr5:87502099-87502118 MsG0580028845.01.T01:CDS 25.0%
! TCTCATTGTCATAGTAAATA+GGG + Chr5:87503177-87503196 None:intergenic 25.0%
! TGAAAAGTAAGCATTTACAT+AGG + Chr5:87500250-87500269 None:intergenic 25.0%
! TGACAACAAATATTCGTATT+TGG - Chr5:87500033-87500052 MsG0580028845.01.T01:intron 25.0%
! TGCTAATGTCAAACTTATAT+GGG - Chr5:87500582-87500601 MsG0580028845.01.T01:CDS 25.0%
! TTCATTAACAAATTCCTCTA+GGG + Chr5:87500980-87500999 None:intergenic 25.0%
! TTCTAAATCAAAATCTCTAC+AGG - Chr5:87499039-87499058 MsG0580028845.01.T01:three_prime_UTR 25.0%
! TTTCATTAACAAATTCCTCT+AGG + Chr5:87500981-87501000 None:intergenic 25.0%
! TTTCCAAATAGAATCACTAT+TGG + Chr5:87502585-87502604 None:intergenic 25.0%
!! AAGAGTACAAAAGAATACAA+TGG - Chr5:87499786-87499805 MsG0580028845.01.T01:intron 25.0%
!! ATTTGATAGAACAAGGATTT+TGG + Chr5:87499759-87499778 None:intergenic 25.0%
!! GTTTTCATAACCAGTAAAAA+TGG + Chr5:87499552-87499571 None:intergenic 25.0%
!! TTTTAGATTGCTGATAATTG+TGG - Chr5:87501788-87501807 MsG0580028845.01.T01:intron 25.0%
!! TTTTGGATATTGTATTCTCA+TGG - Chr5:87499003-87499022 MsG0580028845.01.T01:intron 25.0%
!!! AAACTTTTTTAATGATGTCC+AGG + Chr5:87500091-87500110 None:intergenic 25.0%
!!! CAATGTTTTAAAAACCGAAT+AGG + Chr5:87499365-87499384 None:intergenic 25.0%
!!! CTATTCGGTTTTTAAAACAT+TGG - Chr5:87499363-87499382 MsG0580028845.01.T01:intron 25.0%
!!! GAAAGATTATTTTTCTGAGA+TGG - Chr5:87500945-87500964 MsG0580028845.01.T01:CDS 25.0%
!!! TGTAACATCTACTTTTGTTT+TGG - Chr5:87502198-87502217 MsG0580028845.01.T01:CDS 25.0%
AAAATCTGTATCAGAAACTG+AGG + Chr5:87502320-87502339 None:intergenic 30.0%
AAAGTAATAGTAGTGATGCA+AGG - Chr5:87498946-87498965 MsG0580028845.01.T01:three_prime_UTR 30.0%
AAGAAAAACAACCCTTTCTA+AGG + Chr5:87502114-87502133 None:intergenic 30.0%
AAGAAAAATATCTCCAAGAC+CGG + Chr5:87500830-87500849 None:intergenic 30.0%
AAGGTTGCATAGTTTAGTTA+TGG - Chr5:87500723-87500742 MsG0580028845.01.T01:CDS 30.0%
AATGCAAACCTAGTATTCTA+AGG + Chr5:87501413-87501432 None:intergenic 30.0%
AATTGAAAGTTTCATGACAC+TGG - Chr5:87501137-87501156 MsG0580028845.01.T01:CDS 30.0%
ACAAAGAAGAAAGTTAGCAT+TGG - Chr5:87502235-87502254 MsG0580028845.01.T01:CDS 30.0%
AGATACTGTCTTTGGATATT+AGG - Chr5:87502542-87502561 MsG0580028845.01.T01:CDS 30.0%
ATCATTTGTTTACATTGGTG+TGG - Chr5:87499490-87499509 MsG0580028845.01.T01:CDS 30.0%
ATTATTCTTCCTGAACTCAA+TGG - Chr5:87501441-87501460 MsG0580028845.01.T01:CDS 30.0%
ATTGCTGATAATTGTGGATT+TGG - Chr5:87501794-87501813 MsG0580028845.01.T01:intron 30.0%
CTATTTACTATGACAATGAG+AGG - Chr5:87503176-87503195 MsG0580028845.01.T01:CDS 30.0%
CTCTCATTGTCATAGTAAAT+AGG + Chr5:87503178-87503197 None:intergenic 30.0%
CTTCAACATTGCATTCTTAT+AGG - Chr5:87501636-87501655 MsG0580028845.01.T01:CDS 30.0%
GCAAGTGAAATGAAAGATTT+CGG + Chr5:87501240-87501259 None:intergenic 30.0%
GCTAATGTCAAACTTATATG+GGG - Chr5:87500583-87500602 MsG0580028845.01.T01:CDS 30.0%
GTTTGTAAAGAAGAGATTTC+GGG - Chr5:87501164-87501183 MsG0580028845.01.T01:CDS 30.0%
TAAAACAAAGCAATTTCCCA+TGG + Chr5:87500274-87500293 None:intergenic 30.0%
TAGCCAATAGTGATTCTATT+TGG - Chr5:87502579-87502598 MsG0580028845.01.T01:CDS 30.0%
TAGTAAATAGGGCAAAACTA+TGG + Chr5:87503166-87503185 None:intergenic 30.0%
TGAAAAAATTTCTGATGCTC+CGG - Chr5:87501928-87501947 MsG0580028845.01.T01:intron 30.0%
TGTGAGAAATCAGAAATTGA+TGG - Chr5:87502746-87502765 MsG0580028845.01.T01:intron 30.0%
TGTTGGAGAATTAAAAGTCT+CGG + Chr5:87499601-87499620 None:intergenic 30.0%
TTATTCTTCCTGAACTCAAT+GGG - Chr5:87501442-87501461 MsG0580028845.01.T01:CDS 30.0%
TTCACTGTGAGAGTTTAAAA+GGG + Chr5:87499086-87499105 None:intergenic 30.0%
TTCAGGAAGAATAATTGAAC+TGG + Chr5:87501436-87501455 None:intergenic 30.0%
TTTCACTGTGAGAGTTTAAA+AGG + Chr5:87499087-87499106 None:intergenic 30.0%
TTTGAGAGATTGGTATTGTT+AGG - Chr5:87501827-87501846 MsG0580028845.01.T01:intron 30.0%
TTTGCATGGAAAAAAGCTTA+TGG + Chr5:87501897-87501916 None:intergenic 30.0%
! AAGAAGTATGTTTGAGAGAT+TGG - Chr5:87501817-87501836 MsG0580028845.01.T01:intron 30.0%
! AAGGAGTTTTTGTAATCTGT+TGG + Chr5:87499618-87499637 None:intergenic 30.0%
! CCATCTAAGTATTTTGCTTT+GGG - Chr5:87502861-87502880 MsG0580028845.01.T01:intron 30.0%
! TCAAAAACTTGAGCATTGTA+TGG + Chr5:87502271-87502290 None:intergenic 30.0%
! TCAAACATAATTCCTCCTTT+TGG - Chr5:87503128-87503147 MsG0580028845.01.T01:intron 30.0%
! TCACCAGAAAAATCATCTTT+TGG + Chr5:87499924-87499943 None:intergenic 30.0%
! TCCATCTAAGTATTTTGCTT+TGG - Chr5:87502860-87502879 MsG0580028845.01.T01:intron 30.0%
!! AAATGCTTACTTTTCATCCA+TGG - Chr5:87500254-87500273 MsG0580028845.01.T01:CDS 30.0%
!! AATGCTTACTTTTCATCCAT+GGG - Chr5:87500255-87500274 MsG0580028845.01.T01:CDS 30.0%
!! ATTAGCTCTGTCTATTTGAA+AGG + Chr5:87502430-87502449 None:intergenic 30.0%
!! TATTTGGAAAGCATTGAACT+CGG - Chr5:87500049-87500068 MsG0580028845.01.T01:intron 30.0%
!! TATTTGTTGTCATGTTCATC+AGG + Chr5:87500025-87500044 None:intergenic 30.0%
!!! CTTGATCCTTACCTTTTTTT+AGG - Chr5:87501704-87501723 MsG0580028845.01.T01:CDS 30.0%
AAGCAAACATTTCTCCATCA+AGG + Chr5:87501985-87502004 None:intergenic 35.0%
ACTGTAAGATCTAATGGAAG+TGG - Chr5:87502392-87502411 MsG0580028845.01.T01:CDS 35.0%
AGAAAAATATCTCCAAGACC+GGG + Chr5:87500829-87500848 None:intergenic 35.0%
AGCTAATGTTGCAATGACAA+GGG - Chr5:87502443-87502462 MsG0580028845.01.T01:CDS 35.0%
AGGTAAACTGCATACATCTT+TGG + Chr5:87500005-87500024 None:intergenic 35.0%
AGTTTGAATATAGGTCAGAG+TGG + Chr5:87499665-87499684 None:intergenic 35.0%
ATCACAAAAACACCAAAAGG+AGG + Chr5:87503143-87503162 None:intergenic 35.0%
ATGAAAGTAGACAGTTATCC+CGG - Chr5:87500808-87500827 MsG0580028845.01.T01:CDS 35.0%
ATTCAAGTCATCTACTCTCT+TGG + Chr5:87499862-87499881 None:intergenic 35.0%
CATGGAAAAAAGCTTATGGA+TGG + Chr5:87501893-87501912 None:intergenic 35.0%
CCATCTATTTCAGAGTTAGA+TGG + Chr5:87501387-87501406 None:intergenic 35.0%
CCCAAAGCAAAATACTTAGA+TGG + Chr5:87502864-87502883 None:intergenic 35.0%
CTGTAAGATCTAATGGAAGT+GGG - Chr5:87502393-87502412 MsG0580028845.01.T01:CDS 35.0%
GATGGTTTCCTTAGAATACT+AGG - Chr5:87501402-87501421 MsG0580028845.01.T01:CDS 35.0%
GCTAAGGGTAAAGAGAAATT+TGG - Chr5:87502025-87502044 MsG0580028845.01.T01:intron 35.0%
GTGATTCTTACATTGAGACA+AGG + Chr5:87500119-87500138 None:intergenic 35.0%
GTTGGAGAATTAAAAGTCTC+GGG + Chr5:87499600-87499619 None:intergenic 35.0%
GTTTGAATATAGGTCAGAGT+GGG + Chr5:87499664-87499683 None:intergenic 35.0%
TATGAAAACTGTTCTATCGC+AGG - Chr5:87499563-87499582 MsG0580028845.01.T01:CDS 35.0%
TCAAAATCTCTACAGGAACA+AGG - Chr5:87499046-87499065 MsG0580028845.01.T01:three_prime_UTR 35.0%
TCATCATAGAACTCTTTGCA+TGG + Chr5:87501911-87501930 None:intergenic 35.0%
TCCATTAAACTGTACACAGA+AGG - Chr5:87501528-87501547 MsG0580028845.01.T01:CDS 35.0%
TCCTTCTGTGTACAGTTTAA+TGG + Chr5:87501532-87501551 None:intergenic 35.0%
TCTTGGGATCATTAAGAAAC+TGG + Chr5:87500927-87500946 None:intergenic 35.0%
TGATGATACTATGACACTTG+AGG - Chr5:87501053-87501072 MsG0580028845.01.T01:CDS 35.0%
TGGATCACAAAAACACCAAA+AGG + Chr5:87503146-87503165 None:intergenic 35.0%
TGTGTACAGTTTAATGGAAC+TGG + Chr5:87501526-87501545 None:intergenic 35.0%
TTCAAGTCATCTACTCTCTT+GGG + Chr5:87499861-87499880 None:intergenic 35.0%
! AAATTGATGGTTCTTCCTCT+AGG - Chr5:87502759-87502778 MsG0580028845.01.T01:intron 35.0%
! AGTTTAAAGCACTTGAACCA+TGG - Chr5:87499314-87499333 MsG0580028845.01.T01:intron 35.0%
! ATCAAGAGTTTTCTTGAACC+TGG + Chr5:87501328-87501347 None:intergenic 35.0%
! ATGTCAGTTTTCAACCAACT+TGG + Chr5:87502508-87502527 None:intergenic 35.0%
! CAAATTCCTCTAGGGATTTA+TGG + Chr5:87500972-87500991 None:intergenic 35.0%
! GCTCCAAAAGATGATTTTTC+TGG - Chr5:87499918-87499937 MsG0580028845.01.T01:CDS 35.0%
! TTGAGCTTGTTTACTAGCAT+AGG + Chr5:87500217-87500236 None:intergenic 35.0%
!! CCATCTAACTCTGAAATAGA+TGG - Chr5:87501384-87501403 MsG0580028845.01.T01:CDS 35.0%
!!! TTGTTTTGGCAGAGTTTATG+AGG - Chr5:87502212-87502231 MsG0580028845.01.T01:CDS 35.0%
AACCGAATAGGACATCAATC+CGG + Chr5:87499353-87499372 None:intergenic 40.0%
AGAATGCAATGTTGAAGACC+TGG + Chr5:87501633-87501652 None:intergenic 40.0%
AGCCAATTTCTTGTCCTCAT+CGG + Chr5:87502651-87502670 None:intergenic 40.0%
AGCTGCAAAGTTTGCATGTT+TGG - Chr5:87500451-87500470 MsG0580028845.01.T01:intron 40.0%
AGGATTATGTGCAGAAGTTG+TGG - Chr5:87501073-87501092 MsG0580028845.01.T01:CDS 40.0%
AGGTGATGAGAAACAACTTC+CGG - Chr5:87501656-87501675 MsG0580028845.01.T01:CDS 40.0%
ATGTTGTGCAGATTCCAAGT+TGG - Chr5:87502491-87502510 MsG0580028845.01.T01:CDS 40.0%
CACTTGCAAAACTGCAGTAT+TGG + Chr5:87500698-87500717 None:intergenic 40.0%
CATTGCCGAGGAATATGAAT+CGG - Chr5:87501101-87501120 MsG0580028845.01.T01:CDS 40.0%
CTCATCCGATTCATATTCCT+CGG + Chr5:87501109-87501128 None:intergenic 40.0%
CTTGAATTGCTCAGGTCTAT+TGG - Chr5:87501285-87501304 MsG0580028845.01.T01:CDS 40.0%
GAATATCCTTGTATCAAGCC+AGG - Chr5:87501307-87501326 MsG0580028845.01.T01:CDS 40.0%
GAGCATGATACGTATGGATT+AGG - Chr5:87500754-87500773 MsG0580028845.01.T01:CDS 40.0%
GAGCTAATGTTGCAATGACA+AGG - Chr5:87502442-87502461 MsG0580028845.01.T01:CDS 40.0%
GATTATGTGCAGAAGTTGTG+GGG - Chr5:87501075-87501094 MsG0580028845.01.T01:CDS 40.0%
GGAAAATATGAACCAGAAGC+TGG - Chr5:87499807-87499826 MsG0580028845.01.T01:intron 40.0%
GGATTATGTGCAGAAGTTGT+GGG - Chr5:87501074-87501093 MsG0580028845.01.T01:CDS 40.0%
GTTAGTGTTCGTTCTGTTGA+CGG - Chr5:87502343-87502362 MsG0580028845.01.T01:CDS 40.0%
TCACTTGAGCATGATACGTA+TGG - Chr5:87500748-87500767 MsG0580028845.01.T01:CDS 40.0%
TCCTCAAGTCAAATTCAGTG+AGG + Chr5:87499971-87499990 None:intergenic 40.0%
TCTAATGGAAGTGGGAAAGT+AGG - Chr5:87502401-87502420 MsG0580028845.01.T01:CDS 40.0%
TGATTCACGAGCTTCATACT+TGG + Chr5:87502963-87502982 None:intergenic 40.0%
TGGAGATCTCATTGCTTTCA+CGG - Chr5:87499827-87499846 MsG0580028845.01.T01:CDS 40.0%
TTAGATGGTTCAAAGCAAGC+AGG + Chr5:87501372-87501391 None:intergenic 40.0%
TTAGGTGACATTGTGCTCTT+TGG - Chr5:87500772-87500791 MsG0580028845.01.T01:CDS 40.0%
TTGTGTGCAGATACTGTCTT+TGG - Chr5:87502534-87502553 MsG0580028845.01.T01:CDS 40.0%
TTTCGGCAAGTGTGTGTATA+AGG + Chr5:87501223-87501242 None:intergenic 40.0%
! CAATACTGCAGTTTTGCAAG+TGG - Chr5:87500696-87500715 MsG0580028845.01.T01:CDS 40.0%
! GAATGCAGCTCTTGGATTTT+TGG - Chr5:87498986-87499005 MsG0580028845.01.T01:intron 40.0%
!! AAACTGGATCATCGATTCCA+AGG + Chr5:87500911-87500930 None:intergenic 40.0%
!! ACCTTGCTTTTGACTAATGC+CGG + Chr5:87501678-87501697 None:intergenic 40.0%
!! TGCAAAACTGCAGTATTGGT+CGG + Chr5:87500694-87500713 None:intergenic 40.0%
AAACTTATATGGGGACCACC+AGG - Chr5:87500592-87500611 MsG0580028845.01.T01:CDS 45.0%
AAAGAGAAATTTGGCCGAGG+AGG - Chr5:87502034-87502053 MsG0580028845.01.T01:intron 45.0%
AAGCTCGTGAATCAATTGCG+CGG - Chr5:87502969-87502988 MsG0580028845.01.T01:intron 45.0%
AGCTTCATACTTGGTCCTCT+AGG + Chr5:87502954-87502973 None:intergenic 45.0%
ATCAATCCGGCAAGAGATAC+GGG + Chr5:87499340-87499359 None:intergenic 45.0%
ATGTTGCAATGACAAGGGCT+AGG - Chr5:87502448-87502467 MsG0580028845.01.T01:CDS 45.0%
CAGTGCTTTGCTCCATTAAC+TGG - Chr5:87500874-87500893 MsG0580028845.01.T01:CDS 45.0%
CATCAATCCGGCAAGAGATA+CGG + Chr5:87499341-87499360 None:intergenic 45.0%
GACATTGTGCTCTTTGGCAA+TGG - Chr5:87500778-87500797 MsG0580028845.01.T01:CDS 45.0%
GCTTTGCTCCATTAACTGGT+TGG - Chr5:87500878-87500897 MsG0580028845.01.T01:CDS 45.0%
GGTAAAGAGAAATTTGGCCG+AGG - Chr5:87502031-87502050 MsG0580028845.01.T01:intron 45.0%
GTCTGCTTCCAACCAGTTAA+TGG + Chr5:87500889-87500908 None:intergenic 45.0%
TAGCTTTCTTCCATGACAGC+CGG + Chr5:87501950-87501969 None:intergenic 45.0%
TCCGGCATTAGTCAAAAGCA+AGG - Chr5:87501674-87501693 MsG0580028845.01.T01:CDS 45.0%
TGAACTCTCCCATTGAGTTC+AGG + Chr5:87501453-87501472 None:intergenic 45.0%
TGCCGATGAGGACAAGAAAT+TGG - Chr5:87502646-87502665 MsG0580028845.01.T01:intron 45.0%
TGCCGGATTGATGTCCTATT+CGG - Chr5:87499348-87499367 MsG0580028845.01.T01:intron 45.0%
TGGTAGCTGCAATGAAAGAG+CGG + Chr5:87501613-87501632 None:intergenic 45.0%
TTCGAGCTCTTGAATTGCTC+AGG - Chr5:87501277-87501296 MsG0580028845.01.T01:CDS 45.0%
TTGTTACCATGATGCCGATG+AGG - Chr5:87502634-87502653 MsG0580028845.01.T01:intron 45.0%
! CAGTTTTGCAAGTGGCAACA+AGG - Chr5:87500704-87500723 MsG0580028845.01.T01:CDS 45.0%
! CGTTCTGTTGACGGTTTTCA+AGG - Chr5:87502352-87502371 MsG0580028845.01.T01:CDS 45.0%
! CTTGAACCTGGCTTGATACA+AGG + Chr5:87501316-87501335 None:intergenic 45.0%
!! GCCTCACTGAATTTGACTTG+AGG - Chr5:87499967-87499986 MsG0580028845.01.T01:CDS 45.0%
!! TCTGTTGACGGTTTTCAAGG+TGG - Chr5:87502355-87502374 MsG0580028845.01.T01:CDS 45.0%
!! TTTGTTTTCCCAGTTCCTGG+TGG + Chr5:87500610-87500629 None:intergenic 45.0%
!!! GTCTTTGTTTTCCCAGTTCC+TGG + Chr5:87500613-87500632 None:intergenic 45.0%
AACTGGTTGGAAGCAGACCT+TGG - Chr5:87500891-87500910 MsG0580028845.01.T01:CDS 50.0%
ATTGGTCGGAGCACATGTCA+AGG + Chr5:87500680-87500699 None:intergenic 50.0%
CTTGGTCCTCTAGGTTTCCT+TGG + Chr5:87502945-87502964 None:intergenic 50.0%
CTTTATGCCTCCACTGCTAG+AGG - Chr5:87499635-87499654 MsG0580028845.01.T01:intron 50.0%
GATGACGAGAATGCAGCTCT+TGG - Chr5:87498978-87498997 MsG0580028845.01.T01:intron 50.0%
GATGGGCCATAAATCCCTAG+AGG - Chr5:87500963-87500982 MsG0580028845.01.T01:CDS 50.0%
GCAATGAGATCTCCAGCTTC+TGG + Chr5:87499822-87499841 None:intergenic 50.0%
GCATTGAACTCGGAGTCAGA+GGG - Chr5:87500059-87500078 MsG0580028845.01.T01:intron 50.0%
GCTCTTTCATTGCAGCTACC+AGG - Chr5:87501612-87501631 MsG0580028845.01.T01:CDS 50.0%
GTAGACAGTTATCCCGGTCT+TGG - Chr5:87500814-87500833 MsG0580028845.01.T01:CDS 50.0%
TCTTCAGACTGTGTCCTCCT+CGG + Chr5:87502051-87502070 None:intergenic 50.0%
TCTTGTCCTCATCGGCATCA+TGG + Chr5:87502643-87502662 None:intergenic 50.0%
! AGCATTGAACTCGGAGTCAG+AGG - Chr5:87500058-87500077 MsG0580028845.01.T01:intron 50.0%
! CTCTAGCAGTGGAGGCATAA+AGG + Chr5:87499637-87499656 None:intergenic 50.0%
!! ATGGAGCAAAGCACTGCATG+AGG + Chr5:87500870-87500889 None:intergenic 50.0%
ATATGGGGACCACCAGGAAC+TGG - Chr5:87500598-87500617 MsG0580028845.01.T01:CDS 55.0%
TATGGGGACCACCAGGAACT+GGG - Chr5:87500599-87500618 MsG0580028845.01.T01:CDS 55.0%
TGGGTTTCCTCTAGCAGTGG+AGG + Chr5:87499645-87499664 None:intergenic 55.0%
TTCTGATGCTCCGGCTGTCA+TGG - Chr5:87501937-87501956 MsG0580028845.01.T01:intron 55.0%
! GAGTGGGTTTCCTCTAGCAG+TGG + Chr5:87499648-87499667 None:intergenic 55.0%
CCATGGCCCGTATCTCTTGC+CGG - Chr5:87499331-87499350 MsG0580028845.01.T01:intron 60.0%
GCGCGGTGTTCGTTCGCTAA+GGG - Chr5:87502986-87503005 MsG0580028845.01.T01:intron 60.0%
GTTGTGGGGAGACATTGCCG+AGG - Chr5:87501089-87501108 MsG0580028845.01.T01:CDS 60.0%
TGCGCGGTGTTCGTTCGCTA+AGG - Chr5:87502985-87503004 MsG0580028845.01.T01:intron 60.0%
CCGGCAAGAGATACGGGCCA+TGG + Chr5:87499334-87499353 None:intergenic 65.0%
GGAGTCAGAGGGCGAACACC+TGG - Chr5:87500070-87500089 MsG0580028845.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 87498939 87503271 87498939 ID=MsG0580028845.01;Name=MsG0580028845.01
Chr5 mRNA 87498939 87503271 87498939 ID=MsG0580028845.01.T01;Parent=MsG0580028845.01;Name=MsG0580028845.01.T01;_AED=0.10;_eAED=0.10;_QI=0|0.57|0.37|1|0.85|0.75|8|215|904
Chr5 exon 87498939 87498983 87498939 ID=MsG0580028845.01.T01:exon:23230;Parent=MsG0580028845.01.T01
Chr5 exon 87499009 87499269 87499009 ID=MsG0580028845.01.T01:exon:23229;Parent=MsG0580028845.01.T01
Chr5 exon 87499430 87499628 87499430 ID=MsG0580028845.01.T01:exon:23228;Parent=MsG0580028845.01.T01
Chr5 exon 87499816 87499986 87499816 ID=MsG0580028845.01.T01:exon:23227;Parent=MsG0580028845.01.T01
Chr5 exon 87500089 87500416 87500089 ID=MsG0580028845.01.T01:exon:23226;Parent=MsG0580028845.01.T01
Chr5 exon 87500515 87501768 87500515 ID=MsG0580028845.01.T01:exon:23225;Parent=MsG0580028845.01.T01
Chr5 exon 87502083 87502625 87502083 ID=MsG0580028845.01.T01:exon:23224;Parent=MsG0580028845.01.T01
Chr5 exon 87503143 87503271 87503143 ID=MsG0580028845.01.T01:exon:23223;Parent=MsG0580028845.01.T01
Chr5 CDS 87503143 87503271 87503143 ID=MsG0580028845.01.T01:cds;Parent=MsG0580028845.01.T01
Chr5 CDS 87502083 87502625 87502083 ID=MsG0580028845.01.T01:cds;Parent=MsG0580028845.01.T01
Chr5 CDS 87500515 87501768 87500515 ID=MsG0580028845.01.T01:cds;Parent=MsG0580028845.01.T01
Chr5 CDS 87500089 87500416 87500089 ID=MsG0580028845.01.T01:cds;Parent=MsG0580028845.01.T01
Chr5 CDS 87499816 87499986 87499816 ID=MsG0580028845.01.T01:cds;Parent=MsG0580028845.01.T01
Chr5 CDS 87499430 87499628 87499430 ID=MsG0580028845.01.T01:cds;Parent=MsG0580028845.01.T01
Chr5 CDS 87499179 87499269 87499179 ID=MsG0580028845.01.T01:cds;Parent=MsG0580028845.01.T01
Chr5 three_prime_UTR 87499009 87499178 87499009 ID=MsG0580028845.01.T01:three_prime_utr;Parent=MsG0580028845.01.T01
Chr5 three_prime_UTR 87498939 87498983 87498939 ID=MsG0580028845.01.T01:three_prime_utr;Parent=MsG0580028845.01.T01
Gene Sequence

>MsG0580028845.01.T01

ATGTGGAAAAGTAATAGTAGTGATGCAAGGAATGATGATGATGACGAGAATGCAGCTCTTGGATTTTTGGATATTGTATTCTCATGGTCTCTCAAAGAAGTTCTAAATCAAAATCTCTACAGGAACAAGGTGAAGAAAATTCCCGAGACTTTTAATTCTCCAACAGATTACAAAAACTCCTTTATGCCTCCACTGCTAGAGGAAACCCACTCTGACCTATATTCAAACTTATTAGGAGTGGCTCATGCTCATTTTTGTGAAGTCACGAAAGTTGAAAGAGACAGCAAGCAATTCAAGCTTCCAAAATCCTTGTTCTATCAAATATCATTCAAGAGTACAAAAGAATACAATGGAAAATATGAACCAGAAGCTGGAGATCTCATTGCTTTCACGGATATTATGCCCAAGAGAGTAGATGACTTGAATACACAAAAATGTCCCTACAATGTTGCTTATGTTATTGCTCCAAAAGATGATTTTTCTGGTGAACTCTCAATTCTGTCATCGAAATGCCTCACTGAATTTGACTTGAGGAAAAACGATGCACCAAAGATGTATGCAGTTTACCTGATGAACATGACAACAAATATTCGTATTTGGAAAGCATTGAACTCGGAGTCAGAGGGCGAACACCTGGACATCATTAAAAAAGTTTTGCGACCTTGTCTCAATATTAGAGAAAGCTGCAAAGTTTGCATGTTTGGATCAAATAGTCAGTCTTCTTTCGTTAAAGATGTAATTCGTTCTCAAGATCTGAATGAATCACAACAAGAAGCAGTTTCAAGCTGTGTTAGTATGATGAATTGTTCTCATGCTAATGTCAAACTTATATGGGGACCACCAGGAACTGGGAAAACAAAGACTGTTGCATGCTTGCTCTTTTCTCTACTCAAGTTGCAAACAAGAACCTTGACATGTGCTCCGACCAATACTGCAGTTTTGCAAGTGGCAACAAGGTTGCATAGTTTAGTTATGGATTCACTTGAGCATGATACGTATGGATTAGGTGACATTGTGCTCTTTGGCAATGGTAAGAGAATGAAAGTAGACAGTTATCCCGGTCTTGGAGATATTTTTCTTGATTATCGCGTGAAGAACCTCATGCAGTGCTTTGCTCCATTAACTGGTTGGAAGCAGACCTTGGAATCGATGATCCAGTTTCTTAATGATCCCAAGAAAGATTATTTTTCTGAGATGGGCCATAAATCCCTAGAGGAATTTGTTAATGAAAAAAATAGTCATGTTTTATCTGCATATCGTGCGTACAAGAGAATTAGTAAAGATGATGATACTATGACACTTGAGGATTATGTGCAGAAGTTGTGGGGAGACATTGCCGAGGAATATGAATCGGATGAGAATGATAAAATTGAAAGTTTCATGACACTGGAGAAGTTTGTAAAGAAGAGATTTCGGGAACTAAGTGAGAAGCTCAAGTTCTTGATGCAAACCTTATACACACACTTGCCGAAATCTTTCATTTCACTTGCAACAGTGAAAAACATGTTTCGAGCTCTTGAATTGCTCAGGTCTATTGGAATATCCTTGTATCAAGCCAGGTTCAAGAAAACTCTTGATGAATGTGAAAAAGAAATTATTCCTGCTTGCTTTGAACCATCTAACTCTGAAATAGATGGTTTCCTTAGAATACTAGGTTTGCATTCCAGTTCAATTATTCTTCCTGAACTCAATGGGAGAGTTCACATTGAAAAGTTTTGCTTGTCGAACGCACGTTTAATTTTGTGTACAGTTTCCAGTTCCATTAAACTGTACACAGAAGGAATGAGTCAAGTGAAATTTTTAGTAATTGATGAAGCTGCACAGTTGAAAGAATGTGAATCCGCTCTTTCATTGCAGCTACCAGGTCTTCAACATTGCATTCTTATAGGTGATGAGAAACAACTTCCGGCATTAGTCAAAAGCAAGATTGCTGATAATTGTGGATTTGGAAGAAGTATGTTTGAGAGATTGGTATTGTTAGGATTCAAGAAGCATATGCTTAATGTTCAGTATAGAATGCATCCATCCATAAGCTTTTTTCCATGCAAAGAGTTCTATGATGAAAAAATTTCTGATGCTCCGGCTGTCATGGAAGAAAGCTATAATAAAAGTTTCCTTGATGGAGAAATGTTTGCTTCTTATTCTTTTATTAACATAGCTAAGGGTAAAGAGAAATTTGGCCGAGGAGGACACAGTCTGAAGAATATTGTTGAAGTTGCTGTTATTTCTGAGATAATTCAAAACCTTAGAAAGGAGTTTATGAGGACAAAGAAGAAAGTTAGCATTGGAATAATTTCACCATACAATGCTCAAGTTTTTGAAATTCAAGAGAAAGTTAAGCAGTACACCTCAGTTTCTGATACAGATTTTTCTGTTAGTGTTCGTTCTGTTGACGGTTTTCAAGGTGGCGAAGATAATATCTACTCCAATAGTGATTCTATTTGGAAAAAGTTAATTGTTGATGCTAAGAAAAGAGATTGTTACCATGATGCCGATGAGGACAAGAAATTGGCTCGAGTTATTGATGATGTCTTGTTTGAGCTTGAGCTACTTGAAGACTCTGAGTCAAAGTTTAAGAAACTCAGTCTATGTGAGAAATCAGAAATTGATGGTTCTTCCTCTAGGCCAAGGAAACCTAGAGGACCAAGTATGAAGCTCGTGAATCAATTGCGCGGTGTTCGTTCGCTAAGGGAAGACATTGAATCACTGCTGTGA
Protein sequence

>MsG0580028845.01.T01

MWKSNSSDARNDDDDENAALGFLDIVFSWSLKEVLNQNLYRNKVKKIPETFNSPTDYKNSFMPPLLEETHSDLYSNLLGVAHAHFCEVTKVERDSKQFKLPKSLFYQISFKSTKEYNGKYEPEAGDLIAFTDIMPKRVDDLNTQKCPYNVAYVIAPKDDFSGELSILSSKCLTEFDLRKNDAPKMYAVYLMNMTTNIRIWKALNSESEGEHLDIIKKVLRPCLNIRESCKVCMFGSNSQSSFVKDVIRSQDLNESQQEAVSSCVSMMNCSHANVKLIWGPPGTGKTKTVACLLFSLLKLQTRTLTCAPTNTAVLQVATRLHSLVMDSLEHDTYGLGDIVLFGNGKRMKVDSYPGLGDIFLDYRVKNLMQCFAPLTGWKQTLESMIQFLNDPKKDYFSEMGHKSLEEFVNEKNSHVLSAYRAYKRISKDDDTMTLEDYVQKLWGDIAEEYESDENDKIESFMTLEKFVKKRFRELSEKLKFLMQTLYTHLPKSFISLATVKNMFRALELLRSIGISLYQARFKKTLDECEKEIIPACFEPSNSEIDGFLRILGLHSSSIILPELNGRVHIEKFCLSNARLILCTVSSSIKLYTEGMSQVKFLVIDEAAQLKECESALSLQLPGLQHCILIGDEKQLPALVKSKIADNCGFGRSMFERLVLLGFKKHMLNVQYRMHPSISFFPCKEFYDEKISDAPAVMEESYNKSFLDGEMFASYSFINIAKGKEKFGRGGHSLKNIVEVAVISEIIQNLRKEFMRTKKKVSIGIISPYNAQVFEIQEKVKQYTSVSDTDFSVSVRSVDGFQGGEDNIYSNSDSIWKKLIVDAKKRDCYHDADEDKKLARVIDDVLFELELLEDSESKFKKLSLCEKSEIDGSSSRPRKPRGPSMKLVNQLRGVRSLREDIESLL*