AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028855.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028855.01.T01 MTR_5g076640 93.429 487 29 1 4 487 2 488 0.0 928
MsG0580028855.01.T01 MTR_1g077040 27.018 285 176 10 51 314 33 306 4.17e-14 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028855.01.T01 AT5G17240 56.057 487 204 6 4 486 2 482 0.0 555
MsG0580028855.01.T01 AT5G17240 56.250 416 173 5 75 486 1 411 2.81e-166 476

Find 101 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTGGTTGTAATGCAAATA+AGG 0.208773 5:+87662520 MsG0580028855.01.T01:three_prime_UTR
CTAGTCATTAAAGCAGATTT+TGG 0.219025 5:-87658749 None:intergenic
GTCGGACATCTTGCATATTC+TGG 0.229958 5:+87662114 MsG0580028855.01.T01:CDS
GAAATGATGTTATGATTAAT+TGG 0.256359 5:+87662503 MsG0580028855.01.T01:exon
CTATGGAACATACACAAATT+TGG 0.272520 5:+87661897 MsG0580028855.01.T01:CDS
TATTTACTGCAGAGTGAAAT+AGG 0.275653 5:+87662569 MsG0580028855.01.T01:three_prime_UTR
AGCTTCTTTCCATTCTGATT+TGG 0.281371 5:-87660583 None:intergenic
TAACATTTAAGGCTTGGGTC+TGG 0.317268 5:+87660646 MsG0580028855.01.T01:CDS
CTCTCGTCTCTCCTCTGTTC+AGG 0.323533 5:+87658823 MsG0580028855.01.T01:CDS
CACTTCTACTTCATGGTCTA+AGG 0.325752 5:+87661999 MsG0580028855.01.T01:CDS
CATGACTATAATTTCATTGT+TGG 0.340261 5:-87662151 None:intergenic
AACATTTAAGGCTTGGGTCT+GGG 0.343281 5:+87660647 MsG0580028855.01.T01:CDS
TTGTTAAACTTATGTCTTCC+AGG 0.343599 5:+87662292 MsG0580028855.01.T01:CDS
TTGGAGCTTCTTGAACACTA+TGG 0.346357 5:+87661916 MsG0580028855.01.T01:CDS
AATCGTAACTTTGCGGCAAA+TGG 0.353382 5:-87660346 None:intergenic
GGGCAACCCCTCATAATAAA+AGG 0.361144 5:+87662085 MsG0580028855.01.T01:CDS
CTATGTACACTTCTACTTCA+TGG 0.363522 5:+87661992 MsG0580028855.01.T01:CDS
GGTGGAAATTAGCCGTCTTA+TGG 0.364443 5:+87662412 MsG0580028855.01.T01:CDS
CAACAAGAACTCTCTTATAC+TGG 0.372525 5:-87662440 None:intergenic
TGAAGTTTATACCTTCTTAG+AGG 0.378526 5:+87662317 MsG0580028855.01.T01:CDS
GACCAATCTCTTTCCTCTCT+TGG 0.388506 5:+87658462 MsG0580028855.01.T01:CDS
TACGATTTGCTAGCCATGTT+TGG 0.389728 5:+87660362 MsG0580028855.01.T01:CDS
TAATTAAACAAGTCACCAAC+AGG 0.396024 5:-87661383 None:intergenic
GCCTTTCTTGTAATTTGTCC+TGG 0.398351 5:-87661567 None:intergenic
GACTAGTGAGAGTGTTACTA+TGG 0.399843 5:+87658766 MsG0580028855.01.T01:CDS
CTCTTATTGCAATGGAATGT+TGG 0.404837 5:+87662470 MsG0580028855.01.T01:CDS
GAAAGAAGCTCATGCCTTGA+TGG 0.405482 5:+87660596 MsG0580028855.01.T01:CDS
GCACCTGGAGAGGACCTATC+TGG 0.423204 5:+87661410 MsG0580028855.01.T01:CDS
TTAGAAGATGGAACAAGATC+AGG 0.432327 5:+87658365 None:intergenic
TTCTAGCTGCGTTACGATTG+TGG 0.436159 5:+87662064 MsG0580028855.01.T01:CDS
AGAATGTTGCAGTAGAGGTT+TGG 0.444175 5:+87658682 MsG0580028855.01.T01:intron
GAATGTTGCAGTAGAGGTTT+GGG 0.448690 5:+87658683 MsG0580028855.01.T01:intron
ATGAAATTATAGTCATGAAA+TGG 0.451259 5:+87662157 MsG0580028855.01.T01:CDS
CTTGTTATACGAAGTTGGTA+AGG 0.457725 5:+87660292 MsG0580028855.01.T01:CDS
TCTAGCTGCGTTACGATTGT+GGG 0.460277 5:+87662065 MsG0580028855.01.T01:CDS
GTTTGCTTGTTATACGAAGT+TGG 0.462021 5:+87660287 MsG0580028855.01.T01:CDS
CTACCTTTCCTCACTCTGGC+GGG 0.467292 5:+87658502 MsG0580028855.01.T01:CDS
GTGCTGTGAGAGATCTTAAG+AGG 0.468743 5:+87658705 MsG0580028855.01.T01:CDS
CACCAGGTTCTATTATGCTA+TGG 0.472726 5:+87661880 MsG0580028855.01.T01:intron
TACCTTACTCTTGAATGCAT+TGG 0.477820 5:+87662236 MsG0580028855.01.T01:CDS
CTCCAATGCATTCAAGAGTA+AGG 0.486004 5:-87662238 None:intergenic
TTGGGTCTGGGCTGCTGCAA+CGG 0.491411 5:+87660659 MsG0580028855.01.T01:CDS
AACTTTGCGGCAAATGGACG+AGG 0.497147 5:-87660340 None:intergenic
TGCGGCAAATGGACGAGGTA+AGG 0.498856 5:-87660335 None:intergenic
AAATGGAGACAAGAATGAAA+TGG 0.501334 5:+87661460 MsG0580028855.01.T01:CDS
GACCAAGAGAGGAAAGAGAT+TGG 0.509699 5:-87658464 None:intergenic
TTGGTAAGGGAAAGACTTCA+AGG 0.512774 5:+87660306 MsG0580028855.01.T01:CDS
GTTTCTACCTTTCCTCACTC+TGG 0.514945 5:+87658498 MsG0580028855.01.T01:CDS
GCCAGGACAAATTACAAGAA+AGG 0.522389 5:+87661566 MsG0580028855.01.T01:CDS
GCTAGCAAATCGTAACTTTG+CGG 0.525431 5:-87660353 None:intergenic
TGTTAAACTTATGTCTTCCA+GGG 0.535878 5:+87662293 MsG0580028855.01.T01:CDS
GAAGGTATAAACTTCATCCC+TGG 0.535974 5:-87662310 None:intergenic
GCTGGTTGTTTATGCCCTGT+TGG 0.537691 5:+87661368 MsG0580028855.01.T01:CDS
TTTCTCAAATTCACCAAACA+TGG 0.542605 5:-87660375 None:intergenic
GCTCACATTGATGTTGTACA+AGG 0.543811 5:-87662600 None:intergenic
GAAGTAGAAGTGTACATAGC+AGG 0.549201 5:-87661988 None:intergenic
AAACATGAGTTCCTCCATCA+AGG 0.553023 5:-87660610 None:intergenic
TCGTTGAATCTGATATTCCA+AGG 0.555816 5:-87658428 None:intergenic
CTCAGAGACTAACTGATGGT+GGG 0.556902 5:+87661510 MsG0580028855.01.T01:CDS
TTGTTTAATTACGATGCACC+TGG 0.559289 5:+87661395 MsG0580028855.01.T01:CDS
AAACGAGAAGGTCAATGGAT+AGG 0.559566 5:+87662391 MsG0580028855.01.T01:CDS
ATACCAGATAGGTCCTCTCC+AGG 0.561435 5:-87661413 None:intergenic
TCTCAGAGACTAACTGATGG+TGG 0.562053 5:+87661509 MsG0580028855.01.T01:CDS
AATATTATGAGCCTCTAAGA+AGG 0.568473 5:-87662328 None:intergenic
GTGTACATAGCAGGTTCCAA+AGG 0.569923 5:-87661979 None:intergenic
AGGAACATGGAAGCTTTGAA+AGG 0.571446 5:+87658385 MsG0580028855.01.T01:CDS
TCTACCTTTCCTCACTCTGG+CGG 0.572108 5:+87658501 MsG0580028855.01.T01:CDS
AAATTACAAGAAAGGCGACC+AGG 0.572285 5:+87661574 MsG0580028855.01.T01:CDS
GAATGTATCTCTTATTGCAA+TGG 0.572758 5:+87662462 MsG0580028855.01.T01:CDS
CTCGGACATTGCATATACCA+TGG 0.573706 5:+87661339 MsG0580028855.01.T01:CDS
GGAAATTAGCCGTCTTATGG+AGG 0.574416 5:+87662415 MsG0580028855.01.T01:CDS
CTACGTCGTCAATACCAGAT+AGG 0.574667 5:-87661424 None:intergenic
ATCAGGTGGATGAAGCTATG+TGG 0.575999 5:+87660535 MsG0580028855.01.T01:intron
CGAGAAGGTCAATGGATAGG+TGG 0.576592 5:+87662394 MsG0580028855.01.T01:CDS
TTGTTATACGAAGTTGGTAA+GGG 0.583923 5:+87660293 MsG0580028855.01.T01:CDS
GCTTTGAAAGGTTCTTAACA+TGG 0.587490 5:+87658397 MsG0580028855.01.T01:CDS
TCAGGTGGATGAAGCTATGT+GGG 0.588137 5:+87660536 MsG0580028855.01.T01:intron
TCGGACATTGCATATACCAT+GGG 0.588653 5:+87661340 MsG0580028855.01.T01:CDS
GTATCGTCTTCAATAGATGT+TGG 0.593968 5:-87662216 None:intergenic
TAATTACGATGCACCTGGAG+AGG 0.595408 5:+87661400 MsG0580028855.01.T01:CDS
TGCTGTGAGAGATCTTAAGA+GGG 0.596123 5:+87658706 MsG0580028855.01.T01:CDS
TGTACATAGCAGGTTCCAAA+GGG 0.596868 5:-87661978 None:intergenic
ATGGAACAAGATCAGGAACA+TGG 0.596979 5:+87658372 MsG0580028855.01.T01:CDS
CATATACCATGGGATGAAGC+TGG 0.602506 5:+87661350 MsG0580028855.01.T01:CDS
CATAATAAAAGGAGGTCTGT+CGG 0.606789 5:+87662096 MsG0580028855.01.T01:CDS
GTGAGTTACCCGCCAGAGTG+AGG 0.607950 5:-87658510 None:intergenic
AAGAGAGGAAAGAGATTGGT+CGG 0.608429 5:-87658460 None:intergenic
AATTCTCAGAGACTAACTGA+TGG 0.621388 5:+87661506 MsG0580028855.01.T01:CDS
ATACTGGAGCCTCCATAAGA+CGG 0.630129 5:-87662424 None:intergenic
AGAAGCTCATGCCTTGATGG+AGG 0.631236 5:+87660599 MsG0580028855.01.T01:CDS
AAACAACCAGCTTCATCCCA+TGG 0.633574 5:-87661356 None:intergenic
GCAGCTAGAAGCGCAAACGA+AGG 0.634016 5:-87662051 None:intergenic
GCATAGAGAATGACCAAGAG+AGG 0.637672 5:-87658475 None:intergenic
TTAACATGGACATCACACCT+TGG 0.645130 5:+87658411 MsG0580028855.01.T01:CDS
TCACTCTATATCCATCCCAA+CGG 0.653728 5:+87662024 MsG0580028855.01.T01:CDS
TTACCCGCCAGAGTGAGGAA+AGG 0.662573 5:-87658505 None:intergenic
CAACCCCTCATAATAAAAGG+AGG 0.668522 5:+87662088 MsG0580028855.01.T01:CDS
GCTGTGAGAGATCTTAAGAG+GGG 0.713261 5:+87658707 MsG0580028855.01.T01:CDS
AATTAAACAAGTCACCAACA+GGG 0.716642 5:-87661382 None:intergenic
AGAGGAAAGAGATTGGTCGG+TGG 0.721272 5:-87658457 None:intergenic
GTAAGGGAAAGACTTCAAGG+TGG 0.809146 5:+87660309 MsG0580028855.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAATACAAAAAACTAT+TGG - Chr5:87659193-87659212 None:intergenic 10.0%
!!! ATTTATGATAAATTTTATTC+AGG - Chr5:87661670-87661689 None:intergenic 10.0%
!!! TTTATGATAAATTTTATTCA+GGG - Chr5:87661669-87661688 None:intergenic 10.0%
!! ATTTAATTCTTAAAATCGTA+GGG + Chr5:87659205-87659224 MsG0580028855.01.T01:intron 15.0%
!! TAACCAAAACAAAAATAAAA+GGG - Chr5:87660700-87660719 None:intergenic 15.0%
!! TATTTAATTCTTAAAATCGT+AGG + Chr5:87659204-87659223 MsG0580028855.01.T01:intron 15.0%
!! TCGAATTGAAAATATTTATA+TGG - Chr5:87661782-87661801 None:intergenic 15.0%
!! TTAACCAAAACAAAAATAAA+AGG - Chr5:87660701-87660720 None:intergenic 15.0%
!!! AATAGTTCTAACAAAAATAT+TGG - Chr5:87660134-87660153 None:intergenic 15.0%
!!! ATTTTTTAGTTTATCTCATT+AGG + Chr5:87660427-87660446 MsG0580028855.01.T01:intron 15.0%
!! AATTGAATATGTAAACCTAA+TGG - Chr5:87661630-87661649 None:intergenic 20.0%
!! ATGAAATTATAGTCATGAAA+TGG + Chr5:87662157-87662176 MsG0580028855.01.T01:CDS 20.0%
!! ATGTTGTAACAAACTTATTT+CGG + Chr5:87661135-87661154 MsG0580028855.01.T01:intron 20.0%
!! GAAATGATGTTATGATTAAT+TGG + Chr5:87662503-87662522 MsG0580028855.01.T01:exon 20.0%
!! TAATATCCCTTACAAAAATA+AGG - Chr5:87662551-87662570 None:intergenic 20.0%
!! TTCTAACAAAAATATTGGAT+TGG - Chr5:87660129-87660148 None:intergenic 20.0%
!! TTTGTAATTTCATTAAATGC+AGG - Chr5:87659247-87659266 None:intergenic 20.0%
!!! AGTGTTTAGATTTTAAATGA+TGG + Chr5:87662676-87662695 MsG0580028855.01.T01:three_prime_UTR 20.0%
!!! GTAGATAATTTTCAATCAAA+TGG + Chr5:87661443-87661462 MsG0580028855.01.T01:CDS 20.0%
!!! GTGTTTAGATTTTAAATGAT+GGG + Chr5:87662677-87662696 MsG0580028855.01.T01:three_prime_UTR 20.0%
!!! GTTTTTCCTTATTTTTGTAA+GGG + Chr5:87662542-87662561 MsG0580028855.01.T01:three_prime_UTR 20.0%
!!! TAATTTTAATTACCTTCCAT+TGG + Chr5:87660095-87660114 MsG0580028855.01.T01:intron 20.0%
!!! TATCTTAATTTGTGATTATC+AGG + Chr5:87660518-87660537 MsG0580028855.01.T01:intron 20.0%
! AATTGGTTGTAATGCAAATA+AGG + Chr5:87662520-87662539 MsG0580028855.01.T01:three_prime_UTR 25.0%
! AATTTGATCCATGAAATAGT+AGG + Chr5:87658938-87658957 MsG0580028855.01.T01:intron 25.0%
! ATCTGCAATATAAAAAAGCT+CGG - Chr5:87660260-87660279 None:intergenic 25.0%
! CATGACTATAATTTCATTGT+TGG - Chr5:87662154-87662173 None:intergenic 25.0%
! CATTGCAAAATGTTGTTAAT+CGG + Chr5:87659012-87659031 MsG0580028855.01.T01:intron 25.0%
! GGAAATTTAACATAACCATT+AGG + Chr5:87661612-87661631 MsG0580028855.01.T01:intron 25.0%
! TCCAAAACAATACAACAAAA+TGG - Chr5:87658663-87658682 None:intergenic 25.0%
! TCCATTATCAACTGTTAATT+AGG - Chr5:87659165-87659184 None:intergenic 25.0%
! TTCTTAACTTTACTTTAGTG+AGG + Chr5:87658852-87658871 MsG0580028855.01.T01:intron 25.0%
! TTCTTGTGTGATTAATCAAA+GGG + Chr5:87658589-87658608 MsG0580028855.01.T01:intron 25.0%
! TTTCATCTATAAAAACGAGA+AGG + Chr5:87662379-87662398 MsG0580028855.01.T01:CDS 25.0%
! TTTCTTGTGTGATTAATCAA+AGG + Chr5:87658588-87658607 MsG0580028855.01.T01:intron 25.0%
!! AATCCTTCACAAATTTTCTA+TGG - Chr5:87660822-87660841 None:intergenic 25.0%
!! GATGGATGATTTTCAATTTA+GGG + Chr5:87659356-87659375 MsG0580028855.01.T01:intron 25.0%
!!! ACCATTTTGTTGTATTGTTT+TGG + Chr5:87658659-87658678 MsG0580028855.01.T01:intron 25.0%
!!! ACCTAATTAACAGTTGATAA+TGG + Chr5:87659161-87659180 MsG0580028855.01.T01:intron 25.0%
!!! AGTTTTTAACATTTAAGGCT+TGG + Chr5:87660640-87660659 MsG0580028855.01.T01:CDS 25.0%
!!! GGTTTTTCCTTATTTTTGTA+AGG + Chr5:87662541-87662560 MsG0580028855.01.T01:three_prime_UTR 25.0%
!!! GTTTTTAACATTTAAGGCTT+GGG + Chr5:87660641-87660660 MsG0580028855.01.T01:CDS 25.0%
!!! TGATGGATGATTTTCAATTT+AGG + Chr5:87659355-87659374 MsG0580028855.01.T01:intron 25.0%
!!! TGATTCATTTTTTGTGTTCT+TGG + Chr5:87661186-87661205 MsG0580028855.01.T01:intron 25.0%
AAATGGAGACAAGAATGAAA+TGG + Chr5:87661460-87661479 MsG0580028855.01.T01:CDS 30.0%
AATAAGTTGTTTGTCCAAAC+AGG + Chr5:87660053-87660072 MsG0580028855.01.T01:intron 30.0%
AATTAAACAAGTCACCAACA+GGG - Chr5:87661385-87661404 None:intergenic 30.0%
ACTAAATTGACCGATCTAAA+GGG - Chr5:87659307-87659326 None:intergenic 30.0%
ATCATTCCCTATCTACTAAA+TGG - Chr5:87661845-87661864 None:intergenic 30.0%
ATTCCACCATTTAGTAGATA+GGG + Chr5:87661836-87661855 MsG0580028855.01.T01:intron 30.0%
ATTGTATGCATGGTTAAACT+AGG + Chr5:87660151-87660170 MsG0580028855.01.T01:intron 30.0%
CCAAAACAAAAATAAAAGGG+AGG - Chr5:87660697-87660716 None:intergenic 30.0%
CTATGGAACATACACAAATT+TGG + Chr5:87661897-87661916 MsG0580028855.01.T01:CDS 30.0%
GAATGTATCTCTTATTGCAA+TGG + Chr5:87662462-87662481 MsG0580028855.01.T01:CDS 30.0%
GATACATTCCTACTATTTCA+TGG - Chr5:87658949-87658968 None:intergenic 30.0%
GCCTTAAATGTTAAAAACTG+AGG - Chr5:87660639-87660658 None:intergenic 30.0%
TAAAAGACGTCGTCAAATAA+CGG + Chr5:87660979-87660998 MsG0580028855.01.T01:intron 30.0%
TAATTAAACAAGTCACCAAC+AGG - Chr5:87661386-87661405 None:intergenic 30.0%
TACAAAAAGCCAAATCAGAA+TGG + Chr5:87660574-87660593 MsG0580028855.01.T01:CDS 30.0%
TAGGTTAGATTATAGCATCT+TGG + Chr5:87660446-87660465 MsG0580028855.01.T01:intron 30.0%
TATAAAAACGAGAAGGTCAA+TGG + Chr5:87662386-87662405 MsG0580028855.01.T01:CDS 30.0%
TATGAAAACTGAACTGGTAT+GGG - Chr5:87659745-87659764 None:intergenic 30.0%
TATTTACTGCAGAGTGAAAT+AGG + Chr5:87662569-87662588 MsG0580028855.01.T01:three_prime_UTR 30.0%
TCAAAAACCAGATATCTTCT+CGG + Chr5:87661321-87661340 MsG0580028855.01.T01:intron 30.0%
TGAAGTTTATACCTTCTTAG+AGG + Chr5:87662317-87662336 MsG0580028855.01.T01:CDS 30.0%
TGTAGACTATGAACTATTAC+AGG + Chr5:87661739-87661758 MsG0580028855.01.T01:intron 30.0%
TGTTAAACTTATGTCTTCCA+GGG + Chr5:87662293-87662312 MsG0580028855.01.T01:CDS 30.0%
TGTTAGAACTATTGTATGCA+TGG + Chr5:87660141-87660160 MsG0580028855.01.T01:intron 30.0%
TTAACCAATGATGTCAATCA+CGG - Chr5:87661067-87661086 None:intergenic 30.0%
TTATGAAAACTGAACTGGTA+TGG - Chr5:87659746-87659765 None:intergenic 30.0%
TTGAAAATCATCCATCACAT+TGG - Chr5:87659352-87659371 None:intergenic 30.0%
TTGCCATAGAAAATTTGTGA+AGG + Chr5:87660816-87660835 MsG0580028855.01.T01:intron 30.0%
TTGGTTTATGAAAACTGAAC+TGG - Chr5:87659751-87659770 None:intergenic 30.0%
TTGTTAAACTTATGTCTTCC+AGG + Chr5:87662292-87662311 MsG0580028855.01.T01:CDS 30.0%
TTTACTCATGACAACTGAAA+TGG - Chr5:87661257-87661276 None:intergenic 30.0%
TTTCTCAAATTCACCAAACA+TGG - Chr5:87660378-87660397 None:intergenic 30.0%
! AATATTATGAGCCTCTAAGA+AGG - Chr5:87662331-87662350 None:intergenic 30.0%
! CTAGTCATTAAAGCAGATTT+TGG - Chr5:87658752-87658771 None:intergenic 30.0%
! GCCTCAGTTTTTAACATTTA+AGG + Chr5:87660635-87660654 MsG0580028855.01.T01:CDS 30.0%
! GGGATGAAAATTTTGTCATT+TGG - Chr5:87661961-87661980 None:intergenic 30.0%
! TGACAAAATTTTCATCCCTT+TGG + Chr5:87661963-87661982 MsG0580028855.01.T01:CDS 30.0%
! TGACATCATTGGTTAATGAT+AGG + Chr5:87661071-87661090 MsG0580028855.01.T01:intron 30.0%
!! AAATCTTTTGTTTGCCTTTC+TGG + Chr5:87661101-87661120 MsG0580028855.01.T01:intron 30.0%
!! ATAAGTTTTGTGAGACAGTT+TGG + Chr5:87659842-87659861 MsG0580028855.01.T01:intron 30.0%
!! CTTAATTTGTGATTATCAGG+TGG + Chr5:87660521-87660540 MsG0580028855.01.T01:intron 30.0%
!! TAAGTTTTGTGAGACAGTTT+GGG + Chr5:87659843-87659862 MsG0580028855.01.T01:intron 30.0%
!! TTGTTATACGAAGTTGGTAA+GGG + Chr5:87660293-87660312 MsG0580028855.01.T01:CDS 30.0%
!!! CCTCCCTTTTATTTTTGTTT+TGG + Chr5:87660694-87660713 MsG0580028855.01.T01:intron 30.0%
!!! CTTCTGTTGATGGTTTTTTT+AGG + Chr5:87658880-87658899 MsG0580028855.01.T01:intron 30.0%
!!! GCTGTTTTAATAAGCTATCT+TGG - Chr5:87659933-87659952 None:intergenic 30.0%
AACTTGACCATTTACCTGTT+TGG - Chr5:87660070-87660089 None:intergenic 35.0%
AAGAAGAAAAACCTGAACAG+AGG - Chr5:87658837-87658856 None:intergenic 35.0%
AATAGAACCTGGTGAAAACA+AGG - Chr5:87661874-87661893 None:intergenic 35.0%
AATTCTCAGAGACTAACTGA+TGG + Chr5:87661506-87661525 MsG0580028855.01.T01:CDS 35.0%
ACAAATTGTTGCCTGTCTTA+TGG + Chr5:87661715-87661734 MsG0580028855.01.T01:intron 35.0%
AGCTTCTTTCCATTCTGATT+TGG - Chr5:87660586-87660605 None:intergenic 35.0%
ATAAGCGCTCATCATGATAA+GGG + Chr5:87660012-87660031 MsG0580028855.01.T01:intron 35.0%
ATAGTCTACATCCATAAGAC+AGG - Chr5:87661729-87661748 None:intergenic 35.0%
ATTCCCTATCTACTAAATGG+TGG - Chr5:87661842-87661861 None:intergenic 35.0%
CAACAAGAACTCTCTTATAC+TGG - Chr5:87662443-87662462 None:intergenic 35.0%
CATAATAAAAGGAGGTCTGT+CGG + Chr5:87662096-87662115 MsG0580028855.01.T01:CDS 35.0%
CATTCCACCATTTAGTAGAT+AGG + Chr5:87661835-87661854 MsG0580028855.01.T01:intron 35.0%
CTATGTACACTTCTACTTCA+TGG + Chr5:87661992-87662011 MsG0580028855.01.T01:CDS 35.0%
CTCTTATTGCAATGGAATGT+TGG + Chr5:87662470-87662489 MsG0580028855.01.T01:CDS 35.0%
GACAAGTAATGCACATGAAA+AGG - Chr5:87661223-87661242 None:intergenic 35.0%
GACTAAATTGACCGATCTAA+AGG - Chr5:87659308-87659327 None:intergenic 35.0%
GTATCGTCTTCAATAGATGT+TGG - Chr5:87662219-87662238 None:intergenic 35.0%
TACCTTACTCTTGAATGCAT+TGG + Chr5:87662236-87662255 MsG0580028855.01.T01:CDS 35.0%
TAGCTTAGCAGTGTGTTAAA+TGG + Chr5:87660746-87660765 MsG0580028855.01.T01:intron 35.0%
TCACGGATAGCATAAAATAG+AGG - Chr5:87661050-87661069 None:intergenic 35.0%
TCGTTGAATCTGATATTCCA+AGG - Chr5:87658431-87658450 None:intergenic 35.0%
TCTCACAAAACTTATGTCAG+TGG - Chr5:87659837-87659856 None:intergenic 35.0%
TGAAGATAGAGCGAAAACAA+TGG - Chr5:87661817-87661836 None:intergenic 35.0%
TGTGCAATGTTAGAGACTAA+TGG + Chr5:87659782-87659801 MsG0580028855.01.T01:intron 35.0%
TGTTTGTCCAAACAGGTAAA+TGG + Chr5:87660060-87660079 MsG0580028855.01.T01:intron 35.0%
TTAGAGACTAATGGTCTGTT+TGG + Chr5:87659791-87659810 MsG0580028855.01.T01:intron 35.0%
TTATTTGCAGCTTAAAGCAC+AGG - Chr5:87660038-87660057 None:intergenic 35.0%
TTCCATAGCATAATAGAACC+TGG - Chr5:87661885-87661904 None:intergenic 35.0%
TTGGTTCAATAACCAATGGA+AGG - Chr5:87660110-87660129 None:intergenic 35.0%
TTGTTTAATTACGATGCACC+TGG + Chr5:87661395-87661414 MsG0580028855.01.T01:CDS 35.0%
! ACAGACCTCCTTTTATTATG+AGG - Chr5:87662096-87662115 None:intergenic 35.0%
! AGACCTCCTTTTATTATGAG+GGG - Chr5:87662094-87662113 None:intergenic 35.0%
! CAGACCTCCTTTTATTATGA+GGG - Chr5:87662095-87662114 None:intergenic 35.0%
! TGAGGTTTTTCTTCTGTTGA+TGG + Chr5:87658870-87658889 MsG0580028855.01.T01:intron 35.0%
! TTTTACTATGCAGCGTATAG+TGG - Chr5:87660964-87660983 None:intergenic 35.0%
!! ATGCATATTGCTTTTATGCC+AGG + Chr5:87661549-87661568 MsG0580028855.01.T01:CDS 35.0%
!! CTTGTTATACGAAGTTGGTA+AGG + Chr5:87660292-87660311 MsG0580028855.01.T01:CDS 35.0%
!! GCTTTGAAAGGTTCTTAACA+TGG + Chr5:87658397-87658416 MsG0580028855.01.T01:CDS 35.0%
!! GTTTGCTTGTTATACGAAGT+TGG + Chr5:87660287-87660306 MsG0580028855.01.T01:CDS 35.0%
!! TGGATTGGTTCAATAACCAA+TGG - Chr5:87660114-87660133 None:intergenic 35.0%
!!! TAAGTTACCTTGTTTTCACC+AGG + Chr5:87661864-87661883 MsG0580028855.01.T01:intron 35.0%
AAACATGAGTTCCTCCATCA+AGG - Chr5:87660613-87660632 None:intergenic 40.0%
AAACGAGAAGGTCAATGGAT+AGG + Chr5:87662391-87662410 MsG0580028855.01.T01:CDS 40.0%
AAATTACAAGAAAGGCGACC+AGG + Chr5:87661574-87661593 MsG0580028855.01.T01:CDS 40.0%
AACAGAGTCTGATCAAGAGA+CGG + Chr5:87659138-87659157 MsG0580028855.01.T01:intron 40.0%
AAGAGAGGAAAGAGATTGGT+CGG - Chr5:87658463-87658482 None:intergenic 40.0%
AATCGTAACTTTGCGGCAAA+TGG - Chr5:87660349-87660368 None:intergenic 40.0%
ACAAACGTCTACACCTTAAC+AGG - Chr5:87659707-87659726 None:intergenic 40.0%
ACCAAACGTCAAGTCTGTTA+AGG + Chr5:87659620-87659639 MsG0580028855.01.T01:intron 40.0%
AGAATGTTGCAGTAGAGGTT+TGG + Chr5:87658682-87658701 MsG0580028855.01.T01:intron 40.0%
AGTCAGTCCAGTCAAGATAT+AGG + Chr5:87659558-87659577 MsG0580028855.01.T01:intron 40.0%
AGTGATGAAACCAAATCGAC+AGG - Chr5:87660188-87660207 None:intergenic 40.0%
AGTGTGTTAAATGGTGGTCA+TGG + Chr5:87660755-87660774 MsG0580028855.01.T01:intron 40.0%
ATATAGGGAGCCAAATGGTA+TGG + Chr5:87659574-87659593 MsG0580028855.01.T01:intron 40.0%
ATGAAACCAAATCGACAGGT+GGG - Chr5:87660184-87660203 None:intergenic 40.0%
ATGGAACAAGATCAGGAACA+TGG + Chr5:87658372-87658391 MsG0580028855.01.T01:CDS 40.0%
ATTGCACACTTCAGGCAATT+TGG - Chr5:87659770-87659789 None:intergenic 40.0%
CAACCCCTCATAATAAAAGG+AGG + Chr5:87662088-87662107 MsG0580028855.01.T01:CDS 40.0%
CACCAGGTTCTATTATGCTA+TGG + Chr5:87661880-87661899 MsG0580028855.01.T01:intron 40.0%
CACTTCTACTTCATGGTCTA+AGG + Chr5:87661999-87662018 MsG0580028855.01.T01:CDS 40.0%
CATAAGCGCTCATCATGATA+AGG + Chr5:87660011-87660030 MsG0580028855.01.T01:intron 40.0%
CATTGATCCAAGTACCAGAA+AGG - Chr5:87661118-87661137 None:intergenic 40.0%
CTATCCGTGATTGACATCAT+TGG + Chr5:87661060-87661079 MsG0580028855.01.T01:intron 40.0%
CTCCAATGCATTCAAGAGTA+AGG - Chr5:87662241-87662260 None:intergenic 40.0%
CTTAGCAGTGTGTTAAATGG+TGG + Chr5:87660749-87660768 MsG0580028855.01.T01:intron 40.0%
GAATGTTGCAGTAGAGGTTT+GGG + Chr5:87658683-87658702 MsG0580028855.01.T01:intron 40.0%
GACTAATGGTCTGTTTGGAT+TGG + Chr5:87659796-87659815 MsG0580028855.01.T01:intron 40.0%
GCCAGGACAAATTACAAGAA+AGG + Chr5:87661566-87661585 MsG0580028855.01.T01:CDS 40.0%
GCTAGCAAATCGTAACTTTG+CGG - Chr5:87660356-87660375 None:intergenic 40.0%
GCTCACATTGATGTTGTACA+AGG - Chr5:87662603-87662622 None:intergenic 40.0%
GTATAGACGACCATACCATT+TGG - Chr5:87659587-87659606 None:intergenic 40.0%
GTCAGTCCAGTCAAGATATA+GGG + Chr5:87659559-87659578 MsG0580028855.01.T01:intron 40.0%
TCAAGATATAGGGAGCCAAA+TGG + Chr5:87659569-87659588 MsG0580028855.01.T01:intron 40.0%
TCACTCTATATCCATCCCAA+CGG + Chr5:87662024-87662043 MsG0580028855.01.T01:CDS 40.0%
TCGGACATTGCATATACCAT+GGG + Chr5:87661340-87661359 MsG0580028855.01.T01:CDS 40.0%
TCTCTAACATTGCACACTTC+AGG - Chr5:87659778-87659797 None:intergenic 40.0%
TGCTGTGAGAGATCTTAAGA+GGG + Chr5:87658706-87658725 MsG0580028855.01.T01:CDS 40.0%
TGTACATAGCAGGTTCCAAA+GGG - Chr5:87661981-87662000 None:intergenic 40.0%
TTAACAGACTTGACGTTTGG+TGG - Chr5:87659621-87659640 None:intergenic 40.0%
TTAACATGGACATCACACCT+TGG + Chr5:87658411-87658430 MsG0580028855.01.T01:CDS 40.0%
TTGGAGCTTCTTGAACACTA+TGG + Chr5:87661916-87661935 MsG0580028855.01.T01:CDS 40.0%
TTGGTAAGGGAAAGACTTCA+AGG + Chr5:87660306-87660325 MsG0580028855.01.T01:CDS 40.0%
TTTGGAGAATGTTGCAGTAG+AGG + Chr5:87658677-87658696 MsG0580028855.01.T01:intron 40.0%
! AACATTTAAGGCTTGGGTCT+GGG + Chr5:87660647-87660666 MsG0580028855.01.T01:CDS 40.0%
! AATCGGATTTGTTCCTCTGT+TGG + Chr5:87659029-87659048 MsG0580028855.01.T01:intron 40.0%
! GAAGGTATAAACTTCATCCC+TGG - Chr5:87662313-87662332 None:intergenic 40.0%
! GAAGTAGAAGTGTACATAGC+AGG - Chr5:87661991-87662010 None:intergenic 40.0%
! GACAGGCAACAATTTGTTTC+TGG - Chr5:87661712-87661731 None:intergenic 40.0%
! GCCTTTCTTGTAATTTGTCC+TGG - Chr5:87661570-87661589 None:intergenic 40.0%
! TAACATTTAAGGCTTGGGTC+TGG + Chr5:87660646-87660665 MsG0580028855.01.T01:CDS 40.0%
! TTGTTTGCCTTTCTGGTACT+TGG + Chr5:87661108-87661127 MsG0580028855.01.T01:intron 40.0%
!! AGGAACATGGAAGCTTTGAA+AGG + Chr5:87658385-87658404 MsG0580028855.01.T01:CDS 40.0%
!! GACTAGTGAGAGTGTTACTA+TGG + Chr5:87658766-87658785 MsG0580028855.01.T01:CDS 40.0%
!! TACGATTTGCTAGCCATGTT+TGG + Chr5:87660362-87660381 MsG0580028855.01.T01:CDS 40.0%
!! TCGTCAAATAACGGATAGAG+CGG + Chr5:87660988-87661007 MsG0580028855.01.T01:intron 40.0%
AAACAACCAGCTTCATCCCA+TGG - Chr5:87661359-87661378 None:intergenic 45.0%
ACCAAACGTCAAGCCTGTTA+AGG + Chr5:87659691-87659710 MsG0580028855.01.T01:intron 45.0%
ACCTTAACAGGCTTGACGTT+TGG - Chr5:87659695-87659714 None:intergenic 45.0%
ATACTGGAGCCTCCATAAGA+CGG - Chr5:87662427-87662446 None:intergenic 45.0%
ATCAGGTGGATGAAGCTATG+TGG + Chr5:87660535-87660554 MsG0580028855.01.T01:intron 45.0%
CACTACAATGTTGTCGACGA+CGG - Chr5:87660912-87660931 None:intergenic 45.0%
CATATACCATGGGATGAAGC+TGG + Chr5:87661350-87661369 MsG0580028855.01.T01:CDS 45.0%
CCATCACATTGGACTCATGA+AGG - Chr5:87659341-87659360 None:intergenic 45.0%
CCTTCATGAGTCCAATGTGA+TGG + Chr5:87659338-87659357 MsG0580028855.01.T01:intron 45.0%
CTACGTCGTCAATACCAGAT+AGG - Chr5:87661427-87661446 None:intergenic 45.0%
CTCAGAGACTAACTGATGGT+GGG + Chr5:87661510-87661529 MsG0580028855.01.T01:CDS 45.0%
CTCGGACATTGCATATACCA+TGG + Chr5:87661339-87661358 MsG0580028855.01.T01:CDS 45.0%
CTGGTTGAGTGTTCAAGTCA+TGG - Chr5:87659519-87659538 None:intergenic 45.0%
GAAAGAAGCTCATGCCTTGA+TGG + Chr5:87660596-87660615 MsG0580028855.01.T01:CDS 45.0%
GACCAAGAGAGGAAAGAGAT+TGG - Chr5:87658467-87658486 None:intergenic 45.0%
GACCAATCTCTTTCCTCTCT+TGG + Chr5:87658462-87658481 MsG0580028855.01.T01:CDS 45.0%
GATGAAACCAAATCGACAGG+TGG - Chr5:87660185-87660204 None:intergenic 45.0%
GCAATGTCCGAGAAGATATC+TGG - Chr5:87661331-87661350 None:intergenic 45.0%
GCATAGAGAATGACCAAGAG+AGG - Chr5:87658478-87658497 None:intergenic 45.0%
GCCATATAAACACGCCATTG+CGG - Chr5:87660868-87660887 None:intergenic 45.0%
GCCTTAACAGACTTGACGTT+TGG - Chr5:87659624-87659643 None:intergenic 45.0%
GCTATAGCACTGTAGCATAG+AGG + Chr5:87661012-87661031 MsG0580028855.01.T01:intron 45.0%
GCTGTGAGAGATCTTAAGAG+GGG + Chr5:87658707-87658726 MsG0580028855.01.T01:CDS 45.0%
GGAAATTAGCCGTCTTATGG+AGG + Chr5:87662415-87662434 MsG0580028855.01.T01:CDS 45.0%
GGGCAACCCCTCATAATAAA+AGG + Chr5:87662085-87662104 MsG0580028855.01.T01:CDS 45.0%
GGTGGAAATTAGCCGTCTTA+TGG + Chr5:87662412-87662431 MsG0580028855.01.T01:CDS 45.0%
GTAAGGGAAAGACTTCAAGG+TGG + Chr5:87660309-87660328 MsG0580028855.01.T01:CDS 45.0%
GTCGGACATCTTGCATATTC+TGG + Chr5:87662114-87662133 MsG0580028855.01.T01:CDS 45.0%
GTGCTGTGAGAGATCTTAAG+AGG + Chr5:87658705-87658724 MsG0580028855.01.T01:CDS 45.0%
GTGTACATAGCAGGTTCCAA+AGG - Chr5:87661982-87662001 None:intergenic 45.0%
GTTCCTACGAATACCAACAG+AGG - Chr5:87659045-87659064 None:intergenic 45.0%
GTTCCTCTGTTGGTATTCGT+AGG + Chr5:87659039-87659058 MsG0580028855.01.T01:intron 45.0%
GTTTCTACCTTTCCTCACTC+TGG + Chr5:87658498-87658517 MsG0580028855.01.T01:CDS 45.0%
TAATTACGATGCACCTGGAG+AGG + Chr5:87661400-87661419 MsG0580028855.01.T01:CDS 45.0%
TCAGGTGGATGAAGCTATGT+GGG + Chr5:87660536-87660555 MsG0580028855.01.T01:intron 45.0%
TCGCTCTAGTCCCTTTAGAT+CGG + Chr5:87659294-87659313 MsG0580028855.01.T01:intron 45.0%
TCTAGCTGCGTTACGATTGT+GGG + Chr5:87662065-87662084 MsG0580028855.01.T01:CDS 45.0%
TCTCAGAGACTAACTGATGG+TGG + Chr5:87661509-87661528 MsG0580028855.01.T01:CDS 45.0%
TGAAAGCCAAGCTATTGCTG+AGG + Chr5:87659466-87659485 MsG0580028855.01.T01:intron 45.0%
TTAACAGGCTTGACGTTTGG+TGG - Chr5:87659692-87659711 None:intergenic 45.0%
TTGCTGAGGCTGGACTTTAT+TGG + Chr5:87659480-87659499 MsG0580028855.01.T01:intron 45.0%
TTGGCTCCCTATATCTTGAC+TGG - Chr5:87659568-87659587 None:intergenic 45.0%
! GCAAACGAAGGTTTTCCGTT+GGG - Chr5:87662042-87662061 None:intergenic 45.0%
! TTCTAGCTGCGTTACGATTG+TGG + Chr5:87662064-87662083 MsG0580028855.01.T01:CDS 45.0%
!! ACGTTTGGTGGACTGTAAAC+TGG - Chr5:87659680-87659699 None:intergenic 45.0%
!! ACTTGACGTTTGGTGGATTG+TGG - Chr5:87659614-87659633 None:intergenic 45.0%
!! GGTGGACTGTAAACTGGTAT+GGG - Chr5:87659674-87659693 None:intergenic 45.0%
!! TGGTGGACTGTAAACTGGTA+TGG - Chr5:87659675-87659694 None:intergenic 45.0%
AACTTTGCGGCAAATGGACG+AGG - Chr5:87660343-87660362 None:intergenic 50.0%
AATGTTGTCGACGACGGATG+GGG - Chr5:87660906-87660925 None:intergenic 50.0%
ACAATGTTGTCGACGACGGA+TGG - Chr5:87660908-87660927 None:intergenic 50.0%
ACCAGGTAGTGCACAACTCT+TGG + Chr5:87661591-87661610 MsG0580028855.01.T01:intron 50.0%
AGAAGCTCATGCCTTGATGG+AGG + Chr5:87660599-87660618 MsG0580028855.01.T01:CDS 50.0%
AGCAAGATCCAACTCAGCAC+TGG - Chr5:87659538-87659557 None:intergenic 50.0%
AGGCTGGACTTTATTGGACG+AGG + Chr5:87659486-87659505 MsG0580028855.01.T01:intron 50.0%
ATACCAGATAGGTCCTCTCC+AGG - Chr5:87661416-87661435 None:intergenic 50.0%
ATCGTAGGGAGAAGACGATC+TGG + Chr5:87659219-87659238 MsG0580028855.01.T01:intron 50.0%
CAATGTTGTCGACGACGGAT+GGG - Chr5:87660907-87660926 None:intergenic 50.0%
CGAGAAGGTCAATGGATAGG+TGG + Chr5:87662394-87662413 MsG0580028855.01.T01:CDS 50.0%
GCCGCAATGGCGTGTTTATA+TGG + Chr5:87660864-87660883 MsG0580028855.01.T01:intron 50.0%
GCTGGTTGTTTATGCCCTGT+TGG + Chr5:87661368-87661387 MsG0580028855.01.T01:CDS 50.0%
TCCAAGAGTTGTGCACTACC+TGG - Chr5:87661595-87661614 None:intergenic 50.0%
TCTACCTTTCCTCACTCTGG+CGG + Chr5:87658501-87658520 MsG0580028855.01.T01:CDS 50.0%
TTGTGAAGGATTGCCTGCCA+TGG + Chr5:87660830-87660849 MsG0580028855.01.T01:intron 50.0%
! ACACTCAACCAGTGCTGAGT+TGG + Chr5:87659527-87659546 MsG0580028855.01.T01:intron 50.0%
! ACGAAGGTTTTCCGTTGGGA+TGG - Chr5:87662038-87662057 None:intergenic 50.0%
! AGAGGAAAGAGATTGGTCGG+TGG - Chr5:87658460-87658479 None:intergenic 50.0%
! ATTACGCCCACCTGTCGATT+TGG + Chr5:87660175-87660194 MsG0580028855.01.T01:intron 50.0%
! CGCAAACGAAGGTTTTCCGT+TGG - Chr5:87662043-87662062 None:intergenic 50.0%
! CTGATTTGCACAGCCCAGTT+GGG + Chr5:87659416-87659435 MsG0580028855.01.T01:intron 50.0%
! TGATTTGCACAGCCCAGTTG+GGG + Chr5:87659417-87659436 MsG0580028855.01.T01:intron 50.0%
!! ACGTTTGGTGGATTGTGGTC+TGG - Chr5:87659609-87659628 None:intergenic 50.0%
AGCCAAGCTATTGCTGAGGC+TGG + Chr5:87659470-87659489 MsG0580028855.01.T01:intron 55.0%
ATGTTGTCGACGACGGATGG+GGG - Chr5:87660905-87660924 None:intergenic 55.0%
ATTTGCCACGCCATCCTCCA+TGG - Chr5:87660786-87660805 None:intergenic 55.0%
CTACCTTTCCTCACTCTGGC+GGG + Chr5:87658502-87658521 MsG0580028855.01.T01:CDS 55.0%
CTCTCGTCTCTCCTCTGTTC+AGG + Chr5:87658823-87658842 MsG0580028855.01.T01:CDS 55.0%
GATTTGCACAGCCCAGTTGG+GGG + Chr5:87659418-87659437 MsG0580028855.01.T01:intron 55.0%
GTCCAGCCTCAGCAATAGCT+TGG - Chr5:87659475-87659494 None:intergenic 55.0%
TGAAGGATTGCCTGCCATGG+AGG + Chr5:87660833-87660852 MsG0580028855.01.T01:intron 55.0%
TGCGGCAAATGGACGAGGTA+AGG - Chr5:87660338-87660357 None:intergenic 55.0%
TTACCCGCCAGAGTGAGGAA+AGG - Chr5:87658508-87658527 None:intergenic 55.0%
! GCAGCTAGAAGCGCAAACGA+AGG - Chr5:87662054-87662073 None:intergenic 55.0%
!! GCTGATTTGCACAGCCCAGT+TGG + Chr5:87659415-87659434 MsG0580028855.01.T01:intron 55.0%
AAACACGCCATTGCGGCCCA+TGG - Chr5:87660861-87660880 None:intergenic 60.0%
GCACCTGGAGAGGACCTATC+TGG + Chr5:87661410-87661429 MsG0580028855.01.T01:CDS 60.0%
GTGAGTTACCCGCCAGAGTG+AGG - Chr5:87658513-87658532 None:intergenic 60.0%
TTGGGTCTGGGCTGCTGCAA+CGG + Chr5:87660659-87660678 MsG0580028855.01.T01:CDS 60.0%
ATGCCAAGCGTGCCCCCAAC+TGG - Chr5:87659433-87659452 None:intergenic 65.0%
GCCTGCCATGGAGGCTCCAT+GGG + Chr5:87660842-87660861 MsG0580028855.01.T01:intron 65.0%
TGCCAAGCGTGCCCCCAACT+GGG - Chr5:87659432-87659451 None:intergenic 65.0%
TGCCACGCCATCCTCCATGG+CGG - Chr5:87660783-87660802 None:intergenic 65.0%
TGCCTGCCATGGAGGCTCCA+TGG + Chr5:87660841-87660860 MsG0580028855.01.T01:intron 65.0%
! AGTTGGGGGCACGCTTGGCA+TGG + Chr5:87659432-87659451 MsG0580028855.01.T01:intron 65.0%
!! CATGGTGCCGCCATGGAGGA+TGG + Chr5:87660773-87660792 MsG0580028855.01.T01:intron 65.0%
!! TGGTCATGGTGCCGCCATGG+AGG + Chr5:87660769-87660788 MsG0580028855.01.T01:intron 65.0%
!! TGGTGGTCATGGTGCCGCCA+TGG + Chr5:87660766-87660785 MsG0580028855.01.T01:intron 65.0%
GCCCATGGAGCCTCCATGGC+AGG - Chr5:87660846-87660865 None:intergenic 70.0%
GGAGGCTCCATGGGCCGCAA+TGG + Chr5:87660851-87660870 MsG0580028855.01.T01:intron 70.0%
TGCCGCCATGGAGGATGGCG+TGG + Chr5:87660778-87660797 MsG0580028855.01.T01:intron 70.0%
TGCGGCCCATGGAGCCTCCA+TGG - Chr5:87660850-87660869 None:intergenic 70.0%
! AGCCCAGTTGGGGGCACGCT+TGG + Chr5:87659427-87659446 MsG0580028855.01.T01:intron 70.0%
! GGGGGCACGCTTGGCATGGT+TGG + Chr5:87659436-87659455 MsG0580028855.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 87658372 87662729 87658372 ID=MsG0580028855.01;Name=MsG0580028855.01
Chr5 mRNA 87658372 87662729 87658372 ID=MsG0580028855.01.T01;Parent=MsG0580028855.01;Name=MsG0580028855.01.T01;_AED=0.43;_eAED=0.43;_QI=0|0.8|0.5|1|1|1|6|220|487
Chr5 exon 87658372 87658523 87658372 ID=MsG0580028855.01.T01:exon:44752;Parent=MsG0580028855.01.T01
Chr5 exon 87658694 87658844 87658694 ID=MsG0580028855.01.T01:exon:44753;Parent=MsG0580028855.01.T01
Chr5 exon 87660278 87660409 87660278 ID=MsG0580028855.01.T01:exon:44754;Parent=MsG0580028855.01.T01
Chr5 exon 87660540 87660680 87660540 ID=MsG0580028855.01.T01:exon:44755;Parent=MsG0580028855.01.T01
Chr5 exon 87661332 87661595 87661332 ID=MsG0580028855.01.T01:exon:44756;Parent=MsG0580028855.01.T01
Chr5 exon 87661886 87662729 87661886 ID=MsG0580028855.01.T01:exon:44757;Parent=MsG0580028855.01.T01
Chr5 CDS 87658372 87658523 87658372 ID=MsG0580028855.01.T01:cds;Parent=MsG0580028855.01.T01
Chr5 CDS 87658694 87658844 87658694 ID=MsG0580028855.01.T01:cds;Parent=MsG0580028855.01.T01
Chr5 CDS 87660278 87660409 87660278 ID=MsG0580028855.01.T01:cds;Parent=MsG0580028855.01.T01
Chr5 CDS 87660540 87660680 87660540 ID=MsG0580028855.01.T01:cds;Parent=MsG0580028855.01.T01
Chr5 CDS 87661332 87661595 87661332 ID=MsG0580028855.01.T01:cds;Parent=MsG0580028855.01.T01
Chr5 CDS 87661886 87662509 87661886 ID=MsG0580028855.01.T01:cds;Parent=MsG0580028855.01.T01
Chr5 three_prime_UTR 87662510 87662729 87662510 ID=MsG0580028855.01.T01:three_prime_utr;Parent=MsG0580028855.01.T01
Gene Sequence

>MsG0580028855.01.T01

ATGGAACAAGATCAGGAACATGGAAGCTTTGAAAGGTTCTTAACATGGACATCACACCTTGGAATATCAGATTCAACGAAAACAACCACCGACCAATCTCTTTCCTCTCTTGGTCATTCTCTATGCGTTTCTACCTTTCCTCACTCTGGCGGTAGAGGTTTGGGTGCTGTGAGAGATCTTAAGAGGGGAGAAATTATTCTAAGAGTTCCAAAATCTGCTTTAATGACTAGTGAGAGTGTTACTATGGAAGATAAGAAGCTATGTCTTGCTGTCAATAGACACTCTCGTCTCTCCTCTGTTCAGATATTGACTGTTTGCTTGTTATACGAAGTTGGTAAGGGAAAGACTTCAAGGTGGCATCCTTACCTCGTCCATTTGCCGCAAAGTTACGATTTGCTAGCCATGTTTGGTGAATTTGAGAAACAAGCTCTGCAAGTGGATGAAGCTATGTGGGTCACAGAAAAAGCTGTACAAAAAGCCAAATCAGAATGGAAAGAAGCTCATGCCTTGATGGAGGAACTCATGTTTAAGCCTCAGTTTTTAACATTTAAGGCTTGGGTCTGGGCTGCTGCAACGATATCTTCTCGGACATTGCATATACCATGGGATGAAGCTGGTTGTTTATGCCCTGTTGGTGACTTGTTTAATTACGATGCACCTGGAGAGGACCTATCTGGTATTGACGACGTAGATAATTTTCAATCAAATGGAGACAAGAATGAAATGGTAGACGAAGAGCATATTGATTTTAATTCTCAGAGACTAACTGATGGTGGGTTTGAAGAAGATGCTAATGCATATTGCTTTTATGCCAGGACAAATTACAAGAAAGGCGACCAGGTTCTATTATGCTATGGAACATACACAAATTTGGAGCTTCTTGAACACTATGGATTTCTCTTGCAAGAAAATCCAAATGACAAAATTTTCATCCCTTTGGAACCTGCTATGTACACTTCTACTTCATGGTCTAAGGAATCACTCTATATCCATCCCAACGGAAAACCTTCGTTTGCGCTTCTAGCTGCGTTACGATTGTGGGCAACCCCTCATAATAAAAGGAGGTCTGTCGGACATCTTGCATATTCTGGTTCTCAACTGTCTGCCAACAATGAAATTATAGTCATGAAATGGTTGTCGAAAACTTGTGACACTGTCTTAAAGAATATGCCAACATCTATTGAAGACGATACCTTACTCTTGAATGCATTGGAGTGTAGTCAAGACTTTATAACTTTCATGAAGATTGTTAAACTTATGTCTTCCAGGGATGAAGTTTATACCTTCTTAGAGGCTCATAATATTACAGACGCACTTAGTTTTTCTGATATGATTTCATCTATAAAAACGAGAAGGTCAATGGATAGGTGGAAATTAGCCGTCTTATGGAGGCTCCAGTATAAGAGAGTTCTTGTTGAATGTATCTCTTATTGCAATGGAATGTTGGATTCTTTCATGAAATGA
Protein sequence

>MsG0580028855.01.T01

MEQDQEHGSFERFLTWTSHLGISDSTKTTTDQSLSSLGHSLCVSTFPHSGGRGLGAVRDLKRGEIILRVPKSALMTSESVTMEDKKLCLAVNRHSRLSSVQILTVCLLYEVGKGKTSRWHPYLVHLPQSYDLLAMFGEFEKQALQVDEAMWVTEKAVQKAKSEWKEAHALMEELMFKPQFLTFKAWVWAAATISSRTLHIPWDEAGCLCPVGDLFNYDAPGEDLSGIDDVDNFQSNGDKNEMVDEEHIDFNSQRLTDGGFEEDANAYCFYARTNYKKGDQVLLCYGTYTNLELLEHYGFLLQENPNDKIFIPLEPAMYTSTSWSKESLYIHPNGKPSFALLAALRLWATPHNKRRSVGHLAYSGSQLSANNEIIVMKWLSKTCDTVLKNMPTSIEDDTLLLNALECSQDFITFMKIVKLMSSRDEVYTFLEAHNITDALSFSDMISSIKTRRSMDRWKLAVLWRLQYKRVLVECISYCNGMLDSFMK*