AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022672.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022672.01.T01 MTR_4g094258 98.448 451 6 1 1 450 1 451 0.0 917
MsG0480022672.01.T01 MTR_4g094258 92.018 451 5 2 1 450 1 421 0.0 836
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022672.01.T01 AT2G13840 62.619 420 151 3 31 448 17 432 0.0 541

Find 132 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATCTCTTGTTGATGATTT+TGG 0.031208 4:-75362081 MsG0480022672.01.T01:CDS
CAAACCTTGTAATTGTTTCT+AGG 0.169257 4:+75358868 None:intergenic
AACAAATTTAACAATAAAAT+TGG 0.172762 4:+75358604 None:intergenic
TTGATCATTGTTTACCTCTT+TGG 0.224468 4:-75358791 MsG0480022672.01.T01:CDS
AAAATCCTGTTGCTATTATT+AGG 0.255436 4:-75360311 MsG0480022672.01.T01:CDS
CCTTACAGGGAAGGGATCTT+TGG 0.260399 4:+75362411 None:intergenic
CACTTCCCAGTTCAGATTCA+TGG 0.274753 4:+75359003 None:intergenic
CCTCATTTCTCTTCATATAT+AGG 0.280119 4:-75362375 MsG0480022672.01.T01:five_prime_UTR
CTATATGGTGCAATGCTATA+AGG 0.299389 4:-75358932 MsG0480022672.01.T01:CDS
GAAGGGTAGGTTACCCTTAC+AGG 0.304144 4:+75362397 None:intergenic
CAATGCTATAAGGGAATTAT+TGG 0.306066 4:-75358922 MsG0480022672.01.T01:CDS
GATGACCCATGAACAAGTTT+TGG 0.306632 4:-75362160 MsG0480022672.01.T01:CDS
CGGGCTACATGGAGCCTTCC+GGG 0.310253 4:+75360588 None:intergenic
GTAGAATCGGCTCGCAAATA+TGG 0.314220 4:-75361302 MsG0480022672.01.T01:CDS
AAAAGTGATGGAAGGCTTGC+AGG 0.316738 4:-75360249 MsG0480022672.01.T01:intron
TTAAGGTAGCTAGGCCTATA+TGG 0.320672 4:-75358947 MsG0480022672.01.T01:CDS
ATAAAAGGGTAAGCCGTAAA+TGG 0.327163 4:-75362510 None:intergenic
CTAGAAACAATTACAAGGTT+TGG 0.330990 4:-75358867 MsG0480022672.01.T01:CDS
TGTAACTGAATGGGTTTCAT+TGG 0.360755 4:-75362127 MsG0480022672.01.T01:CDS
TAAAAGCCAAAACTTGTTCA+TGG 0.361148 4:+75362154 None:intergenic
TAGAAACAATTACAAGGTTT+GGG 0.368543 4:-75358866 MsG0480022672.01.T01:CDS
TTGCCGTTCTGGCTCATCCA+TGG 0.379810 4:-75360341 MsG0480022672.01.T01:CDS
GAGCATGTTTGTAGGATTGC+AGG 0.382471 4:-75360624 MsG0480022672.01.T01:CDS
TTCCAACGTTTCTACCAGTC+AGG 0.399060 4:-75358715 MsG0480022672.01.T01:CDS
TTAGCATATTACAGCAGTAT+TGG 0.401822 4:-75360762 MsG0480022672.01.T01:CDS
GCGATACCATCTCCCATAAC+TGG 0.402455 4:+75362270 None:intergenic
AGGACACCATGAATCTGAAC+TGG 0.403868 4:-75359009 MsG0480022672.01.T01:CDS
GATGAAGTAGCGAAAGAAGA+AGG 0.406465 4:+75362099 None:intergenic
CCAAAGATCCCTTCCCTGTA+AGG 0.412520 4:-75362411 MsG0480022672.01.T01:five_prime_UTR
AACCTCCTAATAATAGCAAC+AGG 0.413958 4:+75360306 None:intergenic
TAATATGCTAAAACGTGAAC+AGG 0.417023 4:+75360774 None:intergenic
TTAAATGGGAGCATGTTTGT+AGG 0.422997 4:-75360632 MsG0480022672.01.T01:CDS
TTAAAAGAAGCAGGCCTTCA+TGG 0.425114 4:-75360285 MsG0480022672.01.T01:CDS
CTTATAGCATTGCACCATAT+AGG 0.426022 4:+75358933 None:intergenic
CAATTCAAACAAGAGCAATA+AGG 0.426821 4:-75362232 MsG0480022672.01.T01:CDS
GATGGAAAATGAAGAGTTTG+AGG 0.430917 4:-75358754 MsG0480022672.01.T01:CDS
ACGGGCTACATGGAGCCTTC+CGG 0.436221 4:+75360587 None:intergenic
CAAATCCTTTCCACAATACA+AGG 0.438699 4:+75358815 None:intergenic
TATATGGTGCAATGCTATAA+GGG 0.441866 4:-75358931 MsG0480022672.01.T01:CDS
TTCTAAGTCTCTATGAGAAC+CGG 0.445315 4:+75358684 None:intergenic
AAGTCATGCAAAACTAGTAC+TGG 0.451309 4:+75358972 None:intergenic
CAACCATAGCACGGGCTACA+TGG 0.457224 4:+75360577 None:intergenic
CGAGCCGATTCTACAGCCTC+GGG 0.458504 4:+75361311 None:intergenic
GCTCTCTCAACAACCTTAGA+AGG 0.460070 4:+75361973 None:intergenic
GTCACAGCATATAGGTTTGA+AGG 0.460519 4:-75362452 MsG0480022672.01.T01:five_prime_UTR
TCTGACAGATCACGATACTA+TGG 0.460637 4:-75361342 MsG0480022672.01.T01:CDS
GCATATAGGTTTGAAGGGTT+AGG 0.464040 4:-75362446 MsG0480022672.01.T01:five_prime_UTR
TGCCGTTCTGGCTCATCCAT+GGG 0.473635 4:-75360340 MsG0480022672.01.T01:CDS
CATCCCCGAGGCTGTAGAAT+CGG 0.477174 4:-75361315 MsG0480022672.01.T01:CDS
ATGACTTTCTTAAGGTAGCT+AGG 0.478259 4:-75358956 MsG0480022672.01.T01:CDS
ATTAGGAGGTTAAAAGAAGC+AGG 0.481000 4:-75360294 MsG0480022672.01.T01:CDS
TTTATTGCTTCCTCCACCAC+AGG 0.488429 4:+75360387 None:intergenic
AACCGGAGTTCCTCCCTGAC+TGG 0.502354 4:+75358701 None:intergenic
AAAAGCCAAAACTTGTTCAT+GGG 0.503915 4:+75362155 None:intergenic
TAAAACTTACGCCGTTCATG+TGG 0.507053 4:+75361950 None:intergenic
CTCAATCCAGTTATGGGAGA+TGG 0.507268 4:-75362276 MsG0480022672.01.T01:exon
TTGGTTAAGTAGCCAAGAGA+TGG 0.514042 4:-75358772 MsG0480022672.01.T01:CDS
TATTGGACCATCAAAATTTG+AGG 0.515732 4:-75360745 MsG0480022672.01.T01:CDS
GGGAAGTGAACCTGTGGTGG+AGG 0.520171 4:-75360397 MsG0480022672.01.T01:CDS
ATGAAGTAGCGAAAGAAGAA+GGG 0.523100 4:+75362100 None:intergenic
GAAGAGAAATGAGGAAGGGT+AGG 0.523647 4:+75362384 None:intergenic
TGTAGACCTCCATCCCATGA+AGG 0.525586 4:+75360271 None:intergenic
TAAAAGAAGCAGGCCTTCAT+GGG 0.526089 4:-75360284 MsG0480022672.01.T01:CDS
ATTAACCCAATATATAATCA+TGG 0.528341 4:-75357884 MsG0480022672.01.T01:intron
TTCACCCTTGTATTGTGGAA+AGG 0.529199 4:-75358820 MsG0480022672.01.T01:CDS
ATTGGAGGGTCAGACTATCA+TGG 0.530154 4:-75359038 MsG0480022672.01.T01:CDS
GCGAGCCGATTCTACAGCCT+CGG 0.530385 4:+75361310 None:intergenic
GCCCGTGCTATGGTTGAAGC+AGG 0.533657 4:-75360570 MsG0480022672.01.T01:CDS
GCTCCATGTAGCCCGTGCTA+TGG 0.537065 4:-75360580 MsG0480022672.01.T01:CDS
AACGTTGGAAAGCTTCAACT+TGG 0.537287 4:+75358728 None:intergenic
CTCTTCATATATAGGTTCAG+AGG 0.537326 4:-75362367 MsG0480022672.01.T01:five_prime_UTR
CAGGGGAAGTGAACCTGTGG+TGG 0.538470 4:-75360400 MsG0480022672.01.T01:CDS
AACAATAATATCAGAAACGT+TGG 0.540630 4:+75358519 None:intergenic
TACCAGTCAGGGAGGAACTC+CGG 0.543925 4:-75358703 MsG0480022672.01.T01:CDS
AGAAGCAGGCCTTCATGGGA+TGG 0.546814 4:-75360280 MsG0480022672.01.T01:CDS
GGAGGTTCACCCTTGTATTG+TGG 0.547408 4:-75358825 MsG0480022672.01.T01:CDS
AAGAAGAATAAGAACAGAGG+TGG 0.548356 4:-75362195 MsG0480022672.01.T01:CDS
CTAACCTAGAAACAATTACA+AGG 0.549045 4:-75358872 MsG0480022672.01.T01:CDS
GTTAGTATTAGACGGTTCCT+CGG 0.549211 4:+75358890 None:intergenic
ATCCTGTTGCTATTATTAGG+AGG 0.550357 4:-75360308 MsG0480022672.01.T01:CDS
GCAGGCAACGGAGTTGCTCC+CGG 0.551611 4:-75360606 MsG0480022672.01.T01:CDS
ATTGTACTAACTTCAACACC+TGG 0.552254 4:+75361266 None:intergenic
GAAGGGATCTTTGGAGTCAC+AGG 0.554861 4:+75362420 None:intergenic
GTTTCTAGGTTAGTATTAGA+CGG 0.556827 4:+75358882 None:intergenic
CAATATTACTTGGAGTAAGC+AGG 0.557337 4:+75360495 None:intergenic
GGGTCAGACTATCATGGAAG+AGG 0.560598 4:-75359032 MsG0480022672.01.T01:CDS
CAAAGATCCCTTCCCTGTAA+GGG 0.562726 4:-75362410 MsG0480022672.01.T01:five_prime_UTR
TCAAACCTATATGCTGTGAC+AGG 0.563060 4:+75362455 None:intergenic
TAGGTTACCCTTACAGGGAA+GGG 0.565166 4:+75362403 None:intergenic
AAGAAGAAGAATAAGAACAG+AGG 0.572930 4:-75362198 MsG0480022672.01.T01:CDS
TCACAGCATATAGGTTTGAA+GGG 0.577719 4:-75362451 MsG0480022672.01.T01:five_prime_UTR
ATGGAGGTCTACAAAAGTGA+TGG 0.578050 4:-75360261 MsG0480022672.01.T01:CDS
GTAGGTTACCCTTACAGGGA+AGG 0.578104 4:+75362402 None:intergenic
ACCCACCTGTCACAGCATAT+AGG 0.579297 4:-75362460 MsG0480022672.01.T01:five_prime_UTR
TCCCTGACTGGTAGAAACGT+TGG 0.579843 4:+75358713 None:intergenic
ACCTGCTTCAACCATAGCAC+GGG 0.581188 4:+75360569 None:intergenic
AACCTGCTTCAACCATAGCA+CGG 0.582016 4:+75360568 None:intergenic
TTTGGGGTGCAGAAGCCTGT+TGG 0.583868 4:-75362063 MsG0480022672.01.T01:CDS
GTTTGTAGGATTGCAGGCAA+CGG 0.584225 4:-75360618 MsG0480022672.01.T01:CDS
TCCAACGTTTCTACCAGTCA+GGG 0.584764 4:-75358714 MsG0480022672.01.T01:CDS
TATGGCATTAAGATAATCCC+AGG 0.585730 4:-75361284 MsG0480022672.01.T01:CDS
GTTGAGAGAGCCCACATGAA+CGG 0.586954 4:-75361961 MsG0480022672.01.T01:CDS
CCTATATATGAAGAGAAATG+AGG 0.589138 4:+75362375 None:intergenic
AGTGACCTGGCTGATGCCTA+CGG 0.590587 4:-75359071 MsG0480022672.01.T01:CDS
AACCTATATGCTGTGACAGG+TGG 0.591862 4:+75362458 None:intergenic
TGTCACTCTAAATGCAGTGA+TGG 0.597504 4:-75362006 MsG0480022672.01.T01:CDS
TGCCCATGGATGAGCCAGAA+CGG 0.598033 4:+75360338 None:intergenic
ACAGATCACGATACTATGGC+AGG 0.600390 4:-75361338 MsG0480022672.01.T01:CDS
GCAACGGAGTTGCTCCCGGA+AGG 0.600663 4:-75360602 MsG0480022672.01.T01:CDS
AAAGGCCGTAGGCATCAGCC+AGG 0.611891 4:+75359066 None:intergenic
TATATGAAGAGAAATGAGGA+AGG 0.613178 4:+75362379 None:intergenic
ATATGAAGAGAAATGAGGAA+GGG 0.626865 4:+75362380 None:intergenic
AGCAGGCCTTCATGGGATGG+AGG 0.629146 4:-75360277 MsG0480022672.01.T01:CDS
TCAGACTATCATGGAAGAGG+AGG 0.633037 4:-75359029 MsG0480022672.01.T01:CDS
TGGTGGAGACACTGAAGCAG+AGG 0.633552 4:-75360799 MsG0480022672.01.T01:CDS
CATGCAAAACTAGTACTGGA+AGG 0.634426 4:+75358976 None:intergenic
ACCTATATGCTGTGACAGGT+GGG 0.635622 4:+75362459 None:intergenic
ATTATTGGAGTGTTATGCCG+AGG 0.638655 4:-75358907 MsG0480022672.01.T01:CDS
AAGGGTAGGTTACCCTTACA+GGG 0.640453 4:+75362398 None:intergenic
AGGTCTACAAAAGTGATGGA+AGG 0.642912 4:-75360257 MsG0480022672.01.T01:CDS
TTGTACTAACTTCAACACCT+GGG 0.643477 4:+75361267 None:intergenic
TCTTGGCTACTTAACCAAAG+AGG 0.654559 4:+75358777 None:intergenic
AAAACTTACGCCGTTCATGT+GGG 0.655200 4:+75361951 None:intergenic
TTATCTTCGAGCAAAGAACA+TGG 0.660434 4:-75360685 MsG0480022672.01.T01:CDS
TTTCAGGGGAAGTGAACCTG+TGG 0.661634 4:-75360403 MsG0480022672.01.T01:intron
GTATGCAGCATATAGTGACC+TGG 0.671490 4:-75359084 MsG0480022672.01.T01:intron
GGACACCATGAATCTGAACT+GGG 0.676928 4:-75359008 MsG0480022672.01.T01:CDS
AAATCCTTTCCACAATACAA+GGG 0.689638 4:+75358816 None:intergenic
TACTATGGCAGGCATCCCCG+AGG 0.703124 4:-75361327 MsG0480022672.01.T01:CDS
AACGTTTCTACCAGTCAGGG+AGG 0.703221 4:-75358711 MsG0480022672.01.T01:CDS
GAGCCGATTCTACAGCCTCG+GGG 0.740138 4:+75361312 None:intergenic
AAAATGATTTGTGATACTGG+GGG 0.788482 4:-75360366 MsG0480022672.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAAATTTAACAATAAAAT+TGG + Chr4:75361772-75361791 None:intergenic 10.0%
!!! AATTTTATTGTTAAATTTGT+TGG - Chr4:75361771-75361790 MsG0480022672.01.T01:intron 10.0%
!!! ATTATGGTTATTATTTTATA+AGG - Chr4:75358787-75358806 MsG0480022672.01.T01:CDS 10.0%
!!! ATTTTTGTTGAAATATATAA+GGG - Chr4:75361934-75361953 MsG0480022672.01.T01:intron 10.0%
!!! ATTTTTGTTTGAATTATTTA+AGG - Chr4:75358489-75358508 MsG0480022672.01.T01:three_prime_UTR 10.0%
!!! GAGTAAATTTTTTTTTTATA+GGG + Chr4:75362037-75362056 None:intergenic 10.0%
!!! TATTTTTGTTGAAATATATA+AGG - Chr4:75361933-75361952 MsG0480022672.01.T01:intron 10.0%
!!! TGAGTAAATTTTTTTTTTAT+AGG + Chr4:75362038-75362057 None:intergenic 10.0%
!! AATATGTAATGAATATAAGA+AGG + Chr4:75358667-75358686 None:intergenic 15.0%
!! AATGCTATTAAAATTAAGTA+AGG - Chr4:75362423-75362442 MsG0480022672.01.T01:five_prime_UTR 15.0%
!! AATGCTATTAAAATTAAGTA+AGG + Chr4:75362442-75362423 None:intergenic 15.0%
!! AGATAAAAAGTAATAAAATC+TGG - Chr4:75362231-75362250 MsG0480022672.01.T01:CDS 15.0%
!! TTAATTAGAATCAATTATGA+AGG - Chr4:75359436-75359455 MsG0480022672.01.T01:intron 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG + Chr4:75362350-75362331 None:intergenic 15.0%
!!! AAAAAAGATTGAATTTTTTG+GGG + Chr4:75358052-75358071 None:intergenic 15.0%
!!! AAAATTTATTTTGAATGTTC+TGG - Chr4:75359285-75359304 MsG0480022672.01.T01:intron 15.0%
!!! AGAAAAAAGATTGAATTTTT+TGG + Chr4:75358054-75358073 None:intergenic 15.0%
!!! ATTTTTCTTAACTACAAAAA+TGG + Chr4:75359933-75359952 None:intergenic 15.0%
!!! ATTTTTGTAGTTAAGAAAAA+TGG - Chr4:75359932-75359951 MsG0480022672.01.T01:intron 15.0%
!!! ATTTTTTATGTTTCCAAAAT+CGG + Chr4:75361038-75361057 None:intergenic 15.0%
!!! GAAAAAAGATTGAATTTTTT+GGG + Chr4:75358053-75358072 None:intergenic 15.0%
!!! TACAGTTTTTTTGTTTTATT+TGG + Chr4:75358545-75358564 None:intergenic 15.0%
!!! TTTTAAATTTGTAACTGAAT+GGG - Chr4:75358237-75358256 MsG0480022672.01.T01:intron 15.0%
!! AAACAAATTTGAATTGAGTA+GGG - Chr4:75362361-75362380 MsG0480022672.01.T01:five_prime_UTR 20.0%
!! AACTAACCATGATTATATAT+TGG + Chr4:75362498-75362517 None:intergenic 20.0%
!! ACTAACCATGATTATATATT+GGG + Chr4:75362497-75362516 None:intergenic 20.0%
!! ATTAACCCAATATATAATCA+TGG - Chr4:75362489-75362508 MsG0480022672.01.T01:five_prime_UTR 20.0%
!! TAAACAAATTTGAATTGAGT+AGG - Chr4:75362360-75362379 MsG0480022672.01.T01:five_prime_UTR 20.0%
!!! AATTAACTTGAACTTGAAAT+TGG + Chr4:75359422-75359441 None:intergenic 20.0%
!!! AATTTTGCGATAATTTTTTG+CGG - Chr4:75362266-75362285 MsG0480022672.01.T01:CDS 20.0%
!!! ATAAAAATGATTTGTGATAC+TGG - Chr4:75360004-75360023 MsG0480022672.01.T01:intron 20.0%
!!! ATAAGTTTTTGTCAAACATA+AGG - Chr4:75359657-75359676 MsG0480022672.01.T01:intron 20.0%
!!! CATAAAAAATCGTTATTTTG+CGG - Chr4:75361048-75361067 MsG0480022672.01.T01:intron 20.0%
!!! CTTTTAAATTTGTAACTGAA+TGG - Chr4:75358236-75358255 MsG0480022672.01.T01:intron 20.0%
!!! TAAAAATGATTTGTGATACT+GGG - Chr4:75360005-75360024 MsG0480022672.01.T01:intron 20.0%
!!! TAAGTTTTTGTCAAACATAA+GGG - Chr4:75359658-75359677 MsG0480022672.01.T01:intron 20.0%
!!! TTAGTACAATATTTTATCCA+AGG - Chr4:75359120-75359139 MsG0480022672.01.T01:intron 20.0%
! AAAGCTTAACAAGCTAAAAA+TGG - Chr4:75359715-75359734 MsG0480022672.01.T01:intron 25.0%
! AAGAGAACAAAAACTACTAA+TGG - Chr4:75357886-75357905 MsG0480022672.01.T01:intron 25.0%
! AATCACTGTGATTTCATATA+TGG + Chr4:75360826-75360845 None:intergenic 25.0%
! AATCGTCACTAAACAAAATT+GGG - Chr4:75360498-75360517 MsG0480022672.01.T01:intron 25.0%
! AGAGAACAAAAACTACTAAT+GGG - Chr4:75357887-75357906 MsG0480022672.01.T01:intron 25.0%
! AGGATAATGAAGTCAATTTA+AGG - Chr4:75358807-75358826 MsG0480022672.01.T01:CDS 25.0%
! AGGGCAAAAAAACAAAATTA+GGG - Chr4:75362394-75362413 MsG0480022672.01.T01:five_prime_UTR 25.0%
! ATGCGTTACAATCTAAATTA+CGG - Chr4:75358691-75358710 MsG0480022672.01.T01:CDS 25.0%
! CTTAAGTTTGAAAATTACCT+TGG + Chr4:75359140-75359159 None:intergenic 25.0%
! GAAAATTAACTGTATTGTAG+AGG - Chr4:75358845-75358864 MsG0480022672.01.T01:CDS 25.0%
! GGACACATTTACATAAAATT+AGG - Chr4:75359342-75359361 MsG0480022672.01.T01:intron 25.0%
! GGATGATAATTAGATTTGAT+GGG - Chr4:75360699-75360718 MsG0480022672.01.T01:CDS 25.0%
! TAATGAAGTCAATTTAAGGA+TGG - Chr4:75358811-75358830 MsG0480022672.01.T01:CDS 25.0%
! TAGAAACAATTACAAGGTTT+GGG - Chr4:75361507-75361526 MsG0480022672.01.T01:intron 25.0%
! TCACTAAATCTTACAATTTG+AGG + Chr4:75360384-75360403 None:intergenic 25.0%
! TCTCATAAAAACCAAAACTA+AGG - Chr4:75360205-75360224 MsG0480022672.01.T01:intron 25.0%
! TGGATGATAATTAGATTTGA+TGG - Chr4:75360698-75360717 MsG0480022672.01.T01:CDS 25.0%
!! AAAAATGATTTGTGATACTG+GGG - Chr4:75360006-75360025 MsG0480022672.01.T01:intron 25.0%
!! AAAATCCTGTTGCTATTATT+AGG - Chr4:75360062-75360081 MsG0480022672.01.T01:intron 25.0%
!! AAGAAAACTACCATTTGTTA+TGG + Chr4:75360642-75360661 None:intergenic 25.0%
!! AAGCGATAATTTTCAATACT+CGG - Chr4:75360922-75360941 MsG0480022672.01.T01:intron 25.0%
!! ATTGATTTCCTTTGTAGTTT+AGG - Chr4:75358956-75358975 MsG0480022672.01.T01:CDS 25.0%
!! CAATTGATTTAGTGTATGTT+TGG + Chr4:75359498-75359517 None:intergenic 25.0%
!! TGTGCATCATTTTATGATTA+TGG - Chr4:75358771-75358790 MsG0480022672.01.T01:CDS 25.0%
!! TTAAGCATCTTGTATTTTCA+GGG - Chr4:75359955-75359974 MsG0480022672.01.T01:intron 25.0%
!! TTCCAATGAATTCTAAAAGA+TGG - Chr4:75358903-75358922 MsG0480022672.01.T01:CDS 25.0%
!! TTTTTGTTCTCTTCCATTTA+CGG + Chr4:75357879-75357898 None:intergenic 25.0%
!!! AACCATCTTTTAGAATTCAT+TGG + Chr4:75358908-75358927 None:intergenic 25.0%
!!! AATCAAACTTTGTTTTAGCA+GGG + Chr4:75362071-75362090 None:intergenic 25.0%
!!! CGATATAATAGTTTTAAACC+TGG - Chr4:75360452-75360471 MsG0480022672.01.T01:intron 25.0%
!!! TAATCAAACTTTGTTTTAGC+AGG + Chr4:75362072-75362091 None:intergenic 25.0%
!!! TTGATCTTGCTTGTTAATTT+TGG - Chr4:75361267-75361286 MsG0480022672.01.T01:CDS 25.0%
!!! TTGATGATTTTCTACACATT+TGG - Chr4:75361890-75361909 MsG0480022672.01.T01:intron 25.0%
!!! TTTTGTTTTTTGATTGTCGT+AGG - Chr4:75358453-75358472 MsG0480022672.01.T01:three_prime_UTR 25.0%
!!! TTTTTGGGGTAATTTTCTTT+GGG + Chr4:75358038-75358057 None:intergenic 25.0%
!!! TTTTTTGGGGTAATTTTCTT+TGG + Chr4:75358039-75358058 None:intergenic 25.0%
AAAAAGCTCAATCCAGTTAT+GGG - Chr4:75358091-75358110 MsG0480022672.01.T01:intron 30.0%
AAAATGAGCCTAAACTACAA+AGG + Chr4:75358967-75358986 None:intergenic 30.0%
AAATCCTTTCCACAATACAA+GGG + Chr4:75361560-75361579 None:intergenic 30.0%
AACACTTAAAATCGTGGTTA+AGG - Chr4:75358579-75358598 MsG0480022672.01.T01:three_prime_UTR 30.0%
AAGAAGAAGAATAAGAACAG+AGG - Chr4:75358175-75358194 MsG0480022672.01.T01:intron 30.0%
AAGTAAGGACTAAACTTACA+AGG - Chr4:75362438-75362457 MsG0480022672.01.T01:five_prime_UTR 30.0%
AAGTAAGGACTAAACTTACA+AGG + Chr4:75362457-75362438 None:intergenic 30.0%
ACTTTGTCAATTGTCATACA+AGG - Chr4:75360235-75360254 MsG0480022672.01.T01:intron 30.0%
AGAACCAATGGAGAAAAAAA+AGG + Chr4:75359531-75359550 None:intergenic 30.0%
AGCTAAAAATGGCTCTTAAA+TGG - Chr4:75359726-75359745 MsG0480022672.01.T01:intron 30.0%
ATATGAAGAGAAATGAGGAA+GGG + Chr4:75357996-75358015 None:intergenic 30.0%
ATCGCTTCACTAATATGATT+AGG + Chr4:75360909-75360928 None:intergenic 30.0%
ATGTTCTGGTATAAATGAGT+TGG - Chr4:75359299-75359318 MsG0480022672.01.T01:intron 30.0%
CAAGATTAGAACACTATGAA+AGG - Chr4:75362134-75362153 MsG0480022672.01.T01:CDS 30.0%
CAATCGTCACTAAACAAAAT+TGG - Chr4:75360497-75360516 MsG0480022672.01.T01:intron 30.0%
CAATGCTATAAGGGAATTAT+TGG - Chr4:75361451-75361470 MsG0480022672.01.T01:intron 30.0%
CAATTCAAACAAGAGCAATA+AGG - Chr4:75358141-75358160 MsG0480022672.01.T01:intron 30.0%
CAGGGCAAAAAAACAAAATT+AGG - Chr4:75362393-75362412 MsG0480022672.01.T01:five_prime_UTR 30.0%
CATAAAAACCAAAACTAAGG+TGG - Chr4:75360208-75360227 MsG0480022672.01.T01:intron 30.0%
CCTATATATGAAGAGAAATG+AGG + Chr4:75358001-75358020 None:intergenic 30.0%
CCTCATTTCTCTTCATATAT+AGG - Chr4:75357998-75358017 MsG0480022672.01.T01:intron 30.0%
CTAACCTAGAAACAATTACA+AGG - Chr4:75361501-75361520 MsG0480022672.01.T01:intron 30.0%
CTAGAAACAATTACAAGGTT+TGG - Chr4:75361506-75361525 MsG0480022672.01.T01:intron 30.0%
GCTAAAAATGGCTCTTAAAT+GGG - Chr4:75359727-75359746 MsG0480022672.01.T01:intron 30.0%
TAATATGCTAAAACGTGAAC+AGG + Chr4:75359602-75359621 None:intergenic 30.0%
TATATGAAGAGAAATGAGGA+AGG + Chr4:75357997-75358016 None:intergenic 30.0%
TATATGGTGCAATGCTATAA+GGG - Chr4:75361442-75361461 MsG0480022672.01.T01:intron 30.0%
TATTGGACCATCAAAATTTG+AGG - Chr4:75359628-75359647 MsG0480022672.01.T01:intron 30.0%
TGTGATGTTATCAAATCATC+AGG - Chr4:75360329-75360348 MsG0480022672.01.T01:CDS 30.0%
TGTTACCATTTGTTCATAAC+AGG - Chr4:75358995-75359014 MsG0480022672.01.T01:CDS 30.0%
TGTTGTCACAATTGTGTAAT+AGG - Chr4:75361201-75361220 MsG0480022672.01.T01:intron 30.0%
TTAGCATATTACAGCAGTAT+TGG - Chr4:75359611-75359630 MsG0480022672.01.T01:intron 30.0%
TTGATCATTGTTTACCTCTT+TGG - Chr4:75361582-75361601 MsG0480022672.01.T01:intron 30.0%
TTTCACCTGTTATGAACAAA+TGG + Chr4:75359003-75359022 None:intergenic 30.0%
TTTGATATTGCAATGAAACG+TGG - Chr4:75360997-75361016 MsG0480022672.01.T01:intron 30.0%
! AAAAGCCAAAACTTGTTCAT+GGG + Chr4:75358221-75358240 None:intergenic 30.0%
! AAAATGATTTGTGATACTGG+GGG - Chr4:75360007-75360026 MsG0480022672.01.T01:intron 30.0%
! AATTTTCAATACTCGGAATC+AGG - Chr4:75360929-75360948 MsG0480022672.01.T01:intron 30.0%
! AGTTTTGCATGACTTTCTTA+AGG - Chr4:75361409-75361428 MsG0480022672.01.T01:intron 30.0%
! ATTTTCAATACTCGGAATCA+GGG - Chr4:75360930-75360949 MsG0480022672.01.T01:intron 30.0%
! CAAACCTTGTAATTGTTTCT+AGG + Chr4:75361508-75361527 None:intergenic 30.0%
! GTTAAGCATCTTGTATTTTC+AGG - Chr4:75359954-75359973 MsG0480022672.01.T01:intron 30.0%
! GTTTCTAGGTTAGTATTAGA+CGG + Chr4:75361494-75361513 None:intergenic 30.0%
! TAAAAGCCAAAACTTGTTCA+TGG + Chr4:75358222-75358241 None:intergenic 30.0%
! TAAATGAGTTGGATGTAATG+TGG - Chr4:75359310-75359329 MsG0480022672.01.T01:intron 30.0%
! TAAGCATCTTGTATTTTCAG+GGG - Chr4:75359956-75359975 MsG0480022672.01.T01:intron 30.0%
! TAGGTTGAACGATAAATTTG+AGG - Chr4:75359361-75359380 MsG0480022672.01.T01:intron 30.0%
! TTCTAAAAGATGGTTGTCTA+AGG - Chr4:75358913-75358932 MsG0480022672.01.T01:CDS 30.0%
! TTGATGCTTGTTGATTGAAT+TGG - Chr4:75359164-75359183 MsG0480022672.01.T01:intron 30.0%
! TTTTTGTCAAACATAAGGGA+CGG - Chr4:75359662-75359681 MsG0480022672.01.T01:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - Chr4:75362454-75362473 MsG0480022672.01.T01:five_prime_UTR 30.0%
!! TACAAGGTCGCTATTTTATA+GGG + Chr4:75362473-75362454 None:intergenic 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - Chr4:75362453-75362472 MsG0480022672.01.T01:five_prime_UTR 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG + Chr4:75362472-75362453 None:intergenic 30.0%
!!! AAGTCCTTTTTTTTCTCCAT+TGG - Chr4:75359524-75359543 MsG0480022672.01.T01:intron 30.0%
!!! ATCTCTTGTTGATGATTTTG+GGG - Chr4:75358294-75358313 MsG0480022672.01.T01:intron 30.0%
!!! ATGTTTGGTTTCACTTTTTG+AGG + Chr4:75359483-75359502 None:intergenic 30.0%
!!! CATCTCTTGTTGATGATTTT+GGG - Chr4:75358293-75358312 MsG0480022672.01.T01:intron 30.0%
!!! TCATCTCTTGTTGATGATTT+TGG - Chr4:75358292-75358311 MsG0480022672.01.T01:intron 30.0%
AAAATCGGATGTTACTGCAT+TGG + Chr4:75361023-75361042 None:intergenic 35.0%
AACCTCCTAATAATAGCAAC+AGG + Chr4:75360070-75360089 None:intergenic 35.0%
AAGAAGAATAAGAACAGAGG+TGG - Chr4:75358178-75358197 MsG0480022672.01.T01:intron 35.0%
AAGTCAATTTAAGGATGGTG+TGG - Chr4:75358816-75358835 MsG0480022672.01.T01:CDS 35.0%
AAGTCATGCAAAACTAGTAC+TGG + Chr4:75361404-75361423 None:intergenic 35.0%
ACAACACAATGAGATGTAGT+AGG + Chr4:75361187-75361206 None:intergenic 35.0%
AGCTTGAACACTTAAAATCG+TGG - Chr4:75358573-75358592 MsG0480022672.01.T01:three_prime_UTR 35.0%
AGGCTGAAATTCAATTGTAG+AGG - Chr4:75359381-75359400 MsG0480022672.01.T01:intron 35.0%
ATAACAAGTGAAGTGATGCA+TGG - Chr4:75360425-75360444 MsG0480022672.01.T01:intron 35.0%
ATCAAAAAGATATCGGGCAA+AGG + Chr4:75359852-75359871 None:intergenic 35.0%
ATCATCCAATGTCCACAAAA+AGG + Chr4:75360686-75360705 None:intergenic 35.0%
ATCTAGCAATCAACAAGTGA+AGG + Chr4:75359909-75359928 None:intergenic 35.0%
ATGAAGTAGCGAAAGAAGAA+GGG + Chr4:75358276-75358295 None:intergenic 35.0%
ATGACTTTCTTAAGGTAGCT+AGG - Chr4:75361417-75361436 MsG0480022672.01.T01:intron 35.0%
ATTAGGAGGTTAAAAGAAGC+AGG - Chr4:75360079-75360098 MsG0480022672.01.T01:intron 35.0%
ATTGTACTAACTTCAACACC+TGG + Chr4:75359110-75359129 None:intergenic 35.0%
CAAAAAGCTCAATCCAGTTA+TGG - Chr4:75358090-75358109 MsG0480022672.01.T01:intron 35.0%
CAAATCCTTTCCACAATACA+AGG + Chr4:75361561-75361580 None:intergenic 35.0%
CAATATTACTTGGAGTAAGC+AGG + Chr4:75359881-75359900 None:intergenic 35.0%
CTATATGGTGCAATGCTATA+AGG - Chr4:75361441-75361460 MsG0480022672.01.T01:intron 35.0%
CTCTTCATATATAGGTTCAG+AGG - Chr4:75358006-75358025 MsG0480022672.01.T01:intron 35.0%
CTGTGGTTAATTGTATTCAG+AGG - Chr4:75358612-75358631 MsG0480022672.01.T01:three_prime_UTR 35.0%
CTTATAGCATTGCACCATAT+AGG + Chr4:75361443-75361462 None:intergenic 35.0%
CTTCATACAGTCTCTTTATG+TGG + Chr4:75360785-75360804 None:intergenic 35.0%
GATGGAAAATGAAGAGTTTG+AGG - Chr4:75361619-75361638 MsG0480022672.01.T01:intron 35.0%
GATGTAATGTGGTTTATGTC+TGG - Chr4:75359321-75359340 MsG0480022672.01.T01:intron 35.0%
GCACATATTTCAAAGAGTTG+TGG + Chr4:75358756-75358775 None:intergenic 35.0%
GGTTAATTGTATTCAGAGGA+TGG - Chr4:75358616-75358635 MsG0480022672.01.T01:three_prime_UTR 35.0%
GTCCACCATCAAAAAGATAT+CGG + Chr4:75359859-75359878 None:intergenic 35.0%
TAATTGTCCAAGTGCATGTT+TGG - Chr4:75359249-75359268 MsG0480022672.01.T01:intron 35.0%
TATGGCATTAAGATAATCCC+AGG - Chr4:75359089-75359108 MsG0480022672.01.T01:intron 35.0%
TCACAGCATATAGGTTTGAA+GGG - Chr4:75357922-75357941 MsG0480022672.01.T01:intron 35.0%
TCCACCATCAAAAAGATATC+GGG + Chr4:75359858-75359877 None:intergenic 35.0%
TCTGTGTGTTCCATAACAAA+TGG - Chr4:75360629-75360648 MsG0480022672.01.T01:CDS 35.0%
TGTTCGTTTATGACTAGACA+TGG + Chr4:75361125-75361144 None:intergenic 35.0%
TTATCTTCGAGCAAAGAACA+TGG - Chr4:75359688-75359707 MsG0480022672.01.T01:intron 35.0%
TTCTAAGTCTCTATGAGAAC+CGG + Chr4:75361692-75361711 None:intergenic 35.0%
TTGTACTAACTTCAACACCT+GGG + Chr4:75359109-75359128 None:intergenic 35.0%
! AAGTAGATCCACCTTAGTTT+TGG + Chr4:75360219-75360238 None:intergenic 35.0%
! AATGCAGTAACATCCGATTT+TGG - Chr4:75361022-75361041 MsG0480022672.01.T01:intron 35.0%
! ACTCTTCATTTTCCATCTCT+TGG + Chr4:75361616-75361635 None:intergenic 35.0%
! ATCCTGTTGCTATTATTAGG+AGG - Chr4:75360065-75360084 MsG0480022672.01.T01:intron 35.0%
! GGTTATTACGTAAGTGTTGT+GGG + Chr4:75360587-75360606 None:intergenic 35.0%
! GTTAAGGACGTTTAAAACTG+TGG - Chr4:75358595-75358614 MsG0480022672.01.T01:three_prime_UTR 35.0%
! TAATGACTTGTGCATTCACT+TGG + Chr4:75360608-75360627 None:intergenic 35.0%
! TGGTTATTACGTAAGTGTTG+TGG + Chr4:75360588-75360607 None:intergenic 35.0%
! TGTAACTGAATGGGTTTCAT+TGG - Chr4:75358246-75358265 MsG0480022672.01.T01:intron 35.0%
! TGTTGATTGAATTGGCACTT+TGG - Chr4:75359172-75359191 MsG0480022672.01.T01:intron 35.0%
! TTAAATGGGAGCATGTTTGT+AGG - Chr4:75359741-75359760 MsG0480022672.01.T01:intron 35.0%
! TTTGCCCGATATCTTTTTGA+TGG - Chr4:75359851-75359870 MsG0480022672.01.T01:intron 35.0%
!! TAAGCTGTTTTGTCATTTCC+AGG + Chr4:75360473-75360492 None:intergenic 35.0%
!! TCTAGCTCCTCAAATTTTGA+TGG + Chr4:75359638-75359657 None:intergenic 35.0%
!!! ACAGGATTTTTTAATGCCCA+TGG + Chr4:75360052-75360071 None:intergenic 35.0%
!!! TCCATCTCCACTTATTTTAG+AGG + Chr4:75358871-75358890 None:intergenic 35.0%
!!! TCGGAATCAGGGTTTTAAAT+GGG - Chr4:75360941-75360960 MsG0480022672.01.T01:intron 35.0%
!!! TTTGCGATAATTTTTTGCGG+AGG - Chr4:75362269-75362288 MsG0480022672.01.T01:exon 35.0%
!!! TTTGGTTTCACTTTTTGAGG+AGG + Chr4:75359480-75359499 None:intergenic 35.0%
AAAACTTACGCCGTTCATGT+GGG + Chr4:75358425-75358444 None:intergenic 40.0%
AAAGAGACTGTATGAAGCCT+AGG - Chr4:75360788-75360807 MsG0480022672.01.T01:CDS 40.0%
AACGTTGGAAAGCTTCAACT+TGG + Chr4:75361648-75361667 None:intergenic 40.0%
ATCATGGGATGAATAGCAGA+TGG + Chr4:75360872-75360891 None:intergenic 40.0%
ATCCAATGTCCACAAAAAGG+TGG + Chr4:75360683-75360702 None:intergenic 40.0%
ATGGAGGTCTACAAAAGTGA+TGG - Chr4:75360112-75360131 MsG0480022672.01.T01:intron 40.0%
CAGAAGCCTGTTGGAAAAAA+TGG - Chr4:75358319-75358338 MsG0480022672.01.T01:intron 40.0%
CTGCTATTCATCCCATGATA+TGG - Chr4:75360873-75360892 MsG0480022672.01.T01:intron 40.0%
GAAGGCAACGCAATATTACT+TGG + Chr4:75359891-75359910 None:intergenic 40.0%
GAGATGTAGTAGGCAGTATT+CGG + Chr4:75361177-75361196 None:intergenic 40.0%
GATGAAGTAGCGAAAGAAGA+AGG + Chr4:75358277-75358296 None:intergenic 40.0%
GCATATAGGTTTGAAGGGTT+AGG - Chr4:75357927-75357946 MsG0480022672.01.T01:intron 40.0%
GTCACAGCATATAGGTTTGA+AGG - Chr4:75357921-75357940 MsG0480022672.01.T01:intron 40.0%
GTCTCTTTATGTGGATCAGA+AGG + Chr4:75360776-75360795 None:intergenic 40.0%
GTGAACCTCCCTTAAAAATG+CGG + Chr4:75361538-75361557 None:intergenic 40.0%
GTTAGTATTAGACGGTTCCT+CGG + Chr4:75361486-75361505 None:intergenic 40.0%
TAAAACTTACGCCGTTCATG+TGG + Chr4:75358426-75358445 None:intergenic 40.0%
TAAAAGAAGCAGGCCTTCAT+GGG - Chr4:75360089-75360108 MsG0480022672.01.T01:intron 40.0%
TCAAACCTATATGCTGTGAC+AGG + Chr4:75357921-75357940 None:intergenic 40.0%
TCCAATGTCCACAAAAAGGT+GGG + Chr4:75360682-75360701 None:intergenic 40.0%
TCTGACAGATCACGATACTA+TGG - Chr4:75359031-75359050 MsG0480022672.01.T01:CDS 40.0%
TCTTGGCTACTTAACCAAAG+AGG + Chr4:75361599-75361618 None:intergenic 40.0%
TGAACCTCCCTTAAAAATGC+GGG + Chr4:75361537-75361556 None:intergenic 40.0%
TGAGTAGGGACTAATACTCA+GGG - Chr4:75362375-75362394 MsG0480022672.01.T01:five_prime_UTR 40.0%
TGTAGAACCAAACATGCACT+TGG + Chr4:75359259-75359278 None:intergenic 40.0%
TGTCACTCTAAATGCAGTGA+TGG - Chr4:75358367-75358386 MsG0480022672.01.T01:intron 40.0%
TTAAAAGAAGCAGGCCTTCA+TGG - Chr4:75360088-75360107 MsG0480022672.01.T01:intron 40.0%
TTAAGGTAGCTAGGCCTATA+TGG - Chr4:75361426-75361445 MsG0480022672.01.T01:intron 40.0%
TTCACCCTTGTATTGTGGAA+AGG - Chr4:75361553-75361572 MsG0480022672.01.T01:intron 40.0%
TTGAGTAGGGACTAATACTC+AGG - Chr4:75362374-75362393 MsG0480022672.01.T01:five_prime_UTR 40.0%
TTGGTTAAGTAGCCAAGAGA+TGG - Chr4:75361601-75361620 MsG0480022672.01.T01:intron 40.0%
! AGGTCTACAAAAGTGATGGA+AGG - Chr4:75360116-75360135 MsG0480022672.01.T01:intron 40.0%
! ATTATTGGAGTGTTATGCCG+AGG - Chr4:75361466-75361485 MsG0480022672.01.T01:intron 40.0%
! ATTGAGCTTTTTGCCTGAAG+CGG + Chr4:75358083-75358102 None:intergenic 40.0%
! CATGCAAAACTAGTACTGGA+AGG + Chr4:75361400-75361419 None:intergenic 40.0%
! CTGACCCTCCAATTTTCAAA+AGG + Chr4:75361328-75361347 None:intergenic 40.0%
! GATGACCCATGAACAAGTTT+TGG - Chr4:75358213-75358232 MsG0480022672.01.T01:intron 40.0%
! TCCAATTTTCAAAAGGCCGT+AGG + Chr4:75361321-75361340 None:intergenic 40.0%
! TGGCTTTTTGTCTCCTTCTA+AGG - Chr4:75358387-75358406 MsG0480022672.01.T01:intron 40.0%
!! AAGTGCATGTTTGGTTCTAC+AGG - Chr4:75359258-75359277 MsG0480022672.01.T01:intron 40.0%
!! ACGGCCTTTTGAAAATTGGA+GGG - Chr4:75361321-75361340 MsG0480022672.01.T01:CDS 40.0%
!! AGTGCATGTTTGGTTCTACA+GGG - Chr4:75359259-75359278 MsG0480022672.01.T01:intron 40.0%
!! GCAAGAAGCATCCATATCAT+GGG + Chr4:75360887-75360906 None:intergenic 40.0%
!! GCCTCTAAAATAAGTGGAGA+TGG - Chr4:75358867-75358886 MsG0480022672.01.T01:CDS 40.0%
!! GTAGAGGCCTCTAAAATAAG+TGG - Chr4:75358861-75358880 MsG0480022672.01.T01:CDS 40.0%
!! TACGGCCTTTTGAAAATTGG+AGG - Chr4:75361320-75361339 MsG0480022672.01.T01:CDS 40.0%
!!! CGGAATCAGGGTTTTAAATG+GGG - Chr4:75360942-75360961 MsG0480022672.01.T01:intron 40.0%
!!! CTCGGAATCAGGGTTTTAAA+TGG - Chr4:75360940-75360959 MsG0480022672.01.T01:intron 40.0%
!!! CTGTCACCATTTTTTCCAAC+AGG + Chr4:75358328-75358347 None:intergenic 40.0%
!!! GGAATCAGGGTTTTAAATGG+GGG - Chr4:75360943-75360962 MsG0480022672.01.T01:intron 40.0%
AACCTATATGCTGTGACAGG+TGG + Chr4:75357918-75357937 None:intergenic 45.0%
AACCTGCTTCAACCATAGCA+CGG + Chr4:75359808-75359827 None:intergenic 45.0%
AAGGGTAGGTTACCCTTACA+GGG + Chr4:75357978-75357997 None:intergenic 45.0%
ACAGATCACGATACTATGGC+AGG - Chr4:75359035-75359054 MsG0480022672.01.T01:CDS 45.0%
ACCTATATGCTGTGACAGGT+GGG + Chr4:75357917-75357936 None:intergenic 45.0%
AGGACACCATGAATCTGAAC+TGG - Chr4:75361364-75361383 MsG0480022672.01.T01:intron 45.0%
ATTGGAGGGTCAGACTATCA+TGG - Chr4:75361335-75361354 MsG0480022672.01.T01:CDS 45.0%
CAAAGATCCCTTCCCTGTAA+GGG - Chr4:75357963-75357982 MsG0480022672.01.T01:intron 45.0%
CACTTCCCAGTTCAGATTCA+TGG + Chr4:75361373-75361392 None:intergenic 45.0%
CCAATGTCCACAAAAAGGTG+GGG + Chr4:75360681-75360700 None:intergenic 45.0%
CTCAATCCAGTTATGGGAGA+TGG - Chr4:75358097-75358116 MsG0480022672.01.T01:intron 45.0%
CTTGTGTTGCCTCTAACTAG+AGG - Chr4:75359199-75359218 MsG0480022672.01.T01:intron 45.0%
GAAGAGAAATGAGGAAGGGT+AGG + Chr4:75357992-75358011 None:intergenic 45.0%
GAGCATGTTTGTAGGATTGC+AGG - Chr4:75359749-75359768 MsG0480022672.01.T01:intron 45.0%
GCTCTCTCAACAACCTTAGA+AGG + Chr4:75358403-75358422 None:intergenic 45.0%
GGACACCATGAATCTGAACT+GGG - Chr4:75361365-75361384 MsG0480022672.01.T01:intron 45.0%
GTATGCAGCATATAGTGACC+TGG - Chr4:75361289-75361308 MsG0480022672.01.T01:CDS 45.0%
GTTTGTAGGATTGCAGGCAA+CGG - Chr4:75359755-75359774 MsG0480022672.01.T01:intron 45.0%
TAGGTTACCCTTACAGGGAA+GGG + Chr4:75357973-75357992 None:intergenic 45.0%
TATGGTCAACCACTAAGCCT+AGG + Chr4:75360808-75360827 None:intergenic 45.0%
TCAGACTATCATGGAAGAGG+AGG - Chr4:75361344-75361363 MsG0480022672.01.T01:CDS 45.0%
TCCAACGTTTCTACCAGTCA+GGG - Chr4:75361659-75361678 MsG0480022672.01.T01:intron 45.0%
TCTGATGTTTGCCCATCTAC+TGG - Chr4:75359548-75359567 MsG0480022672.01.T01:intron 45.0%
TGGGCAAACATCAGAACCAA+TGG + Chr4:75359543-75359562 None:intergenic 45.0%
TGTATGAAGCCTAGGCTTAG+TGG - Chr4:75360796-75360815 MsG0480022672.01.T01:CDS 45.0%
TGTTGCCTCTAACTAGAGGA+GGG - Chr4:75359203-75359222 MsG0480022672.01.T01:intron 45.0%
TTCCAACGTTTCTACCAGTC+AGG - Chr4:75361658-75361677 MsG0480022672.01.T01:intron 45.0%
TTTAAGGATGGTGTGGCTGA+TGG - Chr4:75358823-75358842 MsG0480022672.01.T01:CDS 45.0%
TTTATTGCTTCCTCCACCAC+AGG + Chr4:75359989-75360008 None:intergenic 45.0%
! AAAAGTGATGGAAGGCTTGC+AGG - Chr4:75360124-75360143 MsG0480022672.01.T01:intron 45.0%
! GCCCGATATCTTTTTGATGG+TGG - Chr4:75359854-75359873 MsG0480022672.01.T01:intron 45.0%
! GGGAGAACCCGCATTTTTAA+GGG - Chr4:75361527-75361546 MsG0480022672.01.T01:intron 45.0%
! TGGGAGAACCCGCATTTTTA+AGG - Chr4:75361526-75361545 MsG0480022672.01.T01:intron 45.0%
! TTTTTCTTCTCCACCGCTTC+AGG - Chr4:75358067-75358086 MsG0480022672.01.T01:intron 45.0%
!! AGAACCCGCATTTTTAAGGG+AGG - Chr4:75361530-75361549 MsG0480022672.01.T01:intron 45.0%
!! ATGGTTAGCCTCTATCTCAC+CGG + Chr4:75361106-75361125 None:intergenic 45.0%
!! GCCTACGGCCTTTTGAAAAT+TGG - Chr4:75361317-75361336 MsG0480022672.01.T01:CDS 45.0%
!! GGCAAGAAGCATCCATATCA+TGG + Chr4:75360888-75360907 None:intergenic 45.0%
!! GTAGAATCGGCTCGCAAATA+TGG - Chr4:75359071-75359090 MsG0480022672.01.T01:CDS 45.0%
AACGTTTCTACCAGTCAGGG+AGG - Chr4:75361662-75361681 MsG0480022672.01.T01:intron 50.0%
ACCCACCTGTCACAGCATAT+AGG - Chr4:75357913-75357932 MsG0480022672.01.T01:intron 50.0%
ACCTGCTTCAACCATAGCAC+GGG + Chr4:75359807-75359826 None:intergenic 50.0%
ACTCATCACTACCGCCAACT+TGG - Chr4:75361075-75361094 MsG0480022672.01.T01:intron 50.0%
CCAAAGATCCCTTCCCTGTA+AGG - Chr4:75357962-75357981 MsG0480022672.01.T01:intron 50.0%
CCTTACAGGGAAGGGATCTT+TGG + Chr4:75357965-75357984 None:intergenic 50.0%
CTCATCACTACCGCCAACTT+GGG - Chr4:75361076-75361095 MsG0480022672.01.T01:intron 50.0%
GAAGGGTAGGTTACCCTTAC+AGG + Chr4:75357979-75357998 None:intergenic 50.0%
GCGATACCATCTCCCATAAC+TGG + Chr4:75358106-75358125 None:intergenic 50.0%
GGAGGTTCACCCTTGTATTG+TGG - Chr4:75361548-75361567 MsG0480022672.01.T01:intron 50.0%
GGGTCAGACTATCATGGAAG+AGG - Chr4:75361341-75361360 MsG0480022672.01.T01:CDS 50.0%
GTAGGTTACCCTTACAGGGA+AGG + Chr4:75357974-75357993 None:intergenic 50.0%
GTGTTGCCTCTAACTAGAGG+AGG - Chr4:75359202-75359221 MsG0480022672.01.T01:intron 50.0%
GTTGAGAGAGCCCACATGAA+CGG - Chr4:75358412-75358431 MsG0480022672.01.T01:intron 50.0%
GTTGCCTCTAACTAGAGGAG+GGG - Chr4:75359204-75359223 MsG0480022672.01.T01:intron 50.0%
TCCCTGACTGGTAGAAACGT+TGG + Chr4:75361663-75361682 None:intergenic 50.0%
TGTAGACCTCCATCCCATGA+AGG + Chr4:75360105-75360124 None:intergenic 50.0%
TTGCCTCTAACTAGAGGAGG+GGG - Chr4:75359205-75359224 MsG0480022672.01.T01:intron 50.0%
TTTCAGGGGAAGTGAACCTG+TGG - Chr4:75359970-75359989 MsG0480022672.01.T01:intron 50.0%
! CCCCACCTTTTTGTGGACAT+TGG - Chr4:75360678-75360697 MsG0480022672.01.T01:CDS 50.0%
! TGCACTACCCCACCTTTTTG+TGG - Chr4:75360671-75360690 MsG0480022672.01.T01:CDS 50.0%
!! GAAGGGATCTTTGGAGTCAC+AGG + Chr4:75357956-75357975 None:intergenic 50.0%
AGAAGCAGGCCTTCATGGGA+TGG - Chr4:75360093-75360112 MsG0480022672.01.T01:intron 55.0%
AGTGACCTGGCTGATGCCTA+CGG - Chr4:75361302-75361321 MsG0480022672.01.T01:CDS 55.0%
CATCCCCGAGGCTGTAGAAT+CGG - Chr4:75359058-75359077 MsG0480022672.01.T01:CDS 55.0%
CTCCACCACTGCCAGTAGAT+GGG + Chr4:75359562-75359581 None:intergenic 55.0%
GTTTGCCCATCTACTGGCAG+TGG - Chr4:75359554-75359573 MsG0480022672.01.T01:intron 55.0%
TACCAGTCAGGGAGGAACTC+CGG - Chr4:75361670-75361689 MsG0480022672.01.T01:intron 55.0%
TCTCCACCACTGCCAGTAGA+TGG + Chr4:75359563-75359582 None:intergenic 55.0%
TGCCCATGGATGAGCCAGAA+CGG + Chr4:75360038-75360057 None:intergenic 55.0%
TGCCTCTAACTAGAGGAGGG+GGG - Chr4:75359206-75359225 MsG0480022672.01.T01:intron 55.0%
TGGTGGAGACACTGAAGCAG+AGG - Chr4:75359574-75359593 MsG0480022672.01.T01:intron 55.0%
TTCCCCCCTCCTCTAGTTAG+AGG + Chr4:75359211-75359230 None:intergenic 55.0%
! CAACCATAGCACGGGCTACA+TGG + Chr4:75359799-75359818 None:intergenic 55.0%
! GAGCTTTTTGCCTGAAGCGG+TGG + Chr4:75358080-75358099 None:intergenic 55.0%
! TTTGGGGTGCAGAAGCCTGT+TGG - Chr4:75358310-75358329 MsG0480022672.01.T01:intron 55.0%
!! TGCCGTTCTGGCTCATCCAT+GGG - Chr4:75360033-75360052 MsG0480022672.01.T01:intron 55.0%
!! TTGCCGTTCTGGCTCATCCA+TGG - Chr4:75360032-75360051 MsG0480022672.01.T01:intron 55.0%
AAAGGCCGTAGGCATCAGCC+AGG + Chr4:75361310-75361329 None:intergenic 60.0%
AACCGGAGTTCCTCCCTGAC+TGG + Chr4:75361675-75361694 None:intergenic 60.0%
AGCAGGCCTTCATGGGATGG+AGG - Chr4:75360096-75360115 MsG0480022672.01.T01:intron 60.0%
CAGGGGAAGTGAACCTGTGG+TGG - Chr4:75359973-75359992 MsG0480022672.01.T01:intron 60.0%
GCCCGTGCTATGGTTGAAGC+AGG - Chr4:75359803-75359822 MsG0480022672.01.T01:intron 60.0%
GCTCCATGTAGCCCGTGCTA+TGG - Chr4:75359793-75359812 MsG0480022672.01.T01:intron 60.0%
GGGAAGTGAACCTGTGGTGG+AGG - Chr4:75359976-75359995 MsG0480022672.01.T01:intron 60.0%
TACTATGGCAGGCATCCCCG+AGG - Chr4:75359046-75359065 MsG0480022672.01.T01:CDS 60.0%
TGCCCATCTACTGGCAGTGG+TGG - Chr4:75359557-75359576 MsG0480022672.01.T01:intron 60.0%
! ACGGGCTACATGGAGCCTTC+CGG + Chr4:75359789-75359808 None:intergenic 60.0%
! CGAGCCGATTCTACAGCCTC+GGG + Chr4:75359065-75359084 None:intergenic 60.0%
! GAGCCGATTCTACAGCCTCG+GGG + Chr4:75359064-75359083 None:intergenic 60.0%
! GCGAGCCGATTCTACAGCCT+CGG + Chr4:75359066-75359085 None:intergenic 60.0%
! TCTCACCGGCTAGCCCAAGT+TGG + Chr4:75361092-75361111 None:intergenic 60.0%
!! TACCGCCAACTTGGGCTAGC+CGG - Chr4:75361084-75361103 MsG0480022672.01.T01:intron 60.0%
!! TACTGGGGGTGTTGCCGTTC+TGG - Chr4:75360021-75360040 MsG0480022672.01.T01:intron 60.0%
!! TGGGCTAGCCGGTGAGATAG+AGG - Chr4:75361095-75361114 MsG0480022672.01.T01:intron 60.0%
CGGGCTACATGGAGCCTTCC+GGG + Chr4:75359788-75359807 None:intergenic 65.0%
GCAACGGAGTTGCTCCCGGA+AGG - Chr4:75359771-75359790 MsG0480022672.01.T01:intron 65.0%
GCAGGCAACGGAGTTGCTCC+CGG - Chr4:75359767-75359786 MsG0480022672.01.T01:intron 65.0%
! CACCGGCTAGCCCAAGTTGG+CGG + Chr4:75361089-75361108 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 75357871 75362524 75357871 ID=MsG0480022672.01;Name=MsG0480022672.01
Chr4 mRNA 75357871 75362524 75357871 ID=MsG0480022672.01.T01;Parent=MsG0480022672.01;Name=MsG0480022672.01.T01;_AED=0.31;_eAED=0.31;_QI=238|1|1|1|0.8|0.66|6|263|450
Chr4 exon 75357871 75357893 75357871 ID=MsG0480022672.01.T01:exon:3227;Parent=MsG0480022672.01.T01
Chr4 exon 75358446 75359098 75358446 ID=MsG0480022672.01.T01:exon:3226;Parent=MsG0480022672.01.T01
Chr4 exon 75360250 75360419 75360250 ID=MsG0480022672.01.T01:exon:3225;Parent=MsG0480022672.01.T01
Chr4 exon 75360504 75360821 75360504 ID=MsG0480022672.01.T01:exon:3224;Parent=MsG0480022672.01.T01
Chr4 exon 75361254 75361378 75361254 ID=MsG0480022672.01.T01:exon:3223;Parent=MsG0480022672.01.T01
Chr4 exon 75361960 75362524 75361960 ID=MsG0480022672.01.T01:exon:3222;Parent=MsG0480022672.01.T01
Chr4 five_prime_UTR 75362287 75362524 75362287 ID=MsG0480022672.01.T01:five_prime_utr;Parent=MsG0480022672.01.T01
Chr4 CDS 75361960 75362286 75361960 ID=MsG0480022672.01.T01:cds;Parent=MsG0480022672.01.T01
Chr4 CDS 75361254 75361378 75361254 ID=MsG0480022672.01.T01:cds;Parent=MsG0480022672.01.T01
Chr4 CDS 75360504 75360821 75360504 ID=MsG0480022672.01.T01:cds;Parent=MsG0480022672.01.T01
Chr4 CDS 75360250 75360419 75360250 ID=MsG0480022672.01.T01:cds;Parent=MsG0480022672.01.T01
Chr4 CDS 75358686 75359098 75358686 ID=MsG0480022672.01.T01:cds;Parent=MsG0480022672.01.T01
Chr4 three_prime_UTR 75358446 75358685 75358446 ID=MsG0480022672.01.T01:three_prime_utr;Parent=MsG0480022672.01.T01
Chr4 three_prime_UTR 75357871 75357893 75357871 ID=MsG0480022672.01.T01:three_prime_utr;Parent=MsG0480022672.01.T01
Gene Sequence

>MsG0480022672.01.T01

ATGGGAGATGGTATCGCAATTCAAAGCACAAACAATTCAAACAAGAGCAATAAGGATAAGAAAAAGAAGAAGAAGAATAAGAACAGAGGTGGAAGCAAGAAGAAGATGACCCATGAACAAGTTTTGGCTTTTAAATTTGTAACTGAATGGGTTTCATTGGATAACCCTTCTTCTTTCGCTACTTCATCTCTTGTTGATGATTTTGGGGTGCAGAAGCCTGTTGGAAAAAATGGTGACAGAGTTGTGTTTGATTTGCACTGTCACTCTAAATGCAGTGATGGCTTTTTGTCTCCTTCTAAGGTTGTTGAGAGAGCCCACATGAACGGCGTGAAAGTTCTTGCTCTGACAGATCACGATACTATGGCAGGCATCCCCGAGGCTGTAGAATCGGCTCGCAAATATGGCATTAAGATAATCCCAGGTGTTGAAGTTAGTACAATATTTTATCCAAGTGGTGGAGACACTGAAGCAGAGGAACCTGTTCACGTTTTAGCATATTACAGCAGTATTGGACCATCAAAATTTGAGGAGCTAGATAAGTTTTTGTCAAACATAAGGGACGGACGTTATCTTCGAGCAAAGAACATGGTCTTAAAGCTTAACAAGCTAAAAATGGCTCTTAAATGGGAGCATGTTTGTAGGATTGCAGGCAACGGAGTTGCTCCCGGAAGGCTCCATGTAGCCCGTGCTATGGTTGAAGCAGGTTATGTTGAAAATCTCAAACAAGCCTTTGCCCGATATCTTTTTGATGGTGGACCTGCTTACTCCAAGGGAAGTGAACCTGTGGTGGAGGAAGCAATAAAAATGATTTGTGATACTGGGGGTGTTGCCGTTCTGGCTCATCCATGGGCATTAAAAAATCCTGTTGCTATTATTAGGAGGTTAAAAGAAGCAGGCCTTCATGGGATGGAGGTCTACAAAAGTGATGGAAGGCTTGCAGCATATAGTGACCTGGCTGATGCCTACGGCCTTTTGAAAATTGGAGGGTCAGACTATCATGGAAGAGGAGGACACCATGAATCTGAACTGGGAAGTGTAAACCTTCCAGTACTAGTTTTGCATGACTTTCTTAAGGTAGCTAGGCCTATATGGTGCAATGCTATAAGGGAATTATTGGAGTGTTATGCCGAGGAACCGTCTAATACTAACCTAGAAACAATTACAAGGTTTGGGAGAACCCGCATTTTTAAGGGAGGTTCACCCTTGTATTGTGGAAAGGATTTGATTGATCATTGTTTACCTCTTTGGTTAAGTAGCCAAGAGATGGAAAATGAAGAGTTTGAGGCTACCAAGTTGAAGCTTTCCAACGTTTCTACCAGTCAGGGAGGAACTCCGGTTCTCATAGAGACTTAG

Protein sequence

>MsG0480022672.01.T01

MGDGIAIQSTNNSNKSNKDKKKKKKNKNRGGSKKKMTHEQVLAFKFVTEWVSLDNPSSFATSSLVDDFGVQKPVGKNGDRVVFDLHCHSKCSDGFLSPSKVVERAHMNGVKVLALTDHDTMAGIPEAVESARKYGIKIIPGVEVSTIFYPSGGDTEAEEPVHVLAYYSSIGPSKFEELDKFLSNIRDGRYLRAKNMVLKLNKLKMALKWEHVCRIAGNGVAPGRLHVARAMVEAGYVENLKQAFARYLFDGGPAYSKGSEPVVEEAIKMICDTGGVAVLAHPWALKNPVAIIRRLKEAGLHGMEVYKSDGRLAAYSDLADAYGLLKIGGSDYHGRGGHHESELGSVNLPVLVLHDFLKVARPIWCNAIRELLECYAEEPSNTNLETITRFGRTRIFKGGSPLYCGKDLIDHCLPLWLSSQEMENEEFEATKLKLSNVSTSQGGTPVLIET*