Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005913.01.T01 | XP_013470130.1 | 81.569 | 255 | 8 | 2 | 1 | 255 | 1 | 216 | 6.62E-131 | 379 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005913.01.T01 | G8A288 | 81.569 | 255 | 8 | 2 | 1 | 255 | 1 | 216 | 3.16e-131 | 379 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047791.01 | MsG0180005913.01 | 0.832774 | 7.800822e-56 | 8.807174e-53 |
| MsG0080048152.01 | MsG0180005913.01 | 0.805050 | 1.609214e-49 | 8.429280e-47 |
| MsG0080049011.01 | MsG0180005913.01 | 0.846811 | 1.717822e-59 | 2.992575e-56 |
| MsG0180000026.01 | MsG0180005913.01 | 0.801543 | 8.568576e-49 | 4.102877e-46 |
| MsG0180000355.01 | MsG0180005913.01 | 0.840650 | 7.653636e-58 | 1.097325e-54 |
| MsG0180000482.01 | MsG0180005913.01 | 0.800055 | 1.724869e-48 | 7.953679e-46 |
| MsG0180000568.01 | MsG0180005913.01 | 0.829550 | 4.833600e-55 | 4.963063e-52 |
| MsG0180000611.01 | MsG0180005913.01 | 0.800751 | 1.244021e-48 | 5.838596e-46 |
| MsG0180001118.01 | MsG0180005913.01 | 0.809180 | 2.148930e-50 | 1.253080e-47 |
| MsG0180001886.01 | MsG0180005913.01 | 0.813652 | 2.296210e-51 | 1.508313e-48 |
| MsG0180002547.01 | MsG0180005913.01 | 0.802380 | 5.766944e-49 | 2.820898e-46 |
| MsG0180003357.01 | MsG0180005913.01 | 0.827920 | 1.198093e-54 | 1.172989e-51 |
| MsG0180003697.01 | MsG0180005913.01 | 0.800961 | 1.127333e-48 | 5.319581e-46 |
| MsG0180003821.01 | MsG0180005913.01 | 0.843378 | 1.454095e-58 | 2.270956e-55 |
| MsG0180004398.01 | MsG0180005913.01 | 0.814090 | 1.838672e-51 | 1.222113e-48 |
| MsG0180004493.01 | MsG0180005913.01 | 0.814040 | 1.886339e-51 | 1.252144e-48 |
| MsG0180004725.01 | MsG0180005913.01 | 0.817114 | 3.899743e-52 | 2.814862e-49 |
| MsG0180004750.01 | MsG0180005913.01 | 0.807851 | 4.130838e-50 | 2.325582e-47 |
| MsG0180005169.01 | MsG0180005913.01 | 0.808217 | 3.451254e-50 | 1.961995e-47 |
| MsG0180005240.01 | MsG0180005913.01 | 0.818356 | 2.045715e-52 | 1.527924e-49 |
| MsG0180005268.01 | MsG0180005913.01 | 0.848018 | 8.008709e-60 | 1.449778e-56 |
| MsG0180005303.01 | MsG0180005913.01 | -0.815419 | 9.334831e-52 | 6.432469e-49 |
| MsG0180005334.01 | MsG0180005913.01 | 0.805821 | 1.109476e-49 | 5.927867e-47 |
| MsG0180005382.01 | MsG0180005913.01 | 0.806675 | 7.331292e-50 | 4.003240e-47 |
| MsG0180005509.01 | MsG0180005913.01 | 0.828040 | 1.121277e-54 | 1.101715e-51 |
| MsG0180005787.01 | MsG0180005913.01 | 0.848398 | 6.287666e-60 | 1.152385e-56 |
| MsG0180005913.01 | MsG0180006046.01 | 0.811241 | 7.723734e-51 | 4.756232e-48 |
| MsG0180005913.01 | MsG0180006096.01 | 0.835674 | 1.462676e-56 | 1.801341e-53 |
| MsG0180005913.01 | MsG0180006104.01 | 0.820454 | 6.800086e-53 | 5.383191e-50 |
| MsG0180005913.01 | MsG0280006306.01 | -0.842766 | 2.116534e-58 | 3.241826e-55 |
| MsG0180005913.01 | MsG0280006461.01 | 0.808230 | 3.429992e-50 | 1.950527e-47 |
| MsG0180005913.01 | MsG0280006634.01 | 0.803678 | 3.107966e-49 | 1.571447e-46 |
| MsG0180005913.01 | MsG0280006852.01 | 0.831092 | 2.030782e-55 | 2.181231e-52 |
| MsG0180005913.01 | MsG0280007062.01 | 0.803463 | 3.444615e-49 | 1.732129e-46 |
| MsG0180005913.01 | MsG0280007165.01 | -0.818334 | 2.069765e-52 | 1.544880e-49 |
| MsG0180005913.01 | MsG0280007441.01 | 0.803379 | 3.586154e-49 | 1.799313e-46 |
| MsG0180005913.01 | MsG0280007847.01 | 0.826698 | 2.352474e-54 | 2.222548e-51 |
| MsG0180005913.01 | MsG0280007903.01 | 0.826701 | 2.347648e-54 | 2.218235e-51 |
| MsG0180005913.01 | MsG0280008429.01 | 0.842758 | 2.126989e-58 | 3.256995e-55 |
| MsG0180005913.01 | MsG0280008928.01 | 0.826675 | 2.382021e-54 | 2.249000e-51 |
| MsG0180005913.01 | MsG0280008929.01 | 0.843182 | 1.639323e-58 | 2.543998e-55 |
| MsG0180005913.01 | MsG0280009353.01 | 0.800609 | 1.330024e-48 | 6.219846e-46 |
| MsG0180005913.01 | MsG0280009575.01 | 0.815374 | 9.554136e-52 | 6.575490e-49 |
| MsG0180005913.01 | MsG0280009685.01 | 0.838809 | 2.305690e-57 | 3.123386e-54 |
| MsG0180005913.01 | MsG0280010013.01 | 0.825412 | 4.753214e-54 | 4.329152e-51 |
| MsG0180005913.01 | MsG0280010205.01 | 0.816807 | 4.571226e-52 | 3.271894e-49 |
| MsG0180005913.01 | MsG0280010288.01 | 0.804463 | 2.134384e-49 | 1.101178e-46 |
| MsG0180005913.01 | MsG0280010411.01 | 0.818207 | 2.210497e-52 | 1.644107e-49 |
| MsG0180005913.01 | MsG0280010753.01 | 0.807593 | 4.687018e-50 | 2.620938e-47 |
| MsG0180005913.01 | MsG0280010776.01 | 0.823255 | 1.528319e-53 | 1.309111e-50 |
| MsG0180005913.01 | MsG0280011073.01 | 0.818268 | 2.141941e-52 | 1.595736e-49 |
| MsG0180005913.01 | MsG0280011109.01 | 0.810939 | 8.981337e-51 | 5.487224e-48 |
| MsG0180005913.01 | MsG0280011371.01 | 0.850460 | 1.674456e-60 | 3.282254e-57 |
| MsG0180005913.01 | MsG0280011387.01 | 0.800204 | 1.608641e-48 | 7.445655e-46 |
| MsG0180005913.01 | MsG0380011614.01 | 0.818691 | 1.717468e-52 | 1.294550e-49 |
| MsG0180005913.01 | MsG0380011669.01 | 0.807545 | 4.797188e-50 | 2.679364e-47 |
| MsG0180005913.01 | MsG0380011704.01 | 0.856097 | 4.050083e-62 | 9.557616e-59 |
| MsG0180005913.01 | MsG0380011747.01 | 0.821169 | 4.657043e-53 | 3.760561e-50 |
| MsG0180005913.01 | MsG0380012374.01 | 0.807229 | 5.596578e-50 | 3.100369e-47 |
| MsG0180005913.01 | MsG0380012394.01 | 0.801773 | 7.688299e-49 | 3.702743e-46 |
| MsG0180005913.01 | MsG0380012570.01 | 0.825837 | 3.769133e-54 | 3.474962e-51 |
| MsG0180005913.01 | MsG0380013085.01 | 0.825202 | 5.329168e-54 | 4.825136e-51 |
| MsG0180005913.01 | MsG0380014175.01 | 0.808315 | 3.289871e-50 | 1.875072e-47 |
| MsG0180005913.01 | MsG0380014296.01 | 0.819832 | 9.440553e-53 | 7.345207e-50 |
| MsG0180005913.01 | MsG0380015166.01 | 0.846144 | 2.611986e-59 | 4.452798e-56 |
| MsG0180005913.01 | MsG0380015220.01 | 0.807213 | 5.640645e-50 | 3.123458e-47 |
| MsG0180005913.01 | MsG0380015818.01 | 0.813809 | 2.120460e-51 | 1.398806e-48 |
| MsG0180005913.01 | MsG0380016347.01 | -0.825381 | 4.834531e-54 | 4.399342e-51 |
| MsG0180005913.01 | MsG0380016505.01 | 0.803036 | 4.222108e-49 | 2.099868e-46 |
| MsG0180005913.01 | MsG0380016560.01 | 0.806968 | 6.356639e-50 | 3.497555e-47 |
| MsG0180005913.01 | MsG0380016671.01 | 0.810137 | 1.338613e-50 | 8.005344e-48 |
| MsG0180005913.01 | MsG0380016740.01 | 0.833715 | 4.547553e-56 | 5.280335e-53 |
| MsG0180005913.01 | MsG0380017023.01 | 0.808747 | 2.660296e-50 | 1.533382e-47 |
| MsG0180005913.01 | MsG0380017084.01 | 0.804177 | 2.448007e-49 | 1.253760e-46 |
| MsG0180005913.01 | MsG0380017085.01 | 0.801066 | 1.072788e-48 | 5.075619e-46 |
| MsG0180005913.01 | MsG0380017126.01 | 0.806493 | 8.008030e-50 | 4.352641e-47 |
| MsG0180005913.01 | MsG0380017263.01 | -0.800462 | 1.425261e-48 | 6.640167e-46 |
| MsG0180005913.01 | MsG0380017279.01 | 0.814769 | 1.301345e-51 | 8.809652e-49 |
| MsG0180005913.01 | MsG0380018022.01 | 0.843932 | 1.033681e-58 | 1.642732e-55 |
| MsG0180005913.01 | MsG0380018033.01 | 0.800548 | 1.368951e-48 | 6.391914e-46 |
| MsG0180005913.01 | MsG0380018044.01 | 0.810031 | 1.410744e-50 | 8.413965e-48 |
| MsG0180005913.01 | MsG0480018847.01 | 0.806489 | 8.024835e-50 | 4.361336e-47 |
| MsG0180005913.01 | MsG0480018850.01 | 0.813643 | 2.306940e-51 | 1.514952e-48 |
| MsG0180005913.01 | MsG0480018911.01 | 0.852402 | 4.725927e-61 | 9.863400e-58 |
| MsG0180005913.01 | MsG0480019148.01 | 0.832295 | 1.025380e-55 | 1.141101e-52 |
| MsG0180005913.01 | MsG0480019380.01 | 0.823907 | 1.075854e-53 | 9.387322e-51 |
| MsG0180005913.01 | MsG0480020024.01 | 0.831379 | 1.725944e-55 | 1.869713e-52 |
| MsG0180005913.01 | MsG0480020025.01 | 0.815754 | 7.862611e-52 | 5.468355e-49 |
| MsG0180005913.01 | MsG0480020887.01 | 0.807592 | 4.689349e-50 | 2.622179e-47 |
| MsG0180005913.01 | MsG0480021041.01 | 0.828015 | 1.136998e-54 | 1.116350e-51 |
| MsG0180005913.01 | MsG0480021706.01 | 0.811583 | 6.511925e-51 | 4.046231e-48 |
| MsG0180005913.01 | MsG0480021768.01 | 0.808175 | 3.523252e-50 | 2.000760e-47 |
| MsG0180005913.01 | MsG0480021776.01 | -0.822219 | 2.663231e-53 | 2.215162e-50 |
| MsG0180005913.01 | MsG0480022248.01 | 0.810039 | 1.405467e-50 | 8.384058e-48 |
| MsG0180005913.01 | MsG0480022292.01 | 0.816705 | 4.818640e-52 | 3.439293e-49 |
| MsG0180005913.01 | MsG0480022493.01 | 0.817370 | 3.416049e-52 | 2.483137e-49 |
| MsG0180005913.01 | MsG0480022672.01 | 0.829184 | 5.934025e-55 | 6.028614e-52 |
| MsG0180005913.01 | MsG0480022780.01 | 0.841356 | 4.993049e-58 | 7.317688e-55 |
| MsG0180005913.01 | MsG0480023055.01 | 0.815204 | 1.042213e-51 | 7.139139e-49 |
| MsG0180005913.01 | MsG0480023073.01 | 0.822984 | 1.768257e-53 | 1.503184e-50 |
| MsG0180005913.01 | MsG0480023384.01 | 0.823637 | 1.244320e-53 | 1.077497e-50 |
| MsG0180005913.01 | MsG0480023652.01 | 0.828996 | 6.588603e-55 | 6.655592e-52 |
| MsG0180005913.01 | MsG0480023660.01 | 0.831983 | 1.224708e-55 | 1.350741e-52 |
| MsG0180005913.01 | MsG0480023776.01 | 0.806269 | 8.930257e-50 | 4.826425e-47 |
| MsG0180005913.01 | MsG0480023867.01 | 0.873101 | 1.908058e-67 | 8.179629e-64 |
| MsG0180005913.01 | MsG0580024084.01 | 0.854719 | 1.020543e-61 | 2.300344e-58 |
| MsG0180005913.01 | MsG0580024161.01 | 0.818441 | 1.956916e-52 | 1.465089e-49 |
| MsG0180005913.01 | MsG0580024619.01 | 0.813588 | 2.372631e-51 | 1.555745e-48 |
| MsG0180005913.01 | MsG0580024930.01 | -0.818808 | 1.615457e-52 | 1.221614e-49 |
| MsG0180005913.01 | MsG0580025400.01 | 0.802232 | 6.184964e-49 | 3.013840e-46 |
| MsG0180005913.01 | MsG0580025756.01 | 0.803255 | 3.803558e-49 | 1.902400e-46 |
| MsG0180005913.01 | MsG0580025986.01 | 0.800468 | 1.421057e-48 | 6.621645e-46 |
| MsG0180005913.01 | MsG0580026137.01 | 0.824614 | 7.337270e-54 | 6.532994e-51 |
| MsG0180005913.01 | MsG0580026270.01 | 0.809198 | 2.130733e-50 | 1.243067e-47 |
| MsG0180005913.01 | MsG0580026439.01 | 0.828878 | 7.038568e-55 | 7.085306e-52 |
| MsG0180005913.01 | MsG0580026485.01 | 0.801255 | 9.817391e-49 | 4.666854e-46 |
| MsG0180005913.01 | MsG0580027103.01 | 0.801996 | 6.917228e-49 | 3.350408e-46 |
| MsG0180005913.01 | MsG0580028044.01 | 0.809843 | 1.548899e-50 | 9.192303e-48 |
| MsG0180005913.01 | MsG0580028582.01 | 0.814553 | 1.452712e-51 | 9.778240e-49 |
| MsG0180005913.01 | MsG0580028630.01 | 0.806834 | 6.786991e-50 | 3.721425e-47 |
| MsG0180005913.01 | MsG0580028754.01 | 0.808916 | 2.447507e-50 | 1.417052e-47 |
| MsG0180005913.01 | MsG0580028855.01 | 0.811488 | 6.828686e-51 | 4.232678e-48 |
| MsG0180005913.01 | MsG0580029376.01 | 0.827764 | 1.306297e-54 | 1.273068e-51 |
| MsG0180005913.01 | MsG0580029514.01 | -0.818132 | 2.299247e-52 | 1.706576e-49 |
| MsG0180005913.01 | MsG0580029549.01 | 0.806371 | 8.497417e-50 | 4.604268e-47 |
| MsG0180005913.01 | MsG0580029717.01 | 0.801504 | 8.728083e-49 | 4.175204e-46 |
| MsG0180005913.01 | MsG0580029879.01 | 0.820938 | 5.264738e-53 | 4.224175e-50 |
| MsG0180005913.01 | MsG0580029919.01 | 0.821240 | 4.484824e-53 | 3.628635e-50 |
| MsG0180005913.01 | MsG0680030350.01 | 0.818544 | 1.854887e-52 | 1.392544e-49 |
| MsG0180005913.01 | MsG0680030515.01 | 0.804574 | 2.024009e-49 | 1.047223e-46 |
| MsG0180005913.01 | MsG0680030555.01 | 0.824930 | 6.180244e-54 | 5.552663e-51 |
| MsG0180005913.01 | MsG0680030636.01 | 0.800365 | 1.491583e-48 | 6.932415e-46 |
| MsG0180005913.01 | MsG0680030764.01 | 0.809199 | 2.128835e-50 | 1.242029e-47 |
| MsG0180005913.01 | MsG0680031000.01 | 0.852780 | 3.688682e-61 | 7.793985e-58 |
| MsG0180005913.01 | MsG0680031939.01 | 0.800393 | 1.472258e-48 | 6.847431e-46 |
| MsG0180005913.01 | MsG0680034235.01 | 0.815526 | 8.836571e-52 | 6.107203e-49 |
| MsG0180005913.01 | MsG0680035765.01 | 0.811523 | 6.708512e-51 | 4.162051e-48 |
| MsG0180005913.01 | MsG0680035877.01 | 0.832369 | 9.833479e-56 | 1.096826e-52 |
| MsG0180005913.01 | MsG0780035937.01 | 0.801945 | 7.084950e-49 | 3.427138e-46 |
| MsG0180005913.01 | MsG0780035957.01 | 0.806559 | 7.757254e-50 | 4.223484e-47 |
| MsG0180005913.01 | MsG0780036117.01 | 0.802748 | 4.842944e-49 | 2.391172e-46 |
| MsG0180005913.01 | MsG0780036186.01 | 0.806110 | 9.646472e-50 | 5.192234e-47 |
| MsG0180005913.01 | MsG0780036659.01 | 0.823590 | 1.276217e-53 | 1.103603e-50 |
| MsG0180005913.01 | MsG0780036880.01 | 0.814456 | 1.526918e-51 | 1.025039e-48 |
| MsG0180005913.01 | MsG0780037082.01 | 0.805686 | 1.184334e-49 | 6.306036e-47 |
| MsG0180005913.01 | MsG0780037093.01 | 0.808588 | 2.876273e-50 | 1.651007e-47 |
| MsG0180005913.01 | MsG0780037330.01 | 0.841287 | 5.207746e-58 | 7.615368e-55 |
| MsG0180005913.01 | MsG0780039369.01 | 0.802718 | 4.911044e-49 | 2.422971e-46 |
| MsG0180005913.01 | MsG0780040375.01 | -0.806774 | 6.987328e-50 | 3.825214e-47 |
| MsG0180005913.01 | MsG0780040734.01 | 0.824254 | 8.918248e-54 | 7.857469e-51 |
| MsG0180005913.01 | MsG0780041006.01 | 0.806774 | 6.986051e-50 | 3.824546e-47 |
| MsG0180005913.01 | MsG0780041137.01 | 0.813354 | 2.671359e-51 | 1.740535e-48 |
| MsG0180005913.01 | MsG0780041435.01 | 0.835465 | 1.652269e-56 | 2.022055e-53 |
| MsG0180005913.01 | MsG0780041440.01 | 0.807426 | 5.084638e-50 | 2.831211e-47 |
| MsG0180005913.01 | MsG0780041729.01 | -0.858147 | 1.005462e-62 | 2.541185e-59 |
| MsG0180005913.01 | MsG0780041747.01 | 0.826320 | 2.893557e-54 | 2.704513e-51 |
| MsG0180005913.01 | MsG0880042033.01 | 0.833747 | 4.465902e-56 | 5.190589e-53 |
| MsG0180005913.01 | MsG0880042062.01 | 0.813642 | 2.308117e-51 | 1.515682e-48 |
| MsG0180005913.01 | MsG0880042108.01 | 0.814935 | 1.195463e-51 | 8.129435e-49 |
| MsG0180005913.01 | MsG0880042134.01 | 0.812644 | 3.821177e-51 | 2.442843e-48 |
| MsG0180005913.01 | MsG0880042622.01 | 0.800097 | 1.691166e-48 | 7.806560e-46 |
| MsG0180005913.01 | MsG0880043454.01 | 0.803361 | 3.616443e-49 | 1.813637e-46 |
| MsG0180005913.01 | MsG0880044728.01 | 0.801035 | 1.088806e-48 | 5.147420e-46 |
| MsG0180005913.01 | MsG0880044975.01 | 0.806926 | 6.486830e-50 | 3.565293e-47 |
| MsG0180005913.01 | MsG0880045017.01 | 0.805664 | 1.196662e-49 | 6.367935e-47 |
| MsG0180005913.01 | MsG0880045362.01 | 0.801628 | 8.231653e-49 | 3.949926e-46 |
| MsG0180005913.01 | MsG0880045460.01 | 0.828670 | 7.903654e-55 | 7.908837e-52 |
| MsG0180005913.01 | MsG0880045684.01 | 0.843062 | 1.765549e-58 | 2.729416e-55 |
| MsG0180005913.01 | MsG0880045765.01 | 0.803537 | 3.324703e-49 | 1.675073e-46 |
| MsG0180005913.01 | MsG0880045869.01 | 0.807677 | 4.497029e-50 | 2.520353e-47 |
| MsG0180005913.01 | MsG0880046517.01 | 0.815958 | 7.079369e-52 | 4.950838e-49 |
| MsG0180005913.01 | MsG0880046620.01 | 0.804584 | 2.013511e-49 | 1.042099e-46 |
| MsG0180005913.01 | MsG0880046963.01 | -0.845176 | 4.780580e-59 | 7.899838e-56 |
| MsG0180005913.01 | MsG0880047052.01 | 0.822688 | 2.071635e-53 | 1.746376e-50 |
| MsG0180005913.01 | MsG0880047152.01 | 0.802964 | 4.368873e-49 | 2.168934e-46 |
| MsG0180005913.01 | MsG0880047212.01 | 0.818949 | 1.500819e-52 | 1.139507e-49 |
| MsG0180005913.01 | MsG0880047696.01 | 0.813250 | 2.814222e-51 | 1.828343e-48 |
| MsG0180005913.01 | MsG0880047703.01 | 0.816019 | 6.862052e-52 | 4.807055e-49 |
| MsG0180005913.01 | MsG0880047763.01 | 0.815024 | 1.142760e-51 | 7.790096e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005913.01.T01 | MTR_1g109370 | 81.569 | 255 | 8 | 2 | 1 | 255 | 1 | 216 | 8.02e-135 | 379 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005913.01.T01 | AT1G68185 | 40.698 | 258 | 107 | 7 | 1 | 255 | 1 | 215 | 1.20e-41 | 142 |
| MsG0180005913.01.T01 | AT1G68185 | 40.698 | 258 | 107 | 7 | 1 | 255 | 1 | 215 | 1.20e-41 | 142 |
| MsG0180005913.01.T01 | AT1G68185 | 40.698 | 258 | 107 | 7 | 1 | 255 | 47 | 261 | 5.65e-41 | 142 |
Find 74 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAGCTGAGATTGACATTT+TGG | 0.125187 | 1:-97470562 | MsG0180005913.01.T01:three_prime_UTR |
| ACCCTCATGTTATACAAATT+TGG | 0.152649 | 1:+97470174 | None:intergenic |
| AATAATTAATGATTATATTT+TGG | 0.153894 | 1:+97470271 | None:intergenic |
| GTATAACATGAGGGTTATTT+AGG | 0.223417 | 1:-97470166 | MsG0180005913.01.T01:three_prime_UTR |
| CCTCCTCATCAGTCTTCTTA+TGG | 0.228908 | 1:+97472515 | None:intergenic |
| GAATTCTTCTTTCTCTTCTT+AGG | 0.234591 | 1:+97472747 | None:intergenic |
| ACCATCGAGGCACACGATAT+TGG | 0.263756 | 1:+97472911 | None:intergenic |
| AAAGCAGATTCGGATGTTTA+TGG | 0.264643 | 1:-97471829 | MsG0180005913.01.T01:CDS |
| ATGTGAAGTCAAGTTGATTT+AGG | 0.273644 | 1:-97471411 | MsG0180005913.01.T01:intron |
| GCAGCTGTTGGCCCTCTCTA+AGG | 0.327070 | 1:-97470235 | MsG0180005913.01.T01:three_prime_UTR |
| TATCATTATCTTCCATTTCA+AGG | 0.332434 | 1:+97471446 | None:intergenic |
| ATGATGTTGTGCATTATGTT+TGG | 0.333046 | 1:-97470346 | MsG0180005913.01.T01:three_prime_UTR |
| CAAAATCCAGACAGCGATAA+TGG | 0.337536 | 1:-97473072 | MsG0180005913.01.T01:exon |
| AAAATATGTACTGTACAATT+AGG | 0.339197 | 1:+97470454 | None:intergenic |
| GATTCGGATGTTTATGGTAC+TGG | 0.361842 | 1:-97471823 | MsG0180005913.01.T01:CDS |
| TGCACAACATCATCAATAGA+AGG | 0.365604 | 1:+97470356 | None:intergenic |
| TAGTTGTAGTTTGTTTGAAA+TGG | 0.372898 | 1:-97471724 | MsG0180005913.01.T01:intron |
| CCATCGAGGCACACGATATT+GGG | 0.373094 | 1:+97472912 | None:intergenic |
| AGTCTTCTTATGGGCCTTAC+CGG | 0.377421 | 1:+97472525 | None:intergenic |
| GTAGAAGTTCTTTCGGTGTA+TGG | 0.379855 | 1:-97470404 | MsG0180005913.01.T01:three_prime_UTR |
| CTCCTCATCAGTCTTCTTAT+GGG | 0.387413 | 1:+97472516 | None:intergenic |
| AAACAAGGGTTCAAGTTCTT+CGG | 0.392297 | 1:+97472953 | None:intergenic |
| AACCCCTGCCAGCCTTGAAA+TGG | 0.394451 | 1:-97471458 | MsG0180005913.01.T01:CDS |
| TGATGTTGTGCATTATGTTT+GGG | 0.409527 | 1:-97470345 | MsG0180005913.01.T01:three_prime_UTR |
| CAAATTGTGTTGTCATTTGA+CGG | 0.420581 | 1:-97471502 | MsG0180005913.01.T01:CDS |
| CCCAATATCGTGTGCCTCGA+TGG | 0.441844 | 1:-97472912 | MsG0180005913.01.T01:intron |
| ATTCAACTTTGAAGAATTTG+AGG | 0.442827 | 1:-97472492 | MsG0180005913.01.T01:intron |
| AGGGTTATTTAGGATACAAA+TGG | 0.446647 | 1:-97470156 | MsG0180005913.01.T01:three_prime_UTR |
| TTTGGGGTTTAGGTTGAGAA+TGG | 0.451301 | 1:-97472625 | MsG0180005913.01.T01:intron |
| CTGATGCAGATCTTCGATCA+TGG | 0.453261 | 1:-97470582 | MsG0180005913.01.T01:intron |
| TCTTCCATTTCAAGGCTGGC+AGG | 0.456162 | 1:+97471454 | None:intergenic |
| AGGATGAAACAAAGCAGATT+CGG | 0.459454 | 1:-97471839 | MsG0180005913.01.T01:CDS |
| TTCCATTTCAAGGCTGGCAG+GGG | 0.465493 | 1:+97471456 | None:intergenic |
| GCCTTACCGGTGACCCTTGG+TGG | 0.466237 | 1:+97472538 | None:intergenic |
| TGTTGATGTTCTTAATATTG+TGG | 0.474377 | 1:-97471775 | MsG0180005913.01.T01:CDS |
| CCACAACAACTGCCGTGAAA+AGG | 0.475289 | 1:+97470206 | None:intergenic |
| ACTGTGTATGTTGCTTGCCT+AGG | 0.475944 | 1:-97470128 | MsG0180005913.01.T01:three_prime_UTR |
| TGGGCCTTACCGGTGACCCT+TGG | 0.476360 | 1:+97472535 | None:intergenic |
| ATTATCTTCCATTTCAAGGC+TGG | 0.485099 | 1:+97471450 | None:intergenic |
| GCCACCAAGGGTCACCGGTA+AGG | 0.490738 | 1:-97472539 | MsG0180005913.01.T01:CDS |
| CTTCCATTTCAAGGCTGGCA+GGG | 0.494291 | 1:+97471455 | None:intergenic |
| CAATTCATTGCAACCTTCCG+TGG | 0.499026 | 1:-97471928 | MsG0180005913.01.T01:CDS |
| TTATTTATGCTAGCAGCTGT+TGG | 0.504433 | 1:-97470247 | MsG0180005913.01.T01:three_prime_UTR |
| TTGGGGTTTAGGTTGAGAAT+GGG | 0.505216 | 1:-97472624 | MsG0180005913.01.T01:intron |
| GTTCTTTCGGTGTATGGCAT+AGG | 0.505606 | 1:-97470398 | MsG0180005913.01.T01:three_prime_UTR |
| AGAATCTTTGCTCGTTCAGA+AGG | 0.520871 | 1:+97471879 | None:intergenic |
| TCACCGCCATTATCGCTGTC+TGG | 0.521152 | 1:+97473066 | None:intergenic |
| TTTGTATAGATTGAAGAAGC+AGG | 0.529052 | 1:-97472024 | MsG0180005913.01.T01:intron |
| TCACTTACGTCGTCCACGGA+AGG | 0.541348 | 1:+97471915 | None:intergenic |
| AACCAAATTTGTATAACATG+AGG | 0.548156 | 1:-97470176 | MsG0180005913.01.T01:three_prime_UTR |
| CCGGTGACCCTTGGTGGCGA+AGG | 0.548861 | 1:+97472544 | None:intergenic |
| TGTAGGATGACCAGTTTGAA+AGG | 0.550107 | 1:-97471567 | MsG0180005913.01.T01:intron |
| ACCAAATTTGTATAACATGA+GGG | 0.557726 | 1:-97470175 | MsG0180005913.01.T01:three_prime_UTR |
| TTTCTAAACACTTCACACCT+AGG | 0.563587 | 1:+97470111 | None:intergenic |
| CCTTCGCCACCAAGGGTCAC+CGG | 0.569098 | 1:-97472544 | MsG0180005913.01.T01:CDS |
| TGAGAATGGGAAGAATACTA+AGG | 0.569816 | 1:-97472611 | MsG0180005913.01.T01:CDS |
| TTGGTTACCTTCGCCACCAA+GGG | 0.579619 | 1:-97472551 | MsG0180005913.01.T01:CDS |
| GCACAACATCATCAATAGAA+GGG | 0.585781 | 1:+97470357 | None:intergenic |
| AACGCGACTGTAATCAAACA+AGG | 0.602179 | 1:+97472938 | None:intergenic |
| AAAAGGTTACAGCCTTAGAG+AGG | 0.611672 | 1:+97470223 | None:intergenic |
| GAATGGGAAGAATACTAAGG+TGG | 0.613980 | 1:-97472608 | MsG0180005913.01.T01:CDS |
| TGGACCTCGAGGATGATGAT+TGG | 0.623297 | 1:-97472570 | MsG0180005913.01.T01:CDS |
| TCTCATCTCTGTTCAAGACA+AGG | 0.626807 | 1:-97471859 | MsG0180005913.01.T01:CDS |
| CCATAAGAAGACTGATGAGG+AGG | 0.627181 | 1:-97472515 | MsG0180005913.01.T01:CDS |
| ATTGGTTACCTTCGCCACCA+AGG | 0.629138 | 1:-97472552 | MsG0180005913.01.T01:CDS |
| AAAGGTTACAGCCTTAGAGA+GGG | 0.685304 | 1:+97470224 | None:intergenic |
| TAAGGTGGAAACAGTGAATG+TGG | 0.687527 | 1:-97472593 | MsG0180005913.01.T01:CDS |
| GGCCCATAAGAAGACTGATG+AGG | 0.692280 | 1:-97472518 | MsG0180005913.01.T01:CDS |
| AGTGAATGTGGTGGACCTCG+AGG | 0.707436 | 1:-97472581 | MsG0180005913.01.T01:CDS |
| GGTGGAAACAGTGAATGTGG+TGG | 0.711849 | 1:-97472590 | MsG0180005913.01.T01:CDS |
| AATCCAGACAGCGATAATGG+CGG | 0.717060 | 1:-97473069 | MsG0180005913.01.T01:intron |
| TTAAGGAGTGCTAACCATCG+AGG | 0.734889 | 1:+97472898 | None:intergenic |
| ACGCGACTGTAATCAAACAA+GGG | 0.742183 | 1:+97472939 | None:intergenic |
| GTAACCAATCATCATCCTCG+AGG | 0.759157 | 1:+97472566 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACAAAAAATTAAACATT+TGG | + | Chr1:97470452-97470471 | None:intergenic | 10.0% |
| !! | AAACAAAAAATTAAACATTT+GGG | + | Chr1:97470451-97470470 | None:intergenic | 10.0% |
| !! | TTAATTTCAATTTGAATAAT+CGG | + | Chr1:97470424-97470443 | None:intergenic | 10.0% |
| !! | AAATTGAAAATATTATCTTC+TGG | + | Chr1:97472179-97472198 | None:intergenic | 15.0% |
| !! | AACAAAAAATTAAACATTTG+GGG | + | Chr1:97470450-97470469 | None:intergenic | 15.0% |
| !! | CTGATAAAGAAAATAAAAAA+AGG | + | Chr1:97471621-97471640 | None:intergenic | 15.0% |
| !! | TACTCAATTTCAAATAATTA+GGG | - | Chr1:97470256-97470275 | MsG0180005913.01.T01:three_prime_UTR | 15.0% |
| !!! | ATTTTAAAGTAAGAAAACTA+AGG | - | Chr1:97472072-97472091 | MsG0180005913.01.T01:intron | 15.0% |
| !!! | ATTTTCAATTTTTTCAACAA+TGG | - | Chr1:97472188-97472207 | MsG0180005913.01.T01:intron | 15.0% |
| !!! | GTAAATTTTGATAATGTTTT+GGG | - | Chr1:97470649-97470668 | MsG0180005913.01.T01:intron | 15.0% |
| !!! | TAAATTTTGATAATGTTTTG+GGG | - | Chr1:97470650-97470669 | MsG0180005913.01.T01:intron | 15.0% |
| !!! | TGTAAATTTTGATAATGTTT+TGG | - | Chr1:97470648-97470667 | MsG0180005913.01.T01:intron | 15.0% |
| !!! | TTTTTTGTTTTTTGTTTTGA+AGG | + | Chr1:97470139-97470158 | None:intergenic | 15.0% |
| !! | AAAATATGTACTGTACAATT+AGG | + | Chr1:97472840-97472859 | None:intergenic | 20.0% |
| !! | AATGGCAAAAAACAAAAATT+TGG | + | Chr1:97470862-97470881 | None:intergenic | 20.0% |
| !! | ACAAAAAATTAAACATTTGG+GGG | + | Chr1:97470449-97470468 | None:intergenic | 20.0% |
| !! | ATGAGTAGAATAACTTATAT+TGG | + | Chr1:97471176-97471195 | None:intergenic | 20.0% |
| !! | CAAAACAAAAAACACAAATT+TGG | + | Chr1:97470601-97470620 | None:intergenic | 20.0% |
| !! | GTACTCAATTTCAAATAATT+AGG | - | Chr1:97470255-97470274 | MsG0180005913.01.T01:three_prime_UTR | 20.0% |
| !! | TAAAATAACATGCTCATAAA+GGG | - | Chr1:97471043-97471062 | MsG0180005913.01.T01:intron | 20.0% |
| !! | TAAAGAAAATAAAAAAAGGC+AGG | + | Chr1:97471617-97471636 | None:intergenic | 20.0% |
| !! | TTAAAATAACATGCTCATAA+AGG | - | Chr1:97471042-97471061 | MsG0180005913.01.T01:intron | 20.0% |
| !!! | ATTTTGTTTATAATAGTGAC+CGG | + | Chr1:97472345-97472364 | None:intergenic | 20.0% |
| !!! | GCTTTTTTATCAATTTTTAC+TGG | - | Chr1:97472780-97472799 | MsG0180005913.01.T01:intron | 20.0% |
| !!! | TTGTATAAAAAAAGTGTGTT+GGG | - | Chr1:97471091-97471110 | MsG0180005913.01.T01:intron | 20.0% |
| ! | AACCAAATTTGTATAACATG+AGG | - | Chr1:97473115-97473134 | MsG0180005913.01.T01:five_prime_UTR | 25.0% |
| ! | ACATCTTATAAGAAACTGTA+TGG | + | Chr1:97471241-97471260 | None:intergenic | 25.0% |
| ! | ACCAAATTTGTATAACATGA+GGG | - | Chr1:97473116-97473135 | MsG0180005913.01.T01:five_prime_UTR | 25.0% |
| ! | TAACTAATTAAGCCTATTCT+TGG | - | Chr1:97471138-97471157 | MsG0180005913.01.T01:intron | 25.0% |
| ! | TAAGTAAACAAACAATGCAA+TGG | + | Chr1:97470880-97470899 | None:intergenic | 25.0% |
| ! | TATCATTATCTTCCATTTCA+AGG | + | Chr1:97471848-97471867 | None:intergenic | 25.0% |
| ! | TGAATTTGTATTCAAGTGTA+TGG | - | Chr1:97472021-97472040 | MsG0180005913.01.T01:intron | 25.0% |
| ! | TGTGGTAAATATCATTTGTA+AGG | - | Chr1:97472258-97472277 | MsG0180005913.01.T01:intron | 25.0% |
| ! | TGTTGATGTTCTTAATATTG+TGG | - | Chr1:97471516-97471535 | MsG0180005913.01.T01:CDS | 25.0% |
| ! | TTGAATAATCGGAATAGTTA+AGG | + | Chr1:97470413-97470432 | None:intergenic | 25.0% |
| ! | TTGAATACAAATTCATCATC+AGG | + | Chr1:97472016-97472035 | None:intergenic | 25.0% |
| !! | AACTCTATAGAATTTTGTCA+AGG | - | Chr1:97472978-97472997 | MsG0180005913.01.T01:intron | 25.0% |
| !! | AGTTTGTTTGAAATGGTATA+AGG | - | Chr1:97471574-97471593 | MsG0180005913.01.T01:intron | 25.0% |
| !! | ATTCAACTTTGAAGAATTTG+AGG | - | Chr1:97470799-97470818 | MsG0180005913.01.T01:intron | 25.0% |
| !! | ATTTTGCTTATAATAGTGAC+CGG | - | Chr1:97472451-97472470 | MsG0180005913.01.T01:intron | 25.0% |
| !! | CTTGTATAAAAAAAGTGTGT+TGG | - | Chr1:97471090-97471109 | MsG0180005913.01.T01:intron | 25.0% |
| !! | GTTTGTTTGAAATGGTATAA+GGG | - | Chr1:97471575-97471594 | MsG0180005913.01.T01:intron | 25.0% |
| !! | TGAAGATTTGAAATTGAAAG+AGG | + | Chr1:97470284-97470303 | None:intergenic | 25.0% |
| !!! | GTCTTCTATATTTTAAGAAC+TGG | + | Chr1:97472818-97472837 | None:intergenic | 25.0% |
| !!! | TAGTTGTAGTTTGTTTGAAA+TGG | - | Chr1:97471567-97471586 | MsG0180005913.01.T01:intron | 25.0% |
| !!! | TGTGTTTTTTGTTTTGTACA+AGG | - | Chr1:97470605-97470624 | MsG0180005913.01.T01:intron | 25.0% |
| !!! | TTGTACAGTACATATTTTGA+CGG | - | Chr1:97472842-97472861 | MsG0180005913.01.T01:intron | 25.0% |
| !!! | TTTTGATAATCCTTTCAAAC+TGG | + | Chr1:97471737-97471756 | None:intergenic | 25.0% |
| !!! | TTTTTAGGTAGAAGTTCTTT+CGG | - | Chr1:97472880-97472899 | MsG0180005913.01.T01:intron | 25.0% |
| AAATTATTCATTACTCCCTC+CGG | - | Chr1:97472323-97472342 | MsG0180005913.01.T01:intron | 30.0% | |
| AATGATGAATGCTCATACTT+AGG | - | Chr1:97472234-97472253 | MsG0180005913.01.T01:intron | 30.0% | |
| AATTAAGCCTATTCTTGGTT+TGG | - | Chr1:97471143-97471162 | MsG0180005913.01.T01:intron | 30.0% | |
| ACCCTCATGTTATACAAATT+TGG | + | Chr1:97473120-97473139 | None:intergenic | 30.0% | |
| ATCCTACAGAGAATTGAAAA+AGG | + | Chr1:97471712-97471731 | None:intergenic | 30.0% | |
| ATGATGAATGCTCATACTTA+GGG | - | Chr1:97472235-97472254 | MsG0180005913.01.T01:intron | 30.0% | |
| ATGATGTTGTGCATTATGTT+TGG | - | Chr1:97472945-97472964 | MsG0180005913.01.T01:CDS | 30.0% | |
| GAATTCTTCTTTCTCTTCTT+AGG | + | Chr1:97470547-97470566 | None:intergenic | 30.0% | |
| GGTAAATATCATTTGTAAGG+AGG | - | Chr1:97472261-97472280 | MsG0180005913.01.T01:intron | 30.0% | |
| GTATAACATGAGGGTTATTT+AGG | - | Chr1:97473125-97473144 | MsG0180005913.01.T01:five_prime_UTR | 30.0% | |
| TAAAGTTCCAAACCAAGAAT+AGG | + | Chr1:97471153-97471172 | None:intergenic | 30.0% | |
| TGATGTTGTGCATTATGTTT+GGG | - | Chr1:97472946-97472965 | MsG0180005913.01.T01:CDS | 30.0% | |
| TTTGTATAGATTGAAGAAGC+AGG | - | Chr1:97471267-97471286 | MsG0180005913.01.T01:intron | 30.0% | |
| TTTGTTTACTTAACACTCCT+AGG | - | Chr1:97470888-97470907 | MsG0180005913.01.T01:intron | 30.0% | |
| ! | AGGGTTATTTAGGATACAAA+TGG | - | Chr1:97473135-97473154 | MsG0180005913.01.T01:five_prime_UTR | 30.0% |
| ! | CAAATTGTGTTGTCATTTGA+CGG | - | Chr1:97471789-97471808 | MsG0180005913.01.T01:CDS | 30.0% |
| ! | CAATTGATTATGCTGTTTGT+TGG | - | Chr1:97472621-97472640 | MsG0180005913.01.T01:intron | 30.0% |
| !! | AAGCGAATTCAATTTTGAAG+CGG | - | Chr1:97470161-97470180 | MsG0180005913.01.T01:three_prime_UTR | 30.0% |
| !! | AGATCCACTTCTATTTCTAA+TGG | + | Chr1:97472125-97472144 | None:intergenic | 30.0% |
| !! | ATGTGAAGTCAAGTTGATTT+AGG | - | Chr1:97471880-97471899 | MsG0180005913.01.T01:CDS | 30.0% |
| !! | TAGGCATTGTTATGTGATTT+TGG | - | Chr1:97472488-97472507 | MsG0180005913.01.T01:intron | 30.0% |
| !! | TATTTGTCACTTTATCTAGC+TGG | - | Chr1:97471674-97471693 | MsG0180005913.01.T01:intron | 30.0% |
| !! | TGGTTTAACTTGTTAAACCT+AGG | + | Chr1:97470908-97470927 | None:intergenic | 30.0% |
| !! | TTGTTTTGTACAAGGATGTT+TGG | - | Chr1:97470613-97470632 | MsG0180005913.01.T01:intron | 30.0% |
| !! | TTTTCCGATTCGTTTGATTT+CGG | + | Chr1:97470979-97470998 | None:intergenic | 30.0% |
| !!! | GTAGCAATGTTTTAAAAACC+AGG | + | Chr1:97471007-97471026 | None:intergenic | 30.0% |
| !!! | TTGATAATGTTTTGGGGTTT+AGG | - | Chr1:97470656-97470675 | MsG0180005913.01.T01:intron | 30.0% |
| AAAGCAGATTCGGATGTTTA+TGG | - | Chr1:97471462-97471481 | MsG0180005913.01.T01:CDS | 35.0% | |
| ACAATGTAGTCTGATTGAAC+TGG | + | Chr1:97470954-97470973 | None:intergenic | 35.0% | |
| ACATGTTTATTCTTAGCCTC+AGG | - | Chr1:97472294-97472313 | MsG0180005913.01.T01:intron | 35.0% | |
| AGAACAATGCAACAATGCAA+AGG | + | Chr1:97472527-97472546 | None:intergenic | 35.0% | |
| AGCACCATTAGAAATAGAAG+TGG | - | Chr1:97472118-97472137 | MsG0180005913.01.T01:intron | 35.0% | |
| AGGATGAAACAAAGCAGATT+CGG | - | Chr1:97471452-97471471 | MsG0180005913.01.T01:CDS | 35.0% | |
| ATTATCTTCCATTTCAAGGC+TGG | + | Chr1:97471844-97471863 | None:intergenic | 35.0% | |
| ATTCAAGTGTATGGAAAGAG+AGG | - | Chr1:97472030-97472049 | MsG0180005913.01.T01:intron | 35.0% | |
| GCACAACATCATCAATAGAA+GGG | + | Chr1:97472937-97472956 | None:intergenic | 35.0% | |
| GTAACCGAAATCAAACGAAT+CGG | - | Chr1:97470972-97470991 | MsG0180005913.01.T01:intron | 35.0% | |
| TATCAGAGCTGCATTTCTTT+AGG | - | Chr1:97471635-97471654 | MsG0180005913.01.T01:intron | 35.0% | |
| TGAATAATTTCCTCTACCTG+AGG | + | Chr1:97472313-97472332 | None:intergenic | 35.0% | |
| TGAGAATGGGAAGAATACTA+AGG | - | Chr1:97470680-97470699 | MsG0180005913.01.T01:intron | 35.0% | |
| TGCACAACATCATCAATAGA+AGG | + | Chr1:97472938-97472957 | None:intergenic | 35.0% | |
| TGTTTATAATAGTGACCGGA+GGG | + | Chr1:97472341-97472360 | None:intergenic | 35.0% | |
| TTATTTATGCTAGCAGCTGT+TGG | - | Chr1:97473044-97473063 | MsG0180005913.01.T01:intron | 35.0% | |
| TTGTTTATAATAGTGACCGG+AGG | + | Chr1:97472342-97472361 | None:intergenic | 35.0% | |
| TTTCTAAACACTTCACACCT+AGG | + | Chr1:97473183-97473202 | None:intergenic | 35.0% | |
| ! | AAACAAGGGTTCAAGTTCTT+CGG | + | Chr1:97470341-97470360 | None:intergenic | 35.0% |
| ! | ACTAACATGTGCTGCAATTT+TGG | - | Chr1:97472646-97472665 | MsG0180005913.01.T01:intron | 35.0% |
| ! | GCATTGTTATGTGATTTTGG+AGG | - | Chr1:97472491-97472510 | MsG0180005913.01.T01:intron | 35.0% |
| !! | AATGTCTTGGAGCACTTTTT+AGG | - | Chr1:97472865-97472884 | MsG0180005913.01.T01:intron | 35.0% |
| !!! | AGCGAATTCAATTTTGAAGC+GGG | - | Chr1:97470162-97470181 | MsG0180005913.01.T01:three_prime_UTR | 35.0% |
| !!! | CATATTTTGACGGAATGTCT+TGG | - | Chr1:97472852-97472871 | MsG0180005913.01.T01:intron | 35.0% |
| !!! | CTCCTTTTTCAATTCTCTGT+AGG | - | Chr1:97471707-97471726 | MsG0180005913.01.T01:intron | 35.0% |
| !!! | GGTTGTTTTTATTAGTGCTC+TGG | - | Chr1:97471537-97471556 | MsG0180005913.01.T01:CDS | 35.0% |
| !!! | TTTTGCTGATTCAGCAAAAG+CGG | + | Chr1:97471299-97471318 | None:intergenic | 35.0% |
| AAAAGGTTACAGCCTTAGAG+AGG | + | Chr1:97473071-97473090 | None:intergenic | 40.0% | |
| AAAGGTTACAGCCTTAGAGA+GGG | + | Chr1:97473070-97473089 | None:intergenic | 40.0% | |
| AAATGCTACTAGAGCAGAAG+AGG | + | Chr1:97472593-97472612 | None:intergenic | 40.0% | |
| AACGCGACTGTAATCAAACA+AGG | + | Chr1:97470356-97470375 | None:intergenic | 40.0% | |
| ACGCGACTGTAATCAAACAA+GGG | + | Chr1:97470355-97470374 | None:intergenic | 40.0% | |
| AGAATCTTTGCTCGTTCAGA+AGG | + | Chr1:97471415-97471434 | None:intergenic | 40.0% | |
| ATCGAAGATCTGCATCAGAA+AGG | + | Chr1:97472707-97472726 | None:intergenic | 40.0% | |
| CAAAATCCAGACAGCGATAA+TGG | - | Chr1:97470219-97470238 | MsG0180005913.01.T01:three_prime_UTR | 40.0% | |
| CTCCTCATCAGTCTTCTTAT+GGG | + | Chr1:97470778-97470797 | None:intergenic | 40.0% | |
| GAATGGGAAGAATACTAAGG+TGG | - | Chr1:97470683-97470702 | MsG0180005913.01.T01:intron | 40.0% | |
| GAGTTGAATCAGTTGAATCG+CGG | + | Chr1:97470932-97470951 | None:intergenic | 40.0% | |
| GATTCGGATGTTTATGGTAC+TGG | - | Chr1:97471468-97471487 | MsG0180005913.01.T01:CDS | 40.0% | |
| GTTGCATTGTTCTTTGCCAT+TGG | - | Chr1:97472534-97472553 | MsG0180005913.01.T01:CDS | 40.0% | |
| TAAGGACCTTTCTTTCTCTG+AGG | - | Chr1:97472090-97472109 | MsG0180005913.01.T01:intron | 40.0% | |
| TAAGGTGGAAACAGTGAATG+TGG | - | Chr1:97470698-97470717 | MsG0180005913.01.T01:intron | 40.0% | |
| TATGGAAAGAGAGGATGACA+GGG | - | Chr1:97472039-97472058 | MsG0180005913.01.T01:intron | 40.0% | |
| TCTCATCTCTGTTCAAGACA+AGG | - | Chr1:97471432-97471451 | MsG0180005913.01.T01:CDS | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | Chr1:97472455-97472474 | MsG0180005913.01.T01:intron | 40.0% | |
| TGTAGGATGACCAGTTTGAA+AGG | - | Chr1:97471724-97471743 | MsG0180005913.01.T01:intron | 40.0% | |
| TTACTGCCTCAGAGAAAGAA+AGG | + | Chr1:97472099-97472118 | None:intergenic | 40.0% | |
| TTATTCTTAGCCTCAGGTAG+AGG | - | Chr1:97472300-97472319 | MsG0180005913.01.T01:intron | 40.0% | |
| TTCGGTTTCATCCTGCAAAT+GGG | + | Chr1:97470323-97470342 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | Chr1:97472454-97472473 | MsG0180005913.01.T01:intron | 40.0% | |
| ! | CTAAGGCTGTAACCTTTTCA+CGG | - | Chr1:97473073-97473092 | MsG0180005913.01.T01:exon | 40.0% |
| ! | GAGCTGAGATTGACATTTTG+GGG | - | Chr1:97472731-97472750 | MsG0180005913.01.T01:CDS | 40.0% |
| ! | GGAGCTGAGATTGACATTTT+GGG | - | Chr1:97472730-97472749 | MsG0180005913.01.T01:intron | 40.0% |
| ! | GTAGAAGTTCTTTCGGTGTA+TGG | - | Chr1:97472887-97472906 | MsG0180005913.01.T01:intron | 40.0% |
| ! | TGGAGCTGAGATTGACATTT+TGG | - | Chr1:97472729-97472748 | MsG0180005913.01.T01:intron | 40.0% |
| ! | TGTGTGTTTTTCCCATTTGC+AGG | - | Chr1:97470309-97470328 | MsG0180005913.01.T01:three_prime_UTR | 40.0% |
| ! | TTTTTCACTTACGTCGTCCA+CGG | + | Chr1:97471383-97471402 | None:intergenic | 40.0% |
| !! | ACATTTTGGGGACTCGTTTT+TGG | - | Chr1:97472743-97472762 | MsG0180005913.01.T01:CDS | 40.0% |
| !! | CAGTTCAGAAGTGTCATTTG+TGG | - | Chr1:97472567-97472586 | MsG0180005913.01.T01:CDS | 40.0% |
| !! | TTGGGGTTTAGGTTGAGAAT+GGG | - | Chr1:97470667-97470686 | MsG0180005913.01.T01:intron | 40.0% |
| !! | TTTGGGGTTTAGGTTGAGAA+TGG | - | Chr1:97470666-97470685 | MsG0180005913.01.T01:intron | 40.0% |
| !!! | CGCTGTCTGGATTTTGATTA+AGG | + | Chr1:97470215-97470234 | None:intergenic | 40.0% |
| AACAATGGTGAAGTGCAACG+AGG | - | Chr1:97472203-97472222 | MsG0180005913.01.T01:intron | 45.0% | |
| ACGAATCGGAAAACTGAACC+TGG | - | Chr1:97470986-97471005 | MsG0180005913.01.T01:intron | 45.0% | |
| AGTCTTCTTATGGGCCTTAC+CGG | + | Chr1:97470769-97470788 | None:intergenic | 45.0% | |
| CAATTCATTGCAACCTTCCG+TGG | - | Chr1:97471363-97471382 | MsG0180005913.01.T01:intron | 45.0% | |
| CCATAAGAAGACTGATGAGG+AGG | - | Chr1:97470776-97470795 | MsG0180005913.01.T01:intron | 45.0% | |
| CCTCCTCATCAGTCTTCTTA+TGG | + | Chr1:97470779-97470798 | None:intergenic | 45.0% | |
| CTGATGCAGATCTTCGATCA+TGG | - | Chr1:97472709-97472728 | MsG0180005913.01.T01:intron | 45.0% | |
| CTTCGGTTTCATCCTGCAAA+TGG | + | Chr1:97470324-97470343 | None:intergenic | 45.0% | |
| GAACTGTAGAGACAAGCCAA+TGG | + | Chr1:97472553-97472572 | None:intergenic | 45.0% | |
| GAATGCTCATACTTAGGGTG+TGG | - | Chr1:97472240-97472259 | MsG0180005913.01.T01:intron | 45.0% | |
| GCCTAATCAAATACTCCCTC+CGG | + | Chr1:97472473-97472492 | None:intergenic | 45.0% | |
| GTAACCAATCATCATCCTCG+AGG | + | Chr1:97470728-97470747 | None:intergenic | 45.0% | |
| GTATGGAAAGAGAGGATGAC+AGG | - | Chr1:97472038-97472057 | MsG0180005913.01.T01:intron | 45.0% | |
| TGAATCAGTTGAATCGCGGT+TGG | + | Chr1:97470928-97470947 | None:intergenic | 45.0% | |
| ! | AATCCAGACAGCGATAATGG+CGG | - | Chr1:97470222-97470241 | MsG0180005913.01.T01:three_prime_UTR | 45.0% |
| ! | ACTGTGTATGTTGCTTGCCT+AGG | - | Chr1:97473163-97473182 | MsG0180005913.01.T01:five_prime_UTR | 45.0% |
| ! | GTTCTTTCGGTGTATGGCAT+AGG | - | Chr1:97472893-97472912 | MsG0180005913.01.T01:intron | 45.0% |
| !! | ACCGGAGGGAGTATTTGATT+AGG | - | Chr1:97472469-97472488 | MsG0180005913.01.T01:intron | 45.0% |
| !! | TTAAGGAGTGCTAACCATCG+AGG | + | Chr1:97470396-97470415 | None:intergenic | 45.0% |
| !!! | AATAATTAATGATTATATTT+TGG | + | Chr1:97473023-97473042 | None:intergenic | 5.0% |
| !!! | TATTTTAGAATAAAAATAAA+AGG | + | Chr1:97470475-97470494 | None:intergenic | 5.0% |
| AAAGAGAGGATGACAGGGTG+GGG | - | Chr1:97472044-97472063 | MsG0180005913.01.T01:intron | 50.0% | |
| ACCATCGAGGCACACGATAT+TGG | + | Chr1:97470383-97470402 | None:intergenic | 50.0% | |
| AGGCAGGCAGATCAGAAACA+TGG | + | Chr1:97471601-97471620 | None:intergenic | 50.0% | |
| ATTGGTTACCTTCGCCACCA+AGG | - | Chr1:97470739-97470758 | MsG0180005913.01.T01:intron | 50.0% | |
| CCACAACAACTGCCGTGAAA+AGG | + | Chr1:97473088-97473107 | None:intergenic | 50.0% | |
| CCATCGAGGCACACGATATT+GGG | + | Chr1:97470382-97470401 | None:intergenic | 50.0% | |
| CTTCCATTTCAAGGCTGGCA+GGG | + | Chr1:97471839-97471858 | None:intergenic | 50.0% | |
| GAAAGAGAGGATGACAGGGT+GGG | - | Chr1:97472043-97472062 | MsG0180005913.01.T01:intron | 50.0% | |
| GGCCCATAAGAAGACTGATG+AGG | - | Chr1:97470773-97470792 | MsG0180005913.01.T01:intron | 50.0% | |
| GGTGGAAACAGTGAATGTGG+TGG | - | Chr1:97470701-97470720 | MsG0180005913.01.T01:intron | 50.0% | |
| TCTTCCATTTCAAGGCTGGC+AGG | + | Chr1:97471840-97471859 | None:intergenic | 50.0% | |
| TGGACCTCGAGGATGATGAT+TGG | - | Chr1:97470721-97470740 | MsG0180005913.01.T01:intron | 50.0% | |
| TTCCATTTCAAGGCTGGCAG+GGG | + | Chr1:97471838-97471857 | None:intergenic | 50.0% | |
| TTGGTTACCTTCGCCACCAA+GGG | - | Chr1:97470740-97470759 | MsG0180005913.01.T01:intron | 50.0% | |
| ! | CCTTTTCACGGCAGTTGTTG+TGG | - | Chr1:97473085-97473104 | MsG0180005913.01.T01:five_prime_UTR | 50.0% |
| AACCCCTGCCAGCCTTGAAA+TGG | - | Chr1:97471833-97471852 | MsG0180005913.01.T01:CDS | 55.0% | |
| AAGAGAGGATGACAGGGTGG+GGG | - | Chr1:97472045-97472064 | MsG0180005913.01.T01:intron | 55.0% | |
| CCCAATATCGTGTGCCTCGA+TGG | - | Chr1:97470379-97470398 | MsG0180005913.01.T01:three_prime_UTR | 55.0% | |
| GGAAAGAGAGGATGACAGGG+TGG | - | Chr1:97472042-97472061 | MsG0180005913.01.T01:intron | 55.0% | |
| TCACCGCCATTATCGCTGTC+TGG | + | Chr1:97470228-97470247 | None:intergenic | 55.0% | |
| TCACTTACGTCGTCCACGGA+AGG | + | Chr1:97471379-97471398 | None:intergenic | 55.0% | |
| !! | AGTGAATGTGGTGGACCTCG+AGG | - | Chr1:97470710-97470729 | MsG0180005913.01.T01:intron | 55.0% |
| GCAGCTGTTGGCCCTCTCTA+AGG | - | Chr1:97473056-97473075 | MsG0180005913.01.T01:intron | 60.0% | |
| AGAGGATGACAGGGTGGGGG+TGG | - | Chr1:97472048-97472067 | MsG0180005913.01.T01:intron | 65.0% | |
| CCTTCGCCACCAAGGGTCAC+CGG | - | Chr1:97470747-97470766 | MsG0180005913.01.T01:intron | 65.0% | |
| GCCACCAAGGGTCACCGGTA+AGG | - | Chr1:97470752-97470771 | MsG0180005913.01.T01:intron | 65.0% | |
| GCCTTACCGGTGACCCTTGG+TGG | + | Chr1:97470756-97470775 | None:intergenic | 65.0% | |
| TGGGCCTTACCGGTGACCCT+TGG | + | Chr1:97470759-97470778 | None:intergenic | 65.0% | |
| !! | CCGGTGACCCTTGGTGGCGA+AGG | + | Chr1:97470750-97470769 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 97470099 | 97473214 | 97470099 | ID=MsG0180005913.01;Name=MsG0180005913.01 |
| Chr1 | mRNA | 97470099 | 97473214 | 97470099 | ID=MsG0180005913.01.T01;Parent=MsG0180005913.01;Name=MsG0180005913.01.T01;_AED=0.49;_eAED=0.53;_QI=139|0.83|0.85|1|0.83|0.71|7|502|255 |
| Chr1 | exon | 97470099 | 97470595 | 97470099 | ID=MsG0180005913.01.T01:exon:19612;Parent=MsG0180005913.01.T01 |
| Chr1 | exon | 97471412 | 97471584 | 97471412 | ID=MsG0180005913.01.T01:exon:19611;Parent=MsG0180005913.01.T01 |
| Chr1 | exon | 97471725 | 97472037 | 97471725 | ID=MsG0180005913.01.T01:exon:19610;Parent=MsG0180005913.01.T01 |
| Chr1 | exon | 97472493 | 97472635 | 97472493 | ID=MsG0180005913.01.T01:exon:19609;Parent=MsG0180005913.01.T01 |
| Chr1 | exon | 97472731 | 97472798 | 97472731 | ID=MsG0180005913.01.T01:exon:19608;Parent=MsG0180005913.01.T01 |
| Chr1 | exon | 97472913 | 97472982 | 97472913 | ID=MsG0180005913.01.T01:exon:19607;Parent=MsG0180005913.01.T01 |
| Chr1 | exon | 97473070 | 97473214 | 97473070 | ID=MsG0180005913.01.T01:exon:19606;Parent=MsG0180005913.01.T01 |
| Chr1 | five_prime_UTR | 97473076 | 97473214 | 97473076 | ID=MsG0180005913.01.T01:five_prime_utr;Parent=MsG0180005913.01.T01 |
| Chr1 | CDS | 97473070 | 97473075 | 97473070 | ID=MsG0180005913.01.T01:cds;Parent=MsG0180005913.01.T01 |
| Chr1 | CDS | 97472913 | 97472982 | 97472913 | ID=MsG0180005913.01.T01:cds;Parent=MsG0180005913.01.T01 |
| Chr1 | CDS | 97472731 | 97472798 | 97472731 | ID=MsG0180005913.01.T01:cds;Parent=MsG0180005913.01.T01 |
| Chr1 | CDS | 97472493 | 97472635 | 97472493 | ID=MsG0180005913.01.T01:cds;Parent=MsG0180005913.01.T01 |
| Chr1 | CDS | 97471725 | 97472037 | 97471725 | ID=MsG0180005913.01.T01:cds;Parent=MsG0180005913.01.T01 |
| Chr1 | CDS | 97471417 | 97471584 | 97471417 | ID=MsG0180005913.01.T01:cds;Parent=MsG0180005913.01.T01 |
| Chr1 | three_prime_UTR | 97471412 | 97471416 | 97471412 | ID=MsG0180005913.01.T01:three_prime_utr;Parent=MsG0180005913.01.T01 |
| Chr1 | three_prime_UTR | 97470099 | 97470595 | 97470099 | ID=MsG0180005913.01.T01:three_prime_utr;Parent=MsG0180005913.01.T01 |
| Gene Sequence |
| Protein sequence |
