Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031053.01.T01 | XP_003603899.1 | 96.887 | 257 | 7 | 1 | 1 | 257 | 52 | 307 | 0 | 517 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031053.01.T01 | O65009 | 48.458 | 227 | 111 | 3 | 31 | 251 | 54 | 280 | 1.49E-74 | 231 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180004596.01 | MsG0680031053.01 | 0.801265 | 9.768014e-49 | 4.644571e-46 |
| MsG0680031053.01 | MsG0780038857.01 | 0.826094 | 3.275291e-54 | 3.041586e-51 |
| MsG0680031053.01 | MsG0780040481.01 | 0.800083 | 1.702348e-48 | 7.855425e-46 |
| MsG0680031053.01 | MsG0880042832.01 | 0.803648 | 3.152923e-49 | 1.592976e-46 |
| MsG0680031053.01 | MsG0880046148.01 | 0.807341 | 5.300092e-50 | 2.944634e-47 |
| MsG0480020958.01 | MsG0680031053.01 | 0.809719 | 1.646867e-50 | 9.741839e-48 |
| MsG0480022301.01 | MsG0680031053.01 | 0.811608 | 6.430333e-51 | 3.998124e-48 |
| MsG0480022530.01 | MsG0680031053.01 | 0.837025 | 6.627766e-57 | 8.501648e-54 |
| MsG0380015796.01 | MsG0680031053.01 | 0.837638 | 4.617993e-57 | 6.036431e-54 |
| MsG0380018026.01 | MsG0680031053.01 | 0.814103 | 1.826942e-51 | 1.214737e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031053.01.T01 | MTR_3g116380 | 96.887 | 257 | 7 | 1 | 1 | 257 | 52 | 307 | 0.0 | 517 |
| MsG0680031053.01.T01 | MTR_3g116410 | 54.911 | 224 | 100 | 1 | 30 | 252 | 52 | 275 | 2.55e-91 | 271 |
| MsG0680031053.01.T01 | MTR_4g069680 | 54.464 | 224 | 101 | 1 | 30 | 252 | 63 | 286 | 1.57e-89 | 267 |
| MsG0680031053.01.T01 | MTR_3g107830 | 51.852 | 243 | 111 | 3 | 16 | 252 | 13 | 255 | 7.01e-88 | 262 |
| MsG0680031053.01.T01 | MTR_4g069040 | 45.852 | 229 | 118 | 4 | 27 | 252 | 284 | 509 | 4.14e-67 | 216 |
| MsG0680031053.01.T01 | MTR_4g069570 | 43.636 | 220 | 118 | 4 | 37 | 253 | 120 | 336 | 9.53e-65 | 205 |
| MsG0680031053.01.T01 | MTR_3g116320 | 42.922 | 219 | 121 | 2 | 36 | 253 | 473 | 688 | 1.45e-62 | 208 |
| MsG0680031053.01.T01 | MTR_3g116270 | 40.639 | 219 | 126 | 2 | 36 | 253 | 291 | 506 | 1.83e-62 | 204 |
| MsG0680031053.01.T01 | MTR_4g069550 | 44.091 | 220 | 117 | 4 | 37 | 253 | 247 | 463 | 6.96e-61 | 199 |
| MsG0680031053.01.T01 | MTR_4g069520 | 43.182 | 220 | 119 | 4 | 37 | 253 | 507 | 723 | 1.56e-58 | 198 |
| MsG0680031053.01.T01 | MTR_4g069520 | 43.182 | 220 | 119 | 4 | 37 | 253 | 493 | 709 | 1.85e-58 | 197 |
| MsG0680031053.01.T01 | MTR_1g008500 | 42.793 | 222 | 121 | 4 | 32 | 251 | 166 | 383 | 2.01e-58 | 190 |
| MsG0680031053.01.T01 | MTR_3g109490 | 42.035 | 226 | 122 | 6 | 31 | 252 | 101 | 321 | 6.62e-54 | 177 |
| MsG0680031053.01.T01 | MTR_1g008530 | 41.589 | 214 | 118 | 5 | 41 | 251 | 13 | 222 | 6.75e-53 | 171 |
| MsG0680031053.01.T01 | MTR_1g008590 | 42.152 | 223 | 119 | 7 | 32 | 251 | 108 | 323 | 7.29e-53 | 174 |
| MsG0680031053.01.T01 | MTR_1g008560 | 41.667 | 228 | 124 | 6 | 29 | 251 | 105 | 328 | 1.04e-52 | 174 |
| MsG0680031053.01.T01 | MTR_0312s0030 | 41.704 | 223 | 120 | 7 | 32 | 251 | 108 | 323 | 2.70e-52 | 173 |
| MsG0680031053.01.T01 | MTR_1g007520 | 41.704 | 223 | 120 | 7 | 32 | 251 | 108 | 323 | 2.70e-52 | 173 |
| MsG0680031053.01.T01 | MTR_1g008510 | 41.364 | 220 | 120 | 5 | 34 | 251 | 112 | 324 | 5.45e-52 | 172 |
| MsG0680031053.01.T01 | MTR_1g008470 | 41.743 | 218 | 120 | 5 | 34 | 250 | 86 | 297 | 1.02e-51 | 171 |
| MsG0680031053.01.T01 | MTR_1g008450 | 39.035 | 228 | 129 | 5 | 24 | 250 | 92 | 310 | 2.76e-49 | 165 |
| MsG0680031053.01.T01 | MTR_6g086530 | 40.513 | 195 | 112 | 4 | 62 | 252 | 11 | 205 | 8.13e-49 | 160 |
| MsG0680031053.01.T01 | MTR_1g008460 | 40.826 | 218 | 119 | 5 | 34 | 250 | 86 | 294 | 1.39e-48 | 162 |
| MsG0680031053.01.T01 | MTR_1g008580 | 42.690 | 171 | 92 | 4 | 83 | 251 | 4 | 170 | 4.46e-43 | 144 |
| MsG0680031053.01.T01 | MTR_5g034320 | 31.984 | 247 | 157 | 4 | 6 | 251 | 391 | 627 | 1.30e-31 | 122 |
| MsG0680031053.01.T01 | MTR_8g064500 | 31.481 | 216 | 144 | 3 | 37 | 251 | 159 | 371 | 2.99e-30 | 116 |
| MsG0680031053.01.T01 | MTR_8g064530 | 32.407 | 216 | 140 | 4 | 37 | 250 | 429 | 640 | 2.52e-29 | 116 |
| MsG0680031053.01.T01 | MTR_8g064560 | 32.870 | 216 | 141 | 3 | 37 | 251 | 412 | 624 | 6.03e-29 | 115 |
| MsG0680031053.01.T01 | MTR_4g068420 | 37.857 | 140 | 65 | 4 | 117 | 253 | 1 | 121 | 1.62e-28 | 105 |
| MsG0680031053.01.T01 | MTR_3g078090 | 31.944 | 216 | 143 | 3 | 37 | 251 | 413 | 625 | 1.10e-27 | 111 |
| MsG0680031053.01.T01 | MTR_5g033350 | 31.633 | 196 | 131 | 2 | 56 | 250 | 5 | 198 | 1.58e-27 | 105 |
| MsG0680031053.01.T01 | MTR_5g033340 | 30.876 | 217 | 146 | 3 | 35 | 250 | 164 | 377 | 2.97e-27 | 108 |
| MsG0680031053.01.T01 | MTR_5g033340 | 30.968 | 155 | 105 | 1 | 80 | 234 | 1 | 153 | 1.24e-18 | 84.7 |
| MsG0680031053.01.T01 | MTR_5g033330 | 29.954 | 217 | 148 | 3 | 35 | 250 | 403 | 616 | 1.95e-24 | 102 |
| MsG0680031053.01.T01 | MTR_5g033330 | 30.846 | 201 | 135 | 3 | 35 | 234 | 195 | 392 | 3.42e-22 | 95.9 |
| MsG0680031053.01.T01 | MTR_5g033330 | 30.556 | 180 | 122 | 2 | 56 | 234 | 7 | 184 | 3.23e-20 | 90.1 |
| MsG0680031053.01.T01 | MTR_4g133840 | 30.303 | 198 | 117 | 5 | 56 | 250 | 7 | 186 | 3.15e-21 | 88.6 |
| MsG0680031053.01.T01 | MTR_8g445170 | 34.615 | 156 | 93 | 5 | 97 | 252 | 237 | 383 | 3.72e-21 | 92.0 |
| MsG0680031053.01.T01 | MTR_8g045890 | 39.286 | 140 | 76 | 5 | 113 | 252 | 301 | 431 | 5.52e-20 | 89.0 |
| MsG0680031053.01.T01 | MTR_8g045890 | 39.286 | 140 | 76 | 5 | 113 | 252 | 342 | 472 | 7.37e-20 | 88.6 |
| MsG0680031053.01.T01 | MTR_8g045890 | 39.286 | 140 | 76 | 5 | 113 | 252 | 379 | 509 | 9.08e-20 | 88.6 |
| MsG0680031053.01.T01 | MTR_8g445140 | 35.000 | 140 | 82 | 5 | 113 | 252 | 172 | 302 | 3.80e-19 | 85.1 |
| MsG0680031053.01.T01 | MTR_2g081610 | 34.043 | 141 | 84 | 5 | 112 | 252 | 128 | 259 | 4.69e-19 | 84.3 |
| MsG0680031053.01.T01 | MTR_8g045880 | 38.571 | 140 | 77 | 5 | 113 | 252 | 184 | 314 | 1.38e-18 | 84.0 |
| MsG0680031053.01.T01 | MTR_8g045880 | 38.571 | 140 | 77 | 5 | 113 | 252 | 219 | 349 | 3.05e-18 | 83.2 |
| MsG0680031053.01.T01 | MTR_8g045880 | 38.571 | 140 | 77 | 5 | 113 | 252 | 221 | 351 | 3.19e-18 | 83.2 |
| MsG0680031053.01.T01 | MTR_5g033360 | 27.189 | 217 | 136 | 4 | 35 | 250 | 25 | 220 | 5.12e-18 | 80.5 |
| MsG0680031053.01.T01 | MTR_8g046000 | 34.416 | 154 | 91 | 6 | 101 | 253 | 79 | 223 | 8.17e-18 | 80.5 |
| MsG0680031053.01.T01 | MTR_1g045860 | 32.653 | 147 | 91 | 5 | 106 | 252 | 121 | 259 | 1.40e-17 | 80.1 |
| MsG0680031053.01.T01 | MTR_2g081590 | 28.899 | 218 | 122 | 9 | 37 | 252 | 73 | 259 | 1.79e-16 | 77.4 |
| MsG0680031053.01.T01 | MTR_8g075930 | 38.824 | 85 | 49 | 2 | 159 | 241 | 4 | 87 | 6.42e-13 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031053.01.T01 | AT1G49320 | 48.458 | 227 | 111 | 3 | 31 | 251 | 52 | 278 | 1.67e-72 | 223 |
| MsG0680031053.01.T01 | AT5G25610 | 42.411 | 224 | 121 | 5 | 31 | 250 | 170 | 389 | 7.99e-56 | 184 |
| MsG0680031053.01.T01 | AT1G70370 | 33.333 | 219 | 136 | 5 | 37 | 251 | 411 | 623 | 5.53e-27 | 109 |
| MsG0680031053.01.T01 | AT1G70370 | 33.333 | 219 | 136 | 5 | 37 | 251 | 411 | 623 | 5.53e-27 | 109 |
| MsG0680031053.01.T01 | AT1G23760 | 32.579 | 221 | 135 | 6 | 37 | 251 | 407 | 619 | 8.50e-26 | 106 |
| MsG0680031053.01.T01 | AT1G60390 | 30.804 | 224 | 141 | 5 | 33 | 250 | 405 | 620 | 1.06e-24 | 103 |
Find 39 sgRNAs with CRISPR-Local
Find 59 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCACATGGATACTTCTAAA+TGG | 0.212561 | 6:-13375996 | MsG0680031053.01.T01:CDS |
| TACTACAATTTCATACAAAA+TGG | 0.266342 | 6:+13376059 | None:intergenic |
| GACTTTGCAAATTACATGTT+TGG | 0.295983 | 6:-13376255 | MsG0680031053.01.T01:CDS |
| CCCTCCTGATAATCTGCTTT+GGG | 0.308335 | 6:-13375905 | MsG0680031053.01.T01:CDS |
| ATTTCAGTTCCAAATGCAAT+AGG | 0.315492 | 6:-13376141 | MsG0680031053.01.T01:CDS |
| AGCAGTTGATGAATCTTTCT+TGG | 0.317340 | 6:+13376473 | None:intergenic |
| TCCCTCCTGATAATCTGCTT+TGG | 0.318544 | 6:-13375906 | MsG0680031053.01.T01:CDS |
| GTTCCAAAGGATTTAAAAGT+TGG | 0.342461 | 6:-13376519 | MsG0680031053.01.T01:CDS |
| TTGTATGAAATTGTAGTAGA+AGG | 0.362661 | 6:-13376054 | MsG0680031053.01.T01:CDS |
| AAGTGTGTATTTCATGGCTT+TGG | 0.373004 | 6:+13376347 | None:intergenic |
| TTGTTCAAGTGTGTATTTCA+TGG | 0.375445 | 6:+13376341 | None:intergenic |
| GGTACCCAAAGCAGATTATC+AGG | 0.389324 | 6:+13375901 | None:intergenic |
| ATTGTAGTAGAAGGTGAAAA+TGG | 0.391681 | 6:-13376045 | MsG0680031053.01.T01:CDS |
| ACAAAATGGTATCACCCTTC+TGG | 0.395540 | 6:+13376073 | None:intergenic |
| AAATTGTGTAATTCTGTAAA+GGG | 0.399598 | 6:+13376178 | None:intergenic |
| TGACATACTGGAGAGTTTCC+AGG | 0.407905 | 6:+13375934 | None:intergenic |
| AAAGTCAAACAAAGACTCTA+AGG | 0.413155 | 6:+13376272 | None:intergenic |
| TGACAATAGAAAACTGCAAA+AGG | 0.418592 | 6:+13376099 | None:intergenic |
| GAAATTGTGTAATTCTGTAA+AGG | 0.428701 | 6:+13376177 | None:intergenic |
| GGGTGACACCCTATTGCATT+TGG | 0.430364 | 6:+13376132 | None:intergenic |
| AGATGGAGAAGAAATCTAGA+AGG | 0.448342 | 6:+13376388 | None:intergenic |
| TCACATGGATACTTCTAAAT+GGG | 0.449148 | 6:-13375995 | MsG0680031053.01.T01:CDS |
| TTTCAGTTCCAAATGCAATA+GGG | 0.450082 | 6:-13376140 | MsG0680031053.01.T01:CDS |
| TATTTCATGGCTTTGGCTTG+TGG | 0.464005 | 6:+13376354 | None:intergenic |
| GAGAAGAAATCTAGAAGGAA+AGG | 0.485932 | 6:+13376393 | None:intergenic |
| CGTGTGCTTAATGTAAAACC+TGG | 0.488283 | 6:-13375952 | MsG0680031053.01.T01:CDS |
| GGAGGGAAGAAATGACATAC+TGG | 0.503691 | 6:+13375922 | None:intergenic |
| CTGCAAAAGGGTAAGGCATA+GGG | 0.513892 | 6:+13376112 | None:intergenic |
| TAGAAAACTGCAAAAGGGTA+AGG | 0.531191 | 6:+13376105 | None:intergenic |
| GACAATAGAAAACTGCAAAA+GGG | 0.537400 | 6:+13376100 | None:intergenic |
| TATTATGGTGTTGCAGTCAA+AGG | 0.559041 | 6:+13375880 | None:intergenic |
| ACTGCAAAAGGGTAAGGCAT+AGG | 0.564319 | 6:+13376111 | None:intergenic |
| AGCTGCAGCAATTTGTCACA+TGG | 0.567177 | 6:-13376010 | MsG0680031053.01.T01:CDS |
| TTTCTATTGTCACAGCCAGA+AGG | 0.572783 | 6:-13376088 | MsG0680031053.01.T01:CDS |
| GTAATTCTGTAAAGGGAGAG+AGG | 0.580516 | 6:+13376185 | None:intergenic |
| TTCTATTGTCACAGCCAGAA+GGG | 0.596892 | 6:-13376087 | MsG0680031053.01.T01:CDS |
| GTAGTAGAAGGTGAAAATGG+AGG | 0.623165 | 6:-13376042 | MsG0680031053.01.T01:CDS |
| CCCAAAGCAGATTATCAGGA+GGG | 0.626212 | 6:+13375905 | None:intergenic |
| ACCCAAAGCAGATTATCAGG+AGG | 0.663331 | 6:+13375904 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGTGTAATTCTGTAAA+GGG | + | Chr6:13376340-13376359 | None:intergenic | 20.0% |
| !! | TACTACAATTTCATACAAAA+TGG | + | Chr6:13376459-13376478 | None:intergenic | 20.0% |
| !! | TCTTTCTTGGAAAAATAAAT+TGG | + | Chr6:13376032-13376051 | None:intergenic | 20.0% |
| !!! | AAAACTTTGAATTTTGAGTT+GGG | + | Chr6:13376287-13376306 | None:intergenic | 20.0% |
| ! | ACAGAAAAAGATGATTTCAA+AGG | - | Chr6:13375929-13375948 | MsG0680031053.01.T01:CDS | 25.0% |
| ! | GAAATTGTGTAATTCTGTAA+AGG | + | Chr6:13376341-13376360 | None:intergenic | 25.0% |
| ! | TTGTATGAAATTGTAGTAGA+AGG | - | Chr6:13376461-13376480 | MsG0680031053.01.T01:CDS | 25.0% |
| !! | TTTCCAACTTTTAAATCCTT+TGG | + | Chr6:13376002-13376021 | None:intergenic | 25.0% |
| !!! | ATTTTGTTAGCTTCTTCTTT+TGG | + | Chr6:13376080-13376099 | None:intergenic | 25.0% |
| !!! | CAAAACTTTGAATTTTGAGT+TGG | + | Chr6:13376288-13376307 | None:intergenic | 25.0% |
| AAAGTCAAACAAAGACTCTA+AGG | + | Chr6:13376246-13376265 | None:intergenic | 30.0% | |
| ATTGTAGTAGAAGGTGAAAA+TGG | - | Chr6:13376470-13376489 | MsG0680031053.01.T01:CDS | 30.0% | |
| ATTTCAGTTCCAAATGCAAT+AGG | - | Chr6:13376374-13376393 | MsG0680031053.01.T01:CDS | 30.0% | |
| GACAATAGAAAACTGCAAAA+GGG | + | Chr6:13376418-13376437 | None:intergenic | 30.0% | |
| GACTTTGCAAATTACATGTT+TGG | - | Chr6:13376260-13376279 | MsG0680031053.01.T01:CDS | 30.0% | |
| GTTCCAAAGGATTTAAAAGT+TGG | - | Chr6:13375996-13376015 | MsG0680031053.01.T01:CDS | 30.0% | |
| TCACATGGATACTTCTAAAT+GGG | - | Chr6:13376520-13376539 | MsG0680031053.01.T01:CDS | 30.0% | |
| TGACAATAGAAAACTGCAAA+AGG | + | Chr6:13376419-13376438 | None:intergenic | 30.0% | |
| TTGTTCAAGTGTGTATTTCA+TGG | + | Chr6:13376177-13376196 | None:intergenic | 30.0% | |
| TTTCAGTTCCAAATGCAATA+GGG | - | Chr6:13376375-13376394 | MsG0680031053.01.T01:CDS | 30.0% | |
| ! | ACAATGCAATTTTGAACCTA+TGG | - | Chr6:13376193-13376212 | MsG0680031053.01.T01:CDS | 30.0% |
| ! | TCTTCTTTTGGTAGGAATTT+TGG | + | Chr6:13376068-13376087 | None:intergenic | 30.0% |
| ! | TTTTACATTAAGCACACGAA+AGG | + | Chr6:13376561-13376580 | None:intergenic | 30.0% |
| !!! | AGAAGGAAAGGTAGTTTTTT+TGG | + | Chr6:13376113-13376132 | None:intergenic | 30.0% |
| AAGTGTGTATTTCATGGCTT+TGG | + | Chr6:13376171-13376190 | None:intergenic | 35.0% | |
| ACGAAAAACACGTTCAATTC+AGG | + | Chr6:13375978-13375997 | None:intergenic | 35.0% | |
| AGATGGAGAAGAAATCTAGA+AGG | + | Chr6:13376130-13376149 | None:intergenic | 35.0% | |
| CGAAAAACACGTTCAATTCA+GGG | + | Chr6:13375977-13375996 | None:intergenic | 35.0% | |
| GAGAAGAAATCTAGAAGGAA+AGG | + | Chr6:13376125-13376144 | None:intergenic | 35.0% | |
| GTCACATGGATACTTCTAAA+TGG | - | Chr6:13376519-13376538 | MsG0680031053.01.T01:CDS | 35.0% | |
| TAGAAAACTGCAAAAGGGTA+AGG | + | Chr6:13376413-13376432 | None:intergenic | 35.0% | |
| ! | AATTTTGTCTCTCCTTCCAT+AGG | + | Chr6:13376212-13376231 | None:intergenic | 35.0% |
| ! | TGCAATTTTGAACCTATGGA+AGG | - | Chr6:13376197-13376216 | MsG0680031053.01.T01:CDS | 35.0% |
| !! | AGCAGTTGATGAATCTTTCT+TGG | + | Chr6:13376045-13376064 | None:intergenic | 35.0% |
| !! | TGTTAGCTTCTTCTTTTGGT+AGG | + | Chr6:13376076-13376095 | None:intergenic | 35.0% |
| !!! | GGTAGTTTTTTTGGTGTGAA+AGG | + | Chr6:13376104-13376123 | None:intergenic | 35.0% |
| !!! | TTGTGGAGAGTTTTTTGAGA+TGG | + | Chr6:13376147-13376166 | None:intergenic | 35.0% |
| ACAAAATGGTATCACCCTTC+TGG | + | Chr6:13376445-13376464 | None:intergenic | 40.0% | |
| CGTGTGCTTAATGTAAAACC+TGG | - | Chr6:13376563-13376582 | MsG0680031053.01.T01:CDS | 40.0% | |
| GTAATTCTGTAAAGGGAGAG+AGG | + | Chr6:13376333-13376352 | None:intergenic | 40.0% | |
| GTAGTAGAAGGTGAAAATGG+AGG | - | Chr6:13376473-13376492 | MsG0680031053.01.T01:CDS | 40.0% | |
| TTCTATTGTCACAGCCAGAA+GGG | - | Chr6:13376428-13376447 | MsG0680031053.01.T01:CDS | 40.0% | |
| TTTCTATTGTCACAGCCAGA+AGG | - | Chr6:13376427-13376446 | MsG0680031053.01.T01:CDS | 40.0% | |
| ! | GAACGTGTTTTTCGTTCCAA+AGG | - | Chr6:13375983-13376002 | MsG0680031053.01.T01:CDS | 40.0% |
| ! | GAGAGAGGATTTTGTGACAT+GGG | + | Chr6:13376318-13376337 | None:intergenic | 40.0% |
| !! | TATTTCATGGCTTTGGCTTG+TGG | + | Chr6:13376164-13376183 | None:intergenic | 40.0% |
| ACCCAAAGCAGATTATCAGG+AGG | + | Chr6:13376614-13376633 | None:intergenic | 45.0% | |
| ACTGCAAAAGGGTAAGGCAT+AGG | + | Chr6:13376407-13376426 | None:intergenic | 45.0% | |
| AGCTGCAGCAATTTGTCACA+TGG | - | Chr6:13376505-13376524 | MsG0680031053.01.T01:CDS | 45.0% | |
| CCCAAAGCAGATTATCAGGA+GGG | + | Chr6:13376613-13376632 | None:intergenic | 45.0% | |
| CCCTCCTGATAATCTGCTTT+GGG | - | Chr6:13376610-13376629 | MsG0680031053.01.T01:CDS | 45.0% | |
| CTGCAAAAGGGTAAGGCATA+GGG | + | Chr6:13376406-13376425 | None:intergenic | 45.0% | |
| GGAGGGAAGAAATGACATAC+TGG | + | Chr6:13376596-13376615 | None:intergenic | 45.0% | |
| GGTACCCAAAGCAGATTATC+AGG | + | Chr6:13376617-13376636 | None:intergenic | 45.0% | |
| TCCCTCCTGATAATCTGCTT+TGG | - | Chr6:13376609-13376628 | MsG0680031053.01.T01:CDS | 45.0% | |
| TGACATACTGGAGAGTTTCC+AGG | + | Chr6:13376584-13376603 | None:intergenic | 45.0% | |
| ! | GGAGAGAGGATTTTGTGACA+TGG | + | Chr6:13376319-13376338 | None:intergenic | 45.0% |
| !! | GGATTTTGTGACATGGGTTG+TGG | + | Chr6:13376312-13376331 | None:intergenic | 45.0% |
| GGGTGACACCCTATTGCATT+TGG | + | Chr6:13376386-13376405 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 13375882 | 13376655 | 13375882 | ID=MsG0680031053.01;Name=MsG0680031053.01 |
| Chr6 | mRNA | 13375882 | 13376655 | 13375882 | ID=MsG0680031053.01.T01;Parent=MsG0680031053.01;Name=MsG0680031053.01.T01;_AED=0.21;_eAED=0.21;_QI=0|-1|0|1|-1|1|1|0|257 |
| Chr6 | exon | 13375882 | 13376655 | 13375882 | ID=MsG0680031053.01.T01:exon:9475;Parent=MsG0680031053.01.T01 |
| Chr6 | CDS | 13375882 | 13376655 | 13375882 | ID=MsG0680031053.01.T01:cds;Parent=MsG0680031053.01.T01 |
| Gene Sequence |
| Protein sequence |
