AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004596.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004596.01.T01 MTR_1g083290 87.375 499 12 3 291 738 351 849 0.0 914
MsG0180004596.01.T01 MTR_1g083290 82.550 298 22 5 1 293 1 273 4.14e-146 450
MsG0180004596.01.T01 MTR_7g113130 74.900 498 73 5 291 738 364 859 0.0 779
MsG0180004596.01.T01 MTR_7g113130 67.752 307 64 8 1 293 1 286 8.15e-113 363
MsG0180004596.01.T01 MTR_7g113130 74.900 498 73 5 291 738 364 859 0.0 778
MsG0180004596.01.T01 MTR_7g113130 67.752 307 64 8 1 293 1 286 4.94e-113 362
MsG0180004596.01.T01 MTR_3g098350 43.184 873 332 17 29 738 10 881 0.0 668
MsG0180004596.01.T01 MTR_3g098380 60.947 507 138 4 291 738 382 887 0.0 661
MsG0180004596.01.T01 MTR_3g098380 39.130 299 129 9 26 292 28 305 2.67e-48 184
MsG0180004596.01.T01 MTR_8g095520 60.040 503 145 4 291 738 361 862 0.0 640
MsG0180004596.01.T01 MTR_8g095520 37.391 345 167 10 49 370 40 358 2.99e-48 184
MsG0180004596.01.T01 MTR_8g099030 59.020 510 136 8 291 733 400 903 0.0 605
MsG0180004596.01.T01 MTR_8g099030 51.099 182 65 3 116 293 162 323 8.25e-41 161
MsG0180004596.01.T01 MTR_3g098320 53.155 523 166 7 291 738 347 865 0.0 571
MsG0180004596.01.T01 MTR_3g098320 36.458 288 139 9 16 292 16 270 5.53e-34 140
MsG0180004596.01.T01 MTR_3g098320 53.155 523 166 7 291 738 356 874 0.0 570
MsG0180004596.01.T01 MTR_3g098320 36.770 291 143 9 16 292 16 279 1.68e-35 145
MsG0180004596.01.T01 MTR_7g113130 76.807 332 49 3 291 598 364 691 0.0 537
MsG0180004596.01.T01 MTR_7g113130 67.752 307 64 8 1 293 1 286 8.20e-115 363
MsG0180004596.01.T01 MTR_2g043900 52.838 511 165 8 291 734 390 891 6.29e-180 539
MsG0180004596.01.T01 MTR_2g043900 38.652 282 110 8 55 293 52 313 1.81e-35 144
MsG0180004596.01.T01 MTR_7g060540 51.473 509 181 8 291 738 310 813 5.25e-174 521
MsG0180004596.01.T01 MTR_7g060540 43.548 186 77 4 116 293 68 233 9.44e-34 139
MsG0180004596.01.T01 MTR_7g060540 51.479 507 186 8 291 738 90 595 6.77e-174 513
MsG0180004596.01.T01 MTR_2g043900 52.033 492 160 8 291 715 390 872 5.33e-168 506
MsG0180004596.01.T01 MTR_2g043900 38.652 282 110 8 55 293 52 313 1.88e-35 144
MsG0180004596.01.T01 MTR_7g060540 52.075 482 171 8 291 713 90 570 4.37e-163 483
MsG0180004596.01.T01 MTR_4g109530 38.347 738 319 13 115 738 64 779 4.46e-163 491
MsG0180004596.01.T01 MTR_7g060540 51.646 486 167 8 291 713 310 790 1.33e-161 487
MsG0180004596.01.T01 MTR_7g060540 43.548 186 77 4 116 293 68 233 9.06e-34 139
MsG0180004596.01.T01 MTR_4g109530 37.657 717 311 13 115 717 79 773 5.28e-151 459
MsG0180004596.01.T01 MTR_2g043900 49.231 455 154 9 291 677 390 835 5.08e-140 432
MsG0180004596.01.T01 MTR_2g043900 38.652 282 110 8 55 293 52 313 1.91e-35 144
MsG0180004596.01.T01 MTR_8g099030 60.883 317 97 5 291 582 400 714 8.46e-131 405
MsG0180004596.01.T01 MTR_8g099030 51.099 182 65 3 116 293 162 323 3.00e-41 161
MsG0180004596.01.T01 MTR_3g098320 54.878 328 108 4 291 579 356 682 2.87e-123 384
MsG0180004596.01.T01 MTR_3g098320 36.770 291 143 9 16 292 16 279 6.83e-36 145
MsG0180004596.01.T01 MTR_3g098320 55.346 318 104 3 291 571 356 672 4.02e-123 384
MsG0180004596.01.T01 MTR_3g098320 36.770 291 143 9 16 292 16 279 6.48e-36 145
MsG0180004596.01.T01 MTR_3g098320 55.346 318 104 3 291 571 347 663 4.12e-123 383
MsG0180004596.01.T01 MTR_3g098320 36.458 288 139 9 16 292 16 270 2.25e-34 140
MsG0180004596.01.T01 MTR_2g028530 28.293 205 119 7 451 640 293 484 2.71e-18 90.1
MsG0180004596.01.T01 MTR_1g100130 25.792 221 119 7 440 642 152 345 4.92e-17 85.5
MsG0180004596.01.T01 MTR_1g100130 25.792 221 119 7 440 642 263 456 1.01e-16 85.1
MsG0180004596.01.T01 MTR_4g105080 24.590 244 141 5 406 634 93 308 2.35e-16 83.6
MsG0180004596.01.T01 MTR_4g105080 24.786 234 133 5 416 634 241 446 1.44e-15 81.3
MsG0180004596.01.T01 MTR_8g028795 25.616 203 109 6 451 635 281 459 4.09e-15 79.7
MsG0180004596.01.T01 MTR_1g100150 24.434 221 122 7 440 642 258 451 3.01e-14 77.0
MsG0180004596.01.T01 MTR_1g113980 84.211 38 5 1 312 349 68 104 1.34e-13 67.8
MsG0180004596.01.T01 MTR_8g031070 24.138 203 112 6 451 635 241 419 6.85e-12 69.3
MsG0180004596.01.T01 MTR_8g028780 24.138 203 112 6 451 635 268 446 2.02e-11 67.8
MsG0180004596.01.T01 MTR_8g028780 24.138 203 112 6 451 635 268 446 2.09e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004596.01.T01 AT5G51060 47.921 866 306 19 15 738 7 869 0.0 768
MsG0180004596.01.T01 AT5G07390 48.058 824 271 14 47 738 36 834 0.0 726
MsG0180004596.01.T01 AT1G09090 67.611 494 112 5 291 738 316 807 0.0 719
MsG0180004596.01.T01 AT1G09090 46.332 259 93 8 41 293 18 236 4.86e-47 180
MsG0180004596.01.T01 AT4G25090 48.525 746 229 12 116 734 80 797 0.0 696
MsG0180004596.01.T01 AT5G07390 46.218 833 305 18 47 738 36 866 0.0 677
MsG0180004596.01.T01 AT4G25090 47.561 738 260 12 116 734 80 809 0.0 677
MsG0180004596.01.T01 AT5G47910 63.636 495 129 6 291 738 395 885 0.0 677
MsG0180004596.01.T01 AT5G47910 41.042 307 124 10 21 292 33 317 2.56e-47 181
MsG0180004596.01.T01 AT1G19230 42.874 856 284 16 55 734 60 886 0.0 626
MsG0180004596.01.T01 AT1G64060 56.974 509 152 8 291 738 406 908 0.0 588
MsG0180004596.01.T01 AT1G64060 36.646 322 115 8 41 293 28 329 1.22e-39 157
MsG0180004596.01.T01 AT5G60010 41.090 752 307 17 116 733 96 845 2.17e-178 533
MsG0180004596.01.T01 AT1G19230 51.272 511 173 7 291 734 411 912 2.42e-172 520
MsG0180004596.01.T01 AT1G19230 33.739 329 136 8 55 321 60 368 3.32e-35 144
MsG0180004596.01.T01 AT4G11230 50.772 518 176 9 293 738 395 905 3.56e-167 506
MsG0180004596.01.T01 AT4G11230 47.312 186 69 4 118 295 159 323 1.11e-33 139
MsG0180004596.01.T01 AT3G45810 38.630 774 321 16 116 738 106 876 2.91e-161 490
MsG0180004596.01.T01 AT1G09090 70.530 302 64 2 291 567 316 617 2.02e-160 478
MsG0180004596.01.T01 AT1G09090 46.332 259 93 8 41 293 18 236 7.89e-48 179
MsG0180004596.01.T01 AT5G49730 29.469 207 110 6 451 636 282 473 1.02e-21 100
MsG0180004596.01.T01 AT5G49730 29.469 207 110 6 451 636 282 473 1.07e-21 100
MsG0180004596.01.T01 AT5G49740 29.439 214 124 7 451 648 291 493 5.33e-21 98.2
MsG0180004596.01.T01 AT5G49740 29.439 214 124 7 451 648 291 493 6.89e-21 98.6
MsG0180004596.01.T01 AT5G49740 29.439 214 124 7 451 648 291 493 8.72e-21 98.2
MsG0180004596.01.T01 AT5G50160 26.160 237 125 6 416 634 61 265 5.66e-18 88.6
MsG0180004596.01.T01 AT5G50160 26.160 237 125 6 416 634 240 444 2.17e-17 87.0
MsG0180004596.01.T01 AT1G01590 28.505 214 107 8 442 635 270 457 3.09e-17 86.7
MsG0180004596.01.T01 AT1G23020 27.586 203 105 6 451 635 300 478 3.78e-17 86.3
MsG0180004596.01.T01 AT1G23020 27.586 203 105 6 451 635 299 477 3.87e-17 86.3
MsG0180004596.01.T01 AT1G23020 27.586 203 105 6 451 635 299 477 3.87e-17 86.3
MsG0180004596.01.T01 AT1G23020 27.586 203 105 6 451 635 277 455 6.09e-17 85.9
MsG0180004596.01.T01 AT1G23020 27.586 203 105 6 451 635 276 454 6.52e-17 85.5
MsG0180004596.01.T01 AT1G23020 27.586 203 105 6 451 635 276 454 6.52e-17 85.5
MsG0180004596.01.T01 AT1G23020 27.586 203 105 6 451 635 273 451 6.95e-17 85.5
MsG0180004596.01.T01 AT1G01580 24.402 209 116 6 451 641 364 548 8.91e-17 85.5
MsG0180004596.01.T01 AT1G01580 24.402 209 116 6 451 641 286 470 1.38e-16 84.7
MsG0180004596.01.T01 AT5G23990 25.506 247 127 7 417 645 196 403 7.40e-16 82.0
MsG0180004596.01.T01 AT5G23990 25.506 247 127 7 417 645 106 313 1.12e-15 81.3
MsG0180004596.01.T01 AT5G23980 24.696 247 136 6 416 647 236 447 1.77e-15 80.9
MsG0180004596.01.T01 AT5G23990 25.820 244 130 7 417 645 238 445 2.61e-15 80.5

Find 177 sgRNAs with CRISPR-Local

Find 387 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCGGCTTCCGGTGATTTC+TGG 0.077195 1:-80128110 None:intergenic
GCTTCGGCTTCGTTGCTTTC+TGG 0.084531 1:-80128177 None:intergenic
TCAAAGCTTTGATCTGTATT+TGG 0.170087 1:-80129542 None:intergenic
AGGAAGAGTTGCGAGAATTT+TGG 0.178663 1:+80129517 MsG0180004596.01.T01:CDS
AATTATTGGTGGTTCGTTAA+AGG 0.240496 1:+80132864 MsG0180004596.01.T01:CDS
CTGACAAGTGACAACTTAAA+TGG 0.241737 1:-80129709 None:intergenic
ACTATTTAGGTGATAGCTTT+TGG 0.241901 1:+80132717 MsG0180004596.01.T01:intron
AGACACCGAAACGGCGTTTC+TGG 0.250511 1:+80128298 MsG0180004596.01.T01:CDS
GTGAGTTTCTTGAGGGGTTT+TGG 0.265957 1:-80132981 None:intergenic
GGTTCGTTTGAATGGTTTAA+AGG 0.272767 1:+80134320 MsG0180004596.01.T01:CDS
TTATAAACATTACGCCAATT+TGG 0.292843 1:-80134527 None:intergenic
TCAATATATCCAAGGTTGTT+TGG 0.300863 1:-80131450 None:intergenic
TGTGGTCATGGTTGTGCTTA+TGG 0.307236 1:+80132905 MsG0180004596.01.T01:CDS
CAGATCAAAGCTTTGATTCA+AGG 0.313985 1:+80129549 MsG0180004596.01.T01:CDS
TCGCAACTCTTCCTTTGTTA+TGG 0.316921 1:-80129508 None:intergenic
CCACTTTGGTCATCATTTGC+TGG 0.324385 1:-80133846 None:intergenic
CACCCGCGAGCTTCGGCTTC+CGG 0.332549 1:-80128120 None:intergenic
AACCTTGGTTTCGTCGTAAT+AGG 0.334498 1:+80132949 MsG0180004596.01.T01:CDS
CTAAGAATTGATGGACCTTA+TGG 0.339430 1:+80134075 MsG0180004596.01.T01:CDS
ATGAAAGACCTGATAATTAT+TGG 0.340393 1:+80132850 MsG0180004596.01.T01:CDS
ACATTCGAACTTTGGGTGAT+TGG 0.346284 1:+80133657 MsG0180004596.01.T01:CDS
CGTTGCTTTCTGGATGCTAA+AGG 0.355423 1:-80128167 None:intergenic
CTTATTGGCCGAAGCACTTA+AGG 0.358195 1:-80131367 None:intergenic
ACGAACCACCAATAATTATC+AGG 0.358413 1:-80132858 None:intergenic
GAACATATACAATGACAAAA+AGG 0.358628 1:-80133034 None:intergenic
CAATATATCCAAGGTTGTTT+GGG 0.365860 1:-80131449 None:intergenic
CATCAAAACGCTTCTCAACT+TGG 0.366463 1:-80128502 None:intergenic
TCCTTTACCTTAGCAAGAAA+TGG 0.371765 1:+80133078 MsG0180004596.01.T01:CDS
AAGCGTTCACATTCGAACTT+TGG 0.372800 1:+80133649 MsG0180004596.01.T01:CDS
TGCAATGCCAGTACATTTCC+CGG 0.373710 1:-80133416 None:intergenic
GAAGCGTCCGTCGTCGCTTT+CGG 0.373980 1:+80128334 MsG0180004596.01.T01:CDS
GTTCGTTTGAATGGTTTAAA+GGG 0.386292 1:+80134321 MsG0180004596.01.T01:CDS
TACAGAAGAAGAAGTAAAAG+AGG 0.396567 1:+80131170 MsG0180004596.01.T01:CDS
GGCTTCAGCGGGCCGCTAAG+TGG 0.401882 1:+80128143 MsG0180004596.01.T01:CDS
AGCGTTCACATTCGAACTTT+GGG 0.412327 1:+80133650 MsG0180004596.01.T01:CDS
TGAAGCCCACCCGCGAGCTT+CGG 0.413046 1:-80128127 None:intergenic
GATTATTGCCTTAAGTGCTT+CGG 0.419075 1:+80131359 MsG0180004596.01.T01:intron
TCTGTGGCGTGTAATAATCT+TGG 0.420991 1:-80132792 None:intergenic
GCGAGCAGGGTTCGTTTGAA+TGG 0.421609 1:+80134312 MsG0180004596.01.T01:intron
CACTGGCTAAATCGAGTCTT+GGG 0.426185 1:-80128548 None:intergenic
GAACAAAAGTGCAAGCTTCA+AGG 0.431531 1:+80128202 MsG0180004596.01.T01:CDS
CTATTGTGTCACCACGGCTA+AGG 0.433727 1:+80131917 MsG0180004596.01.T01:CDS
AGGAGCTGATGTAATAGAAA+AGG 0.435812 1:-80133612 None:intergenic
TCTTGTGCTGGTGCTCCATA+AGG 0.436359 1:-80134090 None:intergenic
ATGCCAAGGCTAAGAATTGA+TGG 0.442152 1:+80134066 MsG0180004596.01.T01:CDS
TGAGGTAGCGGAGAATGATA+AGG 0.445771 1:+80134352 MsG0180004596.01.T01:CDS
TTAGGCACATACCATTCAAA+TGG 0.446242 1:-80133509 None:intergenic
GGTCCAGCTCCTCCATGATA+AGG 0.448687 1:-80131428 None:intergenic
AGCTCGCGGGTGGGCTTCAG+CGG 0.449046 1:+80128131 MsG0180004596.01.T01:CDS
TAGGCACATACCATTCAAAT+GGG 0.451319 1:-80133508 None:intergenic
GCTTGCCAGAAACGCCGTTT+CGG 0.451321 1:-80128303 None:intergenic
TTTGGAATTGCAATTGGGGT+TGG 0.452710 1:+80132735 MsG0180004596.01.T01:CDS
GAACGAGTCAAGGAGTTTGC+TGG 0.457831 1:+80129438 MsG0180004596.01.T01:CDS
CTGTGGCGTGTAATAATCTT+GGG 0.458512 1:-80132791 None:intergenic
ACCATTTCTTGCTAAGGTAA+AGG 0.460848 1:-80133079 None:intergenic
TCTTATACCATTTCTTGCTA+AGG 0.464360 1:-80133085 None:intergenic
CAGATATCTCCCCATTTGAA+TGG 0.464534 1:+80133498 MsG0180004596.01.T01:CDS
CTTCAAGGATGACGGAGAAA+TGG 0.466601 1:+80128217 MsG0180004596.01.T01:CDS
AAGGTTGATAGATCAAAATC+TGG 0.469714 1:+80128416 MsG0180004596.01.T01:CDS
TAAACTAAGACAGGTGTCTC+AGG 0.471090 1:+80128358 MsG0180004596.01.T01:CDS
GGGTTGGACCGGTGTGGTCA+TGG 0.471179 1:+80132893 MsG0180004596.01.T01:CDS
GCTTCAGCGGGCCGCTAAGT+GGG 0.474504 1:+80128144 MsG0180004596.01.T01:CDS
CTTGGTAGGCTTGATTTGCC+TGG 0.478179 1:-80133891 None:intergenic
TGCCCTTATCATGGAGGAGC+TGG 0.478324 1:+80131425 MsG0180004596.01.T01:CDS
GGTCCATCAATTCTTAGCCT+TGG 0.479139 1:-80134069 None:intergenic
AAACAACCTTGGATATATTG+AGG 0.479313 1:+80131452 MsG0180004596.01.T01:CDS
TACGAAGTTCTTCTTCTAGT+AGG 0.479588 1:+80134123 MsG0180004596.01.T01:CDS
CTAAGAGCTGATATGCTACC+AGG 0.483278 1:+80133873 MsG0180004596.01.T01:CDS
AATCCAAGTTGCAGTGTACC+CGG 0.489896 1:+80133397 MsG0180004596.01.T01:intron
AAGTTGATATTGTCATCAAA+TGG 0.490240 1:-80132044 None:intergenic
GCTCGCGGGTGGGCTTCAGC+GGG 0.492949 1:+80128132 MsG0180004596.01.T01:CDS
GTCCAGCTCCTCCATGATAA+GGG 0.494723 1:-80131427 None:intergenic
GCACTGGCTAAATCGAGTCT+TGG 0.494740 1:-80128549 None:intergenic
AAAACCAGTGAGTTTCTTGA+GGG 0.498737 1:-80132988 None:intergenic
GGAATATGCTGCCCTTATCA+TGG 0.499572 1:+80131416 MsG0180004596.01.T01:CDS
GTGATGGTGTTTCTACATAC+AGG 0.507741 1:-80131984 None:intergenic
CAAGAAATGGTATAAGAAAA+CGG 0.507908 1:+80133091 MsG0180004596.01.T01:CDS
TGGAACCACCATTCCAAGCC+TGG 0.508118 1:-80132024 None:intergenic
CTTAGGAGTAGGACCAGGCT+TGG 0.508877 1:+80132011 MsG0180004596.01.T01:CDS
GTTCTTCTTCTAGTAGGACT+AGG 0.509693 1:+80134129 MsG0180004596.01.T01:CDS
AGAAGACTTAGAAGAAGGAG+GGG 0.511195 1:+80134215 MsG0180004596.01.T01:CDS
AGTGTACCCGGGAAATGTAC+TGG 0.514825 1:+80133409 MsG0180004596.01.T01:intron
TATTGTGTCACCACGGCTAA+GGG 0.516732 1:+80131918 MsG0180004596.01.T01:CDS
GGTGCTGCTCGTGCTCTACA+AGG 0.517296 1:+80128437 MsG0180004596.01.T01:CDS
TATACCTCGACGACGTGCTA+AGG 0.520297 1:-80129475 None:intergenic
CAAGAAGAAGACTTAGAAGA+AGG 0.523128 1:+80134210 MsG0180004596.01.T01:CDS
ATCAAAACGCTTCTCAACTT+GGG 0.524127 1:-80128501 None:intergenic
GAAACACCATCACTTGGCTT+AGG 0.524639 1:+80131994 MsG0180004596.01.T01:CDS
AGACTTAGAAGAAGGAGGGG+AGG 0.525285 1:+80134218 MsG0180004596.01.T01:CDS
GACCACACCGGTCCAACCCT+CGG 0.525744 1:-80132889 None:intergenic
GGAGCTGATGTAATAGAAAA+GGG 0.527463 1:-80133611 None:intergenic
AAATAAAATGTAGGATGCCA+AGG 0.528211 1:+80134052 MsG0180004596.01.T01:intron
CACCGGAAGCCGAAGCTCGC+GGG 0.534587 1:+80128118 MsG0180004596.01.T01:CDS
TGCACAAGTGTGTATGAAGA+AGG 0.535781 1:+80134401 MsG0180004596.01.T01:CDS
AGGGGTGATGAATGAGGTAG+CGG 0.541100 1:+80134340 MsG0180004596.01.T01:CDS
TGATTGGACGTCACAACTGA+AGG 0.541866 1:+80133673 MsG0180004596.01.T01:CDS
CGGAAGCCGAAGCTCGCGGG+TGG 0.544071 1:+80128121 MsG0180004596.01.T01:CDS
CATGTTAAACTTGAGCGTCT+CGG 0.548837 1:-80131946 None:intergenic
TCGTTAAAGGAACCGAGGGT+TGG 0.549825 1:+80132877 MsG0180004596.01.T01:CDS
ATAGCCCATGACATGGAAAA+CGG 0.551117 1:-80131898 None:intergenic
AAACGGCGTTTCTGGCAAGC+CGG 0.551405 1:+80128306 MsG0180004596.01.T01:CDS
ACATACAGGCAACAAGATCA+AGG 0.554086 1:-80131970 None:intergenic
TACAAACCTCAATATATCCA+AGG 0.555649 1:-80131458 None:intergenic
TTCGTTTGAATGGTTTAAAG+GGG 0.557889 1:+80134322 MsG0180004596.01.T01:CDS
AAAGGAACCGAGGGTTGGAC+CGG 0.558348 1:+80132882 MsG0180004596.01.T01:CDS
TAAAACCAGTGAGTTTCTTG+AGG 0.558629 1:-80132989 None:intergenic
CAGCTCTTAGAAGACCACTT+TGG 0.560760 1:-80133860 None:intergenic
CCATCACTTGGCTTAGGAGT+AGG 0.564213 1:+80132000 MsG0180004596.01.T01:CDS
TAGGACCAGGCTTGGAATGG+TGG 0.564316 1:+80132019 MsG0180004596.01.T01:CDS
AGGGTGGACAAGAATGCTGA+TGG 0.564553 1:+80131141 MsG0180004596.01.T01:intron
AAGAAGACTTAGAAGAAGGA+GGG 0.564813 1:+80134214 MsG0180004596.01.T01:CDS
GTTTCCGTTCAGAATATTCG+CGG 0.564937 1:+80128272 MsG0180004596.01.T01:CDS
AAAGACCTGATAATTATTGG+TGG 0.565609 1:+80132853 MsG0180004596.01.T01:CDS
CTTCTAGTAGGACTAGGAAT+CGG 0.567489 1:+80134135 MsG0180004596.01.T01:CDS
GAGCTGGACCCAAACAACCT+TGG 0.567715 1:+80131441 MsG0180004596.01.T01:CDS
TGGATGTAGTTTCAGAGACA+AGG 0.568052 1:+80134483 MsG0180004596.01.T01:CDS
AAACCCCTCAAGAAACTCAC+TGG 0.573744 1:+80132984 MsG0180004596.01.T01:CDS
CAAATCTGTGAGGATACTAA+AGG 0.573820 1:+80133296 MsG0180004596.01.T01:CDS
GCTTTCGGCTAAACTAAGAC+AGG 0.576796 1:+80128349 MsG0180004596.01.T01:CDS
GTTTAAAGGGGTGATGAATG+AGG 0.577520 1:+80134334 MsG0180004596.01.T01:CDS
GTAGCGGAGAATGATAAGGA+AGG 0.577707 1:+80134356 MsG0180004596.01.T01:CDS
CTCGGCACCGCCCTTAGCCG+TGG 0.582467 1:-80131928 None:intergenic
TGGTCGGAGCCAGAAATCAC+CGG 0.583482 1:+80128101 MsG0180004596.01.T01:CDS
GAGTAGGACCAGGCTTGGAA+TGG 0.584321 1:+80132016 MsG0180004596.01.T01:CDS
GAAGAAGACTTAGAAGAAGG+AGG 0.587618 1:+80134213 MsG0180004596.01.T01:CDS
TTTGATGAGTTGGCTGTGGA+GGG 0.587990 1:+80128518 MsG0180004596.01.T01:CDS
CTTGGCTTAGGAGTAGGACC+AGG 0.588624 1:+80132006 MsG0180004596.01.T01:CDS
GATTAGGAATGAACGAGTCA+AGG 0.591156 1:+80129428 MsG0180004596.01.T01:intron
TCGCGGTGGAGACACCGAAA+CGG 0.593743 1:+80128289 MsG0180004596.01.T01:CDS
ACGCTTATATAGTCATCTCC+AGG 0.593990 1:-80133632 None:intergenic
ACGACGGACGCTTCTCAAGC+CGG 0.596085 1:-80128325 None:intergenic
GGGTTCATATTCTTCATCTG+TGG 0.596212 1:-80132808 None:intergenic
TCACCGGAAGCCGAAGCTCG+CGG 0.596272 1:+80128117 MsG0180004596.01.T01:CDS
GATGCTAAAGGCCCACTTAG+CGG 0.596865 1:-80128155 None:intergenic
CAAGGATGACGGAGAAATGG+TGG 0.598936 1:+80128220 MsG0180004596.01.T01:CDS
GCATGAAAGAGATGGCCAAA+CGG 0.600274 1:+80129731 MsG0180004596.01.T01:CDS
TGTATGAAGAAGGCGACGCT+CGG 0.602286 1:+80134411 MsG0180004596.01.T01:CDS
AGTTTAGCCGAAAGCGACGA+CGG 0.602465 1:-80128341 None:intergenic
CGAGACGCTCAAGTTTAACA+TGG 0.609198 1:+80131947 MsG0180004596.01.T01:CDS
ATCCAAGTTGCAGTGTACCC+GGG 0.609923 1:+80133398 MsG0180004596.01.T01:intron
TGGTTCGTTAAAGGAACCGA+GGG 0.611360 1:+80132873 MsG0180004596.01.T01:CDS
CAAGGGTTTAAGTACACTAG+TGG 0.613267 1:+80133452 MsG0180004596.01.T01:CDS
AGTGCAAGCTTCAAGGATGA+CGG 0.614121 1:+80128209 MsG0180004596.01.T01:CDS
AGTAGTTGCTTCCATAACAA+AGG 0.614552 1:+80129497 MsG0180004596.01.T01:CDS
AAAACGTTGGAAGTGAAGGT+TGG 0.620114 1:+80128477 MsG0180004596.01.T01:CDS
ACTTGTCAGCATGAAAGAGA+TGG 0.620881 1:+80129723 MsG0180004596.01.T01:CDS
TCTTTGAGTATGCTAATCAA+AGG 0.621357 1:-80134165 None:intergenic
TATGTAGAAACACCATCACT+TGG 0.622762 1:+80131988 MsG0180004596.01.T01:CDS
GAACAAACATGAATCGTGGT+CGG 0.623960 1:+80128085 MsG0180004596.01.T01:CDS
TGACACAATAGCCCATGACA+TGG 0.625098 1:-80131905 None:intergenic
CTAGTGTACTTAAACCCTTG+TGG 0.628502 1:-80133449 None:intergenic
GCAATGCCAGTACATTTCCC+GGG 0.633573 1:-80133415 None:intergenic
GGAAGCCGAAGCTCGCGGGT+GGG 0.635558 1:+80128122 MsG0180004596.01.T01:CDS
GATTGGACGTCACAACTGAA+GGG 0.637531 1:+80133674 MsG0180004596.01.T01:CDS
TTGCATGTGTCTAAACCACA+AGG 0.642211 1:+80133434 MsG0180004596.01.T01:CDS
AAAATTACAAGAACGAGCAG+AGG 0.645722 1:+80131395 MsG0180004596.01.T01:CDS
GTGGTTCGTTAAAGGAACCG+AGG 0.646692 1:+80132872 MsG0180004596.01.T01:CDS
GGATGTAGTTTCAGAGACAA+GGG 0.648790 1:+80134484 MsG0180004596.01.T01:CDS
AGCCTATTACGACGAAACCA+AGG 0.648944 1:-80132951 None:intergenic
TGTGTCACCACGGCTAAGGG+CGG 0.653750 1:+80131921 MsG0180004596.01.T01:CDS
CCTACTCCTAAGCCAAGTGA+TGG 0.654089 1:-80132000 None:intergenic
AAGAGAACAAACATGAATCG+TGG 0.658099 1:+80128081 MsG0180004596.01.T01:CDS
AACCGAGGGTTGGACCGGTG+TGG 0.658523 1:+80132887 MsG0180004596.01.T01:CDS
CCAGCAAATGATGACCAAAG+TGG 0.662394 1:+80133846 MsG0180004596.01.T01:CDS
AGAAATGGTGGAGATAACGT+TGG 0.665615 1:+80128232 MsG0180004596.01.T01:CDS
GATGCCTTAGCACGTCGTCG+AGG 0.676702 1:+80129471 MsG0180004596.01.T01:CDS
TCCGTTCAGAATATTCGCGG+TGG 0.679005 1:+80128275 MsG0180004596.01.T01:CDS
CAGGCAAATCAAGCCTACCA+AGG 0.679852 1:+80133892 MsG0180004596.01.T01:CDS
AAACCAGTGAGTTTCTTGAG+GGG 0.680412 1:-80132987 None:intergenic
TCCACCGCGAATATTCTGAA+CGG 0.684589 1:-80128276 None:intergenic
TGACAATATCAACTTTCACA+AGG 0.691296 1:+80132052 MsG0180004596.01.T01:CDS
TGCATGTGTCTAAACCACAA+GGG 0.711409 1:+80133435 MsG0180004596.01.T01:CDS
AAGCACAACCATGACCACAC+CGG 0.711632 1:-80132901 None:intergenic
AGGCACATACCATTCAAATG+GGG 0.712031 1:-80133507 None:intergenic
CATGGGCTATTGTGTCACCA+CGG 0.732084 1:+80131911 MsG0180004596.01.T01:CDS
ATATGCTGCCCTTATCATGG+AGG 0.734728 1:+80131419 MsG0180004596.01.T01:CDS
GATCTGGCTACAAATCTGTG+AGG 0.758785 1:+80133286 MsG0180004596.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAATTAAAATATAATTTAC+TGG - Chr1:80131563-80131582 None:intergenic 10.0%
!! TTAAACAAAGTTTATTATAT+GGG + Chr1:80130682-80130701 MsG0180004596.01.T01:intron 10.0%
!!! AAAAAAAATCTTATTGTTTT+AGG - Chr1:80132090-80132109 None:intergenic 10.0%
!!! AAAAAAATCTTATTGTTTTA+GGG - Chr1:80132089-80132108 None:intergenic 10.0%
!!! ATATAATAAACTTTGTTTAA+GGG - Chr1:80130682-80130701 None:intergenic 10.0%
!!! TAAAATAACATATTAGATTT+TGG + Chr1:80132614-80132633 MsG0180004596.01.T01:intron 10.0%
!!! TAACATTAAATTTTCTAATA+TGG + Chr1:80131273-80131292 MsG0180004596.01.T01:intron 10.0%
!!! TTTAATGTTAATTTGTTTAA+TGG - Chr1:80131263-80131282 None:intergenic 10.0%
!!! TTTTTTTTTTTGCATATAAA+TGG + Chr1:80128629-80128648 MsG0180004596.01.T01:intron 10.0%
!! AAATAATTCATATACATCAT+CGG - Chr1:80133978-80133997 None:intergenic 15.0%
!! ATCAACTAATTGTAAAAAAA+TGG + Chr1:80130938-80130957 MsG0180004596.01.T01:intron 15.0%
!! CTTAAACAAAGTTTATTATA+TGG + Chr1:80130681-80130700 MsG0180004596.01.T01:intron 15.0%
!! TATTATGAGATTTATATGAA+TGG + Chr1:80130062-80130081 MsG0180004596.01.T01:intron 15.0%
!!! AATTTTTTATTTAGTTCCAT+AGG + Chr1:80130554-80130573 MsG0180004596.01.T01:intron 15.0%
!!! ATAATATTAGTTTTTTTTGG+TGG - Chr1:80129381-80129400 None:intergenic 15.0%
!!! CATATAATAAACTTTGTTTA+AGG - Chr1:80130683-80130702 None:intergenic 15.0%
!!! CTCAATTTTAAATAAAATGT+AGG + Chr1:80134043-80134062 MsG0180004596.01.T01:intron 15.0%
!!! GCTAAGTTTTAAAAAAAAAA+GGG + Chr1:80129257-80129276 MsG0180004596.01.T01:intron 15.0%
!!! TATAAACTTGACAATTTTTT+AGG + Chr1:80132289-80132308 MsG0180004596.01.T01:intron 15.0%
!!! TGCTAAGTTTTAAAAAAAAA+AGG + Chr1:80129256-80129275 MsG0180004596.01.T01:intron 15.0%
!!! TGTAATATTGGATATTTTTA+TGG + Chr1:80130625-80130644 MsG0180004596.01.T01:intron 15.0%
!!! TTATTTTAACAAATGTCTAA+AGG + Chr1:80130275-80130294 MsG0180004596.01.T01:intron 15.0%
!!! TTTTTTTTGACATGTAATAT+TGG + Chr1:80130613-80130632 MsG0180004596.01.T01:intron 15.0%
!! AAGAATTTACAATCGAATTT+AGG - Chr1:80132236-80132255 None:intergenic 20.0%
!! AATGGAGATGATATTATTAT+TGG + Chr1:80130080-80130099 MsG0180004596.01.T01:intron 20.0%
!! ACTAATATAGAATATTGTCA+TGG - Chr1:80130256-80130275 None:intergenic 20.0%
!! ACTAATTGTAAAAAAATGGT+TGG + Chr1:80130942-80130961 MsG0180004596.01.T01:intron 20.0%
!! AGACTTTAATTGAGATAAAA+TGG - Chr1:80128962-80128981 None:intergenic 20.0%
!! AGATGAAAAAACAACTAAAA+TGG - Chr1:80133152-80133171 None:intergenic 20.0%
!! ATATGTATGGTCTATTAATT+AGG + Chr1:80128718-80128737 MsG0180004596.01.T01:intron 20.0%
!! ATGGAGATGATATTATTATT+GGG + Chr1:80130081-80130100 MsG0180004596.01.T01:intron 20.0%
!! ATTTACAAAATTGAAGATGA+AGG - Chr1:80133349-80133368 None:intergenic 20.0%
!! CAAGAAAAATGTTACTATTT+AGG + Chr1:80129096-80129115 MsG0180004596.01.T01:intron 20.0%
!! CTAATATAGAATATTGTCAT+GGG - Chr1:80130255-80130274 None:intergenic 20.0%
!! GGTCATTAAGTTAAAAAAAA+TGG + Chr1:80128670-80128689 MsG0180004596.01.T01:intron 20.0%
!! TAGAAATATGACACAAATTA+AGG + Chr1:80132473-80132492 MsG0180004596.01.T01:intron 20.0%
!! TCAAGACATTTCATTTATAA+TGG + Chr1:80128787-80128806 MsG0180004596.01.T01:intron 20.0%
!! TGCTAAAAAAAACATATGTA+TGG + Chr1:80128705-80128724 MsG0180004596.01.T01:intron 20.0%
!! TGTATACAATATGTAACATT+AGG - Chr1:80130437-80130456 None:intergenic 20.0%
!! TTTACAAAATTGAAGATGAA+GGG - Chr1:80133348-80133367 None:intergenic 20.0%
!!! AAGATTTTGGAACTTAAATT+AGG - Chr1:80133530-80133549 None:intergenic 20.0%
!!! ACACACACTTTATTTTTAAT+CGG - Chr1:80130525-80130544 None:intergenic 20.0%
!!! AGAGCTTATTTTACTTTATT+AGG + Chr1:80132356-80132375 MsG0180004596.01.T01:intron 20.0%
!!! ATATTGGATATTTTTATGGT+TGG + Chr1:80130629-80130648 MsG0180004596.01.T01:intron 20.0%
!!! CAAGTATAAGAATAAGATTT+TGG - Chr1:80133543-80133562 None:intergenic 20.0%
!!! GAGCTATGTTATTTTAAATT+TGG + Chr1:80133738-80133757 MsG0180004596.01.T01:intron 20.0%
!!! TAATTTGTTTAATGGTCAAT+TGG - Chr1:80131255-80131274 None:intergenic 20.0%
!!! TATGTTCTTTTTATCATTCA+TGG + Chr1:80133050-80133069 MsG0180004596.01.T01:CDS 20.0%
!!! TATTTTTCTATGAAATCGAT+AGG + Chr1:80133993-80134012 MsG0180004596.01.T01:intron 20.0%
!!! TTGTAATTTTGATAGCTTAT+TGG - Chr1:80131385-80131404 None:intergenic 20.0%
!!! TTTTTTTCCTCTTACTATTT+AGG + Chr1:80132704-80132723 MsG0180004596.01.T01:intron 20.0%
! AAATGGAACAAAAAACACAT+TGG - Chr1:80133135-80133154 None:intergenic 25.0%
! AAGTTTATGACAAAAAACGT+TGG + Chr1:80128464-80128483 MsG0180004596.01.T01:CDS 25.0%
! AATTAACACTGTTAGGATAT+AGG - Chr1:80129939-80129958 None:intergenic 25.0%
! ACACATTGAATCAATCATAA+TGG - Chr1:80133941-80133960 None:intergenic 25.0%
! ATAATTCTTTCGTTCTCTAT+AGG - Chr1:80130489-80130508 None:intergenic 25.0%
! ATCAATCAATTAACACTGTT+AGG - Chr1:80129946-80129965 None:intergenic 25.0%
! ATCTCATCATATCTCATTAA+TGG - Chr1:80130780-80130799 None:intergenic 25.0%
! ATGAAAGACCTGATAATTAT+TGG + Chr1:80132850-80132869 MsG0180004596.01.T01:CDS 25.0%
! ATTAATTACATTCATCGTCA+TGG + Chr1:80133805-80133824 MsG0180004596.01.T01:intron 25.0%
! CAAGAAATGGTATAAGAAAA+CGG + Chr1:80133091-80133110 MsG0180004596.01.T01:CDS 25.0%
! GAACATATACAATGACAAAA+AGG - Chr1:80133037-80133056 None:intergenic 25.0%
! TGAACATGTTAATTGTTACA+AGG + Chr1:80129965-80129984 MsG0180004596.01.T01:intron 25.0%
! TTATAAACATTACGCCAATT+TGG - Chr1:80134530-80134549 None:intergenic 25.0%
! TTATGTGACATATATAGACA+TGG + Chr1:80133205-80133224 MsG0180004596.01.T01:intron 25.0%
! TTTGATATTGTTCATGATCA+TGG + Chr1:80133781-80133800 MsG0180004596.01.T01:intron 25.0%
!! ATTTTACTTTATTAGGTCAC+TGG + Chr1:80132363-80132382 MsG0180004596.01.T01:intron 25.0%
!! TGGAAGTTCATTTGAAATAA+TGG + Chr1:80128649-80128668 MsG0180004596.01.T01:intron 25.0%
!! TTGTAAAAAAATGGTTGGTT+AGG + Chr1:80130947-80130966 MsG0180004596.01.T01:intron 25.0%
!!! AAGTTGATATTGTCATCAAA+TGG - Chr1:80132047-80132066 None:intergenic 25.0%
!!! AATGTGCATTTAATTTGCAA+TGG - Chr1:80129997-80130016 None:intergenic 25.0%
!!! AGTACAGTATTTTTGACATT+AGG - Chr1:80131073-80131092 None:intergenic 25.0%
!!! ATACTTACCAACTTTTTTTC+AGG - Chr1:80134572-80134591 None:intergenic 25.0%
!!! TAACATTGAATAAGTGTTGA+TGG + Chr1:80130459-80130478 MsG0180004596.01.T01:intron 25.0%
!!! TACTTACCAACTTTTTTTCA+GGG - Chr1:80134571-80134590 None:intergenic 25.0%
!!! TAGAGAACTAGCTTATTTTA+TGG + Chr1:80131782-80131801 MsG0180004596.01.T01:intron 25.0%
!!! TATAAACCTTTTTGATGATC+TGG + Chr1:80133915-80133934 MsG0180004596.01.T01:intron 25.0%
!!! TGAAAAAAAGTTGGTAAGTA+TGG + Chr1:80134571-80134590 MsG0180004596.01.T01:CDS 25.0%
AAAAAGGTTTATACCTTGGT+AGG - Chr1:80133908-80133927 None:intergenic 30.0%
AAACAACCTTGGATATATTG+AGG + Chr1:80131452-80131471 MsG0180004596.01.T01:CDS 30.0%
AAAGACCTGATAATTATTGG+TGG + Chr1:80132853-80132872 MsG0180004596.01.T01:CDS 30.0%
AAAGCAAGCAAAAACAAGAA+GGG + Chr1:80130897-80130916 MsG0180004596.01.T01:intron 30.0%
AAATAAAATGTAGGATGCCA+AGG + Chr1:80134052-80134071 MsG0180004596.01.T01:intron 30.0%
ACTACTTATTACTAAGTGAG+TGG + Chr1:80131229-80131248 MsG0180004596.01.T01:intron 30.0%
ATCTCCAAAAAACTGTTTCA+TGG - Chr1:80132832-80132851 None:intergenic 30.0%
ATGAAGCATAGACTATAACA+TGG - Chr1:80128585-80128604 None:intergenic 30.0%
ATTTAGGCACGTAACAAATA+AGG + Chr1:80129112-80129131 MsG0180004596.01.T01:intron 30.0%
CAATATATCCAAGGTTGTTT+GGG - Chr1:80131452-80131471 None:intergenic 30.0%
CATCAAAAAGGTTTATACCT+TGG - Chr1:80133912-80133931 None:intergenic 30.0%
CGTAACAAATAAGGGTTAAA+TGG + Chr1:80129121-80129140 MsG0180004596.01.T01:intron 30.0%
GAAGTCAATGATTCTTTATG+AGG + Chr1:80132259-80132278 MsG0180004596.01.T01:intron 30.0%
GTATATTGGAGAAAAGTTCA+AGG + Chr1:80132440-80132459 MsG0180004596.01.T01:intron 30.0%
GTTCGTTTGAATGGTTTAAA+GGG + Chr1:80134321-80134340 MsG0180004596.01.T01:CDS 30.0%
GTTTATTTACAAGACACTTG+TGG + Chr1:80131302-80131321 MsG0180004596.01.T01:intron 30.0%
TAAACACCCTGAAAAAAAGT+TGG + Chr1:80134562-80134581 MsG0180004596.01.T01:CDS 30.0%
TAAAGCAAGCAAAAACAAGA+AGG + Chr1:80130896-80130915 MsG0180004596.01.T01:intron 30.0%
TACAAACCTCAATATATCCA+AGG - Chr1:80131461-80131480 None:intergenic 30.0%
TACAGAAGAAGAAGTAAAAG+AGG + Chr1:80131170-80131189 MsG0180004596.01.T01:CDS 30.0%
TCAATATATCCAAGGTTGTT+TGG - Chr1:80131453-80131472 None:intergenic 30.0%
TCACATAACTACAGATAGTA+GGG + Chr1:80131693-80131712 MsG0180004596.01.T01:intron 30.0%
TCTCCAAAAAACTGTTTCAT+GGG - Chr1:80132831-80132850 None:intergenic 30.0%
TCTTATACCATTTCTTGCTA+AGG - Chr1:80133088-80133107 None:intergenic 30.0%
TCTTTGAGTATGCTAATCAA+AGG - Chr1:80134168-80134187 None:intergenic 30.0%
TGAAATGTCTTGAACTCTTA+TGG - Chr1:80128780-80128799 None:intergenic 30.0%
TTCGTTTGAATGGTTTAAAG+GGG + Chr1:80134322-80134341 MsG0180004596.01.T01:CDS 30.0%
TTTAGGCACGTAACAAATAA+GGG + Chr1:80129113-80129132 MsG0180004596.01.T01:intron 30.0%
! AAAGAGCACAATCCTATAAA+CGG + Chr1:80131754-80131773 MsG0180004596.01.T01:intron 30.0%
! AATTATTGGTGGTTCGTTAA+AGG + Chr1:80132864-80132883 MsG0180004596.01.T01:CDS 30.0%
! ACTATTTAGGTGATAGCTTT+TGG + Chr1:80132717-80132736 MsG0180004596.01.T01:intron 30.0%
! TCAAAGCTTTGATCTGTATT+TGG - Chr1:80129545-80129564 None:intergenic 30.0%
! TTAAGGAAGTGTAAACAGAT+TGG + Chr1:80132490-80132509 MsG0180004596.01.T01:intron 30.0%
!! AAGGTTGATAGATCAAAATC+TGG + Chr1:80128416-80128435 MsG0180004596.01.T01:CDS 30.0%
!! TAAGTTGATCAGCTAGAAAA+TGG + Chr1:80131501-80131520 MsG0180004596.01.T01:intron 30.0%
!!! AGAACTAGCTTATTTTATGG+AGG + Chr1:80131785-80131804 MsG0180004596.01.T01:intron 30.0%
!!! ATAGCTTTTGGAATTGCAAT+TGG + Chr1:80132729-80132748 MsG0180004596.01.T01:CDS 30.0%
!!! CTTATTTTATGGAGGACAAT+TGG + Chr1:80131793-80131812 MsG0180004596.01.T01:intron 30.0%
!!! TAGCTTTTGGAATTGCAATT+GGG + Chr1:80132730-80132749 MsG0180004596.01.T01:CDS 30.0%
!!! TCACTGGTTTTAATGCATTT+TGG + Chr1:80133000-80133019 MsG0180004596.01.T01:CDS 30.0%
AAAACCAGTGAGTTTCTTGA+GGG - Chr1:80132991-80133010 None:intergenic 35.0%
AAAATTACAAGAACGAGCAG+AGG + Chr1:80131395-80131414 MsG0180004596.01.T01:CDS 35.0%
AAATTCCAATATTCACCAGC+AGG - Chr1:80130588-80130607 None:intergenic 35.0%
AAGAAGACTTAGAAGAAGGA+GGG + Chr1:80134214-80134233 MsG0180004596.01.T01:CDS 35.0%
AAGAGAACAAACATGAATCG+TGG + Chr1:80128081-80128100 MsG0180004596.01.T01:CDS 35.0%
AATCTAAGTCATAATGCGAG+TGG - Chr1:80132193-80132212 None:intergenic 35.0%
AATTCCAATATTCACCAGCA+GGG - Chr1:80130587-80130606 None:intergenic 35.0%
ACAAAAAACGTTGGAAGTGA+AGG + Chr1:80128473-80128492 MsG0180004596.01.T01:CDS 35.0%
ACCATTTCTTGCTAAGGTAA+AGG - Chr1:80133082-80133101 None:intergenic 35.0%
ACGAACCACCAATAATTATC+AGG - Chr1:80132861-80132880 None:intergenic 35.0%
AGGACAATTGGAAACGTATT+TGG + Chr1:80131805-80131824 MsG0180004596.01.T01:intron 35.0%
AGGAGCTGATGTAATAGAAA+AGG - Chr1:80133615-80133634 None:intergenic 35.0%
AGTAGTTGCTTCCATAACAA+AGG + Chr1:80129497-80129516 MsG0180004596.01.T01:CDS 35.0%
ATAGACATGGATGTATCTTG+CGG + Chr1:80133218-80133237 MsG0180004596.01.T01:intron 35.0%
ATAGGATTGTGCTCTTTAGT+AGG - Chr1:80131751-80131770 None:intergenic 35.0%
ATCAAAACGCTTCTCAACTT+GGG - Chr1:80128504-80128523 None:intergenic 35.0%
ATCTATGCACTACACGTATA+TGG + Chr1:80129041-80129060 MsG0180004596.01.T01:intron 35.0%
CAAATCTGTGAGGATACTAA+AGG + Chr1:80133296-80133315 MsG0180004596.01.T01:CDS 35.0%
CAAGAAGAAGACTTAGAAGA+AGG + Chr1:80134210-80134229 MsG0180004596.01.T01:CDS 35.0%
CTCACATAACTACAGATAGT+AGG + Chr1:80131692-80131711 MsG0180004596.01.T01:intron 35.0%
CTGACAAGTGACAACTTAAA+TGG - Chr1:80129712-80129731 None:intergenic 35.0%
CTGTTAGGATATAGGAAACA+AGG - Chr1:80129931-80129950 None:intergenic 35.0%
GATTATTGCCTTAAGTGCTT+CGG + Chr1:80131359-80131378 MsG0180004596.01.T01:intron 35.0%
GCAACTACAAATTACGCTTA+CGG + Chr1:80128894-80128913 MsG0180004596.01.T01:intron 35.0%
GCACGAGTATTTATTTACCT+TGG - Chr1:80133708-80133727 None:intergenic 35.0%
GCTATCACCTAAATAGTAAG+AGG - Chr1:80132714-80132733 None:intergenic 35.0%
GGAGCTGATGTAATAGAAAA+GGG - Chr1:80133614-80133633 None:intergenic 35.0%
GGGTGTAAATGACAATGATT+AGG + Chr1:80129412-80129431 MsG0180004596.01.T01:intron 35.0%
GGTTCGTTTGAATGGTTTAA+AGG + Chr1:80134320-80134339 MsG0180004596.01.T01:CDS 35.0%
GTCTTCTTACATGCCAAAAA+AGG - Chr1:80129582-80129601 None:intergenic 35.0%
TAAAACCAGTGAGTTTCTTG+AGG - Chr1:80132992-80133011 None:intergenic 35.0%
TAATGGCCAGATCATCAAAA+AGG - Chr1:80133924-80133943 None:intergenic 35.0%
TACGAAGTTCTTCTTCTAGT+AGG + Chr1:80134123-80134142 MsG0180004596.01.T01:CDS 35.0%
TAGGATTGTGCTCTTTAGTA+GGG - Chr1:80131750-80131769 None:intergenic 35.0%
TAGGCACATACCATTCAAAT+GGG - Chr1:80133511-80133530 None:intergenic 35.0%
TATGTAGAAACACCATCACT+TGG + Chr1:80131988-80132007 MsG0180004596.01.T01:CDS 35.0%
TCCTTTACCTTAGCAAGAAA+TGG + Chr1:80133078-80133097 MsG0180004596.01.T01:CDS 35.0%
TTAGGCACATACCATTCAAA+TGG - Chr1:80133512-80133531 None:intergenic 35.0%
TTATGTGTAGCTGTACAACT+TGG + Chr1:80131636-80131655 MsG0180004596.01.T01:intron 35.0%
TTGAATTATGCAACTGAGTG+CGG - Chr1:80129908-80129927 None:intergenic 35.0%
TTTACTTGCAATTTGTCTCC+AGG + Chr1:80133585-80133604 MsG0180004596.01.T01:intron 35.0%
! AACTACATCCACACCATTTT+TGG - Chr1:80134474-80134493 None:intergenic 35.0%
! AAGAGCACAATCCTATAAAC+GGG + Chr1:80131755-80131774 MsG0180004596.01.T01:intron 35.0%
! CAGATCAAAGCTTTGATTCA+AGG + Chr1:80129549-80129568 MsG0180004596.01.T01:CDS 35.0%
! CTAAGAATTGATGGACCTTA+TGG + Chr1:80134075-80134094 MsG0180004596.01.T01:CDS 35.0%
! GTATTTGGATCATAGCTCTA+TGG + Chr1:80131820-80131839 MsG0180004596.01.T01:intron 35.0%
! TTCTCTAAAAGCCCGTTTAT+AGG - Chr1:80131769-80131788 None:intergenic 35.0%
! TTGCACTTTTGTTCTTGCTT+CGG - Chr1:80128196-80128215 None:intergenic 35.0%
! TTTTCTATTACATCAGCTCC+TGG + Chr1:80133614-80133633 MsG0180004596.01.T01:CDS 35.0%
!! ATGGCCAAACGGTTTTATAT+TGG + Chr1:80129742-80129761 MsG0180004596.01.T01:intron 35.0%
!! CATTGAATAAGTGTTGATGG+TGG + Chr1:80130462-80130481 MsG0180004596.01.T01:intron 35.0%
!! CTAACTTCTGGCTTAACATT+TGG - Chr1:80131726-80131745 None:intergenic 35.0%
!! CTTTCATTTTAGCACAACCT+TGG + Chr1:80132934-80132953 MsG0180004596.01.T01:CDS 35.0%
!! CTTTTTGTGGTTGGTACATA+TGG + Chr1:80132158-80132177 MsG0180004596.01.T01:intron 35.0%
!!! AGCTTTTGGAATTGCAATTG+GGG + Chr1:80132731-80132750 MsG0180004596.01.T01:CDS 35.0%
!!! GAACCCATGAAACAGTTTTT+TGG + Chr1:80132825-80132844 MsG0180004596.01.T01:CDS 35.0%
!!! GTCTTTTAAGGCGTTTGATA+AGG + Chr1:80128397-80128416 MsG0180004596.01.T01:CDS 35.0%
!!! TAGTTTTTGTAGTCTTGTGC+TGG - Chr1:80134105-80134124 None:intergenic 35.0%
!!! TCAAGGCTTCAAACCTTTTT+TGG + Chr1:80129566-80129585 MsG0180004596.01.T01:CDS 35.0%
!!! TTACTGGCTCAATTTTGATG+AGG - Chr1:80131547-80131566 None:intergenic 35.0%
AAAACGTTGGAAGTGAAGGT+TGG + Chr1:80128477-80128496 MsG0180004596.01.T01:CDS 40.0%
AAACCAGTGAGTTTCTTGAG+GGG - Chr1:80132990-80133009 None:intergenic 40.0%
AACCAATGTCACAGAAAACC+TGG - Chr1:80130116-80130135 None:intergenic 40.0%
AACCTTGGTTTCGTCGTAAT+AGG + Chr1:80132949-80132968 MsG0180004596.01.T01:CDS 40.0%
AAGCGTTCACATTCGAACTT+TGG + Chr1:80133649-80133668 MsG0180004596.01.T01:CDS 40.0%
AATATACCCTACCATGTCGA+GGG - Chr1:80132427-80132446 None:intergenic 40.0%
ACATACAGGCAACAAGATCA+AGG - Chr1:80131973-80131992 None:intergenic 40.0%
ACATTCGAACTTTGGGTGAT+TGG + Chr1:80133657-80133676 MsG0180004596.01.T01:CDS 40.0%
ACGCTTATATAGTCATCTCC+AGG - Chr1:80133635-80133654 None:intergenic 40.0%
ACTTGTCAGCATGAAAGAGA+TGG + Chr1:80129723-80129742 MsG0180004596.01.T01:CDS 40.0%
AGAAAACTTAGCACTCGACT+TGG - Chr1:80129809-80129828 None:intergenic 40.0%
AGAAGACTTAGAAGAAGGAG+GGG + Chr1:80134215-80134234 MsG0180004596.01.T01:CDS 40.0%
AGCGTTCACATTCGAACTTT+GGG + Chr1:80133650-80133669 MsG0180004596.01.T01:CDS 40.0%
AGGCACATACCATTCAAATG+GGG - Chr1:80133510-80133529 None:intergenic 40.0%
ATAGCCCATGACATGGAAAA+CGG - Chr1:80131901-80131920 None:intergenic 40.0%
ATGCCAAGGCTAAGAATTGA+TGG + Chr1:80134066-80134085 MsG0180004596.01.T01:CDS 40.0%
ATTATTGGGTCATGCTAACC+AGG + Chr1:80130095-80130114 MsG0180004596.01.T01:intron 40.0%
ATTGGTTAGAACGATCATGC+TGG + Chr1:80130129-80130148 MsG0180004596.01.T01:intron 40.0%
CAAGGGTTTAAGTACACTAG+TGG + Chr1:80133452-80133471 MsG0180004596.01.T01:CDS 40.0%
CAGATATCTCCCCATTTGAA+TGG + Chr1:80133498-80133517 MsG0180004596.01.T01:CDS 40.0%
CATCAAAACGCTTCTCAACT+TGG - Chr1:80128505-80128524 None:intergenic 40.0%
CATGTTAAACTTGAGCGTCT+CGG - Chr1:80131949-80131968 None:intergenic 40.0%
CTACTTCGTGCATTTAGATC+TGG + Chr1:80133270-80133289 MsG0180004596.01.T01:intron 40.0%
CTAGTGTACTTAAACCCTTG+TGG - Chr1:80133452-80133471 None:intergenic 40.0%
CTGTGGCGTGTAATAATCTT+GGG - Chr1:80132794-80132813 None:intergenic 40.0%
CTTCTAGTAGGACTAGGAAT+CGG + Chr1:80134135-80134154 MsG0180004596.01.T01:CDS 40.0%
CTTTAGTAGGGACTAACTTC+TGG - Chr1:80131738-80131757 None:intergenic 40.0%
GAACAAACATGAATCGTGGT+CGG + Chr1:80128085-80128104 MsG0180004596.01.T01:CDS 40.0%
GAAGAAGACTTAGAAGAAGG+AGG + Chr1:80134213-80134232 MsG0180004596.01.T01:CDS 40.0%
GACGCCAATATAAAACCGTT+TGG - Chr1:80129749-80129768 None:intergenic 40.0%
GATTAGGAATGAACGAGTCA+AGG + Chr1:80129428-80129447 MsG0180004596.01.T01:intron 40.0%
GCGAGTAACCCAATAGAAAT+AGG - Chr1:80134294-80134313 None:intergenic 40.0%
GCGGTTCCAATGATACTATA+CGG + Chr1:80133237-80133256 MsG0180004596.01.T01:intron 40.0%
GGATGTAGTTTCAGAGACAA+GGG + Chr1:80134484-80134503 MsG0180004596.01.T01:CDS 40.0%
GGGTTCATATTCTTCATCTG+TGG - Chr1:80132811-80132830 None:intergenic 40.0%
GTTCTTCTTCTAGTAGGACT+AGG + Chr1:80134129-80134148 MsG0180004596.01.T01:CDS 40.0%
GTTTAAAGGGGTGATGAATG+AGG + Chr1:80134334-80134353 MsG0180004596.01.T01:CDS 40.0%
GTTTCCGTTCAGAATATTCG+CGG + Chr1:80128272-80128291 MsG0180004596.01.T01:CDS 40.0%
TAAACTAAGACAGGTGTCTC+AGG + Chr1:80128358-80128377 MsG0180004596.01.T01:CDS 40.0%
TAAGTCATAATGCGAGTGGA+AGG - Chr1:80132189-80132208 None:intergenic 40.0%
TCGCAACTCTTCCTTTGTTA+TGG - Chr1:80129511-80129530 None:intergenic 40.0%
TCGCATCCGTATAGTATCAT+TGG - Chr1:80133246-80133265 None:intergenic 40.0%
TCTGTGGCGTGTAATAATCT+TGG - Chr1:80132795-80132814 None:intergenic 40.0%
TGCACAAGTGTGTATGAAGA+AGG + Chr1:80134401-80134420 MsG0180004596.01.T01:CDS 40.0%
TGCATGTGTCTAAACCACAA+GGG + Chr1:80133435-80133454 MsG0180004596.01.T01:CDS 40.0%
TGGATGTAGTTTCAGAGACA+AGG + Chr1:80134483-80134502 MsG0180004596.01.T01:CDS 40.0%
TGTAATAGAAAAGGGATGCC+TGG - Chr1:80133606-80133625 None:intergenic 40.0%
TTATCCCTGCTGGTGAATAT+TGG + Chr1:80130580-80130599 MsG0180004596.01.T01:intron 40.0%
TTGCATGTGTCTAAACCACA+AGG + Chr1:80133434-80133453 MsG0180004596.01.T01:CDS 40.0%
TTTCACTAACGTCTGTAGCA+TGG - Chr1:80129160-80129179 None:intergenic 40.0%
! AACCAGGTTTTCTGTGACAT+TGG + Chr1:80130111-80130130 MsG0180004596.01.T01:intron 40.0%
! AGAAATGGTGGAGATAACGT+TGG + Chr1:80128232-80128251 MsG0180004596.01.T01:CDS 40.0%
! AGGAAGAGTTGCGAGAATTT+TGG + Chr1:80129517-80129536 MsG0180004596.01.T01:CDS 40.0%
! CACATTTTGCTAGGCCAAAT+TGG + Chr1:80134513-80134532 MsG0180004596.01.T01:CDS 40.0%
! GAACAAAAGTGCAAGCTTCA+AGG + Chr1:80128202-80128221 MsG0180004596.01.T01:CDS 40.0%
! GGAAGAGTTGCGAGAATTTT+GGG + Chr1:80129518-80129537 MsG0180004596.01.T01:CDS 40.0%
! GGGTTAAGACACATTTTGCT+AGG + Chr1:80134504-80134523 MsG0180004596.01.T01:CDS 40.0%
! GTGATGGTGTTTCTACATAC+AGG - Chr1:80131987-80132006 None:intergenic 40.0%
! TTTGGAATTGCAATTGGGGT+TGG + Chr1:80132735-80132754 MsG0180004596.01.T01:CDS 40.0%
!! AAGGGTGTCATATATGTGCA+TGG + Chr1:80130915-80130934 MsG0180004596.01.T01:intron 40.0%
!! CAAGCGAGCCTATTTCTATT+GGG + Chr1:80134283-80134302 MsG0180004596.01.T01:intron 40.0%
!! TGACTTGCACTTTTTGTGGT+TGG + Chr1:80132149-80132168 MsG0180004596.01.T01:intron 40.0%
!!! ACCATTTTTGGCATGGTGAA+GGG - Chr1:80134462-80134481 None:intergenic 40.0%
!!! TGAGAAGCGTTTTGATGAGT+TGG + Chr1:80128508-80128527 MsG0180004596.01.T01:CDS 40.0%
!!! TGCTTGACTTGCACTTTTTG+TGG + Chr1:80132145-80132164 MsG0180004596.01.T01:intron 40.0%
AAACCCCTCAAGAAACTCAC+TGG + Chr1:80132984-80133003 MsG0180004596.01.T01:CDS 45.0%
AACGATCATGCTGGTGTTTC+TGG + Chr1:80130138-80130157 MsG0180004596.01.T01:intron 45.0%
AATCCAAGTTGCAGTGTACC+CGG + Chr1:80133397-80133416 MsG0180004596.01.T01:intron 45.0%
ACATGGACATACCTATGCAC+TGG - Chr1:80128568-80128587 None:intergenic 45.0%
ACGATCATGCTGGTGTTTCT+GGG + Chr1:80130139-80130158 MsG0180004596.01.T01:intron 45.0%
ACTCGATTTAGCCAGTGCAT+AGG + Chr1:80128554-80128573 MsG0180004596.01.T01:intron 45.0%
AGCCTATTACGACGAAACCA+AGG - Chr1:80132954-80132973 None:intergenic 45.0%
AGTGCAAGCTTCAAGGATGA+CGG + Chr1:80128209-80128228 MsG0180004596.01.T01:CDS 45.0%
ATATACCCTACCATGTCGAG+GGG - Chr1:80132426-80132445 None:intergenic 45.0%
ATATGCTGCCCTTATCATGG+AGG + Chr1:80131419-80131438 MsG0180004596.01.T01:CDS 45.0%
CAATATACCCTACCATGTCG+AGG - Chr1:80132428-80132447 None:intergenic 45.0%
CAGCTCTTAGAAGACCACTT+TGG - Chr1:80133863-80133882 None:intergenic 45.0%
CCAATAGAAATAGGCTCGCT+TGG - Chr1:80134285-80134304 None:intergenic 45.0%
CCACTTTGGTCATCATTTGC+TGG - Chr1:80133849-80133868 None:intergenic 45.0%
CCAGCAAATGATGACCAAAG+TGG + Chr1:80133846-80133865 MsG0180004596.01.T01:CDS 45.0%
CCAGCAGGGATAATTTCCTA+TGG - Chr1:80130573-80130592 None:intergenic 45.0%
CCATAGGAAATTATCCCTGC+TGG + Chr1:80130570-80130589 MsG0180004596.01.T01:intron 45.0%
CGAGACGCTCAAGTTTAACA+TGG + Chr1:80131947-80131966 MsG0180004596.01.T01:CDS 45.0%
CTAAGAGCTGATATGCTACC+AGG + Chr1:80133873-80133892 MsG0180004596.01.T01:CDS 45.0%
CTCGACATGGTAGGGTATAT+TGG + Chr1:80132426-80132445 MsG0180004596.01.T01:intron 45.0%
GAAACACCATCACTTGGCTT+AGG + Chr1:80131994-80132013 MsG0180004596.01.T01:CDS 45.0%
GATCTGGCTACAAATCTGTG+AGG + Chr1:80133286-80133305 MsG0180004596.01.T01:intron 45.0%
GATTGGACGTCACAACTGAA+GGG + Chr1:80133674-80133693 MsG0180004596.01.T01:CDS 45.0%
GCATGAAAGAGATGGCCAAA+CGG + Chr1:80129731-80129750 MsG0180004596.01.T01:CDS 45.0%
GCTTTCGGCTAAACTAAGAC+AGG + Chr1:80128349-80128368 MsG0180004596.01.T01:CDS 45.0%
GGAATATGCTGCCCTTATCA+TGG + Chr1:80131416-80131435 MsG0180004596.01.T01:CDS 45.0%
GGTCCATCAATTCTTAGCCT+TGG - Chr1:80134072-80134091 None:intergenic 45.0%
GTATGCATGCATGCATGTCT+AGG + Chr1:80128983-80129002 MsG0180004596.01.T01:intron 45.0%
GTTATGTGAGCTGATTGTGC+TGG - Chr1:80131682-80131701 None:intergenic 45.0%
TATTGTGTCACCACGGCTAA+GGG + Chr1:80131918-80131937 MsG0180004596.01.T01:CDS 45.0%
TCACCATGCCAAAAATGGTG+TGG + Chr1:80134463-80134482 MsG0180004596.01.T01:CDS 45.0%
TCCACCGCGAATATTCTGAA+CGG - Chr1:80128279-80128298 None:intergenic 45.0%
TCCCTTCACCATGCCAAAAA+TGG + Chr1:80134458-80134477 MsG0180004596.01.T01:CDS 45.0%
TGACACAATAGCCCATGACA+TGG - Chr1:80131908-80131927 None:intergenic 45.0%
TGATTGGACGTCACAACTGA+AGG + Chr1:80133673-80133692 MsG0180004596.01.T01:CDS 45.0%
TGCAATGCCAGTACATTTCC+CGG - Chr1:80133419-80133438 None:intergenic 45.0%
TGGTTCGTTAAAGGAACCGA+GGG + Chr1:80132873-80132892 MsG0180004596.01.T01:CDS 45.0%
TGTGGTCATGGTTGTGCTTA+TGG + Chr1:80132905-80132924 MsG0180004596.01.T01:CDS 45.0%
TTCATCGTCATGGTTTACGC+AGG + Chr1:80133815-80133834 MsG0180004596.01.T01:intron 45.0%
! CACTGGCTAAATCGAGTCTT+GGG - Chr1:80128551-80128570 None:intergenic 45.0%
! CGTTGCTTTCTGGATGCTAA+AGG - Chr1:80128170-80128189 None:intergenic 45.0%
! CTTATTGGCCGAAGCACTTA+AGG - Chr1:80131370-80131389 None:intergenic 45.0%
! GAAGCGCATGACGTCTTTTA+AGG + Chr1:80128385-80128404 MsG0180004596.01.T01:CDS 45.0%
! GTAGCGGAGAATGATAAGGA+AGG + Chr1:80134356-80134375 MsG0180004596.01.T01:CDS 45.0%
! GTGAGTTTCTTGAGGGGTTT+TGG - Chr1:80132984-80133003 None:intergenic 45.0%
! TTTGATGAGTTGGCTGTGGA+GGG + Chr1:80128518-80128537 MsG0180004596.01.T01:CDS 45.0%
! TTTGCGCAGCACTTTTCACT+TGG + Chr1:80131850-80131869 MsG0180004596.01.T01:intron 45.0%
!! CCAAGCGAGCCTATTTCTAT+TGG + Chr1:80134282-80134301 MsG0180004596.01.T01:intron 45.0%
!! CTTCAAGGATGACGGAGAAA+TGG + Chr1:80128217-80128236 MsG0180004596.01.T01:CDS 45.0%
!! TGAGGTAGCGGAGAATGATA+AGG + Chr1:80134352-80134371 MsG0180004596.01.T01:CDS 45.0%
!! TTTTGATGAGTTGGCTGTGG+AGG + Chr1:80128517-80128536 MsG0180004596.01.T01:CDS 45.0%
!!! ACTGAAGGGTATTTTCGCCA+AGG + Chr1:80133688-80133707 MsG0180004596.01.T01:CDS 45.0%
!!! CACCATTTTTGGCATGGTGA+AGG - Chr1:80134463-80134482 None:intergenic 45.0%
!!! CATCCACACCATTTTTGGCA+TGG - Chr1:80134469-80134488 None:intergenic 45.0%
!!! GTTTCTTGAGGGGTTTTGGA+AGG - Chr1:80132980-80132999 None:intergenic 45.0%
!!! AAAATAATATTAGTTTTTTT+TGG - Chr1:80129384-80129403 None:intergenic 5.0%
!!! AAAATTTACATTATTTTATT+AGG + Chr1:80130321-80130340 MsG0180004596.01.T01:intron 5.0%
!!! ACTAATATTATTTTTTTATT+TGG + Chr1:80129390-80129409 MsG0180004596.01.T01:intron 5.0%
!!! CTAATATTATTTTTTTATTT+GGG + Chr1:80129391-80129410 MsG0180004596.01.T01:intron 5.0%
!!! TAATATTATTTTTTTATTTG+GGG + Chr1:80129392-80129411 MsG0180004596.01.T01:intron 5.0%
AAACGGCACGACGTTTGTAC+TGG - Chr1:80131884-80131903 None:intergenic 50.0%
AAATAGCCCCTCGACATGGT+AGG + Chr1:80132417-80132436 MsG0180004596.01.T01:intron 50.0%
AAGCACAACCATGACCACAC+CGG - Chr1:80132904-80132923 None:intergenic 50.0%
AATAGCCCCTCGACATGGTA+GGG + Chr1:80132418-80132437 MsG0180004596.01.T01:intron 50.0%
AGACTTAGAAGAAGGAGGGG+AGG + Chr1:80134218-80134237 MsG0180004596.01.T01:CDS 50.0%
AGGGGTGATGAATGAGGTAG+CGG + Chr1:80134340-80134359 MsG0180004596.01.T01:CDS 50.0%
AGGGTGGACAAGAATGCTGA+TGG + Chr1:80131141-80131160 MsG0180004596.01.T01:intron 50.0%
AGTGTACCCGGGAAATGTAC+TGG + Chr1:80133409-80133428 MsG0180004596.01.T01:intron 50.0%
AGTTTAGCCGAAAGCGACGA+CGG - Chr1:80128344-80128363 None:intergenic 50.0%
ATCAGCATTCTTGTCCACCC+TGG - Chr1:80131142-80131161 None:intergenic 50.0%
ATCCAAGTTGCAGTGTACCC+GGG + Chr1:80133398-80133417 MsG0180004596.01.T01:intron 50.0%
CAGGCAAATCAAGCCTACCA+AGG + Chr1:80133892-80133911 MsG0180004596.01.T01:CDS 50.0%
CATGTCGAGGGGCTATTTGT+GGG - Chr1:80132415-80132434 None:intergenic 50.0%
CCATCACTTGGCTTAGGAGT+AGG + Chr1:80132000-80132019 MsG0180004596.01.T01:CDS 50.0%
CCTACTCCTAAGCCAAGTGA+TGG - Chr1:80132003-80132022 None:intergenic 50.0%
CTATTGTGTCACCACGGCTA+AGG + Chr1:80131917-80131936 MsG0180004596.01.T01:CDS 50.0%
GAACGAGTCAAGGAGTTTGC+TGG + Chr1:80129438-80129457 MsG0180004596.01.T01:CDS 50.0%
GATGCTAAAGGCCCACTTAG+CGG - Chr1:80128158-80128177 None:intergenic 50.0%
GCAATGCCAGTACATTTCCC+GGG - Chr1:80133418-80133437 None:intergenic 50.0%
GTCCAGCTCCTCCATGATAA+GGG - Chr1:80131430-80131449 None:intergenic 50.0%
GTGGTTCGTTAAAGGAACCG+AGG + Chr1:80132872-80132891 MsG0180004596.01.T01:CDS 50.0%
TAGGCTCGCTTGGTTGCAAA+AGG - Chr1:80134275-80134294 None:intergenic 50.0%
TATACCTCGACGACGTGCTA+AGG - Chr1:80129478-80129497 None:intergenic 50.0%
TATTGGGTTACTCGCGAGCA+GGG + Chr1:80134299-80134318 MsG0180004596.01.T01:intron 50.0%
TCAGCATTCTTGTCCACCCT+GGG - Chr1:80131141-80131160 None:intergenic 50.0%
TCCGTTCAGAATATTCGCGG+TGG + Chr1:80128275-80128294 MsG0180004596.01.T01:CDS 50.0%
TCGTTAAAGGAACCGAGGGT+TGG + Chr1:80132877-80132896 MsG0180004596.01.T01:CDS 50.0%
TGTATGAAGAAGGCGACGCT+CGG + Chr1:80134411-80134430 MsG0180004596.01.T01:CDS 50.0%
! CATGGGCTATTGTGTCACCA+CGG + Chr1:80131911-80131930 MsG0180004596.01.T01:CDS 50.0%
! TCTTGTGCTGGTGCTCCATA+AGG - Chr1:80134093-80134112 None:intergenic 50.0%
!! CAAGGATGACGGAGAAATGG+TGG + Chr1:80128220-80128239 MsG0180004596.01.T01:CDS 50.0%
!! CTTGGTAGGCTTGATTTGCC+TGG - Chr1:80133894-80133913 None:intergenic 50.0%
!! GCACTGGCTAAATCGAGTCT+TGG - Chr1:80128552-80128571 None:intergenic 50.0%
!! GCGTTTTGATGAGTTGGCTG+TGG + Chr1:80128514-80128533 MsG0180004596.01.T01:CDS 50.0%
!! GGTCACTGGTGCTATCAACA+CGG + Chr1:80132377-80132396 MsG0180004596.01.T01:intron 50.0%
!!! CGTGCCGTTTTCCATGTCAT+GGG + Chr1:80131894-80131913 MsG0180004596.01.T01:CDS 50.0%
!!! TCGTGCCGTTTTCCATGTCA+TGG + Chr1:80131893-80131912 MsG0180004596.01.T01:CDS 50.0%
AAAGGAACCGAGGGTTGGAC+CGG + Chr1:80132882-80132901 MsG0180004596.01.T01:CDS 55.0%
AGACACCGAAACGGCGTTTC+TGG + Chr1:80128298-80128317 MsG0180004596.01.T01:CDS 55.0%
CCACAAATAGCCCCTCGACA+TGG + Chr1:80132413-80132432 MsG0180004596.01.T01:intron 55.0%
CCATGTCGAGGGGCTATTTG+TGG - Chr1:80132416-80132435 None:intergenic 55.0%
CTATTGGGTTACTCGCGAGC+AGG + Chr1:80134298-80134317 MsG0180004596.01.T01:intron 55.0%
CTTAGAAGAAGGAGGGGAGG+TGG + Chr1:80134221-80134240 MsG0180004596.01.T01:intron 55.0%
CTTAGGAGTAGGACCAGGCT+TGG + Chr1:80132011-80132030 MsG0180004596.01.T01:CDS 55.0%
CTTCGGCTTCCGGTGATTTC+TGG - Chr1:80128113-80128132 None:intergenic 55.0%
CTTGGCTTAGGAGTAGGACC+AGG + Chr1:80132006-80132025 MsG0180004596.01.T01:CDS 55.0%
GAGCTGGACCCAAACAACCT+TGG + Chr1:80131441-80131460 MsG0180004596.01.T01:CDS 55.0%
GAGTAGGACCAGGCTTGGAA+TGG + Chr1:80132016-80132035 MsG0180004596.01.T01:CDS 55.0%
GCGAGCAGGGTTCGTTTGAA+TGG + Chr1:80134312-80134331 MsG0180004596.01.T01:intron 55.0%
GCTTGCCAGAAACGCCGTTT+CGG - Chr1:80128306-80128325 None:intergenic 55.0%
GGTCCAGCTCCTCCATGATA+AGG - Chr1:80131431-80131450 None:intergenic 55.0%
TAGGACCAGGCTTGGAATGG+TGG + Chr1:80132019-80132038 MsG0180004596.01.T01:CDS 55.0%
TCGAGGGGCTATTTGTGGGT+TGG - Chr1:80132411-80132430 None:intergenic 55.0%
TCTTGTCCACCCTGGGATAG+TGG - Chr1:80131134-80131153 None:intergenic 55.0%
TGCCCTTATCATGGAGGAGC+TGG + Chr1:80131425-80131444 MsG0180004596.01.T01:CDS 55.0%
TGGAACCACCATTCCAAGCC+TGG - Chr1:80132027-80132046 None:intergenic 55.0%
TGGTCGGAGCCAGAAATCAC+CGG + Chr1:80128101-80128120 MsG0180004596.01.T01:CDS 55.0%
TTCCCGGGTACACTGCAACT+TGG - Chr1:80133403-80133422 None:intergenic 55.0%
! ACTCGTGTGCCACTATCCCA+GGG + Chr1:80131122-80131141 MsG0180004596.01.T01:intron 55.0%
! GCTTCGGCTTCGTTGCTTTC+TGG - Chr1:80128180-80128199 None:intergenic 55.0%
!! AAACGGCGTTTCTGGCAAGC+CGG + Chr1:80128306-80128325 MsG0180004596.01.T01:CDS 55.0%
!! GCTATTTGTGGGTTGGTGCG+TGG - Chr1:80132404-80132423 None:intergenic 55.0%
ACGACGGACGCTTCTCAAGC+CGG - Chr1:80128328-80128347 None:intergenic 60.0%
GATGCCTTAGCACGTCGTCG+AGG + Chr1:80129471-80129490 MsG0180004596.01.T01:CDS 60.0%
TCGCGGTGGAGACACCGAAA+CGG + Chr1:80128289-80128308 MsG0180004596.01.T01:CDS 60.0%
TGTGTCACCACGGCTAAGGG+CGG + Chr1:80131921-80131940 MsG0180004596.01.T01:CDS 60.0%
! CACTCGTGTGCCACTATCCC+AGG + Chr1:80131121-80131140 MsG0180004596.01.T01:intron 60.0%
! GAAGCGTCCGTCGTCGCTTT+CGG + Chr1:80128334-80128353 MsG0180004596.01.T01:CDS 60.0%
!! GGTGCTGCTCGTGCTCTACA+AGG + Chr1:80128437-80128456 MsG0180004596.01.T01:CDS 60.0%
AACCGAGGGTTGGACCGGTG+TGG + Chr1:80132887-80132906 MsG0180004596.01.T01:CDS 65.0%
GACCACACCGGTCCAACCCT+CGG - Chr1:80132892-80132911 None:intergenic 65.0%
GCTTCAGCGGGCCGCTAAGT+GGG + Chr1:80128144-80128163 MsG0180004596.01.T01:CDS 65.0%
GGGTTGGACCGGTGTGGTCA+TGG + Chr1:80132893-80132912 MsG0180004596.01.T01:CDS 65.0%
TCACCGGAAGCCGAAGCTCG+CGG + Chr1:80128117-80128136 MsG0180004596.01.T01:CDS 65.0%
TGAAGCCCACCCGCGAGCTT+CGG - Chr1:80128130-80128149 None:intergenic 65.0%
! CGTGTGCCACTATCCCAGGG+TGG + Chr1:80131125-80131144 MsG0180004596.01.T01:intron 65.0%
CACCCGCGAGCTTCGGCTTC+CGG - Chr1:80128123-80128142 None:intergenic 70.0%
CACCGGAAGCCGAAGCTCGC+GGG + Chr1:80128118-80128137 MsG0180004596.01.T01:CDS 70.0%
GGAAGCCGAAGCTCGCGGGT+GGG + Chr1:80128122-80128141 MsG0180004596.01.T01:CDS 70.0%
GGCTTCAGCGGGCCGCTAAG+TGG + Chr1:80128143-80128162 MsG0180004596.01.T01:CDS 70.0%
! AGCTCGCGGGTGGGCTTCAG+CGG + Chr1:80128131-80128150 MsG0180004596.01.T01:CDS 70.0%
CGGAAGCCGAAGCTCGCGGG+TGG + Chr1:80128121-80128140 MsG0180004596.01.T01:CDS 75.0%
CTCGGCACCGCCCTTAGCCG+TGG - Chr1:80131931-80131950 None:intergenic 75.0%
! GCTCGCGGGTGGGCTTCAGC+GGG + Chr1:80128132-80128151 MsG0180004596.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 80128071 80134610 80128071 ID=MsG0180004596.01;Name=MsG0180004596.01
Chr1 mRNA 80128071 80134610 80128071 ID=MsG0180004596.01.T01;Parent=MsG0180004596.01;Name=MsG0180004596.01.T01;_AED=0.31;_eAED=0.32;_QI=0|0.41|0.46|1|1|1|13|0|746
Chr1 exon 80128071 80128567 80128071 ID=MsG0180004596.01.T01:exon:45745;Parent=MsG0180004596.01.T01
Chr1 exon 80129434 80129591 80129434 ID=MsG0180004596.01.T01:exon:45746;Parent=MsG0180004596.01.T01
Chr1 exon 80129692 80129752 80129692 ID=MsG0180004596.01.T01:exon:45747;Parent=MsG0180004596.01.T01
Chr1 exon 80131143 80131191 80131143 ID=MsG0180004596.01.T01:exon:45748;Parent=MsG0180004596.01.T01
Chr1 exon 80131360 80131473 80131360 ID=MsG0180004596.01.T01:exon:45749;Parent=MsG0180004596.01.T01
Chr1 exon 80131885 80132073 80131885 ID=MsG0180004596.01.T01:exon:45750;Parent=MsG0180004596.01.T01
Chr1 exon 80132726 80133112 80132726 ID=MsG0180004596.01.T01:exon:45751;Parent=MsG0180004596.01.T01
Chr1 exon 80133287 80133317 80133287 ID=MsG0180004596.01.T01:exon:45752;Parent=MsG0180004596.01.T01
Chr1 exon 80133411 80133519 80133411 ID=MsG0180004596.01.T01:exon:45753;Parent=MsG0180004596.01.T01
Chr1 exon 80133607 80133709 80133607 ID=MsG0180004596.01.T01:exon:45754;Parent=MsG0180004596.01.T01
Chr1 exon 80133837 80133913 80133837 ID=MsG0180004596.01.T01:exon:45755;Parent=MsG0180004596.01.T01
Chr1 exon 80134065 80134239 80134065 ID=MsG0180004596.01.T01:exon:45756;Parent=MsG0180004596.01.T01
Chr1 exon 80134320 80134610 80134320 ID=MsG0180004596.01.T01:exon:45757;Parent=MsG0180004596.01.T01
Chr1 CDS 80128071 80128567 80128071 ID=MsG0180004596.01.T01:cds;Parent=MsG0180004596.01.T01
Chr1 CDS 80129434 80129591 80129434 ID=MsG0180004596.01.T01:cds;Parent=MsG0180004596.01.T01
Chr1 CDS 80129692 80129752 80129692 ID=MsG0180004596.01.T01:cds;Parent=MsG0180004596.01.T01
Chr1 CDS 80131143 80131191 80131143 ID=MsG0180004596.01.T01:cds;Parent=MsG0180004596.01.T01
Chr1 CDS 80131360 80131473 80131360 ID=MsG0180004596.01.T01:cds;Parent=MsG0180004596.01.T01
Chr1 CDS 80131885 80132073 80131885 ID=MsG0180004596.01.T01:cds;Parent=MsG0180004596.01.T01
Chr1 CDS 80132726 80133112 80132726 ID=MsG0180004596.01.T01:cds;Parent=MsG0180004596.01.T01
Chr1 CDS 80133287 80133317 80133287 ID=MsG0180004596.01.T01:cds;Parent=MsG0180004596.01.T01
Chr1 CDS 80133411 80133519 80133411 ID=MsG0180004596.01.T01:cds;Parent=MsG0180004596.01.T01
Chr1 CDS 80133607 80133709 80133607 ID=MsG0180004596.01.T01:cds;Parent=MsG0180004596.01.T01
Chr1 CDS 80133837 80133913 80133837 ID=MsG0180004596.01.T01:cds;Parent=MsG0180004596.01.T01
Chr1 CDS 80134065 80134239 80134065 ID=MsG0180004596.01.T01:cds;Parent=MsG0180004596.01.T01
Chr1 CDS 80134320 80134610 80134320 ID=MsG0180004596.01.T01:cds;Parent=MsG0180004596.01.T01
Gene Sequence

>MsG0180004596.01.T01

ATGGAAATTCAAGAGAACAAACATGAATCGTGGTCGGAGCCAGAAATCACCGGAAGCCGAAGCTCGCGGGTGGGCTTCAGCGGGCCGCTAAGTGGGCCTTTAGCATCCAGAAAGCAACGAAGCCGAAGCAAGAACAAAAGTGCAAGCTTCAAGGATGACGGAGAAATGGTGGAGATAACGTTGGACGTACGTGATGACTCTGTTTCCGTTCAGAATATTCGCGGTGGAGACACCGAAACGGCGTTTCTGGCAAGCCGGCTTGAGAAGCGTCCGTCGTCGCTTTCGGCTAAACTAAGACAGGTGTCTCAGGAGCTGAAGCGCATGACGTCTTTTAAGGCGTTTGATAAGGTTGATAGATCAAAATCTGGTGCTGCTCGTGCTCTACAAGGTCTTAAGTTTATGACAAAAAACGTTGGAAGTGAAGGTTGGTCCCAAGTTGAGAAGCGTTTTGATGAGTTGGCTGTGGAGGGAAAATTGCCCAAGACTCGATTTAGCCAGAATGAACGAGTCAAGGAGTTTGCTGGTGAGTTATTTGATGCCTTAGCACGTCGTCGAGGTATAGTAGTTGCTTCCATAACAAAGGAAGAGTTGCGAGAATTTTGGGACCAAATACAGATCAAAGCTTTGATTCAAGGCTTCAAACCTTTTTTGGCATATATGCACAAGAAATGTCCATTTAAGTTGTCACTTGTCAGCATGAAAGAGATGGCCAAACGGGTGGACAAGAATGCTGATGGAAGAATTACAGAAGAAGAAGTAAAAGAGATTATTGCCTTAAGTGCTTCGGCCAATAAGCTATCAAAATTACAAGAACGAGCAGAGGAATATGCTGCCCTTATCATGGAGGAGCTGGACCCAAACAACCTTGGATATATTGAGTACAAACGTCGTGCCGTTTTCCATGTCATGGGCTATTGTGTCACCACGGCTAAGGGCGGTGCCGAGACGCTCAAGTTTAACATGGCCTTGATCTTGTTGCCTGTATGTAGAAACACCATCACTTGGCTTAGGAGTAGGACCAGGCTTGGAATGGTGGTTCCATTTGATGACAATATCAACTTTCACAAGGTGATAGCTTTTGGAATTGCAATTGGGGTTGGATTACATGCAATTTCACATTTAACTTGCGACTTCCCAAGATTATTACACGCCACAGATGAAGAATATGAACCCATGAAACAGTTTTTTGGAGATGAAAGACCTGATAATTATTGGTGGTTCGTTAAAGGAACCGAGGGTTGGACCGGTGTGGTCATGGTTGTGCTTATGGCTATAGCTTTCATTTTAGCACAACCTTGGTTTCGTCGTAATAGGCTAAACCTTCCAAAACCCCTCAAGAAACTCACTGGTTTTAATGCATTTTGGTATTCACATCACCTTTTTGTCATTGTATATGTTCTTTTTATCATTCATGGATACTTCCTTTACCTTAGCAAGAAATGGTATAAGAAAACGATCTGGCTACAAATCTGTGAGGATACTAAAGTGTACCCGGGAAATGTACTGGCATTGCATGTGTCTAAACCACAAGGGTTTAAGTACACTAGTGGACAGTATATTTATGTTAATTGTTCAGATATCTCCCCATTTGAATGGCATCCCTTTTCTATTACATCAGCTCCTGGAGATGACTATATAAGCGTTCACATTCGAACTTTGGGTGATTGGACGTCACAACTGAAGGGTATTTTCGCCAAGGCATGTCAACCAGCAAATGATGACCAAAGTGGTCTTCTAAGAGCTGATATGCTACCAGGCAAATCAAGCCTACCAAGGATGCCAAGGCTAAGAATTGATGGACCTTATGGAGCACCAGCACAAGACTACAAAAACTACGAAGTTCTTCTTCTAGTAGGACTAGGAATCGGTGCAACGCCTTTGATTAGCATACTCAAAGATGTGCTAAACAACATTAAGCAACAAGAAGAAGACTTAGAAGAAGGAGGGGAGGGTTCGTTTGAATGGTTTAAAGGGGTGATGAATGAGGTAGCGGAGAATGATAAGGAAGGAGTAATTGAGCTTCATAACTATTGCACAAGTGTGTATGAAGAAGGCGACGCTCGGTCAGCTTTGATCACAATGCTTCAATCCCTTCACCATGCCAAAAATGGTGTGGATGTAGTTTCAGAGACAAGGGTTAAGACACATTTTGCTAGGCCAAATTGGCGTAATGTTTATAAACATGTTGCTCTTAAACACCCTGAAAAAAAGTTGGTAAGTATGGATTTTACTCTTAATTAG
Protein sequence

>MsG0180004596.01.T01

MEIQENKHESWSEPEITGSRSSRVGFSGPLSGPLASRKQRSRSKNKSASFKDDGEMVEITLDVRDDSVSVQNIRGGDTETAFLASRLEKRPSSLSAKLRQVSQELKRMTSFKAFDKVDRSKSGAARALQGLKFMTKNVGSEGWSQVEKRFDELAVEGKLPKTRFSQNERVKEFAGELFDALARRRGIVVASITKEELREFWDQIQIKALIQGFKPFLAYMHKKCPFKLSLVSMKEMAKRVDKNADGRITEEEVKEIIALSASANKLSKLQERAEEYAALIMEELDPNNLGYIEYKRRAVFHVMGYCVTTAKGGAETLKFNMALILLPVCRNTITWLRSRTRLGMVVPFDDNINFHKVIAFGIAIGVGLHAISHLTCDFPRLLHATDEEYEPMKQFFGDERPDNYWWFVKGTEGWTGVVMVVLMAIAFILAQPWFRRNRLNLPKPLKKLTGFNAFWYSHHLFVIVYVLFIIHGYFLYLSKKWYKKTIWLQICEDTKVYPGNVLALHVSKPQGFKYTSGQYIYVNCSDISPFEWHPFSITSAPGDDYISVHIRTLGDWTSQLKGIFAKACQPANDDQSGLLRADMLPGKSSLPRMPRLRIDGPYGAPAQDYKNYEVLLLVGLGIGATPLISILKDVLNNIKQQEEDLEEGGEGSFEWFKGVMNEVAENDKEGVIELHNYCTSVYEEGDARSALITMLQSLHHAKNGVDVVSETRVKTHFARPNWRNVYKHVALKHPEKKLVSMDFTLN*