AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031424.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031424.01.T01 MTR_6g022720 93.702 524 10 5 40 545 5 523 0.0 999
MsG0680031424.01.T01 MTR_6g022720 97.120 382 5 4 40 420 5 381 0.0 756
MsG0680031424.01.T01 MTR_3g086010 67.319 511 142 4 40 528 5 512 0.0 707
MsG0680031424.01.T01 MTR_3g080070 64.962 528 151 7 40 535 5 530 0.0 650
MsG0680031424.01.T01 MTR_1g062950 60.220 455 161 3 79 516 25 476 0.0 551
MsG0680031424.01.T01 MTR_1g011460 51.866 509 204 6 40 529 5 491 0.0 529
MsG0680031424.01.T01 MTR_3g107980 50.380 526 193 5 40 529 5 498 0.0 523
MsG0680031424.01.T01 MTR_1g111570 57.845 427 162 2 119 528 63 488 0.0 523
MsG0680031424.01.T01 MTR_4g113020 49.617 522 224 7 40 539 5 509 4.55e-174 501
MsG0680031424.01.T01 MTR_7g102900 71.895 306 86 0 115 420 41 346 1.07e-159 460
MsG0680031424.01.T01 MTR_4g113020 54.948 384 153 5 40 420 5 371 1.98e-142 416
MsG0680031424.01.T01 MTR_1g112940 42.159 389 202 5 143 512 46 430 3.24e-109 333
MsG0680031424.01.T01 MTR_7g102920 50.000 100 48 1 414 513 19 116 3.87e-28 109
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031424.01.T01 AT4G15415 64.133 513 160 4 40 534 5 511 0.0 676
MsG0680031424.01.T01 AT4G15415 64.133 513 160 4 40 534 5 511 0.0 676
MsG0680031424.01.T01 AT4G15415 64.133 513 160 4 40 534 5 511 0.0 676
MsG0680031424.01.T01 AT4G15415 64.133 513 160 4 40 534 5 511 0.0 676
MsG0680031424.01.T01 AT3G26020 68.085 470 132 2 68 520 42 510 0.0 675
MsG0680031424.01.T01 AT3G26020 68.085 470 132 2 68 520 42 510 0.0 675
MsG0680031424.01.T01 AT3G26020 68.085 470 132 2 68 520 42 510 0.0 675
MsG0680031424.01.T01 AT3G26020 68.085 470 132 2 68 520 42 510 0.0 675
MsG0680031424.01.T01 AT3G21650 62.921 534 146 7 40 530 5 529 0.0 671
MsG0680031424.01.T01 AT3G21650 62.921 534 146 7 40 530 5 529 0.0 671
MsG0680031424.01.T01 AT1G13460 68.478 460 122 3 76 518 34 487 0.0 665
MsG0680031424.01.T01 AT1G13460 68.478 460 122 3 76 518 34 487 0.0 665
MsG0680031424.01.T01 AT3G26020 58.882 501 128 3 68 520 42 512 0.0 591
MsG0680031424.01.T01 AT3G26020 58.882 501 128 3 68 520 42 512 0.0 591
MsG0680031424.01.T01 AT3G26020 58.882 501 128 3 68 520 42 512 0.0 591
MsG0680031424.01.T01 AT3G26030 61.470 449 147 6 89 514 26 471 0.0 579
MsG0680031424.01.T01 AT3G09880 59.414 478 171 3 61 516 8 484 0.0 561
MsG0680031424.01.T01 AT5G03470 56.057 487 179 3 46 513 11 481 0.0 552
MsG0680031424.01.T01 AT4G15415 68.586 382 114 2 40 420 5 381 0.0 543
MsG0680031424.01.T01 AT5G25510 56.561 442 171 3 112 535 61 499 0.0 522
MsG0680031424.01.T01 AT3G26020 53.024 496 182 7 68 520 42 529 1.68e-177 511
MsG0680031424.01.T01 AT3G54930 51.163 473 195 3 64 517 39 494 2.11e-164 476
MsG0680031424.01.T01 AT3G54930 51.163 473 195 3 64 517 39 494 2.11e-164 476
MsG0680031424.01.T01 AT3G54930 51.958 383 179 2 40 420 1 380 2.80e-129 383

Find 138 sgRNAs with CRISPR-Local

Find 531 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAGAACTCTTGGAAATTT+TGG 0.052896 6:-20283201 MsG0680031424.01.T01:CDS
TCTCAAGCCACTGTTTATTT+TGG 0.125139 6:-20277439 MsG0680031424.01.T01:three_prime_UTR
CCAATTTGTAGTGTTAATTT+TGG 0.125992 6:-20277191 MsG0680031424.01.T01:three_prime_UTR
CGCTTCATCTTCTCTGAATT+TGG 0.135562 6:+20277807 None:intergenic
TCGAAGGAGGTTATGTTCTT+AGG 0.160154 6:-20282969 MsG0680031424.01.T01:CDS
AAACTCTCGAGGACAAATTT+AGG 0.175336 6:-20277535 MsG0680031424.01.T01:three_prime_UTR
TCGAATATACGGCAAATTTA+TGG 0.194695 6:-20283303 MsG0680031424.01.T01:CDS
TTTAAGGAAAGTTGATAATT+AGG 0.194854 6:-20277143 MsG0680031424.01.T01:three_prime_UTR
CGCTAACTTTGCATCGGTCT+CGG 0.215532 6:+20283421 None:intergenic
GTAATTGAGTTGGTTGTTTA+AGG 0.217431 6:-20277159 MsG0680031424.01.T01:three_prime_UTR
TCAACTGCTTCATCGATTTC+AGG 0.226220 6:-20283908 MsG0680031424.01.T01:CDS
CGGAGAGGGCTTTGTTCTTA+TGG 0.254048 6:-20278008 MsG0680031424.01.T01:CDS
TCCTATAGTCTTACCTGCTT+TGG 0.258535 6:-20277935 MsG0680031424.01.T01:CDS
TGCAATCAATGAACCGGTTT+TGG 0.264497 6:-20277713 MsG0680031424.01.T01:CDS
GCCGATTTCGATCCCTTCTT+AGG 0.272189 6:+20284016 None:intergenic
CCAAGAGCTCATTCAACTTC+TGG 0.279531 6:-20277685 MsG0680031424.01.T01:CDS
GATTCTTGAAGCCTTTGATA+TGG 0.292604 6:-20283525 MsG0680031424.01.T01:CDS
TTAAGGAAAGTTGATAATTA+GGG 0.292728 6:-20277142 MsG0680031424.01.T01:three_prime_UTR
GCTTTCATACTTAACTTTGA+TGG 0.297776 6:-20277236 MsG0680031424.01.T01:three_prime_UTR
TTGTGTATGAGCTTCTTCTT+AGG 0.299326 6:-20283457 MsG0680031424.01.T01:CDS
TCCTTCGAACTATTTGTTAT+CGG 0.308563 6:+20282984 None:intergenic
CCAAAATTAACACTACAAAT+TGG 0.315445 6:+20277191 None:intergenic
AAAACATCAGAGCTGTTCTA+AGG 0.326717 6:-20277601 MsG0680031424.01.T01:three_prime_UTR
TCCGCGGATTATTGAAATAC+TGG 0.329980 6:-20283007 MsG0680031424.01.T01:CDS
TTCTACCAAGAATCACAAAA+TGG 0.335147 6:-20277280 MsG0680031424.01.T01:three_prime_UTR
AAATTCGGCTTCTCCGAATT+CGG 0.340768 6:+20283767 None:intergenic
GTGGAAGCGCTTGGAAGAAA+TGG 0.343081 6:-20277749 MsG0680031424.01.T01:CDS
CGAAGGAGGTTATGTTCTTA+GGG 0.349809 6:-20282968 MsG0680031424.01.T01:CDS
AACTTTCTTATAAACAAATT+CGG 0.352481 6:+20283752 None:intergenic
GATTATGTTTCCTCGGCTAA+TGG 0.374099 6:-20283638 MsG0680031424.01.T01:CDS
CCAGAAGTTGAATGAGCTCT+TGG 0.383137 6:+20277685 None:intergenic
TGGAATTCACTTTCTGTAGC+TGG 0.386775 6:-20277419 MsG0680031424.01.T01:three_prime_UTR
AACTCTCGAGGACAAATTTA+GGG 0.389231 6:-20277534 MsG0680031424.01.T01:three_prime_UTR
GCTAACTTTGCATCGGTCTC+GGG 0.390560 6:+20283422 None:intergenic
AATAATGAAGGAGGAGGAGG+AGG 0.390919 6:-20283989 MsG0680031424.01.T01:CDS
TTATTGCATCACACAGTTTG+TGG 0.396357 6:-20283060 MsG0680031424.01.T01:CDS
CAATGGTATTGCAGAACTCT+TGG 0.400473 6:-20283210 MsG0680031424.01.T01:CDS
TGATACATCGGTATGCATTT+CGG 0.403855 6:+20283095 None:intergenic
TTATATTCTCAAGTTATTGC+CGG 0.412858 6:-20277340 MsG0680031424.01.T01:three_prime_UTR
ACCTAAGAAGGGATCGAAAT+CGG 0.416991 6:-20284017 MsG0680031424.01.T01:CDS
CCGTGTCGGTAAATTTGTTC+CGG 0.420801 6:-20283577 MsG0680031424.01.T01:CDS
TCATGCTTGTAAAACAAAGT+TGG 0.422155 6:+20277499 None:intergenic
TAGGATCCTCTGAATCAAAA+AGG 0.434877 6:+20283357 None:intergenic
GGTGGCAAGTAGGCCTCAAT+TGG 0.436524 6:-20277659 MsG0680031424.01.T01:CDS
AAATGTCAGCAAGATCTTCT+CGG 0.442560 6:-20277863 MsG0680031424.01.T01:CDS
GAAAGTTGCAATCAATGAAC+CGG 0.443657 6:-20277719 MsG0680031424.01.T01:CDS
TGCTCAAGCAGATATTAAAT+AGG 0.447685 6:-20284042 MsG0680031424.01.T01:intron
ATTAAATAGGATACCTAAGA+AGG 0.447907 6:-20284029 MsG0680031424.01.T01:CDS
TTCTTCCAAGCGCTTCCACC+TGG 0.450283 6:+20277753 None:intergenic
TCATACACAATTTGCAAGTA+AGG 0.456247 6:+20283470 None:intergenic
GGTTATGTTCTTAGGGGAGC+TGG 0.456454 6:-20282961 MsG0680031424.01.T01:CDS
ACGGTTCTTCATCGAATATA+CGG 0.457807 6:-20283314 MsG0680031424.01.T01:CDS
GTTGATTCTAATTCGAGTAT+TGG 0.458919 6:-20283884 MsG0680031424.01.T01:CDS
TTCGAAGAACATTAAAGAAA+AGG 0.464783 6:-20283693 MsG0680031424.01.T01:CDS
TGACATTTATTGTCAAGCTT+CGG 0.466643 6:+20277878 None:intergenic
GTCAGTGACCATGTCGTGTT+TGG 0.467772 6:-20284290 MsG0680031424.01.T01:intron
GAAAATAATGAAGGAGGAGG+AGG 0.475886 6:-20283992 MsG0680031424.01.T01:CDS
AACAGTGTAAGAAGCAGTTA+TGG 0.475929 6:-20283935 MsG0680031424.01.T01:CDS
ATTTGCAAGTAAGGCCATGC+AGG 0.476606 6:+20283479 None:intergenic
CGAAGCCAGGTGGAAGCGCT+TGG 0.479704 6:-20277758 MsG0680031424.01.T01:CDS
GGTTTCATGTGTAATTGAGT+TGG 0.485480 6:-20277169 MsG0680031424.01.T01:three_prime_UTR
CATAATCCACAAGCTCTACA+AGG 0.488047 6:+20283654 None:intergenic
TCCAAAGCAGGTAAGACTAT+AGG 0.488189 6:+20277934 None:intergenic
AGGGGAGCTGGAAGAAGTCT+TGG 0.490615 6:-20282949 MsG0680031424.01.T01:CDS
GGCCATGCAGGGTCCATTGA+AGG 0.490968 6:+20283491 None:intergenic
AGCAAAATGCACGTAGCCAC+TGG 0.493514 6:-20277912 MsG0680031424.01.T01:CDS
TGAATTGCATGGGACTTGAA+TGG 0.493697 6:-20277465 MsG0680031424.01.T01:three_prime_UTR
GCTTGTGGATTATGTTTCCT+CGG 0.493940 6:-20283645 MsG0680031424.01.T01:CDS
TTCGGAACGTCGCGAAAACT+CGG 0.500296 6:+20283785 None:intergenic
GAATTTGCAGGTGGCGGAGA+GGG 0.501622 6:-20278022 MsG0680031424.01.T01:intron
GGTTATCTTGTAATGAATTG+TGG 0.502597 6:-20277120 MsG0680031424.01.T01:three_prime_UTR
TTTCTTTAATGTTCTTCGAA+GGG 0.504137 6:+20283696 None:intergenic
TGAAGTCAAAACACGAAGCC+AGG 0.505449 6:-20277771 MsG0680031424.01.T01:CDS
TGGAAGCGCTTGGAAGAAAT+GGG 0.506396 6:-20277748 MsG0680031424.01.T01:CDS
TTGTCAAGCTTCGGACGGCT+TGG 0.511126 6:+20277887 None:intergenic
GGATGAAGAAGAGCCTTCAA+TGG 0.533922 6:-20283504 MsG0680031424.01.T01:CDS
AATGTATATATTGAATTGCA+TGG 0.539824 6:-20277476 MsG0680031424.01.T01:three_prime_UTR
AGCTCATTCAACTTCTGGTA+AGG 0.541235 6:-20277680 MsG0680031424.01.T01:CDS
GCAGACCCTTGTAGAGCTTG+TGG 0.544695 6:-20283660 MsG0680031424.01.T01:CDS
CTCTTCTTCATCCATATCAA+AGG 0.545730 6:+20283514 None:intergenic
TCTCAAAGTTGTGTTTGTGT+TGG 0.549465 6:-20284332 MsG0680031424.01.T01:CDS
TTCAAGGATCAATCCAATTG+AGG 0.551028 6:+20277646 None:intergenic
ATGCATTTCGGTTTATGAAG+AGG 0.551411 6:+20283107 None:intergenic
TTCGGACGGCTTGGTTCCAG+TGG 0.556392 6:+20277896 None:intergenic
TTGATTGCCTTTCTGATGAA+CGG 0.558497 6:+20283272 None:intergenic
AGCCTTCAATGGACCCTGCA+TGG 0.559891 6:-20283493 MsG0680031424.01.T01:CDS
GAGGTGGAGTAGTCAATGTC+CGG 0.560804 6:+20283558 None:intergenic
GCTCTTGGAGAAACCAAAAC+CGG 0.564011 6:+20277700 None:intergenic
CAAACACAACTTTGAGACAA+TGG 0.565566 6:+20284338 None:intergenic
ATGCACTCCTCGTAGAATGC+AGG 0.566412 6:+20277832 None:intergenic
AGCTTGTGCTCTTCTTTCAG+TGG 0.566763 6:+20283152 None:intergenic
GCATCGACCGTTCATCAGAA+AGG 0.572645 6:-20283279 MsG0680031424.01.T01:CDS
TTCAAGTAATCCCTCTCTCT+AGG 0.573114 6:+20283338 None:intergenic
TCAAGAATCTTGTTCTCGCG+AGG 0.574857 6:+20283539 None:intergenic
TTCAGAGGATCCTAGAGAGA+GGG 0.575462 6:-20283348 MsG0680031424.01.T01:CDS
CCGGAACAAATTTACCGACA+CGG 0.575626 6:+20283577 None:intergenic
CTACATAGATCAAACTTCAA+AGG 0.575922 6:+20277396 None:intergenic
GATTCTAATTCGAGTATTGG+AGG 0.578114 6:-20283881 MsG0680031424.01.T01:CDS
AAACATCAGAGCTGTTCTAA+GGG 0.582166 6:-20277600 MsG0680031424.01.T01:three_prime_UTR
TAAGGAAAGTTGATAATTAG+GGG 0.585700 6:-20277141 MsG0680031424.01.T01:three_prime_UTR
AGAGAGGGATTACTTGAAGA+CGG 0.588771 6:-20283333 MsG0680031424.01.T01:CDS
AAATCGGCGGAAAATAATGA+AGG 0.589197 6:-20284001 MsG0680031424.01.T01:CDS
AATTCAAAATTGAATCTGAA+CGG 0.590014 6:-20283836 MsG0680031424.01.T01:CDS
GAAGGAGGTTATGTTCTTAG+GGG 0.593040 6:-20282967 MsG0680031424.01.T01:CDS
TGAATTTGCAGGTGGCGGAG+AGG 0.595753 6:-20278023 MsG0680031424.01.T01:intron
GACCAATACCAAACACGACA+TGG 0.607236 6:+20284282 None:intergenic
GCGGAAAATAATGAAGGAGG+AGG 0.607722 6:-20283995 MsG0680031424.01.T01:CDS
AGAATCTTGTTCTCGCGAGG+TGG 0.610502 6:+20283542 None:intergenic
CTTCTGGTAAGGTGGCAAGT+AGG 0.612593 6:-20277669 MsG0680031424.01.T01:CDS
TTTGAAACTGAGAAACACAA+TGG 0.613214 6:-20283227 MsG0680031424.01.T01:CDS
TTAAAGAAAAGGAGATTAAG+CGG 0.613411 6:-20283682 MsG0680031424.01.T01:CDS
GCCGATAACAAATAGTTCGA+AGG 0.613745 6:-20282985 MsG0680031424.01.T01:CDS
TCATTCAACTTCTGGTAAGG+TGG 0.615469 6:-20277677 MsG0680031424.01.T01:CDS
TTAAATAGGATACCTAAGAA+GGG 0.617716 6:-20284028 MsG0680031424.01.T01:CDS
ATTCAGAGGATCCTAGAGAG+AGG 0.623951 6:-20283349 MsG0680031424.01.T01:CDS
TGATGCAATAAGATAACTGC+TGG 0.625253 6:+20283072 None:intergenic
GATAACTGCTGGTGATACAT+CGG 0.626424 6:+20283083 None:intergenic
ATGTATATATTGAATTGCAT+GGG 0.627564 6:-20277475 MsG0680031424.01.T01:three_prime_UTR
CACATGTGTCAGTGCCGTGT+CGG 0.629535 6:+20284377 None:intergenic
ATTTATTGTCAAGCTTCGGA+CGG 0.629584 6:+20277882 None:intergenic
AGTAAACTTGCCATTAGCCG+AGG 0.632188 6:+20283628 None:intergenic
CGGTGTCAACATGTCAGTGT+CGG 0.632853 6:-20277320 MsG0680031424.01.T01:three_prime_UTR
ATTCTTGTCACAAATAACAC+AGG 0.633135 6:+20277060 None:intergenic
TTTGCAAGTAAGGCCATGCA+GGG 0.637736 6:+20283480 None:intergenic
CGACACTGACATGTTGACAC+CGG 0.643289 6:+20277321 None:intergenic
ATAATCCACAAGCTCTACAA+GGG 0.657046 6:+20283655 None:intergenic
GTGAATTCCAAAATAAACAG+TGG 0.657636 6:+20277432 None:intergenic
ACGACATGGTCACTGACACA+CGG 0.661173 6:+20284296 None:intergenic
CTTGCTGATACGATTATCCG+CGG 0.664648 6:-20283023 MsG0680031424.01.T01:CDS
GATAACAAATAGTTCGAAGG+AGG 0.665913 6:-20282982 MsG0680031424.01.T01:CDS
GCCAGTATTTCAATAATCCG+CGG 0.667257 6:+20283006 None:intergenic
TCCGACATGTCAGTCCGACA+CGG 0.669618 6:-20284391 None:intergenic
CACTGATCCTGCATTCTACG+AGG 0.670410 6:-20277839 MsG0680031424.01.T01:CDS
AGTCAAAACACGAAGCCAGG+TGG 0.676815 6:-20277768 MsG0680031424.01.T01:CDS
TCGGCGGAAAATAATGAAGG+AGG 0.683812 6:-20283998 MsG0680031424.01.T01:CDS
AGAAATCGTGAAAACCGTGT+CGG 0.693723 6:-20283591 MsG0680031424.01.T01:CDS
AAGCGCTTGGAAGAAATGGG+AGG 0.713502 6:-20277745 MsG0680031424.01.T01:CDS
TAAGAAGGGATCGAAATCGG+CGG 0.721098 6:-20284014 MsG0680031424.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATATTTTTTACATCAAAT+AGG - Chr6:20282602-20282621 MsG0680031424.01.T01:intron 10.0%
!!! CTTTTAATTTTTTTTCATTT+GGG - Chr6:20281520-20281539 MsG0680031424.01.T01:intron 10.0%
!!! TATATTTTTTACATCAAATA+GGG - Chr6:20282603-20282622 MsG0680031424.01.T01:intron 10.0%
!!! TATCAGTTTAAAATATTTTA+AGG - Chr6:20281393-20281412 MsG0680031424.01.T01:intron 10.0%
!!! TCTTTTAATTTTTTTTCATT+TGG - Chr6:20281519-20281538 MsG0680031424.01.T01:intron 10.0%
!! AACTTTCTTATAAACAAATT+CGG + Chr6:20277704-20277723 None:intergenic 15.0%
!! AATTTATGTTTGAAAATTGA+TGG - Chr6:20279142-20279161 MsG0680031424.01.T01:intron 15.0%
!! ATTAATGTAGAATAAAAGAA+GGG - Chr6:20280982-20281001 MsG0680031424.01.T01:intron 15.0%
!! TTCATAGAAATTAAAATCAA+AGG + Chr6:20279123-20279142 None:intergenic 15.0%
!! TTGAGTAGATATAATAAAAA+GGG + Chr6:20282183-20282202 None:intergenic 15.0%
!!! AAAAAGGTATTAATTGAATA+TGG + Chr6:20278955-20278974 None:intergenic 15.0%
!!! AAATATAAATTTTCAAGTTC+AGG + Chr6:20279990-20280009 None:intergenic 15.0%
!!! AATATAAATTTTCAAGTTCA+GGG + Chr6:20279989-20280008 None:intergenic 15.0%
!! AAACATTAAAGAATTCAAAG+TGG - Chr6:20280323-20280342 MsG0680031424.01.T01:intron 20.0%
!! AATGTATATATTGAATTGCA+TGG - Chr6:20283977-20283996 MsG0680031424.01.T01:CDS 20.0%
!! AATTCAAAATTGAATCTGAA+CGG - Chr6:20277617-20277636 MsG0680031424.01.T01:three_prime_UTR 20.0%
!! AGATTACAAGAATATAGTTA+TGG + Chr6:20283389-20283408 None:intergenic 20.0%
!! ATAATATATGATGTGATATC+AGG - Chr6:20280226-20280245 MsG0680031424.01.T01:intron 20.0%
!! ATCACATAATTACTATAAAG+AGG + Chr6:20282824-20282843 None:intergenic 20.0%
!! ATCTTATAAAACTGATGATT+TGG - Chr6:20281854-20281873 MsG0680031424.01.T01:intron 20.0%
!! ATGTATATATTGAATTGCAT+GGG - Chr6:20283978-20283997 MsG0680031424.01.T01:CDS 20.0%
!! ATTAAAGTTATGCAATTTCA+GGG - Chr6:20280853-20280872 MsG0680031424.01.T01:intron 20.0%
!! CTTGAGTAGATATAATAAAA+AGG + Chr6:20282184-20282203 None:intergenic 20.0%
!! GATTAATGTAGAATAAAAGA+AGG - Chr6:20280981-20281000 MsG0680031424.01.T01:intron 20.0%
!! TAACAAAAGTTAAAAATTGC+TGG + Chr6:20281315-20281334 None:intergenic 20.0%
!! TACAAATTGGAAAAACAAAA+TGG + Chr6:20284252-20284271 None:intergenic 20.0%
!! TACATTTCCAATAAATGTAT+TGG + Chr6:20281081-20281100 None:intergenic 20.0%
!! TATAGAGACTCTTAAAATTT+GGG + Chr6:20281698-20281717 None:intergenic 20.0%
!! TCACATAATTACTATAAAGA+GGG + Chr6:20282823-20282842 None:intergenic 20.0%
!! TCCTTGTAAAATTATACAAT+AGG - Chr6:20280959-20280978 MsG0680031424.01.T01:intron 20.0%
!! TTATGACTAGAAGTAAAAAT+TGG - Chr6:20280076-20280095 MsG0680031424.01.T01:intron 20.0%
!!! AAATCATCAGTTTTATAAGA+TGG + Chr6:20281855-20281874 None:intergenic 20.0%
!!! AAGAGATAACTTTTAAGTTT+AGG - Chr6:20280739-20280758 MsG0680031424.01.T01:intron 20.0%
!!! AGAGATAACTTTTAAGTTTA+GGG - Chr6:20280740-20280759 MsG0680031424.01.T01:intron 20.0%
!!! ATATAAATTTTCAAGTTCAG+GGG + Chr6:20279988-20280007 None:intergenic 20.0%
!!! ATTGACTCAAAAGATATTAA+AGG - Chr6:20280020-20280039 MsG0680031424.01.T01:intron 20.0%
!!! ATTTTCATTTGTTCTGTATA+AGG - Chr6:20277251-20277270 MsG0680031424.01.T01:three_prime_UTR 20.0%
!!! ATTTTTCTGTTAACTGTTTA+CGG - Chr6:20279915-20279934 MsG0680031424.01.T01:intron 20.0%
!!! ATTTTTCTGTTAACTGTTTA+CGG + Chr6:20279934-20279915 None:intergenic 20.0%
!!! CAATTTGTAGTGTTAATTTT+GGG - Chr6:20284263-20284282 MsG0680031424.01.T01:intron 20.0%
!!! GTATGCTATATTCTTATTTT+TGG - Chr6:20282240-20282259 MsG0680031424.01.T01:intron 20.0%
!!! TAATTTTACAAGGAGTAAAT+AGG + Chr6:20280953-20280972 None:intergenic 20.0%
!!! TAGTTTTCAAATGTTTGTAA+TGG + Chr6:20280631-20280650 None:intergenic 20.0%
!!! TCCTATTGTATAATTTTACA+AGG + Chr6:20280963-20280982 None:intergenic 20.0%
!!! TTAAGGAAAGTTGATAATTA+GGG - Chr6:20284311-20284330 MsG0680031424.01.T01:CDS 20.0%
!!! TTTAAGGAAAGTTGATAATT+AGG - Chr6:20284310-20284329 MsG0680031424.01.T01:CDS 20.0%
!!! TTTTCATTTGTTCTGTATAA+GGG - Chr6:20277252-20277271 MsG0680031424.01.T01:three_prime_UTR 20.0%
! AAAATACATCATTTCCAGAA+TGG - Chr6:20282348-20282367 MsG0680031424.01.T01:intron 25.0%
! AATCACACATTGTGAAAAAT+AGG - Chr6:20279399-20279418 MsG0680031424.01.T01:intron 25.0%
! AATGTTGAATATATTGACGA+AGG + Chr6:20279630-20279649 None:intergenic 25.0%
! AATTGAGAAGAATCACATTT+GGG - Chr6:20280375-20280394 MsG0680031424.01.T01:intron 25.0%
! AATTGATGTTTCGTTAACTA+CGG + Chr6:20280899-20280880 None:intergenic 25.0%
! ACAGTTAACAGAAAAATTGA+CGG - Chr6:20280817-20280836 MsG0680031424.01.T01:intron 25.0%
! ACAGTTAACAGAAAAATTGA+CGG + Chr6:20280836-20280817 None:intergenic 25.0%
! ACATAATTACTATAAAGAGG+GGG + Chr6:20282821-20282840 None:intergenic 25.0%
! AGAGTATATCTTATCAAATG+AGG + Chr6:20281599-20281618 None:intergenic 25.0%
! ATAGTAATTATGTGATCTGA+GGG - Chr6:20282828-20282847 MsG0680031424.01.T01:intron 25.0%
! ATCACACATTGTGAAAAATA+GGG - Chr6:20279400-20279419 MsG0680031424.01.T01:intron 25.0%
! ATTAAATAGGATACCTAAGA+AGG - Chr6:20277424-20277443 MsG0680031424.01.T01:three_prime_UTR 25.0%
! ATTAACGTTATGCAATTTCA+GGG + Chr6:20279876-20279895 None:intergenic 25.0%
! ATTGACGAAACTTACAATTT+CGG - Chr6:20280910-20280929 MsG0680031424.01.T01:intron 25.0%
! ATTGACGAAACTTACAATTT+CGG + Chr6:20280929-20280910 None:intergenic 25.0%
! CACATAATTACTATAAAGAG+GGG + Chr6:20282822-20282841 None:intergenic 25.0%
! CCAAAATTAACACTACAAAT+TGG + Chr6:20284265-20284284 None:intergenic 25.0%
! CCATGATTTCTTATAAAAGA+AGG - Chr6:20281786-20281805 MsG0680031424.01.T01:intron 25.0%
! CTATAGAGACTCTTAAAATT+TGG + Chr6:20281699-20281718 None:intergenic 25.0%
! GAGTATATCTTATCAAATGA+GGG + Chr6:20281598-20281617 None:intergenic 25.0%
! GATTAAAGTTATGCAATTTC+AGG - Chr6:20280852-20280871 MsG0680031424.01.T01:intron 25.0%
! GTCTTGTAAAATGAGTAAAT+AGG - Chr6:20279783-20279802 MsG0680031424.01.T01:intron 25.0%
! TATAGTAATTATGTGATCTG+AGG - Chr6:20282827-20282846 MsG0680031424.01.T01:intron 25.0%
! TCTCAGTTTCAAAAATGAAA+CGG + Chr6:20278219-20278238 None:intergenic 25.0%
! TCTGAAAATGTGTTTATAAG+TGG - Chr6:20281616-20281635 MsG0680031424.01.T01:intron 25.0%
! TCTTATGAGACAACAAAAAA+AGG + Chr6:20278971-20278990 None:intergenic 25.0%
! TTAAAGAAAAGGAGATTAAG+CGG - Chr6:20277771-20277790 MsG0680031424.01.T01:CDS 25.0%
! TTAAAGTTATGCAATTTCAG+GGG - Chr6:20280854-20280873 MsG0680031424.01.T01:intron 25.0%
! TTAAATAGGATACCTAAGAA+GGG - Chr6:20277425-20277444 MsG0680031424.01.T01:three_prime_UTR 25.0%
! TTATATTCTCAAGTTATTGC+CGG - Chr6:20284113-20284132 MsG0680031424.01.T01:intron 25.0%
! TTCGAAGAACATTAAAGAAA+AGG - Chr6:20277760-20277779 MsG0680031424.01.T01:CDS 25.0%
! TTTCATTTGTTCTGTATAAG+GGG - Chr6:20277253-20277272 MsG0680031424.01.T01:three_prime_UTR 25.0%
! TTTCTTTAATGTTCTTCGAA+GGG + Chr6:20277760-20277779 None:intergenic 25.0%
!! ACATGTTTTCACATTCTAAA+CGG + Chr6:20283246-20283265 None:intergenic 25.0%
!! CATTTTTGCCTAAATTTTCA+AGG + Chr6:20283310-20283329 None:intergenic 25.0%
!! CCAATTTGTAGTGTTAATTT+TGG - Chr6:20284262-20284281 MsG0680031424.01.T01:intron 25.0%
!! CCTTCTTTTATAAGAAATCA+TGG + Chr6:20281789-20281808 None:intergenic 25.0%
!! TATTTGAAGTAGCATCAATA+AGG - Chr6:20277330-20277349 MsG0680031424.01.T01:three_prime_UTR 25.0%
!! TTTTCTTTAATGTTCTTCGA+AGG + Chr6:20277761-20277780 None:intergenic 25.0%
!!! AACGGTTTCATTTATTTTCA+AGG + Chr6:20283228-20283247 None:intergenic 25.0%
!!! AGATAACTTTTAAGTTTAGG+GGG - Chr6:20280742-20280761 MsG0680031424.01.T01:intron 25.0%
!!! ATAGTCAGTTTTGTTCATAT+TGG - Chr6:20281739-20281758 MsG0680031424.01.T01:intron 25.0%
!!! ATATTGTTTCTTTTTAGGCA+AGG - Chr6:20280484-20280503 MsG0680031424.01.T01:intron 25.0%
!!! ATTTTGGGAAGTATAATCAA+CGG - Chr6:20278268-20278287 MsG0680031424.01.T01:intron 25.0%
!!! GAGATAACTTTTAAGTTTAG+GGG - Chr6:20280741-20280760 MsG0680031424.01.T01:intron 25.0%
!!! GATGCATATTGTTTCTTTTT+AGG - Chr6:20280479-20280498 MsG0680031424.01.T01:intron 25.0%
!!! TAAGGAAAGTTGATAATTAG+GGG - Chr6:20284312-20284331 MsG0680031424.01.T01:CDS 25.0%
!!! TATAAATTTTCAAGTTCAGG+GGG + Chr6:20279987-20280006 None:intergenic 25.0%
!!! TCAGTTTTATAAGATGGTAA+AGG + Chr6:20281849-20281868 None:intergenic 25.0%
!!! TTAATTTGTCTTTGATCCAA+TGG - Chr6:20282452-20282471 MsG0680031424.01.T01:intron 25.0%
AAAGCTATGATCCATTATTC+TGG - Chr6:20283347-20283366 MsG0680031424.01.T01:CDS 30.0%
AAGCATTATATCTACTCAAG+TGG - Chr6:20281985-20282004 MsG0680031424.01.T01:intron 30.0%
AATGAACTTCTCCAATTGTA+GGG - Chr6:20281474-20281493 MsG0680031424.01.T01:intron 30.0%
ACAAAGAATCCAAACTACTA+AGG + Chr6:20281923-20281942 None:intergenic 30.0%
ACAAAGCTATAGATCTAAGA+TGG - Chr6:20280422-20280441 MsG0680031424.01.T01:intron 30.0%
ACTATAGCACTGTAAGATAA+AGG + Chr6:20278773-20278792 None:intergenic 30.0%
AGCATTATATCTACTCAAGT+GGG - Chr6:20281986-20282005 MsG0680031424.01.T01:intron 30.0%
AGTATGGACTTAAAGTTTGA+GGG + Chr6:20281557-20281576 None:intergenic 30.0%
AGTTAGTTATGAAAGTTCGA+TGG - Chr6:20280704-20280723 MsG0680031424.01.T01:intron 30.0%
ATATAATAAAAAGGGCAACC+CGG + Chr6:20282175-20282194 None:intergenic 30.0%
ATATAGTCATATAGCATAGC+AGG + Chr6:20278863-20278882 None:intergenic 30.0%
ATGCAAAGAATTGTAACTGT+TGG - Chr6:20282280-20282299 MsG0680031424.01.T01:intron 30.0%
ATTACTTTCAAAACCTCACT+CGG - Chr6:20281009-20281028 MsG0680031424.01.T01:intron 30.0%
ATTAGTCAAAACCCTACAAT+TGG + Chr6:20281488-20281507 None:intergenic 30.0%
ATTGATGTTTCGTTAACTAC+AGG - Chr6:20280881-20280900 MsG0680031424.01.T01:intron 30.0%
ATTGATGTTTCGTTAACTAC+GGG + Chr6:20280900-20280881 None:intergenic 30.0%
CAATTGAGAAGAATCACATT+TGG - Chr6:20280374-20280393 MsG0680031424.01.T01:intron 30.0%
CATGTCTTCCTTGAAAATTT+AGG - Chr6:20283299-20283318 MsG0680031424.01.T01:CDS 30.0%
CTAAAGAAGACCACAAAAAT+TGG + Chr6:20279208-20279227 None:intergenic 30.0%
CTACATAGATCAAACTTCAA+AGG + Chr6:20284060-20284079 None:intergenic 30.0%
CTTACATTGAAGAAAGCAAA+AGG + Chr6:20279607-20279626 None:intergenic 30.0%
CTTAGAGATGAAGTAACTAA+AGG - Chr6:20280558-20280577 MsG0680031424.01.T01:intron 30.0%
CTTGAGTAGATATAATGCTT+TGG + Chr6:20281985-20282004 None:intergenic 30.0%
GAAAATGTGTTTATAAGTGG+TGG - Chr6:20281619-20281638 MsG0680031424.01.T01:intron 30.0%
GAGTCAGTATTATCAAATAG+AGG + Chr6:20279561-20279580 None:intergenic 30.0%
GATGCATAAACACAAACTTA+AGG + Chr6:20279077-20279096 None:intergenic 30.0%
GATTAACGTTATGCAATTTC+AGG + Chr6:20279877-20279896 None:intergenic 30.0%
GCTTTCATACTTAACTTTGA+TGG - Chr6:20284217-20284236 MsG0680031424.01.T01:intron 30.0%
GGTTATCTTGTAATGAATTG+TGG - Chr6:20284333-20284352 MsG0680031424.01.T01:CDS 30.0%
GTGAATTCCAAAATAAACAG+TGG + Chr6:20284024-20284043 None:intergenic 30.0%
GTGGAAACAAACATGAATTA+AGG - Chr6:20280669-20280688 MsG0680031424.01.T01:intron 30.0%
TAAAGTTATGCAATTTCAGG+GGG - Chr6:20280855-20280874 MsG0680031424.01.T01:intron 30.0%
TACCACACTAAGGAAAAATA+AGG + Chr6:20278908-20278927 None:intergenic 30.0%
TACCAGTAAGATAACTTTCA+AGG + Chr6:20283272-20283291 None:intergenic 30.0%
TAGTATGGACTTAAAGTTTG+AGG + Chr6:20281558-20281577 None:intergenic 30.0%
TATCTACTCAAGTATGAGTT+TGG - Chr6:20282192-20282211 MsG0680031424.01.T01:intron 30.0%
TATCTTCTATTTGACAACAC+TGG - Chr6:20278880-20278899 MsG0680031424.01.T01:intron 30.0%
TCAACAAAATGCAAGTTAGA+GGG + Chr6:20282922-20282941 None:intergenic 30.0%
TCAATCCTACAAAATCAGTA+TGG + Chr6:20281664-20281683 None:intergenic 30.0%
TCACACATTGTGAAAAATAG+GGG - Chr6:20279401-20279420 MsG0680031424.01.T01:intron 30.0%
TCATACACAATTTGCAAGTA+AGG + Chr6:20277986-20278005 None:intergenic 30.0%
TCATGCTTGTAAAACAAAGT+TGG + Chr6:20283957-20283976 None:intergenic 30.0%
TCGAATATACGGCAAATTTA+TGG - Chr6:20278150-20278169 MsG0680031424.01.T01:intron 30.0%
TCTCATAAGATATGAGACAT+AGG - Chr6:20278981-20279000 MsG0680031424.01.T01:intron 30.0%
TCTCTCTCCAATACATTTAT+TGG - Chr6:20281071-20281090 MsG0680031424.01.T01:intron 30.0%
TCTTAACAGAGACATTAGTA+TGG + Chr6:20281573-20281592 None:intergenic 30.0%
TGACATTTATTGTCAAGCTT+CGG + Chr6:20283578-20283597 None:intergenic 30.0%
TGCTCAAGCAGATATTAAAT+AGG - Chr6:20277411-20277430 MsG0680031424.01.T01:three_prime_UTR 30.0%
TTAACAGAAAAATTGACGGA+GGG - Chr6:20280821-20280840 MsG0680031424.01.T01:intron 30.0%
TTAACAGAAAAATTGACGGA+GGG + Chr6:20280840-20280821 None:intergenic 30.0%
TTAACGTTATGCAATTTCAG+GGG + Chr6:20279875-20279894 None:intergenic 30.0%
TTCCTTGAAAGTTATCTTAC+TGG - Chr6:20283267-20283286 MsG0680031424.01.T01:CDS 30.0%
TTCTACCAAGAATCACAAAA+TGG - Chr6:20284173-20284192 MsG0680031424.01.T01:intron 30.0%
TTGACGAAACTTACAATTTC+GGG - Chr6:20280911-20280930 MsG0680031424.01.T01:intron 30.0%
TTGACGAAACTTACAATTTC+GGG + Chr6:20280930-20280911 None:intergenic 30.0%
TTGATGTTTCGTTAACTACA+GGG - Chr6:20280882-20280901 MsG0680031424.01.T01:intron 30.0%
TTTAATAGACCGCTATTGTA+CGG + Chr6:20278839-20278858 None:intergenic 30.0%
TTTATTGAGGATATGATTGC+AGG - Chr6:20279670-20279689 MsG0680031424.01.T01:intron 30.0%
! AGACTCTTAAAATTTGGGTT+TGG + Chr6:20281693-20281712 None:intergenic 30.0%
! ATTGTCATTTGTCACCTTAT+TGG - Chr6:20282653-20282672 MsG0680031424.01.T01:intron 30.0%
! CAAAGCTATAGATCTAAGAT+GGG - Chr6:20280423-20280442 MsG0680031424.01.T01:intron 30.0%
! CAAATATTGTTTTCTGTACC+AGG + Chr6:20283172-20283191 None:intergenic 30.0%
! CAATTTTTGTGGTCTTCTTT+AGG - Chr6:20279206-20279225 MsG0680031424.01.T01:intron 30.0%
! GTTGATTCTAATTCGAGTAT+TGG - Chr6:20277569-20277588 MsG0680031424.01.T01:three_prime_UTR 30.0%
! TGAATTTGATGATCGACTTA+AGG + Chr6:20279728-20279747 None:intergenic 30.0%
! TGATTTTGTAGGATTGAGTT+AGG - Chr6:20281667-20281686 MsG0680031424.01.T01:intron 30.0%
! TTTGAAACTGAGAAACACAA+TGG - Chr6:20278226-20278245 MsG0680031424.01.T01:intron 30.0%
! TTTTGCCACGGTATATTATT+TGG + Chr6:20281275-20281294 None:intergenic 30.0%
!! AGATCTATAGCTTTGTTGTT+TGG + Chr6:20280418-20280437 None:intergenic 30.0%
!! GAAGCATTGAATCTTACTTA+AGG - Chr6:20280131-20280150 MsG0680031424.01.T01:intron 30.0%
!! GTAATTGAGTTGGTTGTTTA+AGG - Chr6:20284294-20284313 MsG0680031424.01.T01:CDS 30.0%
!! TAATTTTGATCTTCGACTCA+AGG + Chr6:20282435-20282454 None:intergenic 30.0%
!! TACAAAGTGTTGTCAAATAC+CGG + Chr6:20279472-20279491 None:intergenic 30.0%
!! TCCTTCGAACTATTTGTTAT+CGG + Chr6:20278472-20278491 None:intergenic 30.0%
!!! AAAAGCCATACTGATTTTGT+AGG - Chr6:20281656-20281675 MsG0680031424.01.T01:intron 30.0%
!!! AATTGTAGGGTTTTGACTAA+TGG - Chr6:20281487-20281506 MsG0680031424.01.T01:intron 30.0%
!!! GATAATATGCTGTTTTTCGT+TGG - Chr6:20283877-20283896 MsG0680031424.01.T01:CDS 30.0%
!!! GATATTTTGATGCCAAAGTA+AGG - Chr6:20282756-20282775 MsG0680031424.01.T01:intron 30.0%
!!! GGATTGATCCTTGAATTTTT+TGG - Chr6:20283815-20283834 MsG0680031424.01.T01:CDS 30.0%
!!! TATGCTGTTTCCAATTTTTG+TGG - Chr6:20279195-20279214 MsG0680031424.01.T01:intron 30.0%
AAAACATCAGAGCTGTTCTA+AGG - Chr6:20283852-20283871 MsG0680031424.01.T01:CDS 35.0%
AAACATCAGAGCTGTTCTAA+GGG - Chr6:20283853-20283872 MsG0680031424.01.T01:CDS 35.0%
AAACTCTCGAGGACAAATTT+AGG - Chr6:20283918-20283937 MsG0680031424.01.T01:CDS 35.0%
AAAGTTATGCAATTTCAGGG+GGG - Chr6:20280856-20280875 MsG0680031424.01.T01:intron 35.0%
AAATCGGCGGAAAATAATGA+AGG - Chr6:20277452-20277471 MsG0680031424.01.T01:three_prime_UTR 35.0%
AAATGTCAGCAAGATCTTCT+CGG - Chr6:20283590-20283609 MsG0680031424.01.T01:CDS 35.0%
AACAGTGTAAGAAGCAGTTA+TGG - Chr6:20277518-20277537 MsG0680031424.01.T01:three_prime_UTR 35.0%
AACTCTCGAGGACAAATTTA+GGG - Chr6:20283919-20283938 MsG0680031424.01.T01:CDS 35.0%
ACATAAGTGCAAAAGTTCAG+GGG - Chr6:20280773-20280792 MsG0680031424.01.T01:intron 35.0%
ACATAAGTGCAAAAGTTCAG+GGG + Chr6:20280792-20280773 None:intergenic 35.0%
ACATGTCACATATCCACATT+AGG - Chr6:20282887-20282906 MsG0680031424.01.T01:intron 35.0%
ACGGTTCTTCATCGAATATA+CGG - Chr6:20278139-20278158 MsG0680031424.01.T01:intron 35.0%
ACTTATCCTGTTATCCAATG+AGG + Chr6:20279007-20279026 None:intergenic 35.0%
AGAATTGTAACTGTTGGTGT+CGG - Chr6:20282286-20282305 MsG0680031424.01.T01:intron 35.0%
AGTTAAGGATTCAACAAGCT+AGG + Chr6:20282691-20282710 None:intergenic 35.0%
ATAATCCACAAGCTCTACAA+GGG + Chr6:20277801-20277820 None:intergenic 35.0%
ATCCCATTTCTTATTCTACG+AGG + Chr6:20278684-20278703 None:intergenic 35.0%
ATGCATTTCGGTTTATGAAG+AGG + Chr6:20278349-20278368 None:intergenic 35.0%
ATGGGCTTTCAAAGAATGAA+AGG - Chr6:20280441-20280460 MsG0680031424.01.T01:intron 35.0%
ATTACATGAAGAGACGACTT+TGG + Chr6:20283092-20283111 None:intergenic 35.0%
ATTATATCTACTCAAGTGGG+GGG - Chr6:20281989-20282008 MsG0680031424.01.T01:intron 35.0%
ATTTATTGTCAAGCTTCGGA+CGG + Chr6:20283574-20283593 None:intergenic 35.0%
CAACAAAATGCAAGTTAGAG+GGG + Chr6:20282921-20282940 None:intergenic 35.0%
CAATGAACTTCTCCAATTGT+AGG - Chr6:20281473-20281492 MsG0680031424.01.T01:intron 35.0%
CACAAAGTCAATAATCCAAG+TGG + Chr6:20279703-20279722 None:intergenic 35.0%
CACACATTGTGAAAAATAGG+GGG - Chr6:20279402-20279421 MsG0680031424.01.T01:intron 35.0%
CACATAAGTGCAAAAGTTCA+GGG - Chr6:20280772-20280791 MsG0680031424.01.T01:intron 35.0%
CACATAAGTGCAAAAGTTCA+GGG + Chr6:20280791-20280772 None:intergenic 35.0%
CATGTTATGAATAGAGTGAG+AGG + Chr6:20279099-20279118 None:intergenic 35.0%
CATTATATCTACTCAAGTGG+GGG - Chr6:20281988-20282007 MsG0680031424.01.T01:intron 35.0%
CCATTCAGATAAACTGCTAT+AGG - Chr6:20279340-20279359 MsG0680031424.01.T01:intron 35.0%
CCTATAGCAGTTTATCTGAA+TGG + Chr6:20279343-20279362 None:intergenic 35.0%
CTATGATCCATTATTCTGGA+TGG - Chr6:20283351-20283370 MsG0680031424.01.T01:CDS 35.0%
CTCACTCTTAAACCTTACTT+TGG + Chr6:20282771-20282790 None:intergenic 35.0%
CTCTTCTTCATCCATATCAA+AGG + Chr6:20277942-20277961 None:intergenic 35.0%
GAAAGTTGCAATCAATGAAC+CGG - Chr6:20283734-20283753 MsG0680031424.01.T01:CDS 35.0%
GAGAGTCTTTACATGATAAG+TGG - Chr6:20282965-20282984 MsG0680031424.01.T01:CDS 35.0%
GATAACAAATAGTTCGAAGG+AGG - Chr6:20278471-20278490 MsG0680031424.01.T01:intron 35.0%
GATTCTTGAAGCCTTTGATA+TGG - Chr6:20277928-20277947 MsG0680031424.01.T01:CDS 35.0%
GCATTATATCTACTCAAGTG+GGG - Chr6:20281987-20282006 MsG0680031424.01.T01:intron 35.0%
GGTTTCATGTGTAATTGAGT+TGG - Chr6:20284284-20284303 MsG0680031424.01.T01:intron 35.0%
GTCAACAAAATGCAAGTTAG+AGG + Chr6:20282923-20282942 None:intergenic 35.0%
GTTAACAGAAAAATTGACGG+AGG - Chr6:20280820-20280839 MsG0680031424.01.T01:intron 35.0%
GTTAACAGAAAAATTGACGG+AGG + Chr6:20280839-20280820 None:intergenic 35.0%
GTTTAGGCAGACATTTATTG+AGG - Chr6:20279657-20279676 MsG0680031424.01.T01:intron 35.0%
TAACAGAAAAATTGACGGAG+GGG - Chr6:20280822-20280841 MsG0680031424.01.T01:intron 35.0%
TAACAGAAAAATTGACGGAG+GGG + Chr6:20280841-20280822 None:intergenic 35.0%
TAACGTTATGCAATTTCAGG+GGG + Chr6:20279874-20279893 None:intergenic 35.0%
TACTTAGTGTTGTCAAGCTA+TGG + Chr6:20278800-20278819 None:intergenic 35.0%
TAGGATCCTCTGAATCAAAA+AGG + Chr6:20278099-20278118 None:intergenic 35.0%
TAGTGCCAAATAATATACCG+TGG - Chr6:20281267-20281286 MsG0680031424.01.T01:intron 35.0%
TCATAAGACTCTATGAAGCA+CGG + Chr6:20277204-20277223 None:intergenic 35.0%
TCATGTGACTGAAAAGTCAT+GGG - Chr6:20282041-20282060 MsG0680031424.01.T01:intron 35.0%
TCCCATTTCTTATTCTACGA+GGG + Chr6:20278683-20278702 None:intergenic 35.0%
TCTCAAAGTTGTGTTTGTGT+TGG - Chr6:20277121-20277140 MsG0680031424.01.T01:three_prime_UTR 35.0%
TCTTACTTAAGGAAGAACTC+TGG - Chr6:20280142-20280161 MsG0680031424.01.T01:intron 35.0%
TGAAGTAACTAAAGGAAAGC+TGG - Chr6:20280566-20280585 MsG0680031424.01.T01:intron 35.0%
TGACGAAACTTACAATTTCG+GGG - Chr6:20280912-20280931 MsG0680031424.01.T01:intron 35.0%
TGACGAAACTTACAATTTCG+GGG + Chr6:20280931-20280912 None:intergenic 35.0%
TGATACATCGGTATGCATTT+CGG + Chr6:20278361-20278380 None:intergenic 35.0%
TGATGCAATAAGATAACTGC+TGG + Chr6:20278384-20278403 None:intergenic 35.0%
TGATGTTTCGTTAACTACAG+GGG - Chr6:20280883-20280902 MsG0680031424.01.T01:intron 35.0%
TGCAGAGTTTCAAAAATGCA+TGG - Chr6:20278540-20278559 MsG0680031424.01.T01:intron 35.0%
TGCATGACAAAAGTTCAAGT+TGG - Chr6:20280600-20280619 MsG0680031424.01.T01:intron 35.0%
TTAATAGACCGCTATTGTAC+GGG + Chr6:20278838-20278857 None:intergenic 35.0%
TTACTTTCAAAACCTCACTC+GGG - Chr6:20281010-20281029 MsG0680031424.01.T01:intron 35.0%
TTATCAAATAGAGGCTGTAG+CGG + Chr6:20279552-20279571 None:intergenic 35.0%
TTATTGCATCACACAGTTTG+TGG - Chr6:20278393-20278412 MsG0680031424.01.T01:intron 35.0%
TTCAACATTCCTCGAAGTTT+AGG - Chr6:20279641-20279660 MsG0680031424.01.T01:intron 35.0%
TTCAAGGATCAATCCAATTG+AGG + Chr6:20283810-20283829 None:intergenic 35.0%
TTGATGTTTCGTTAACTACG+GGG + Chr6:20279848-20279867 None:intergenic 35.0%
TTGATTGCCTTTCTGATGAA+CGG + Chr6:20278184-20278203 None:intergenic 35.0%
TTGTGTATGAGCTTCTTCTT+AGG - Chr6:20277996-20278015 MsG0680031424.01.T01:CDS 35.0%
TTTGTTGACATCTCCTTATG+TGG - Chr6:20282934-20282953 MsG0680031424.01.T01:CDS 35.0%
! AAGAAGCATGATGTGATTAG+TGG - Chr6:20280650-20280669 MsG0680031424.01.T01:intron 35.0%
! AGAGTTTTTCATCTGGTCAA+GGG + Chr6:20283905-20283924 None:intergenic 35.0%
! CAAGGCATCTTATAGAACAT+AGG - Chr6:20280502-20280521 MsG0680031424.01.T01:intron 35.0%
! GCAGAACTCTTGGAAATTTT+GGG - Chr6:20278253-20278272 MsG0680031424.01.T01:intron 35.0%
! TATTGTTTTCTGTACCAGGA+TGG + Chr6:20283168-20283187 None:intergenic 35.0%
! TCTCAAACATGATTTTGCCA+CGG + Chr6:20281287-20281306 None:intergenic 35.0%
! TCTCAAGCCACTGTTTATTT+TGG - Chr6:20284014-20284033 MsG0680031424.01.T01:CDS 35.0%
! TCTTTTCGCTAACTTTGCAT+CGG + Chr6:20278041-20278060 None:intergenic 35.0%
! TGAGTTTGGAGTAAACGTAT+TGG - Chr6:20282206-20282225 MsG0680031424.01.T01:intron 35.0%
! TGCAGAACTCTTGGAAATTT+TGG - Chr6:20278252-20278271 MsG0680031424.01.T01:intron 35.0%
!! AACTAAAGGAAAGCTGGTTT+TGG - Chr6:20280572-20280591 MsG0680031424.01.T01:intron 35.0%
!! CAAACACAACTTTGAGACAA+TGG + Chr6:20277118-20277137 None:intergenic 35.0%
!! GATTCTAATTCGAGTATTGG+AGG - Chr6:20277572-20277591 MsG0680031424.01.T01:three_prime_UTR 35.0%
!! GCTTTGTTGTTTGGTTGTAA+TGG + Chr6:20280409-20280428 None:intergenic 35.0%
!! GTTAGACCTTTTTGATTCAG+AGG - Chr6:20278090-20278109 MsG0680031424.01.T01:intron 35.0%
!! TCAAGCCATTTTGTGATTCT+TGG + Chr6:20284181-20284200 None:intergenic 35.0%
!! TCACTTTAAAACACACTCCT+TGG + Chr6:20277357-20277376 None:intergenic 35.0%
!!! ATGCATTTTTGAAACTCTGC+AGG + Chr6:20278541-20278560 None:intergenic 35.0%
!!! GGAGTGTGTTTTAAAGTGAT+TGG - Chr6:20277358-20277377 MsG0680031424.01.T01:three_prime_UTR 35.0%
!!! TGCCTTATTTTTCCTTAGTG+TGG - Chr6:20278903-20278922 MsG0680031424.01.T01:intron 35.0%
!!! TTGAATTTTTTGGCGTTGCA+GGG - Chr6:20283825-20283844 MsG0680031424.01.T01:CDS 35.0%
AAATGTCTGCCTAAACTTCG+AGG + Chr6:20279653-20279672 None:intergenic 40.0%
AAATTCGGCTTCTCCGAATT+CGG + Chr6:20277689-20277708 None:intergenic 40.0%
AACAGAAAAATTGACGGAGG+GGG - Chr6:20280823-20280842 MsG0680031424.01.T01:intron 40.0%
AACAGAAAAATTGACGGAGG+GGG + Chr6:20280842-20280823 None:intergenic 40.0%
AACAGCCTCTTGTGTAAAAC+AGG - Chr6:20282077-20282096 MsG0680031424.01.T01:intron 40.0%
AAGAGTGAGTATACGTGGAT+GGG - Chr6:20282782-20282801 MsG0680031424.01.T01:intron 40.0%
AAGGATTCAACAAGCTAGGA+AGG + Chr6:20282687-20282706 None:intergenic 40.0%
AATGCTTCCCCTATAATGAC+AGG - Chr6:20282719-20282738 MsG0680031424.01.T01:intron 40.0%
ACAGCCTCTTGTGTAAAACA+GGG - Chr6:20282078-20282097 MsG0680031424.01.T01:intron 40.0%
ACCCCTCGTAGAATAAGAAA+TGG - Chr6:20278678-20278697 MsG0680031424.01.T01:intron 40.0%
ACCTAAGAAGGGATCGAAAT+CGG - Chr6:20277436-20277455 MsG0680031424.01.T01:three_prime_UTR 40.0%
ACGAAACTTACAATTTCGGG+GGG - Chr6:20280914-20280933 MsG0680031424.01.T01:intron 40.0%
ACGAAACTTACAATTTCGGG+GGG + Chr6:20280933-20280914 None:intergenic 40.0%
AGAAATCGTGAAAACCGTGT+CGG - Chr6:20277862-20277881 MsG0680031424.01.T01:CDS 40.0%
AGAGAGGGATTACTTGAAGA+CGG - Chr6:20278120-20278139 MsG0680031424.01.T01:intron 40.0%
AGCTCATTCAACTTCTGGTA+AGG - Chr6:20283773-20283792 MsG0680031424.01.T01:CDS 40.0%
AGGGGAATTTGAACCTAATG+TGG + Chr6:20282903-20282922 None:intergenic 40.0%
AGTAGCATCAATAAGGACCA+AGG - Chr6:20277337-20277356 MsG0680031424.01.T01:three_prime_UTR 40.0%
AGTTACGTCGAATGAATCAG+AGG - Chr6:20280196-20280215 MsG0680031424.01.T01:intron 40.0%
ATAAGTGCAAAAGTTCAGGG+GGG - Chr6:20280775-20280794 MsG0680031424.01.T01:intron 40.0%
ATAAGTGCAAAAGTTCAGGG+GGG + Chr6:20280794-20280775 None:intergenic 40.0%
ATATGAGACATAGGCCTCAT+TGG - Chr6:20278990-20279009 MsG0680031424.01.T01:intron 40.0%
ATCGAATGTCTACCACACTA+AGG + Chr6:20278918-20278937 None:intergenic 40.0%
ATGCTTCCCCTATAATGACA+GGG - Chr6:20282720-20282739 MsG0680031424.01.T01:intron 40.0%
ATGTTTCGTTAACTACAGGG+GGG - Chr6:20280885-20280904 MsG0680031424.01.T01:intron 40.0%
ATTGCAGGAATTGTTCCACT+TGG - Chr6:20279685-20279704 MsG0680031424.01.T01:intron 40.0%
CAATGGTATTGCAGAACTCT+TGG - Chr6:20278243-20278262 MsG0680031424.01.T01:intron 40.0%
CACTGTGTTTAGTGCATATC+CGG - Chr6:20281103-20281122 MsG0680031424.01.T01:intron 40.0%
CAGAATGCATGAGTAATAGC+AGG + Chr6:20281141-20281160 None:intergenic 40.0%
CATAAGTGCAAAAGTTCAGG+GGG - Chr6:20280774-20280793 MsG0680031424.01.T01:intron 40.0%
CATAAGTGCAAAAGTTCAGG+GGG + Chr6:20280793-20280774 None:intergenic 40.0%
CATAATCCACAAGCTCTACA+AGG + Chr6:20277802-20277821 None:intergenic 40.0%
CCCATTTCTTATTCTACGAG+GGG + Chr6:20278682-20278701 None:intergenic 40.0%
CCCCTCGTAGAATAAGAAAT+GGG - Chr6:20278679-20278698 MsG0680031424.01.T01:intron 40.0%
CGAAGGAGGTTATGTTCTTA+GGG - Chr6:20278485-20278504 MsG0680031424.01.T01:intron 40.0%
CGCTTCATCTTCTCTGAATT+TGG + Chr6:20283649-20283668 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG - Chr6:20282109-20282128 MsG0680031424.01.T01:intron 40.0%
CTCTCAACACTAACCACATA+AGG + Chr6:20282950-20282969 None:intergenic 40.0%
CTCTTGTGTAAAACAGGGTA+AGG - Chr6:20282083-20282102 MsG0680031424.01.T01:intron 40.0%
CTGCAACGCCAAAAAATTCA+AGG + Chr6:20283826-20283845 None:intergenic 40.0%
CTTAAGTGGCATATTCCGAT+TGG - Chr6:20282856-20282875 MsG0680031424.01.T01:intron 40.0%
GAAAATAATGAAGGAGGAGG+AGG - Chr6:20277461-20277480 MsG0680031424.01.T01:three_prime_UTR 40.0%
GAAGGAGGTTATGTTCTTAG+GGG - Chr6:20278486-20278505 MsG0680031424.01.T01:intron 40.0%
GACATGTCATCAACACCAAT+CGG + Chr6:20282874-20282893 None:intergenic 40.0%
GACCATGAGAGTGAAAATGT+AGG + Chr6:20282525-20282544 None:intergenic 40.0%
GACGAAACTTACAATTTCGG+GGG - Chr6:20280913-20280932 MsG0680031424.01.T01:intron 40.0%
GACGAAACTTACAATTTCGG+GGG + Chr6:20280932-20280913 None:intergenic 40.0%
GAGAGTGAAAATGTAGGACT+TGG + Chr6:20282519-20282538 None:intergenic 40.0%
GATAACTGCTGGTGATACAT+CGG + Chr6:20278373-20278392 None:intergenic 40.0%
GATGTTTCGTTAACTACAGG+GGG - Chr6:20280884-20280903 MsG0680031424.01.T01:intron 40.0%
GATTATGTTTCCTCGGCTAA+TGG - Chr6:20277815-20277834 MsG0680031424.01.T01:CDS 40.0%
GCAAATCAAATAGACCCTAG+TGG + Chr6:20282547-20282566 None:intergenic 40.0%
GCACATAAGTGCAAAAGTTC+AGG - Chr6:20280771-20280790 MsG0680031424.01.T01:intron 40.0%
GCACATAAGTGCAAAAGTTC+AGG + Chr6:20280790-20280771 None:intergenic 40.0%
GCACTTGTGATCATTTCCTT+TGG - Chr6:20281354-20281373 MsG0680031424.01.T01:intron 40.0%
GCCAGTATTTCAATAATCCG+CGG + Chr6:20278450-20278469 None:intergenic 40.0%
GCCGATAACAAATAGTTCGA+AGG - Chr6:20278468-20278487 MsG0680031424.01.T01:intron 40.0%
GCTGTTCAACCTTAGTAGTT+TGG - Chr6:20281911-20281930 MsG0680031424.01.T01:intron 40.0%
GGAAGGATTCATCACCAATA+AGG + Chr6:20282670-20282689 None:intergenic 40.0%
GGTTTAAGAGTGAGTATACG+TGG - Chr6:20282777-20282796 MsG0680031424.01.T01:intron 40.0%
GTACATCCCCTGTCATTATA+GGG + Chr6:20282730-20282749 None:intergenic 40.0%
GTATCCACCATCCAGAATAA+TGG + Chr6:20283361-20283380 None:intergenic 40.0%
GTCATGTGACTGAAAAGTCA+TGG - Chr6:20282040-20282059 MsG0680031424.01.T01:intron 40.0%
TAAGAGTGAGTATACGTGGA+TGG - Chr6:20282781-20282800 MsG0680031424.01.T01:intron 40.0%
TAATAGACCGCTATTGTACG+GGG + Chr6:20278837-20278856 None:intergenic 40.0%
TACAAATGATGCCAGATGTG+TGG - Chr6:20279317-20279336 MsG0680031424.01.T01:intron 40.0%
TACATCCCCTGTCATTATAG+GGG + Chr6:20282729-20282748 None:intergenic 40.0%
TCATTCAACTTCTGGTAAGG+TGG - Chr6:20283776-20283795 MsG0680031424.01.T01:CDS 40.0%
TCCAAAGCAGGTAAGACTAT+AGG + Chr6:20283522-20283541 None:intergenic 40.0%
TCGAAGGAGGTTATGTTCTT+AGG - Chr6:20278484-20278503 MsG0680031424.01.T01:intron 40.0%
TCTATAGCACTGTAGCATAG+CGG + Chr6:20279439-20279458 None:intergenic 40.0%
TGAATTGCATGGGACTTGAA+TGG - Chr6:20283988-20284007 MsG0680031424.01.T01:CDS 40.0%
TGATCCATTATTCTGGATGG+TGG - Chr6:20283354-20283373 MsG0680031424.01.T01:CDS 40.0%
TGATGTTTCGTTAACTACGG+GGG + Chr6:20279847-20279866 None:intergenic 40.0%
TGGAATTCACTTTCTGTAGC+TGG - Chr6:20284034-20284053 MsG0680031424.01.T01:CDS 40.0%
TGGACTACGGGATAATGAAA+AGG + Chr6:20283148-20283167 None:intergenic 40.0%
TGTACATCCCCTGTCATTAT+AGG + Chr6:20282731-20282750 None:intergenic 40.0%
TTAACTGCGTCTGAATTTGC+AGG - Chr6:20283419-20283438 MsG0680031424.01.T01:CDS 40.0%
TTCAAGTAATCCCTCTCTCT+AGG + Chr6:20278118-20278137 None:intergenic 40.0%
TTTGCTTGTCTTGCAGATTG+AGG - Chr6:20277293-20277312 MsG0680031424.01.T01:three_prime_UTR 40.0%
! AAGCATTGTAGCGGAAGTTA+AGG + Chr6:20282706-20282725 None:intergenic 40.0%
! CAATCGGAATATGCCACTTA+AGG + Chr6:20282858-20282877 None:intergenic 40.0%
! CTTACCCTGTTTTACACAAG+AGG + Chr6:20282085-20282104 None:intergenic 40.0%
! CTTGAGCAGTTCACATTTTC+AGG - Chr6:20278591-20278610 MsG0680031424.01.T01:intron 40.0%
! GAGAGTTTTTCATCTGGTCA+AGG + Chr6:20283906-20283925 None:intergenic 40.0%
! GCTTGTGGATTATGTTTCCT+CGG - Chr6:20277808-20277827 MsG0680031424.01.T01:CDS 40.0%
! GTCCTACATTTTCACTCTCA+TGG - Chr6:20282520-20282539 MsG0680031424.01.T01:intron 40.0%
! TAGCAGAAGCACAAAACCAA+AGG + Chr6:20281373-20281392 None:intergenic 40.0%
! TCCGCGGATTATTGAAATAC+TGG - Chr6:20278446-20278465 MsG0680031424.01.T01:intron 40.0%
! TCCTATAGTCTTACCTGCTT+TGG - Chr6:20283518-20283537 MsG0680031424.01.T01:CDS 40.0%
! TTGTCAAATACCGGCTATAG+TGG + Chr6:20279463-20279482 None:intergenic 40.0%
!! AAACGCATGACTTGGCTTTT+GGG - Chr6:20283059-20283078 MsG0680031424.01.T01:CDS 40.0%
!! TAAACGCATGACTTGGCTTT+TGG - Chr6:20283058-20283077 MsG0680031424.01.T01:CDS 40.0%
!! TCAACTGCTTCATCGATTTC+AGG - Chr6:20277545-20277564 MsG0680031424.01.T01:three_prime_UTR 40.0%
!! TGCAATCAATGAACCGGTTT+TGG - Chr6:20283740-20283759 MsG0680031424.01.T01:CDS 40.0%
!! TTATAGGGGAAGCATTGTAG+CGG + Chr6:20282715-20282734 None:intergenic 40.0%
!!! CTTGAATTTTTTGGCGTTGC+AGG - Chr6:20283824-20283843 MsG0680031424.01.T01:CDS 40.0%
!!! GCAGTTCACATTTTCAGGTT+TGG - Chr6:20278596-20278615 MsG0680031424.01.T01:intron 40.0%
!!! GTGTGCATGAACATTGGTTT+TGG - Chr6:20279258-20279277 MsG0680031424.01.T01:intron 40.0%
!!! TCAGTATGGCTTTTAAAGCG+AGG + Chr6:20281650-20281669 None:intergenic 40.0%
!!! TCTTTAGGACTCTGCTTTTC+TGG - Chr6:20279221-20279240 MsG0680031424.01.T01:intron 40.0%
AAACTTACAATTTCGGGGGG+GGG - Chr6:20280917-20280936 MsG0680031424.01.T01:intron 45.0%
AAAGTCATGGGTTCAAGTCC+TGG - Chr6:20282053-20282072 MsG0680031424.01.T01:intron 45.0%
AAGTGGAAGTTGAACCTCAG+AGG - Chr6:20282982-20283001 MsG0680031424.01.T01:CDS 45.0%
AATAATGAAGGAGGAGGAGG+AGG - Chr6:20277464-20277483 MsG0680031424.01.T01:three_prime_UTR 45.0%
AATAGACCGCTATTGTACGG+GGG + Chr6:20278836-20278855 None:intergenic 45.0%
AGAGTGAGTATACGTGGATG+GGG - Chr6:20282783-20282802 MsG0680031424.01.T01:intron 45.0%
AGCTGACGAAATGCAACTTC+AGG + Chr6:20281189-20281208 None:intergenic 45.0%
AGCTTGTGCTCTTCTTTCAG+TGG + Chr6:20278304-20278323 None:intergenic 45.0%
AGGACTCTCTTTCTCCACAT+GGG - Chr6:20279360-20279379 MsG0680031424.01.T01:intron 45.0%
AGTAAACTTGCCATTAGCCG+AGG + Chr6:20277828-20277847 None:intergenic 45.0%
ATCTGAGGGATGTCCTTAAG+TGG - Chr6:20282842-20282861 MsG0680031424.01.T01:intron 45.0%
ATGTATCCCCCGTACAATAG+CGG - Chr6:20278827-20278846 MsG0680031424.01.T01:intron 45.0%
ATGTTTCGTTAACTACGGGG+GGG + Chr6:20279845-20279864 None:intergenic 45.0%
ATTCAGAGGATCCTAGAGAG+AGG - Chr6:20278104-20278123 MsG0680031424.01.T01:intron 45.0%
ATTTGCAAGTAAGGCCATGC+AGG + Chr6:20277977-20277996 None:intergenic 45.0%
CAAATGAAAACACCCCCATG+TGG + Chr6:20279377-20279396 None:intergenic 45.0%
CAACTTTACTAGTTGCGCCA+AGG + Chr6:20282018-20282037 None:intergenic 45.0%
CAGAGTGTGTGCATGAACAT+TGG - Chr6:20279252-20279271 MsG0680031424.01.T01:intron 45.0%
CATAGGCCTCATTGGATAAC+AGG - Chr6:20278998-20279017 MsG0680031424.01.T01:intron 45.0%
CCAAGAGCTCATTCAACTTC+TGG - Chr6:20283768-20283787 MsG0680031424.01.T01:CDS 45.0%
CCAGAAGTTGAATGAGCTCT+TGG + Chr6:20283771-20283790 None:intergenic 45.0%
CCGGAACAAATTTACCGACA+CGG + Chr6:20277879-20277898 None:intergenic 45.0%
CGAAACTTACAATTTCGGGG+GGG - Chr6:20280915-20280934 MsG0680031424.01.T01:intron 45.0%
CGAAACTTACAATTTCGGGG+GGG + Chr6:20280934-20280915 None:intergenic 45.0%
CGGATATGCACTAAACACAG+TGG + Chr6:20281105-20281124 None:intergenic 45.0%
CTGCGATTAAACGCATGACT+TGG - Chr6:20283051-20283070 MsG0680031424.01.T01:CDS 45.0%
CTTGCTGATACGATTATCCG+CGG - Chr6:20278430-20278449 MsG0680031424.01.T01:intron 45.0%
GAAACTTACAATTTCGGGGG+GGG - Chr6:20280916-20280935 MsG0680031424.01.T01:intron 45.0%
GACCAATACCAAACACGACA+TGG + Chr6:20277174-20277193 None:intergenic 45.0%
GACCAGATGAAAAACTCTCG+AGG - Chr6:20283907-20283926 MsG0680031424.01.T01:CDS 45.0%
GACCATGTCGTGTTTGGTAT+TGG - Chr6:20277169-20277188 MsG0680031424.01.T01:three_prime_UTR 45.0%
GATGTTTCGTTAACTACGGG+GGG + Chr6:20279846-20279865 None:intergenic 45.0%
GCGGAAAATAATGAAGGAGG+AGG - Chr6:20277458-20277477 MsG0680031424.01.T01:three_prime_UTR 45.0%
GCGTACAATACACCAAATGG+TGG - Chr6:20282108-20282127 MsG0680031424.01.T01:intron 45.0%
GCTCTTGGAGAAACCAAAAC+CGG + Chr6:20283756-20283775 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - Chr6:20282105-20282124 MsG0680031424.01.T01:intron 45.0%
GGATGAAGAAGAGCCTTCAA+TGG - Chr6:20277949-20277968 MsG0680031424.01.T01:CDS 45.0%
TAAGAAGGGATCGAAATCGG+CGG - Chr6:20277439-20277458 MsG0680031424.01.T01:three_prime_UTR 45.0%
TAGGACTCTCTTTCTCCACA+TGG - Chr6:20279359-20279378 MsG0680031424.01.T01:intron 45.0%
TATCTGAATGGCCACACATC+TGG + Chr6:20279331-20279350 None:intergenic 45.0%
TCAAGAATCTTGTTCTCGCG+AGG + Chr6:20277917-20277936 None:intergenic 45.0%
TCGGCGGAAAATAATGAAGG+AGG - Chr6:20277455-20277474 MsG0680031424.01.T01:three_prime_UTR 45.0%
TGAAGTCAAAACACGAAGCC+AGG - Chr6:20283682-20283701 MsG0680031424.01.T01:CDS 45.0%
TGACGAAATGCAACTTCAGG+AGG + Chr6:20281186-20281205 None:intergenic 45.0%
TGCTATAGAGCCACTATAGC+CGG - Chr6:20279450-20279469 MsG0680031424.01.T01:intron 45.0%
TGCTTCCCCTATAATGACAG+GGG - Chr6:20282721-20282740 MsG0680031424.01.T01:intron 45.0%
TTCACTCTCATGGTCCACTA+GGG - Chr6:20282530-20282549 MsG0680031424.01.T01:intron 45.0%
TTCAGAGGATCCTAGAGAGA+GGG - Chr6:20278105-20278124 MsG0680031424.01.T01:intron 45.0%
TTCCTGCAACCAATGCATTG+TGG + Chr6:20282412-20282431 None:intergenic 45.0%
TTTCACTCTCATGGTCCACT+AGG - Chr6:20282529-20282548 MsG0680031424.01.T01:intron 45.0%
TTTGCAAGTAAGGCCATGCA+GGG + Chr6:20277976-20277995 None:intergenic 45.0%
! CCGTGTCGGTAAATTTGTTC+CGG - Chr6:20277876-20277895 MsG0680031424.01.T01:CDS 45.0%
! CTGAGTTGAACGTCACATGA+TGG - Chr6:20283122-20283141 MsG0680031424.01.T01:CDS 45.0%
! GTCCTCGAGAGTTTTTCATC+TGG + Chr6:20283912-20283931 None:intergenic 45.0%
! TGCTCAAGCAGCGTCTTATT+TGG + Chr6:20278579-20278598 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + Chr6:20282074-20282093 None:intergenic 45.0%
! TTTTCGCGACGTTCCGAATT+CGG - Chr6:20277673-20277692 MsG0680031424.01.T01:CDS 45.0%
!! TGGAAGCGCTTGGAAGAAAT+GGG - Chr6:20283705-20283724 MsG0680031424.01.T01:CDS 45.0%
!! TTCTGTACCAGGATGGACTA+CGG + Chr6:20283161-20283180 None:intergenic 45.0%
!!! AATTTTTTGGCGTTGCAGGG+TGG - Chr6:20283828-20283847 MsG0680031424.01.T01:CDS 45.0%
!! AAAAAAAATTAAAAGATTAT+AGG + Chr6:20281515-20281534 None:intergenic 5.0%
!! AAAAAAATTAAAAGATTATA+GGG + Chr6:20281514-20281533 None:intergenic 5.0%
AAATTCAACCCCGGCCTCTA+TGG + Chr6:20283013-20283032 None:intergenic 50.0%
AACTTACAATTTCGGGGGGG+GGG - Chr6:20280918-20280937 MsG0680031424.01.T01:intron 50.0%
AAGCGCTTGGAAGAAATGGG+AGG - Chr6:20283708-20283727 MsG0680031424.01.T01:CDS 50.0%
AATCGCAGACAAAGCCTGTG+AGG + Chr6:20283039-20283058 None:intergenic 50.0%
ACGACATGGTCACTGACACA+CGG + Chr6:20277160-20277179 None:intergenic 50.0%
ACTGCGTCTGAATTTGCAGG+TGG - Chr6:20283422-20283441 MsG0680031424.01.T01:CDS 50.0%
AGAATCTTGTTCTCGCGAGG+TGG + Chr6:20277914-20277933 None:intergenic 50.0%
AGAGGTCTTTCCATAGAGGC+CGG - Chr6:20283000-20283019 MsG0680031424.01.T01:CDS 50.0%
AGCAAAATGCACGTAGCCAC+TGG - Chr6:20283541-20283560 MsG0680031424.01.T01:CDS 50.0%
AGTCAAAACACGAAGCCAGG+TGG - Chr6:20283685-20283704 MsG0680031424.01.T01:CDS 50.0%
AGTGAGTATACGTGGATGGG+GGG - Chr6:20282785-20282804 MsG0680031424.01.T01:intron 50.0%
ATGCACTCCTCGTAGAATGC+AGG + Chr6:20283624-20283643 None:intergenic 50.0%
CACTGATCCTGCATTCTACG+AGG - Chr6:20283614-20283633 MsG0680031424.01.T01:CDS 50.0%
CATTATCCCGTAGTCCATCC+TGG - Chr6:20283151-20283170 MsG0680031424.01.T01:CDS 50.0%
CCTCAGAGGTCTTTCCATAG+AGG - Chr6:20282996-20283015 MsG0680031424.01.T01:CDS 50.0%
CCTCTATGGAAAGACCTCTG+AGG + Chr6:20282999-20283018 None:intergenic 50.0%
CGACACTGACATGTTGACAC+CGG + Chr6:20284135-20284154 None:intergenic 50.0%
CTTCTGGTAAGGTGGCAAGT+AGG - Chr6:20283784-20283803 MsG0680031424.01.T01:CDS 50.0%
GACTCTCTTTCTCCACATGG+GGG - Chr6:20279362-20279381 MsG0680031424.01.T01:intron 50.0%
GAGGTGGAGTAGTCAATGTC+CGG + Chr6:20277898-20277917 None:intergenic 50.0%
GAGTGAGTATACGTGGATGG+GGG - Chr6:20282784-20282803 MsG0680031424.01.T01:intron 50.0%
GGACTCTCTTTCTCCACATG+GGG - Chr6:20279361-20279380 MsG0680031424.01.T01:intron 50.0%
GGGTTGAATTTGAGCCTCAC+AGG - Chr6:20283022-20283041 MsG0680031424.01.T01:CDS 50.0%
GGTTATGTTCTTAGGGGAGC+TGG - Chr6:20278492-20278511 MsG0680031424.01.T01:intron 50.0%
GTCAGTGACCATGTCGTGTT+TGG - Chr6:20277163-20277182 MsG0680031424.01.T01:three_prime_UTR 50.0%
GTGAGGCTCAAATTCAACCC+CGG + Chr6:20283022-20283041 None:intergenic 50.0%
TTCGGAACGTCGCGAAAACT+CGG + Chr6:20277671-20277690 None:intergenic 50.0%
TTTAGTGCATATCCGGCTGC+TGG - Chr6:20281110-20281129 MsG0680031424.01.T01:intron 50.0%
! CGCTAACTTTGCATCGGTCT+CGG + Chr6:20278035-20278054 None:intergenic 50.0%
! CGGTGTCAACATGTCAGTGT+CGG - Chr6:20284133-20284152 MsG0680031424.01.T01:intron 50.0%
! CGTGCATTTTGCTCCAAAGC+AGG + Chr6:20283534-20283553 None:intergenic 50.0%
! GCATCGACCGTTCATCAGAA+AGG - Chr6:20278174-20278193 MsG0680031424.01.T01:intron 50.0%
! GCCGATTTCGATCCCTTCTT+AGG + Chr6:20277440-20277459 None:intergenic 50.0%
! GCTAACTTTGCATCGGTCTC+GGG + Chr6:20278034-20278053 None:intergenic 50.0%
! TTGAGTTGTTCACCCGAGTG+AGG + Chr6:20281025-20281044 None:intergenic 50.0%
!! CACCACAATGCATTGGTTGC+AGG - Chr6:20282407-20282426 MsG0680031424.01.T01:intron 50.0%
!! CATGACTTGGCTTTTGGGCT+CGG - Chr6:20283064-20283083 MsG0680031424.01.T01:CDS 50.0%
!! CGGAGAGGGCTTTGTTCTTA+TGG - Chr6:20283445-20283464 MsG0680031424.01.T01:CDS 50.0%
!! GTGGAAGCGCTTGGAAGAAA+TGG - Chr6:20283704-20283723 MsG0680031424.01.T01:CDS 50.0%
!! TCTGTACCAGGATGGACTAC+GGG + Chr6:20283160-20283179 None:intergenic 50.0%
AATGAAGGAGGAGGAGGAGG+AGG - Chr6:20277467-20277486 MsG0680031424.01.T01:three_prime_UTR 55.0%
ACTAGAGCTCCCGCATATGC+AGG + Chr6:20282149-20282168 None:intergenic 55.0%
ACTCAAGTGGGGGGTAACCT+TGG - Chr6:20281998-20282017 MsG0680031424.01.T01:intron 55.0%
ACTTACAATTTCGGGGGGGG+GGG - Chr6:20280919-20280938 MsG0680031424.01.T01:intron 55.0%
AGCCTTCAATGGACCCTGCA+TGG - Chr6:20277960-20277979 MsG0680031424.01.T01:CDS 55.0%
AGCGCTGCACCACAATGCAT+TGG - Chr6:20282400-20282419 MsG0680031424.01.T01:intron 55.0%
AGGGGAGCTGGAAGAAGTCT+TGG - Chr6:20278504-20278523 MsG0680031424.01.T01:intron 55.0%
AGGTCTTTCCATAGAGGCCG+GGG - Chr6:20283002-20283021 MsG0680031424.01.T01:CDS 55.0%
AGTATACGTGGATGGGGGGT+AGG - Chr6:20282789-20282808 MsG0680031424.01.T01:intron 55.0%
CACATGTGTCAGTGCCGTGT+CGG + Chr6:20277079-20277098 None:intergenic 55.0%
CCCGACACTGTTGTCAATCG+CGG - Chr6:20278718-20278737 MsG0680031424.01.T01:intron 55.0%
CCCGCGATTGACAACAGTGT+CGG + Chr6:20278722-20278741 None:intergenic 55.0%
CCGACACTGTTGTCAATCGC+GGG - Chr6:20278719-20278738 MsG0680031424.01.T01:intron 55.0%
CCGCGATTGACAACAGTGTC+GGG + Chr6:20278721-20278740 None:intergenic 55.0%
CTAGAGCTCCCGCATATGCA+GGG + Chr6:20282148-20282167 None:intergenic 55.0%
GAGGTCTTTCCATAGAGGCC+GGG - Chr6:20283001-20283020 MsG0680031424.01.T01:CDS 55.0%
GCAGACCCTTGTAGAGCTTG+TGG - Chr6:20277793-20277812 MsG0680031424.01.T01:CDS 55.0%
GCGTCTGAATTTGCAGGTGG+CGG - Chr6:20283425-20283444 MsG0680031424.01.T01:CDS 55.0%
GGTGGCAAGTAGGCCTCAAT+TGG - Chr6:20283794-20283813 MsG0680031424.01.T01:CDS 55.0%
TAGAGGCTGTAGCGGCACTA+TGG + Chr6:20279544-20279563 None:intergenic 55.0%
TCGCGGGTCGCAGAAAATAG+AGG - Chr6:20278735-20278754 MsG0680031424.01.T01:intron 55.0%
TGCATTGTGGTGCAGCGCTA+TGG + Chr6:20282399-20282418 None:intergenic 55.0%
TTCCAGAATGGATCCCCTGC+AGG - Chr6:20282360-20282379 MsG0680031424.01.T01:intron 55.0%
TTCTTCCAAGCGCTTCCACC+TGG + Chr6:20283703-20283722 None:intergenic 55.0%
TTGTCAAGCTTCGGACGGCT+TGG + Chr6:20283569-20283588 None:intergenic 55.0%
!! GAATTTGCAGGTGGCGGAGA+GGG - Chr6:20283431-20283450 MsG0680031424.01.T01:CDS 55.0%
!! TGAATTTGCAGGTGGCGGAG+AGG - Chr6:20283430-20283449 MsG0680031424.01.T01:CDS 55.0%
ACACACGGTGCAGTGACTGC+AGG + Chr6:20282479-20282498 None:intergenic 60.0%
ACCGTGTGTGCAGTGCTGCA+GGG - Chr6:20282490-20282509 MsG0680031424.01.T01:intron 60.0%
AGCCTGCAGGGGATCCATTC+TGG + Chr6:20282365-20282384 None:intergenic 60.0%
ATACGTGGATGGGGGGTAGG+AGG - Chr6:20282792-20282811 MsG0680031424.01.T01:intron 60.0%
CACACGGTGCAGTGACTGCA+GGG + Chr6:20282478-20282497 None:intergenic 60.0%
CATATGCAGGGTCCGGGAAG+GGG + Chr6:20282136-20282155 None:intergenic 60.0%
CTTACAATTTCGGGGGGGGG+GGG - Chr6:20280920-20280939 MsG0680031424.01.T01:intron 60.0%
CTTCCCGGACCCTGCATATG+CGG - Chr6:20282136-20282155 MsG0680031424.01.T01:intron 60.0%
GCATATGCAGGGTCCGGGAA+GGG + Chr6:20282137-20282156 None:intergenic 60.0%
GGCCATGCAGGGTCCATTGA+AGG + Chr6:20277965-20277984 None:intergenic 60.0%
TGCAGTGACTGCAGGGCCAT+TGG + Chr6:20282471-20282490 None:intergenic 60.0%
TTACAATTTCGGGGGGGGGG+GGG - Chr6:20280921-20280940 MsG0680031424.01.T01:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG - Chr6:20282137-20282156 MsG0680031424.01.T01:intron 60.0%
! ATGCGGGAGCTCTAGTGCAC+CGG - Chr6:20282153-20282172 MsG0680031424.01.T01:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - Chr6:20282121-20282140 MsG0680031424.01.T01:intron 60.0%
!! TAGCAGGAAGCACCAGCAGC+CGG + Chr6:20281125-20281144 None:intergenic 60.0%
!! TTCGGACGGCTTGGTTCCAG+TGG + Chr6:20283560-20283579 None:intergenic 60.0%
CACCGTGTGTGCAGTGCTGC+AGG - Chr6:20282489-20282508 MsG0680031424.01.T01:intron 65.0%
CCCCTGCAGCACTGCACACA+CGG + Chr6:20282494-20282513 None:intergenic 65.0%
CCGTGTGTGCAGTGCTGCAG+GGG - Chr6:20282491-20282510 MsG0680031424.01.T01:intron 65.0%
CGCATATGCAGGGTCCGGGA+AGG + Chr6:20282138-20282157 None:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+TGG + Chr6:20282123-20282142 None:intergenic 65.0%
CTCCCGCATATGCAGGGTCC+GGG + Chr6:20282142-20282161 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG + Chr6:20282143-20282162 None:intergenic 65.0%
GTGCAGTGCTGCAGCCTGCA+GGG + Chr6:20282377-20282396 None:intergenic 65.0%
TGCAGTGCTGCAGCCTGCAG+GGG + Chr6:20282376-20282395 None:intergenic 65.0%
! TGCGGGAGCTCTAGTGCACC+GGG - Chr6:20282154-20282173 MsG0680031424.01.T01:intron 65.0%
!! CGAAGCCAGGTGGAAGCGCT+TGG - Chr6:20283695-20283714 MsG0680031424.01.T01:CDS 65.0%
GGTGCAGTGCTGCAGCCTGC+AGG + Chr6:20282378-20282397 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr6 gene 20277068 20284407 20277068 ID=MsG0680031424.01;Name=MsG0680031424.01
Chr6 mRNA 20277068 20284407 20277068 ID=MsG0680031424.01.T01;Parent=MsG0680031424.01;Name=MsG0680031424.01.T01;_AED=0.37;_eAED=0.40;_QI=0|0|0.33|1|1|1|3|586|545
Chr6 exon 20277068 20278034 20277068 ID=MsG0680031424.01.T01:exon:12927;Parent=MsG0680031424.01.T01
Chr6 exon 20282914 20284053 20282914 ID=MsG0680031424.01.T01:exon:12926;Parent=MsG0680031424.01.T01
Chr6 exon 20284291 20284407 20284291 ID=MsG0680031424.01.T01:exon:12925;Parent=MsG0680031424.01.T01
Chr6 CDS 20284291 20284407 20284291 ID=MsG0680031424.01.T01:cds;Parent=MsG0680031424.01.T01
Chr6 CDS 20282914 20284053 20282914 ID=MsG0680031424.01.T01:cds;Parent=MsG0680031424.01.T01
Chr6 CDS 20277654 20278034 20277654 ID=MsG0680031424.01.T01:cds;Parent=MsG0680031424.01.T01
Chr6 three_prime_UTR 20277068 20277653 20277068 ID=MsG0680031424.01.T01:three_prime_utr;Parent=MsG0680031424.01.T01
Gene Sequence

>MsG0680031424.01.T01

ATGTCAGTCCGACACGGCACTGACACATGTGATTACATTGAATTATGCCATTGTCTCAAAGTTGTGTTTGTGTTGGCGTGTCAGAGTGACCGTGTGTCAGTGACCATGTCGTGTTTGATATTAAATAGGATACCTAAGAAGGGATCGAAATCGGCGGAAAATAATGAAGGAGGAGGAGGAGGAGGAACATCAACTTCTTCTTCATCTGCTTCAAACAGTGTAAGAAGCAGTTATGGAAATTCAACTGCTTCATCGATTTCAGGCGTTGATTCTAATTCGAGTATTGGAGGTGACATGCTTGTACAAGCAATGAATTCAAAATTGAATCTGAACGGCACTTTGTCAGCTTCTTATGAAGCTTTGCCGAGTTTTCGCGACGTTCCGAATTCGGAGAAGCCGAATTTGTTTATAAGAAAGTTGCAAATGTGCTGTGTTTTATTTGACTATACTGACCCTTCGAAGAACATTAAAGAAAAGGAGATTAAGCGGCAGACCCTTGTAGAGCTTGTGGATTATGTTTCCTCGGCTAATGGCAAGTTTACTGATATTATGATGCAAGAAATCGTGAAAACCGTGTCGGTAAATTTGTTCCGGACATTGACTACTCCACCTCGCGAGAACAAGATTCTTGAAGCCTTTGATATGGATGAAGAAGAGCCTTCAATGGACCCTGCATGGCCTTACTTGCAAATTGTGTATGAGCTTCTTCTTAGGTTTGTCACATCACCCGAGACCGATGCAAAGTTAGCGAAAAGATATGTTGATCATTCATTTGTTCTCAGATTGTTAGACCTTTTTGATTCAGAGGATCCTAGAGAGAGGGATTACTTGAAGACGGTTCTTCATCGAATATACGGCAAATTTATGGTGCATCGACCGTTCATCAGAAAGGCAATCAACAATATATTCTACCGTTTCATTTTTGAAACTGAGAAACACAATGGTATTGCAGAACTCTTGGAAATTTTGGGAAGTATAATCAACGGATTTGCTCTGCCACTGAAAGAAGAGCACAAGCTGTTTCTCGTGCGAGCTCTTATTCCTCTTCATAAACCGAAATGCATACCGATGTATCACCAGCAGTTATCTTATTGCATCACACAGTTTGTGGAAAAAGACTGCAAGCTTGCTGATACGATTATCCGCGGATTATTGAAATACTGGCCGATAACAAATAGTTCGAAGGAGGTTATGTTCTTAGGGGAGCTGGAAGAAGTCTTGGAAGCAACTCAACCTGCAGAGTTTCAAAAATGCATGGTGGCGGAGAGGGCTTTGTTCTTATGGAATAATGATCATATTGAGAACTTGATCAAACAGAACTACAAAATTATACTTCCTATAGTCTTACCTGCTTTGGAGCAAAATGCACGTAGCCACTGGAACCAAGCCGTCCGAAGCTTGACAATAAATGTCAGCAAGATCTTCTCGGACACTGATCCTGCATTCTACGAGGAGTGCATGACCAAATTCAGAGAAGATGAAGCGCAAGTGAATGATATGAAGTCAAAACACGAAGCCAGGTGGAAGCGCTTGGAAGAAATGGGAGGCATGAAAGTTGCAATCAATGAACCGGTTTTGGTTTCTCCAAGAGCTCATTCAACTTCTGGTAAGGTGGCAAGTAGGCCTCAATTGGATTGA
Protein sequence

>MsG0680031424.01.T01

MSVRHGTDTCDYIELCHCLKVVFVLACQSDRVSVTMSCLILNRIPKKGSKSAENNEGGGGGGTSTSSSSASNSVRSSYGNSTASSISGVDSNSSIGGDMLVQAMNSKLNLNGTLSASYEALPSFRDVPNSEKPNLFIRKLQMCCVLFDYTDPSKNIKEKEIKRQTLVELVDYVSSANGKFTDIMMQEIVKTVSVNLFRTLTTPPRENKILEAFDMDEEEPSMDPAWPYLQIVYELLLRFVTSPETDAKLAKRYVDHSFVLRLLDLFDSEDPRERDYLKTVLHRIYGKFMVHRPFIRKAINNIFYRFIFETEKHNGIAELLEILGSIINGFALPLKEEHKLFLVRALIPLHKPKCIPMYHQQLSYCITQFVEKDCKLADTIIRGLLKYWPITNSSKEVMFLGELEEVLEATQPAEFQKCMVAERALFLWNNDHIENLIKQNYKIILPIVLPALEQNARSHWNQAVRSLTINVSKIFSDTDPAFYEECMTKFREDEAQVNDMKSKHEARWKRLEEMGGMKVAINEPVLVSPRAHSTSGKVASRPQLD*