Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680032060.01.T01 | XP_013451833.1 | 88.323 | 668 | 50 | 8 | 1 | 662 | 1 | 646 | 0 | 820 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680032060.01.T01 | Q9C6K3 | 57.407 | 324 | 92 | 8 | 43 | 359 | 49 | 333 | 1.62E-93 | 304 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680032060.01.T01 | G8A0T0 | 88.323 | 668 | 50 | 8 | 1 | 662 | 1 | 646 | 0.0 | 820 |
Gene ID | Type | Classification |
---|---|---|
MsG0680032060.01.T01 | TF | Trihelix |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180004276.01 | MsG0680032060.01 | 0.809899 | 1.506506e-50 | 8.953440e-48 |
MsG0180005429.01 | MsG0680032060.01 | 0.842020 | 3.336794e-58 | 4.992955e-55 |
MsG0480021349.01 | MsG0680032060.01 | 0.823848 | 1.110730e-53 | 9.675592e-51 |
MsG0480022643.01 | MsG0680032060.01 | 0.801641 | 8.182906e-49 | 3.927793e-46 |
MsG0480023240.01 | MsG0680032060.01 | 0.812382 | 4.359585e-51 | 2.767798e-48 |
MsG0480023387.01 | MsG0680032060.01 | 0.801513 | 8.689395e-49 | 4.157598e-46 |
MsG0480018335.01 | MsG0680032060.01 | 0.804108 | 2.530685e-49 | 1.293805e-46 |
MsG0580027464.01 | MsG0680032060.01 | 0.802195 | 6.295950e-49 | 3.064880e-46 |
MsG0580029231.01 | MsG0680032060.01 | 0.811372 | 7.234381e-51 | 4.470346e-48 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680032060.01.T01 | MTR_6g035370 | 88.323 | 668 | 50 | 8 | 1 | 662 | 1 | 646 | 0.0 | 820 |
MsG0680032060.01.T01 | MTR_1g098900 | 55.248 | 686 | 224 | 18 | 1 | 658 | 1 | 631 | 0.0 | 603 |
MsG0680032060.01.T01 | MTR_1g098870 | 42.053 | 604 | 235 | 14 | 2 | 600 | 3 | 496 | 9.39e-125 | 381 |
MsG0680032060.01.T01 | MTR_2g026725 | 31.597 | 288 | 145 | 7 | 281 | 568 | 115 | 350 | 1.45e-34 | 135 |
MsG0680032060.01.T01 | MTR_2g026725 | 39.796 | 98 | 56 | 2 | 54 | 149 | 261 | 357 | 2.07e-16 | 82.0 |
MsG0680032060.01.T01 | MTR_1g492790 | 53.600 | 125 | 53 | 2 | 54 | 173 | 113 | 237 | 1.56e-34 | 138 |
MsG0680032060.01.T01 | MTR_1g492790 | 45.652 | 92 | 48 | 2 | 476 | 566 | 110 | 200 | 4.34e-19 | 91.3 |
MsG0680032060.01.T01 | MTR_1g060990 | 64.583 | 96 | 31 | 2 | 46 | 140 | 124 | 217 | 6.54e-32 | 130 |
MsG0680032060.01.T01 | MTR_1g060990 | 46.237 | 93 | 48 | 2 | 476 | 567 | 127 | 218 | 4.44e-19 | 91.3 |
MsG0680032060.01.T01 | MTR_1g060990 | 35.338 | 133 | 80 | 2 | 225 | 357 | 244 | 370 | 1.31e-14 | 77.4 |
MsG0680032060.01.T01 | MTR_7g114860 | 57.000 | 100 | 34 | 2 | 480 | 570 | 381 | 480 | 2.38e-28 | 119 |
MsG0680032060.01.T01 | MTR_7g114860 | 41.837 | 98 | 47 | 2 | 55 | 142 | 381 | 478 | 8.29e-16 | 80.9 |
MsG0680032060.01.T01 | MTR_1g081180 | 59.783 | 92 | 35 | 1 | 480 | 569 | 418 | 509 | 1.49e-26 | 114 |
MsG0680032060.01.T01 | MTR_1g081180 | 39.785 | 93 | 53 | 2 | 53 | 142 | 416 | 508 | 6.00e-14 | 75.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680032060.01.T01 | AT1G76880 | 57.407 | 324 | 92 | 8 | 43 | 359 | 49 | 333 | 1.65e-94 | 304 |
MsG0680032060.01.T01 | AT1G76880 | 65.584 | 154 | 38 | 3 | 458 | 598 | 382 | 533 | 1.89e-60 | 213 |
MsG0680032060.01.T01 | AT1G76880 | 46.739 | 92 | 48 | 1 | 50 | 140 | 403 | 494 | 3.68e-19 | 92.0 |
MsG0680032060.01.T01 | AT1G76880 | 47.253 | 91 | 47 | 1 | 479 | 569 | 60 | 149 | 6.13e-19 | 91.7 |
MsG0680032060.01.T01 | AT1G76890 | 49.062 | 320 | 130 | 7 | 52 | 357 | 38 | 338 | 4.62e-83 | 273 |
MsG0680032060.01.T01 | AT1G76890 | 63.309 | 139 | 41 | 2 | 459 | 597 | 378 | 506 | 4.77e-49 | 181 |
MsG0680032060.01.T01 | AT1G76890 | 44.565 | 92 | 50 | 1 | 52 | 142 | 394 | 485 | 1.80e-19 | 93.2 |
MsG0680032060.01.T01 | AT1G76890 | 43.182 | 88 | 49 | 1 | 479 | 566 | 40 | 126 | 4.98e-17 | 85.5 |
MsG0680032060.01.T01 | AT5G28300 | 36.789 | 299 | 139 | 9 | 281 | 569 | 300 | 558 | 2.61e-44 | 168 |
MsG0680032060.01.T01 | AT5G28300 | 39.815 | 108 | 54 | 3 | 48 | 144 | 452 | 559 | 2.29e-15 | 80.1 |
MsG0680032060.01.T01 | AT5G03680 | 34.202 | 307 | 142 | 7 | 55 | 356 | 119 | 370 | 6.62e-44 | 167 |
MsG0680032060.01.T01 | AT5G03680 | 44.211 | 95 | 51 | 2 | 480 | 573 | 119 | 212 | 4.68e-19 | 91.7 |
MsG0680032060.01.T01 | AT1G33240 | 59.649 | 114 | 35 | 1 | 54 | 167 | 61 | 163 | 3.61e-38 | 150 |
MsG0680032060.01.T01 | AT1G33240 | 59.649 | 114 | 35 | 1 | 54 | 167 | 61 | 163 | 7.25e-38 | 150 |
MsG0680032060.01.T01 | AT3G10000 | 57.143 | 105 | 43 | 2 | 38 | 140 | 71 | 175 | 1.76e-30 | 125 |
MsG0680032060.01.T01 | AT3G10000 | 44.086 | 93 | 51 | 1 | 476 | 567 | 84 | 176 | 1.59e-20 | 95.9 |
MsG0680032060.01.T01 | AT3G10000 | 53.846 | 104 | 38 | 2 | 38 | 140 | 71 | 165 | 1.08e-26 | 114 |
MsG0680032060.01.T01 | AT3G10000 | 41.304 | 92 | 45 | 1 | 476 | 567 | 84 | 166 | 2.45e-17 | 85.9 |
MsG0680032060.01.T01 | AT5G47660 | 51.685 | 89 | 41 | 1 | 480 | 568 | 303 | 389 | 8.13e-22 | 98.6 |
MsG0680032060.01.T01 | AT5G47660 | 47.059 | 85 | 40 | 3 | 55 | 137 | 303 | 384 | 4.46e-14 | 75.1 |
MsG0680032060.01.T01 | AT1G33240 | 38.655 | 119 | 71 | 2 | 55 | 171 | 396 | 514 | 3.22e-19 | 92.4 |
MsG0680032060.01.T01 | AT1G33240 | 54.430 | 79 | 25 | 1 | 89 | 167 | 57 | 124 | 2.07e-18 | 89.7 |
Find 235 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCAAAGATGCAAGTGTTAA+AGG | 0.186987 | 6:+32896025 | MsG0680032060.01.T01:CDS |
AAGAAATCCGTTGAAATATT+AGG | 0.189841 | 6:-32897582 | None:intergenic |
TTCAGGTTTGATGAAGAAAA+TGG | 0.194543 | 6:+32898391 | MsG0680032060.01.T01:CDS |
CCATTATGGGAGGAGATTTC+AGG | 0.224552 | 6:+32898374 | MsG0680032060.01.T01:CDS |
TTTACCACCTCTTCCTTCTT+TGG | 0.238671 | 6:-32897205 | None:intergenic |
CATGTTTAAGATGTTGTAAA+TGG | 0.243597 | 6:+32899210 | MsG0680032060.01.T01:three_prime_UTR |
ATGGACCTAAAGGGCCATTA+TGG | 0.251711 | 6:+32898360 | MsG0680032060.01.T01:CDS |
TCGGTGTCGGTGTTGGTGTT+GGG | 0.265380 | 6:-32898010 | None:intergenic |
GATATGAAGTACCAAGAAAA+TGG | 0.297874 | 6:+32898341 | MsG0680032060.01.T01:CDS |
GGACATGTCTTTGAATCTTC+TGG | 0.297895 | 6:-32898503 | None:intergenic |
TCCTCCCATAATGGCCCTTT+AGG | 0.309914 | 6:-32898365 | None:intergenic |
GTTGTTGTTGATGATGGTAT+TGG | 0.315589 | 6:-32897492 | None:intergenic |
CAACAGTCCATGCACTCTTT+TGG | 0.333863 | 6:-32898896 | None:intergenic |
AATATATACATAGGGGTAGA+AGG | 0.335502 | 6:+32898995 | MsG0680032060.01.T01:three_prime_UTR |
GGTGGTGGTGGATCAATTTC+AGG | 0.335799 | 6:+32895875 | MsG0680032060.01.T01:CDS |
GGAGTTGCACAAGAGGTTCT+TGG | 0.339414 | 6:+32897740 | MsG0680032060.01.T01:CDS |
GTCGGTGTCGGTGTTGGTGT+TGG | 0.352301 | 6:-32898011 | None:intergenic |
TACTTTGGCTAATAGGAAAA+TGG | 0.355696 | 6:+32897107 | MsG0680032060.01.T01:intron |
GTCACATCCGCCCCGGCTGC+TGG | 0.363646 | 6:-32898668 | None:intergenic |
GTTGAAGATAAGGTCTGATA+TGG | 0.365393 | 6:+32895994 | MsG0680032060.01.T01:CDS |
AGAAATCCGTTGAAATATTA+GGG | 0.373358 | 6:-32897581 | None:intergenic |
AGAGGGTTATTAGTATTTGT+AGG | 0.377717 | 6:-32897522 | None:intergenic |
TACTAAAGATGCTGCTGTTA+TGG | 0.378392 | 6:+32897881 | MsG0680032060.01.T01:CDS |
GCTAAATAAATAAGTTCATA+AGG | 0.379541 | 6:+32899105 | MsG0680032060.01.T01:three_prime_UTR |
AAAGCAACTGTTTCTTGTCT+TGG | 0.384139 | 6:-32895971 | None:intergenic |
TCAGGTTTGATGAAGAAAAT+GGG | 0.384923 | 6:+32898392 | MsG0680032060.01.T01:CDS |
AATAGGAAAATGGCAGATCT+TGG | 0.385060 | 6:+32897117 | MsG0680032060.01.T01:intron |
CAAGTGTTAAAGGTCCCTTA+TGG | 0.386222 | 6:+32896035 | MsG0680032060.01.T01:CDS |
ACTGGCAATGGTGCTGCTGC+TGG | 0.390612 | 6:-32898035 | None:intergenic |
GCAATGGCCTCCACAACAAC+AGG | 0.393419 | 6:+32898640 | MsG0680032060.01.T01:CDS |
TGAAGAAAATGGGGTACAAT+AGG | 0.394111 | 6:+32898402 | MsG0680032060.01.T01:CDS |
ACAGCAGCAAGTGACGAATA+TGG | 0.394354 | 6:+32898214 | MsG0680032060.01.T01:CDS |
TGCAAAGGATTAATAGAGAA+AGG | 0.396339 | 6:+32897826 | MsG0680032060.01.T01:CDS |
CAAAGAGGTGCAAAGAGAAA+TGG | 0.396790 | 6:+32898429 | MsG0680032060.01.T01:CDS |
ACATTGGTGGTAGGTGGTGG+TGG | 0.399332 | 6:+32898956 | MsG0680032060.01.T01:three_prime_UTR |
CCTGAAATCTCCTCCCATAA+TGG | 0.399545 | 6:-32898374 | None:intergenic |
AACGATGATGGCACCGTTGA+TGG | 0.403172 | 6:+32898604 | MsG0680032060.01.T01:CDS |
GTCGGTGTTGGTGTTGGGGT+TGG | 0.406448 | 6:-32898005 | None:intergenic |
AACAGGCGCCACCAGCAGCC+GGG | 0.409599 | 6:+32898657 | MsG0680032060.01.T01:CDS |
CCACCTACCACCAATGTTGC+CGG | 0.409689 | 6:-32898950 | None:intergenic |
CAGTTGCTTTGTTGAAGATA+AGG | 0.412788 | 6:+32895984 | MsG0680032060.01.T01:CDS |
GACTCAACAGTGTTGGGAAC+AGG | 0.413588 | 6:+32895812 | MsG0680032060.01.T01:CDS |
CCTTGAAACTTCATCCCATA+AGG | 0.419165 | 6:-32896050 | None:intergenic |
TGTGTTTGAGTTTGTGGTGG+TGG | 0.420050 | 6:-32897315 | None:intergenic |
GGAACAGGAGGAGGCAGCTC+AGG | 0.420665 | 6:+32895827 | MsG0680032060.01.T01:CDS |
GAGGGTGTGGATAGAAGTTT+TGG | 0.422223 | 6:+32895935 | MsG0680032060.01.T01:CDS |
AAGTTCGTCTTCGACTTCTT+CGG | 0.423944 | 6:+32897614 | MsG0680032060.01.T01:CDS |
GGTGTTTGTGTTTGAGTTTG+TGG | 0.424812 | 6:-32897321 | None:intergenic |
AGAAATGAAGCTGTTGTTGT+AGG | 0.430108 | 6:-32897363 | None:intergenic |
GTAATAGTAATTTGAGGAAG+AGG | 0.435660 | 6:-32897540 | None:intergenic |
TGTGTGTAAGACATTGGAAT+TGG | 0.436193 | 6:-32897447 | None:intergenic |
ACCAACTTGATGCTCTATAC+AGG | 0.438141 | 6:+32898534 | MsG0680032060.01.T01:CDS |
AGGGGTGGGAATAGTACTAA+TGG | 0.438142 | 6:-32897343 | None:intergenic |
ATGTTTAAGATGTTGTAAAT+GGG | 0.443404 | 6:+32899211 | MsG0680032060.01.T01:three_prime_UTR |
TGGACCTAAAGGGCCATTAT+GGG | 0.446325 | 6:+32898361 | MsG0680032060.01.T01:CDS |
AATGGGAGAAACCATTGATT+GGG | 0.446514 | 6:+32899228 | MsG0680032060.01.T01:three_prime_UTR |
GGTGGTGGTGGTGTTATTGA+AGG | 0.449272 | 6:-32897300 | None:intergenic |
GGTATTGCTGGTATTGGTAT+TGG | 0.450653 | 6:-32898074 | None:intergenic |
ACGGTGTTGTTGTTCAATAC+AGG | 0.451355 | 6:-32897945 | None:intergenic |
AAATGGGAGAAACCATTGAT+TGG | 0.451715 | 6:+32899227 | MsG0680032060.01.T01:three_prime_UTR |
AAGTGTTAAAGGTCCCTTAT+GGG | 0.453094 | 6:+32896036 | MsG0680032060.01.T01:CDS |
GACGGAAGAGGAAGAGGAAA+TGG | 0.453743 | 6:+32897670 | MsG0680032060.01.T01:CDS |
CAACAGGCGCCACCAGCAGC+CGG | 0.454870 | 6:+32898656 | MsG0680032060.01.T01:CDS |
CGAATCGACGGAAGAGGAAG+AGG | 0.460674 | 6:+32897664 | MsG0680032060.01.T01:CDS |
GGTGTAGGTATTGCTGGTAT+TGG | 0.461156 | 6:-32898080 | None:intergenic |
TTGAGGTGGCGGTGGTTTGT+TGG | 0.463608 | 6:-32898816 | None:intergenic |
AAAGAAATAACATATAATCT+TGG | 0.464341 | 6:-32899050 | None:intergenic |
GAAATGAAGCTGTTGTTGTA+GGG | 0.465028 | 6:-32897362 | None:intergenic |
AATGGTGCTGCTGCTGGTGT+CGG | 0.467443 | 6:-32898029 | None:intergenic |
GCTGCTGCTGGTGTCGGTGT+CGG | 0.467777 | 6:-32898023 | None:intergenic |
CCTTATGGGATGAAGTTTCA+AGG | 0.471695 | 6:+32896050 | MsG0680032060.01.T01:CDS |
GCATCAAGTTGGTGAAAGTA+AGG | 0.472098 | 6:-32898524 | None:intergenic |
CTAGGGGACTCAACAGTGTT+GGG | 0.473609 | 6:+32895806 | MsG0680032060.01.T01:CDS |
TGTGGAGGCCATTGCTGCTC+CGG | 0.474042 | 6:-32898632 | None:intergenic |
GGCAATGGTACTGCTGGTAC+TGG | 0.477694 | 6:-32898053 | None:intergenic |
GTTTGAGTTTGTGGTGGTGG+TGG | 0.478900 | 6:-32897312 | None:intergenic |
TGGAAGTAGTAGAAATGAAG+AGG | 0.480126 | 6:+32895916 | MsG0680032060.01.T01:CDS |
GCAAAGGATTAATAGAGAAA+GGG | 0.481748 | 6:+32897827 | MsG0680032060.01.T01:CDS |
TACCAAGAAAATGGACCTAA+AGG | 0.481995 | 6:+32898350 | MsG0680032060.01.T01:CDS |
GCTGGTGGCGCCTGTTGTTG+TGG | 0.482373 | 6:-32898650 | None:intergenic |
TTTCTTTGAGAGACTAATGA+AGG | 0.482390 | 6:+32897698 | MsG0680032060.01.T01:CDS |
CTTGAAACTTCATCCCATAA+GGG | 0.483873 | 6:-32896049 | None:intergenic |
TAGTAGAAATGAAGAGGGTG+TGG | 0.484511 | 6:+32895922 | MsG0680032060.01.T01:CDS |
AGCTGCTGCGTTGAGGCCTG+AGG | 0.484683 | 6:+32898580 | MsG0680032060.01.T01:CDS |
GAGGGTTATTAGTATTTGTA+GGG | 0.485687 | 6:-32897521 | None:intergenic |
TGGTGGAAAATGTGTAGGGT+TGG | 0.486037 | 6:-32897472 | None:intergenic |
AAATAAGTTCATAAGGGAGA+TGG | 0.486341 | 6:+32899112 | MsG0680032060.01.T01:three_prime_UTR |
CGGTGTCGGTGTTGGTGTTG+GGG | 0.486815 | 6:-32898009 | None:intergenic |
GGAAACGACAACAATGGAAG+GGG | 0.487557 | 6:+32897638 | MsG0680032060.01.T01:CDS |
ACAGTACATAACATTATTCG+AGG | 0.488009 | 6:-32899169 | None:intergenic |
AATAAGTTCATAAGGGAGAT+GGG | 0.488356 | 6:+32899113 | MsG0680032060.01.T01:three_prime_UTR |
ATAGGAAAATGGCAGATCTT+GGG | 0.492836 | 6:+32897118 | MsG0680032060.01.T01:intron |
ACCAAGAAAATGGACCTAAA+GGG | 0.493139 | 6:+32898351 | MsG0680032060.01.T01:CDS |
ACATCAGCAGCAGCAACAAC+AGG | 0.496241 | 6:+32898181 | MsG0680032060.01.T01:CDS |
GCAGCAGCAACAACAGGTTC+AGG | 0.497898 | 6:+32898187 | MsG0680032060.01.T01:CDS |
GCTGGTGTCGGTGTCGGTGT+TGG | 0.501369 | 6:-32898017 | None:intergenic |
GGCAGCTCAGGAGATGGAGC+AGG | 0.501746 | 6:+32895839 | MsG0680032060.01.T01:CDS |
GGGGATCGAATCGACGGAAG+AGG | 0.501747 | 6:+32897658 | MsG0680032060.01.T01:CDS |
GGAATTGGAAGTGTAGTTGA+TGG | 0.503022 | 6:-32897432 | None:intergenic |
TGTTGCGGTGTAGGTATTGC+TGG | 0.503047 | 6:-32898086 | None:intergenic |
TAAGATAAAGAAAATAATAG+AGG | 0.504671 | 6:+32899140 | MsG0680032060.01.T01:three_prime_UTR |
GCAACATTGGTGGTAGGTGG+TGG | 0.504677 | 6:+32898953 | MsG0680032060.01.T01:three_prime_UTR |
GGCACCGTTGATGGTTCAGC+CGG | 0.506059 | 6:+32898613 | MsG0680032060.01.T01:CDS |
TGTTGCTGCTGCTGATGTTG+TGG | 0.506243 | 6:-32898176 | None:intergenic |
GAAGGTGATTGATGCATTGA+AGG | 0.506401 | 6:-32897282 | None:intergenic |
TTCATTCCCTAATATTTCAA+CGG | 0.506565 | 6:+32897575 | MsG0680032060.01.T01:CDS |
AAAGAGGTGCAAAGAGAAAT+GGG | 0.507157 | 6:+32898430 | MsG0680032060.01.T01:CDS |
CTAAATAAATAAGTTCATAA+GGG | 0.509862 | 6:+32899106 | MsG0680032060.01.T01:three_prime_UTR |
GGCGCCACCAGCAGCCGGGG+CGG | 0.514500 | 6:+32898661 | MsG0680032060.01.T01:CDS |
GTTTGAACTTGTTGCGGTGT+AGG | 0.516119 | 6:-32898095 | None:intergenic |
CACTCCTATGCAGCTATGCT+AGG | 0.516756 | 6:+32895788 | MsG0680032060.01.T01:exon |
GGCAACGACACCGGCAACAT+TGG | 0.518399 | 6:+32898940 | MsG0680032060.01.T01:three_prime_UTR |
AACAGCACCGGTCATTCCTC+AGG | 0.519741 | 6:+32898142 | MsG0680032060.01.T01:CDS |
CACCGCCACCTCAATAAAAG+AGG | 0.524471 | 6:+32898825 | MsG0680032060.01.T01:exon |
GGTGCCATCATCGTTCCCTC+AGG | 0.524674 | 6:-32898596 | None:intergenic |
ACTCCTATGCAGCTATGCTA+GGG | 0.525198 | 6:+32895789 | MsG0680032060.01.T01:exon |
GAGGTGCTAGAGAAGAAGCT+TGG | 0.525337 | 6:+32897790 | MsG0680032060.01.T01:CDS |
GAGAAAAGAGAAAGAGAGAG+AGG | 0.527477 | 6:+32897771 | MsG0680032060.01.T01:CDS |
TGGTTCAGCCGGAGCAGCAA+TGG | 0.528420 | 6:+32898624 | MsG0680032060.01.T01:CDS |
GCTAGGGGACTCAACAGTGT+TGG | 0.529101 | 6:+32895805 | MsG0680032060.01.T01:CDS |
ACAGGCGCCACCAGCAGCCG+GGG | 0.531835 | 6:+32898658 | MsG0680032060.01.T01:CDS |
ACAGTGTTGGGAACAGGAGG+AGG | 0.532710 | 6:+32895818 | MsG0680032060.01.T01:CDS |
TTGAATGAGGCTCTAGGTGG+GGG | 0.533373 | 6:+32898873 | MsG0680032060.01.T01:three_prime_UTR |
GAGAGAAAGAGACATAGAGA+GGG | 0.533948 | 6:+32895751 | MsG0680032060.01.T01:five_prime_UTR |
TGATGCATGCAAGTTCATCT+AGG | 0.535689 | 6:+32898270 | MsG0680032060.01.T01:CDS |
AACAAGAGGAGTTGCACAAG+AGG | 0.535913 | 6:+32897733 | MsG0680032060.01.T01:CDS |
TGTTGTTGCACTGTTACAGT+TGG | 0.536680 | 6:-32898119 | None:intergenic |
GCTTACCATGATGGTGGTGG+TGG | 0.537546 | 6:+32895863 | MsG0680032060.01.T01:CDS |
CTCCATGGTCACATCCGCCC+CGG | 0.537791 | 6:-32898675 | None:intergenic |
AACGACACCGGCAACATTGG+TGG | 0.538181 | 6:+32898943 | MsG0680032060.01.T01:three_prime_UTR |
GGGGTGGGAATAGTACTAAT+GGG | 0.539998 | 6:-32897342 | None:intergenic |
TGCTCCGGCTGAACCATCAA+CGG | 0.540154 | 6:-32898617 | None:intergenic |
TAATAGTAATTTGAGGAAGA+GGG | 0.542471 | 6:-32897539 | None:intergenic |
ACATCCGCCCCGGCTGCTGG+TGG | 0.542795 | 6:-32898665 | None:intergenic |
GGTATTGGTGGAAAATGTGT+AGG | 0.543430 | 6:-32897477 | None:intergenic |
GGCGAAGCCTGAGGAATGAC+CGG | 0.543584 | 6:-32898149 | None:intergenic |
AGAGAGAAAGAGACATAGAG+AGG | 0.544623 | 6:+32895750 | MsG0680032060.01.T01:five_prime_UTR |
ATTAGGGAATGAAGATGGTG+GGG | 0.545044 | 6:-32897565 | None:intergenic |
GGAGGAGGCAGCTCAGGAGA+TGG | 0.546943 | 6:+32895833 | MsG0680032060.01.T01:CDS |
GGAGGTGTAGAGTTTAACAA+TGG | 0.547437 | 6:-32897396 | None:intergenic |
TGAAGGAAAGCAACAAGAAG+AGG | 0.547925 | 6:+32898480 | MsG0680032060.01.T01:CDS |
GGAAGAGGTGGTAAATCAGA+TGG | 0.550653 | 6:+32897213 | MsG0680032060.01.T01:CDS |
TTGGATTGTGTGTAAGACAT+TGG | 0.551286 | 6:-32897453 | None:intergenic |
TATTAGGGAATGAAGATGGT+GGG | 0.553150 | 6:-32897566 | None:intergenic |
GTGCTAGAGAAGAAGCTTGG+AGG | 0.555286 | 6:+32897793 | MsG0680032060.01.T01:CDS |
GAGGCCTGAGGGAACGATGA+TGG | 0.557139 | 6:+32898592 | MsG0680032060.01.T01:CDS |
TTGTTGTTGTTGAGGAATGA+CGG | 0.557825 | 6:-32897964 | None:intergenic |
GTTGTTGATGATGGTATTGG+TGG | 0.559014 | 6:-32897489 | None:intergenic |
CAATCATTGAATGAGGCTCT+AGG | 0.559014 | 6:+32898867 | MsG0680032060.01.T01:three_prime_UTR |
ATATATACATAGGGGTAGAA+GGG | 0.559541 | 6:+32898996 | MsG0680032060.01.T01:three_prime_UTR |
TGCTGCTGATGTTGTGGCAA+CGG | 0.560332 | 6:-32898170 | None:intergenic |
GTAAGCGGCGGCAACGACAC+CGG | 0.561717 | 6:+32898931 | MsG0680032060.01.T01:three_prime_UTR |
GAGGAAACGACAACAATGGA+AGG | 0.562272 | 6:+32897636 | MsG0680032060.01.T01:CDS |
TGCGGCGCTTGTTGTTGTTG+AGG | 0.562772 | 6:-32897972 | None:intergenic |
TCAACAACAACAAGCGCCGC+AGG | 0.568754 | 6:+32897974 | MsG0680032060.01.T01:CDS |
TGAAGCTGTTGTTGTAGGGG+TGG | 0.568902 | 6:-32897358 | None:intergenic |
TATCACAAGAGAACCAAAGA+AGG | 0.569305 | 6:+32897192 | MsG0680032060.01.T01:CDS |
GGAGGTTGCAAGAGATGCAA+AGG | 0.569352 | 6:+32897811 | MsG0680032060.01.T01:CDS |
GAAATATTAGGGAATGAAGA+TGG | 0.571067 | 6:-32897570 | None:intergenic |
TTTCAGGTGATGATGAAAGA+GGG | 0.571339 | 6:+32895891 | MsG0680032060.01.T01:CDS |
TTGATCCACCACCACCATCA+TGG | 0.573497 | 6:-32895868 | None:intergenic |
GCTGCTGCGTTGAGGCCTGA+GGG | 0.573525 | 6:+32898581 | MsG0680032060.01.T01:CDS |
AAGAGAACCAAAGAAGGAAG+AGG | 0.573797 | 6:+32897198 | MsG0680032060.01.T01:CDS |
TTCGTCTTCGACTTCTTCGG+AGG | 0.579514 | 6:+32897617 | MsG0680032060.01.T01:CDS |
CAGGCAGAAGAACAAGGTGG+AGG | 0.580136 | 6:+32898553 | MsG0680032060.01.T01:CDS |
CAGGTTTGATGAAGAAAATG+GGG | 0.580467 | 6:+32898393 | MsG0680032060.01.T01:CDS |
TTGTAATCAATCATTGAATG+AGG | 0.581195 | 6:+32898860 | MsG0680032060.01.T01:three_prime_UTR |
GCTGGTATTGGTATTGGCAA+TGG | 0.581527 | 6:-32898068 | None:intergenic |
GGTATTGGCAATGGTACTGC+TGG | 0.582926 | 6:-32898059 | None:intergenic |
GTTTGTGTTTGAGTTTGTGG+TGG | 0.587052 | 6:-32897318 | None:intergenic |
GGTACTGCTGGTACTGGCAA+TGG | 0.588980 | 6:-32898047 | None:intergenic |
CATTGAATGAGGCTCTAGGT+GGG | 0.589147 | 6:+32898871 | MsG0680032060.01.T01:three_prime_UTR |
GGAGCAGGAGCTTACCATGA+TGG | 0.589395 | 6:+32895854 | MsG0680032060.01.T01:CDS |
GTCCCCTAGCATAGCTGCAT+AGG | 0.589597 | 6:-32895792 | None:intergenic |
TGATCGGCCGCGTCGAGGTG+AGG | 0.591200 | 6:+32898718 | MsG0680032060.01.T01:CDS |
CTGAGAATGCTGAGAATGAT+CGG | 0.591465 | 6:+32898702 | MsG0680032060.01.T01:CDS |
ATTTCAGGTGATGATGAAAG+AGG | 0.592121 | 6:+32895890 | MsG0680032060.01.T01:CDS |
GGGAGAAACCATTGATTGGG+GGG | 0.594065 | 6:+32899231 | MsG0680032060.01.T01:three_prime_UTR |
AGAACCAAAGAAGGAAGAGG+TGG | 0.595193 | 6:+32897201 | MsG0680032060.01.T01:CDS |
ATTGAATGAGGCTCTAGGTG+GGG | 0.596893 | 6:+32898872 | MsG0680032060.01.T01:three_prime_UTR |
GATGACGAGGACGAAGATGA+AGG | 0.597081 | 6:+32898770 | MsG0680032060.01.T01:CDS |
ATGGGAGAAACCATTGATTG+GGG | 0.597325 | 6:+32899229 | MsG0680032060.01.T01:three_prime_UTR |
CATAGGGGTAGAAGGGTGTG+AGG | 0.598113 | 6:+32899003 | MsG0680032060.01.T01:three_prime_UTR |
AGCATTCTCAGCATCCTCCA+TGG | 0.598685 | 6:-32898690 | None:intergenic |
GAATATTATGACGATGATGA+CGG | 0.600596 | 6:+32898743 | MsG0680032060.01.T01:CDS |
GGAAGTAGTAGAAATGAAGA+GGG | 0.606377 | 6:+32895917 | MsG0680032060.01.T01:CDS |
TTCGGAGGAAACGACAACAA+TGG | 0.607000 | 6:+32897632 | MsG0680032060.01.T01:CDS |
GGAGGTTGTTGAGAAACAAG+AGG | 0.607799 | 6:+32897719 | MsG0680032060.01.T01:CDS |
CTTTGAGAGACTAATGAAGG+AGG | 0.607887 | 6:+32897701 | MsG0680032060.01.T01:CDS |
GCCTGTATAGAGCATCAAGT+TGG | 0.608740 | 6:-32898535 | None:intergenic |
GAAGAGGAAGAGGAAATGGA+AGG | 0.609651 | 6:+32897674 | MsG0680032060.01.T01:CDS |
CAAGTATTTCAAGAAAGTGA+AGG | 0.613019 | 6:+32898463 | MsG0680032060.01.T01:CDS |
GTTGATGGAACAGTGGTGGT+AGG | 0.616670 | 6:-32897417 | None:intergenic |
GTATTGGTGGAAAATGTGTA+GGG | 0.617041 | 6:-32897476 | None:intergenic |
AAGGTGATTGATGCATTGAA+GGG | 0.619014 | 6:-32897281 | None:intergenic |
TCAACAGTGTTGGGAACAGG+AGG | 0.620361 | 6:+32895815 | MsG0680032060.01.T01:CDS |
GATGGAACAGTGGTGGTAGG+AGG | 0.624878 | 6:-32897414 | None:intergenic |
GAAGCTGTTGTTGTAGGGGT+GGG | 0.625788 | 6:-32897357 | None:intergenic |
TTAGGGAATGAAGATGGTGG+GGG | 0.627070 | 6:-32897564 | None:intergenic |
TCTATACAGGCAGAAGAACA+AGG | 0.628687 | 6:+32898547 | MsG0680032060.01.T01:CDS |
GAGAATGATCGGCCGCGTCG+AGG | 0.629356 | 6:+32898713 | MsG0680032060.01.T01:CDS |
TGGGAGAAACCATTGATTGG+GGG | 0.629834 | 6:+32899230 | MsG0680032060.01.T01:three_prime_UTR |
ACCTAAAGGGCCATTATGGG+AGG | 0.631216 | 6:+32898364 | MsG0680032060.01.T01:CDS |
TGTGGCAACGGCGAAGCCTG+AGG | 0.633518 | 6:-32898158 | None:intergenic |
TTCAGGTGATGATGAAAGAG+GGG | 0.634874 | 6:+32895892 | MsG0680032060.01.T01:CDS |
TCATTGAATGAGGCTCTAGG+TGG | 0.636284 | 6:+32898870 | MsG0680032060.01.T01:three_prime_UTR |
AGCCGGGGCGGATGTGACCA+TGG | 0.639065 | 6:+32898673 | MsG0680032060.01.T01:CDS |
AGGGTGCAGCTGCTGCGTTG+AGG | 0.639190 | 6:+32898573 | MsG0680032060.01.T01:CDS |
GGTGTAGAGTTTAACAATGG+AGG | 0.640467 | 6:-32897393 | None:intergenic |
CTCCTATGCAGCTATGCTAG+GGG | 0.640615 | 6:+32895790 | MsG0680032060.01.T01:exon |
AGGAAACGACAACAATGGAA+GGG | 0.641866 | 6:+32897637 | MsG0680032060.01.T01:CDS |
CCGGCAACATTGGTGGTAGG+TGG | 0.643227 | 6:+32898950 | MsG0680032060.01.T01:three_prime_UTR |
AGGCAGAAGAACAAGGTGGA+GGG | 0.643787 | 6:+32898554 | MsG0680032060.01.T01:CDS |
GTTGGAGTTTGAACTTGTTG+CGG | 0.644658 | 6:-32898101 | None:intergenic |
GGAGCTTACCATGATGGTGG+TGG | 0.649488 | 6:+32895860 | MsG0680032060.01.T01:CDS |
GTGTTGTTGTTCAATACAGG+AGG | 0.651178 | 6:-32897942 | None:intergenic |
AGTGCAACAACAAACAGCAC+CGG | 0.652497 | 6:+32898130 | MsG0680032060.01.T01:CDS |
ACACCGGCAACATTGGTGGT+AGG | 0.652854 | 6:+32898947 | MsG0680032060.01.T01:three_prime_UTR |
GGGGTTGGTGTAGTTTCCTG+CGG | 0.653086 | 6:-32897990 | None:intergenic |
GGTGGCGCCTGTTGTTGTGG+AGG | 0.655534 | 6:-32898647 | None:intergenic |
ATATTAGGGAATGAAGATGG+TGG | 0.657400 | 6:-32897567 | None:intergenic |
TCAGGTGATGATGAAAGAGG+GGG | 0.658562 | 6:+32895893 | MsG0680032060.01.T01:CDS |
AAATGAAGCTGTTGTTGTAG+GGG | 0.668647 | 6:-32897361 | None:intergenic |
GAAACGACAACAATGGAAGG+GGG | 0.686144 | 6:+32897639 | MsG0680032060.01.T01:CDS |
TGCATGCAAGTTCATCTAGG+TGG | 0.686396 | 6:+32898273 | MsG0680032060.01.T01:CDS |
GCAGGAGCTTACCATGATGG+TGG | 0.707615 | 6:+32895857 | MsG0680032060.01.T01:CDS |
TATTCTTCCTCACCTCGACG+CGG | 0.712577 | 6:-32898725 | None:intergenic |
GTTGCGAAAAGTGACAACAA+TGG | 0.712598 | 6:+32898239 | MsG0680032060.01.T01:CDS |
AAGTGTAGTTGATGGAACAG+TGG | 0.713309 | 6:-32897424 | None:intergenic |
AGGTAGTGACAATTATGAAG+TGG | 0.722373 | 6:+32898790 | MsG0680032060.01.T01:CDS |
GGTACAATAGGAATGCAAAG+AGG | 0.724275 | 6:+32898414 | MsG0680032060.01.T01:CDS |
TGTAGTTGATGGAACAGTGG+TGG | 0.725823 | 6:-32897421 | None:intergenic |
CGGGGCGGATGTGACCATGG+AGG | 0.730577 | 6:+32898676 | MsG0680032060.01.T01:CDS |
ATACAGGCAGAAGAACAAGG+TGG | 0.746845 | 6:+32898550 | MsG0680032060.01.T01:CDS |
TGATGACGGTGATGATGACG+AGG | 0.768255 | 6:+32898757 | MsG0680032060.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATAATTAATAGTTTC+CGG | - | Chr6:32899083-32899102 | None:intergenic | 10.0% |
!! | AAAAGAAAAAATAAAATTTC+TGG | - | Chr6:32897062-32897081 | None:intergenic | 10.0% |
!! | TAAATTAAAAATATACATGA+GGG | - | Chr6:32896464-32896483 | None:intergenic | 10.0% |
!! | TTAAATTAAAAATATACATG+AGG | - | Chr6:32896465-32896484 | None:intergenic | 10.0% |
!!! | AAATTTTTGAATATATACAT+AGG | + | Chr6:32898986-32899005 | MsG0680032060.01.T01:three_prime_UTR | 10.0% |
!!! | AATTTTTGAATATATACATA+GGG | + | Chr6:32898987-32899006 | MsG0680032060.01.T01:three_prime_UTR | 10.0% |
!!! | ATTAATTTTGTCTTTATTTT+TGG | + | Chr6:32897083-32897102 | MsG0680032060.01.T01:intron | 10.0% |
!!! | TATTTTTTTTATCTTTGATT+TGG | + | Chr6:32896371-32896390 | MsG0680032060.01.T01:intron | 10.0% |
!!! | TTAATTTTGTCTTTATTTTT+GGG | + | Chr6:32897084-32897103 | MsG0680032060.01.T01:intron | 10.0% |
!!! | TTACATTTAACTTTATTTTT+TGG | + | Chr6:32899270-32899289 | MsG0680032060.01.T01:three_prime_UTR | 10.0% |
!! | AAAGAAATAACATATAATCT+TGG | - | Chr6:32899053-32899072 | None:intergenic | 15.0% |
!! | CTAAATAAATAAGTTCATAA+GGG | + | Chr6:32899106-32899125 | MsG0680032060.01.T01:three_prime_UTR | 15.0% |
!! | GTTGAAAAATAAAAATATGA+TGG | + | Chr6:32896708-32896727 | MsG0680032060.01.T01:intron | 15.0% |
!! | TAAGATAAAGAAAATAATAG+AGG | + | Chr6:32899140-32899159 | MsG0680032060.01.T01:three_prime_UTR | 15.0% |
!!! | ATTTTTGAATATATACATAG+GGG | + | Chr6:32898988-32899007 | MsG0680032060.01.T01:three_prime_UTR | 15.0% |
!!! | TATTTTTCAACACTAAAAAT+GGG | - | Chr6:32896699-32896718 | None:intergenic | 15.0% |
!!! | TTATTTTTCAACACTAAAAA+TGG | - | Chr6:32896700-32896719 | None:intergenic | 15.0% |
!! | AACTTAAGTGATTAAGATAA+GGG | - | Chr6:32896900-32896919 | None:intergenic | 20.0% |
!! | GCTAAATAAATAAGTTCATA+AGG | + | Chr6:32899105-32899124 | MsG0680032060.01.T01:three_prime_UTR | 20.0% |
!! | TAACTTAAGTGATTAAGATA+AGG | - | Chr6:32896901-32896920 | None:intergenic | 20.0% |
!! | TCTTATCTCATTAAATCTTT+AGG | - | Chr6:32897034-32897053 | None:intergenic | 20.0% |
!!! | AAACTTTTCTTTGCATTTTT+TGG | - | Chr6:32897157-32897176 | None:intergenic | 20.0% |
!!! | ATGTTTAAGATGTTGTAAAT+GGG | + | Chr6:32899211-32899230 | MsG0680032060.01.T01:three_prime_UTR | 20.0% |
!!! | ATTAAAAAGTTTGTTTCTCA+TGG | - | Chr6:32896776-32896795 | None:intergenic | 20.0% |
!!! | TATATCAAAGTTGATGTAAT+TGG | - | Chr6:32896855-32896874 | None:intergenic | 20.0% |
!!! | TGTTATTTCTTTTTCAAAAC+CGG | + | Chr6:32899061-32899080 | MsG0680032060.01.T01:three_prime_UTR | 20.0% |
!!! | TTCAAGTTTGTAACTTTATT+TGG | - | Chr6:32896629-32896648 | None:intergenic | 20.0% |
!!! | TTTTTTTTTCAGATTTCAGA+AGG | - | Chr6:32896160-32896179 | None:intergenic | 20.0% |
! | AAAAATGGGTAACTGAAATA+AGG | - | Chr6:32896685-32896704 | None:intergenic | 25.0% |
! | AAAATGGGTAACTGAAATAA+GGG | - | Chr6:32896684-32896703 | None:intergenic | 25.0% |
! | AAGAAATCCGTTGAAATATT+AGG | - | Chr6:32897585-32897604 | None:intergenic | 25.0% |
! | AGAAATCCGTTGAAATATTA+GGG | - | Chr6:32897584-32897603 | None:intergenic | 25.0% |
! | TAATAGTAATTTGAGGAAGA+GGG | - | Chr6:32897542-32897561 | None:intergenic | 25.0% |
! | TAGGATAAGAAGCAATTAAT+TGG | - | Chr6:32897015-32897034 | None:intergenic | 25.0% |
! | TCAATAATTCAGATTTCTCA+AGG | - | Chr6:32896312-32896331 | None:intergenic | 25.0% |
! | TTCATTCCCTAATATTTCAA+CGG | + | Chr6:32897575-32897594 | MsG0680032060.01.T01:CDS | 25.0% |
! | TTGTAATCAATCATTGAATG+AGG | + | Chr6:32898860-32898879 | MsG0680032060.01.T01:three_prime_UTR | 25.0% |
!! | CATGTTTAAGATGTTGTAAA+TGG | + | Chr6:32899210-32899229 | MsG0680032060.01.T01:three_prime_UTR | 25.0% |
!! | TATTTACTCCTCTTTTATTG+AGG | - | Chr6:32898836-32898855 | None:intergenic | 25.0% |
AAATAAGTTCATAAGGGAGA+TGG | + | Chr6:32899112-32899131 | MsG0680032060.01.T01:three_prime_UTR | 30.0% | |
AATAAGTTCATAAGGGAGAT+GGG | + | Chr6:32899113-32899132 | MsG0680032060.01.T01:three_prime_UTR | 30.0% | |
AATATATACATAGGGGTAGA+AGG | + | Chr6:32898995-32899014 | MsG0680032060.01.T01:three_prime_UTR | 30.0% | |
ACAGTACATAACATTATTCG+AGG | - | Chr6:32899172-32899191 | None:intergenic | 30.0% | |
AGACAACCAAAGAATTGAAA+TGG | - | Chr6:32896930-32896949 | None:intergenic | 30.0% | |
AGAGGGTTATTAGTATTTGT+AGG | - | Chr6:32897525-32897544 | None:intergenic | 30.0% | |
ATAATTCAGATTTCTCAAGG+TGG | - | Chr6:32896309-32896328 | None:intergenic | 30.0% | |
ATATATACATAGGGGTAGAA+GGG | + | Chr6:32898996-32899015 | MsG0680032060.01.T01:three_prime_UTR | 30.0% | |
CAAAATCTTTGTTCACACTT+TGG | + | Chr6:32896738-32896757 | MsG0680032060.01.T01:intron | 30.0% | |
CAAGTATTTCAAGAAAGTGA+AGG | + | Chr6:32898463-32898482 | MsG0680032060.01.T01:CDS | 30.0% | |
GAAATATTAGGGAATGAAGA+TGG | - | Chr6:32897573-32897592 | None:intergenic | 30.0% | |
GAATATTATGACGATGATGA+CGG | + | Chr6:32898743-32898762 | MsG0680032060.01.T01:CDS | 30.0% | |
GAGGGTTATTAGTATTTGTA+GGG | - | Chr6:32897524-32897543 | None:intergenic | 30.0% | |
GCAAAGGATTAATAGAGAAA+GGG | + | Chr6:32897827-32897846 | MsG0680032060.01.T01:CDS | 30.0% | |
GTAATAGTAATTTGAGGAAG+AGG | - | Chr6:32897543-32897562 | None:intergenic | 30.0% | |
TACTTTGGCTAATAGGAAAA+TGG | + | Chr6:32897107-32897126 | MsG0680032060.01.T01:intron | 30.0% | |
TCAGGTTTGATGAAGAAAAT+GGG | + | Chr6:32898392-32898411 | MsG0680032060.01.T01:CDS | 30.0% | |
TGCAAAGGATTAATAGAGAA+AGG | + | Chr6:32897826-32897845 | MsG0680032060.01.T01:CDS | 30.0% | |
TTCAAAGATGCAAGTGTTAA+AGG | + | Chr6:32896025-32896044 | MsG0680032060.01.T01:CDS | 30.0% | |
! | GATATGAAGTACCAAGAAAA+TGG | + | Chr6:32898341-32898360 | MsG0680032060.01.T01:CDS | 30.0% |
! | TTCAGGTTTGATGAAGAAAA+TGG | + | Chr6:32898391-32898410 | MsG0680032060.01.T01:CDS | 30.0% |
! | TTTCTTTGAGAGACTAATGA+AGG | + | Chr6:32897698-32897717 | MsG0680032060.01.T01:CDS | 30.0% |
!! | GGAAGAAAATCTTTGCTTTT+TGG | - | Chr6:32896660-32896679 | None:intergenic | 30.0% |
!! | TTTGTTGTTGTTGTTGATGA+TGG | - | Chr6:32897501-32897520 | None:intergenic | 30.0% |
!!! | GTCTTTATTTTTGGGTACTT+TGG | + | Chr6:32897092-32897111 | MsG0680032060.01.T01:intron | 30.0% |
!!! | TTTTTTCAGATTTCAGAAGG+TGG | - | Chr6:32896157-32896176 | None:intergenic | 30.0% |
AAATGAAGCTGTTGTTGTAG+GGG | - | Chr6:32897364-32897383 | None:intergenic | 35.0% | |
AAATGGGAGAAACCATTGAT+TGG | + | Chr6:32899227-32899246 | MsG0680032060.01.T01:three_prime_UTR | 35.0% | |
AAGGTGATTGATGCATTGAA+GGG | - | Chr6:32897284-32897303 | None:intergenic | 35.0% | |
AAGTGATTAAGATAAGGGAG+AGG | - | Chr6:32896895-32896914 | None:intergenic | 35.0% | |
AAGTGTTAAAGGTCCCTTAT+GGG | + | Chr6:32896036-32896055 | MsG0680032060.01.T01:CDS | 35.0% | |
AATAGGAAAATGGCAGATCT+TGG | + | Chr6:32897117-32897136 | MsG0680032060.01.T01:intron | 35.0% | |
ACCAAGAAAATGGACCTAAA+GGG | + | Chr6:32898351-32898370 | MsG0680032060.01.T01:CDS | 35.0% | |
AGAAATGAAGCTGTTGTTGT+AGG | - | Chr6:32897366-32897385 | None:intergenic | 35.0% | |
AGGTAGTGACAATTATGAAG+TGG | + | Chr6:32898790-32898809 | MsG0680032060.01.T01:CDS | 35.0% | |
ATAGGAAAATGGCAGATCTT+GGG | + | Chr6:32897118-32897137 | MsG0680032060.01.T01:intron | 35.0% | |
ATATTAGGGAATGAAGATGG+TGG | - | Chr6:32897570-32897589 | None:intergenic | 35.0% | |
CAGGTTTGATGAAGAAAATG+GGG | + | Chr6:32898393-32898412 | MsG0680032060.01.T01:CDS | 35.0% | |
CTTGAAACTTCATCCCATAA+GGG | - | Chr6:32896052-32896071 | None:intergenic | 35.0% | |
CTTGCTCCATTTCAATTCTT+TGG | + | Chr6:32896921-32896940 | MsG0680032060.01.T01:intron | 35.0% | |
GAAATGAAGCTGTTGTTGTA+GGG | - | Chr6:32897365-32897384 | None:intergenic | 35.0% | |
GGAAGTAGTAGAAATGAAGA+GGG | + | Chr6:32895917-32895936 | MsG0680032060.01.T01:CDS | 35.0% | |
GTTGAAGATAAGGTCTGATA+TGG | + | Chr6:32895994-32896013 | MsG0680032060.01.T01:CDS | 35.0% | |
TAAATAAACCCCCCAATCAA+TGG | - | Chr6:32899242-32899261 | None:intergenic | 35.0% | |
TACCAAGAAAATGGACCTAA+AGG | + | Chr6:32898350-32898369 | MsG0680032060.01.T01:CDS | 35.0% | |
TACTAAAGATGCTGCTGTTA+TGG | + | Chr6:32897881-32897900 | MsG0680032060.01.T01:CDS | 35.0% | |
TATCACAAGAGAACCAAAGA+AGG | + | Chr6:32897192-32897211 | MsG0680032060.01.T01:CDS | 35.0% | |
TATTAGGGAATGAAGATGGT+GGG | - | Chr6:32897569-32897588 | None:intergenic | 35.0% | |
TGAAGAAAATGGGGTACAAT+AGG | + | Chr6:32898402-32898421 | MsG0680032060.01.T01:CDS | 35.0% | |
TGGAAGTAGTAGAAATGAAG+AGG | + | Chr6:32895916-32895935 | MsG0680032060.01.T01:CDS | 35.0% | |
TGTGTGTAAGACATTGGAAT+TGG | - | Chr6:32897450-32897469 | None:intergenic | 35.0% | |
TTGGATTGTGTGTAAGACAT+TGG | - | Chr6:32897456-32897475 | None:intergenic | 35.0% | |
TTGTAAAAAGTGGCAGTAAG+CGG | + | Chr6:32898916-32898935 | MsG0680032060.01.T01:three_prime_UTR | 35.0% | |
! | AAAGAGGTGCAAAGAGAAAT+GGG | + | Chr6:32898430-32898449 | MsG0680032060.01.T01:CDS | 35.0% |
! | AAAGCAACTGTTTCTTGTCT+TGG | - | Chr6:32895974-32895993 | None:intergenic | 35.0% |
! | AATGGGAGAAACCATTGATT+GGG | + | Chr6:32899228-32899247 | MsG0680032060.01.T01:three_prime_UTR | 35.0% |
! | ATTTCAGGTGATGATGAAAG+AGG | + | Chr6:32895890-32895909 | MsG0680032060.01.T01:CDS | 35.0% |
! | CAGTTGCTTTGTTGAAGATA+AGG | + | Chr6:32895984-32896003 | MsG0680032060.01.T01:CDS | 35.0% |
! | GTATTGGTGGAAAATGTGTA+GGG | - | Chr6:32897479-32897498 | None:intergenic | 35.0% |
! | TTACTCCTCTTTTATTGAGG+TGG | - | Chr6:32898833-32898852 | None:intergenic | 35.0% |
! | TTGTTGTTGTTGAGGAATGA+CGG | - | Chr6:32897967-32897986 | None:intergenic | 35.0% |
! | TTTCAGGTGATGATGAAAGA+GGG | + | Chr6:32895891-32895910 | MsG0680032060.01.T01:CDS | 35.0% |
!! | CATTGAAGGGTTGTTTTCAA+GGG | - | Chr6:32897271-32897290 | None:intergenic | 35.0% |
!! | GAAGTTTTGGTGGTAATAGA+TGG | + | Chr6:32895948-32895967 | MsG0680032060.01.T01:CDS | 35.0% |
!! | GTTGTTGTTGATGATGGTAT+TGG | - | Chr6:32897495-32897514 | None:intergenic | 35.0% |
!! | TTTTGGGTACTTTGGCTAAT+AGG | + | Chr6:32897100-32897119 | MsG0680032060.01.T01:intron | 35.0% |
!!! | GTTCTGTGCTGTTTTTTGTA+AGG | + | Chr6:32895687-32895706 | MsG0680032060.01.T01:five_prime_UTR | 35.0% |
AAGAGAACCAAAGAAGGAAG+AGG | + | Chr6:32897198-32897217 | MsG0680032060.01.T01:CDS | 40.0% | |
AAGTTCGTCTTCGACTTCTT+CGG | + | Chr6:32897614-32897633 | MsG0680032060.01.T01:CDS | 40.0% | |
ACCAACTTGATGCTCTATAC+AGG | + | Chr6:32898534-32898553 | MsG0680032060.01.T01:CDS | 40.0% | |
AGAGAGAAAGAGACATAGAG+AGG | + | Chr6:32895750-32895769 | MsG0680032060.01.T01:five_prime_UTR | 40.0% | |
AGGAAACGACAACAATGGAA+GGG | + | Chr6:32897637-32897656 | MsG0680032060.01.T01:CDS | 40.0% | |
ATGGGTAACTGAAATAAGGG+AGG | - | Chr6:32896681-32896700 | None:intergenic | 40.0% | |
ATTAGGGAATGAAGATGGTG+GGG | - | Chr6:32897568-32897587 | None:intergenic | 40.0% | |
CAAGTGTTAAAGGTCCCTTA+TGG | + | Chr6:32896035-32896054 | MsG0680032060.01.T01:CDS | 40.0% | |
CAATCATTGAATGAGGCTCT+AGG | + | Chr6:32898867-32898886 | MsG0680032060.01.T01:three_prime_UTR | 40.0% | |
CCTTATGGGATGAAGTTTCA+AGG | + | Chr6:32896050-32896069 | MsG0680032060.01.T01:CDS | 40.0% | |
CCTTGAAACTTCATCCCATA+AGG | - | Chr6:32896053-32896072 | None:intergenic | 40.0% | |
CTGAGAATGCTGAGAATGAT+CGG | + | Chr6:32898702-32898721 | MsG0680032060.01.T01:CDS | 40.0% | |
GAAGGTGATTGATGCATTGA+AGG | - | Chr6:32897285-32897304 | None:intergenic | 40.0% | |
GAGAAAAGAGAAAGAGAGAG+AGG | + | Chr6:32897771-32897790 | MsG0680032060.01.T01:CDS | 40.0% | |
GAGAGAAAGAGACATAGAGA+GGG | + | Chr6:32895751-32895770 | MsG0680032060.01.T01:five_prime_UTR | 40.0% | |
GGACATGTCTTTGAATCTTC+TGG | - | Chr6:32898506-32898525 | None:intergenic | 40.0% | |
GGTACAATAGGAATGCAAAG+AGG | + | Chr6:32898414-32898433 | MsG0680032060.01.T01:CDS | 40.0% | |
GGTGTAGAGTTTAACAATGG+AGG | - | Chr6:32897396-32897415 | None:intergenic | 40.0% | |
GTTGCGAAAAGTGACAACAA+TGG | + | Chr6:32898239-32898258 | MsG0680032060.01.T01:CDS | 40.0% | |
TAGTAGAAATGAAGAGGGTG+TGG | + | Chr6:32895922-32895941 | MsG0680032060.01.T01:CDS | 40.0% | |
TCTATACAGGCAGAAGAACA+AGG | + | Chr6:32898547-32898566 | MsG0680032060.01.T01:CDS | 40.0% | |
TGAAGGAAAGCAACAAGAAG+AGG | + | Chr6:32898480-32898499 | MsG0680032060.01.T01:CDS | 40.0% | |
TGATGCATGCAAGTTCATCT+AGG | + | Chr6:32898270-32898289 | MsG0680032060.01.T01:CDS | 40.0% | |
TGTTGTTGCACTGTTACAGT+TGG | - | Chr6:32898122-32898141 | None:intergenic | 40.0% | |
TTTACCACCTCTTCCTTCTT+TGG | - | Chr6:32897208-32897227 | None:intergenic | 40.0% | |
! | AATGCCTCAACCTCAGTTTT+TGG | - | Chr6:32898299-32898318 | None:intergenic | 40.0% |
! | ATGGGAGAAACCATTGATTG+GGG | + | Chr6:32899229-32899248 | MsG0680032060.01.T01:three_prime_UTR | 40.0% |
! | CAAAGAGGTGCAAAGAGAAA+TGG | + | Chr6:32898429-32898448 | MsG0680032060.01.T01:CDS | 40.0% |
! | CTTTGAGAGACTAATGAAGG+AGG | + | Chr6:32897701-32897720 | MsG0680032060.01.T01:CDS | 40.0% |
! | GCATGGACTGTTGTAAAAAG+TGG | + | Chr6:32898906-32898925 | MsG0680032060.01.T01:three_prime_UTR | 40.0% |
! | GGAATTGGAAGTGTAGTTGA+TGG | - | Chr6:32897435-32897454 | None:intergenic | 40.0% |
! | GGAGGTGTAGAGTTTAACAA+TGG | - | Chr6:32897399-32897418 | None:intergenic | 40.0% |
! | GGGGGTGTAATAGTAATTTG+AGG | - | Chr6:32897549-32897568 | None:intergenic | 40.0% |
! | GGTGTTTGTGTTTGAGTTTG+TGG | - | Chr6:32897324-32897343 | None:intergenic | 40.0% |
! | GTGTTGTTGTTCAATACAGG+AGG | - | Chr6:32897945-32897964 | None:intergenic | 40.0% |
! | GTTTGTGTTTGAGTTTGTGG+TGG | - | Chr6:32897321-32897340 | None:intergenic | 40.0% |
! | TTCAGGTGATGATGAAAGAG+GGG | + | Chr6:32895892-32895911 | MsG0680032060.01.T01:CDS | 40.0% |
!! | AAGTGTAGTTGATGGAACAG+TGG | - | Chr6:32897427-32897446 | None:intergenic | 40.0% |
!! | ACGGTGTTGTTGTTCAATAC+AGG | - | Chr6:32897948-32897967 | None:intergenic | 40.0% |
!! | GCATCAAGTTGGTGAAAGTA+AGG | - | Chr6:32898527-32898546 | None:intergenic | 40.0% |
!! | GCATTGAAGGGTTGTTTTCA+AGG | - | Chr6:32897272-32897291 | None:intergenic | 40.0% |
!! | GGTATTGCTGGTATTGGTAT+TGG | - | Chr6:32898077-32898096 | None:intergenic | 40.0% |
!! | GGTATTGGTGGAAAATGTGT+AGG | - | Chr6:32897480-32897499 | None:intergenic | 40.0% |
!! | GTTGGAGTTTGAACTTGTTG+CGG | - | Chr6:32898104-32898123 | None:intergenic | 40.0% |
!! | GTTGTTGATGATGGTATTGG+TGG | - | Chr6:32897492-32897511 | None:intergenic | 40.0% |
AACAAGAGGAGTTGCACAAG+AGG | + | Chr6:32897733-32897752 | MsG0680032060.01.T01:CDS | 45.0% | |
ACAGCAGCAAGTGACGAATA+TGG | + | Chr6:32898214-32898233 | MsG0680032060.01.T01:CDS | 45.0% | |
ACTCCTATGCAGCTATGCTA+GGG | + | Chr6:32895789-32895808 | MsG0680032060.01.T01:exon | 45.0% | |
AGAACCAAAGAAGGAAGAGG+TGG | + | Chr6:32897201-32897220 | MsG0680032060.01.T01:CDS | 45.0% | |
AGGGGTGGGAATAGTACTAA+TGG | - | Chr6:32897346-32897365 | None:intergenic | 45.0% | |
AGTGCAACAACAAACAGCAC+CGG | + | Chr6:32898130-32898149 | MsG0680032060.01.T01:CDS | 45.0% | |
ATACAGGCAGAAGAACAAGG+TGG | + | Chr6:32898550-32898569 | MsG0680032060.01.T01:CDS | 45.0% | |
ATCTAGGTGGCCAAAAACTG+AGG | + | Chr6:32898286-32898305 | MsG0680032060.01.T01:CDS | 45.0% | |
ATGGACCTAAAGGGCCATTA+TGG | + | Chr6:32898360-32898379 | MsG0680032060.01.T01:CDS | 45.0% | |
CAGATTTCAGAAGGTGGCAT+TGG | - | Chr6:32896151-32896170 | None:intergenic | 45.0% | |
CCATTATGGGAGGAGATTTC+AGG | + | Chr6:32898374-32898393 | MsG0680032060.01.T01:CDS | 45.0% | |
CCTGAAATCTCCTCCCATAA+TGG | - | Chr6:32898377-32898396 | None:intergenic | 45.0% | |
GAAACGACAACAATGGAAGG+GGG | + | Chr6:32897639-32897658 | MsG0680032060.01.T01:CDS | 45.0% | |
GAAGAGGAAGAGGAAATGGA+AGG | + | Chr6:32897674-32897693 | MsG0680032060.01.T01:CDS | 45.0% | |
GAGGAAACGACAACAATGGA+AGG | + | Chr6:32897636-32897655 | MsG0680032060.01.T01:CDS | 45.0% | |
GGAAACGACAACAATGGAAG+GGG | + | Chr6:32897638-32897657 | MsG0680032060.01.T01:CDS | 45.0% | |
GGAAGAGGTGGTAAATCAGA+TGG | + | Chr6:32897213-32897232 | MsG0680032060.01.T01:CDS | 45.0% | |
GGAGGTTGTTGAGAAACAAG+AGG | + | Chr6:32897719-32897738 | MsG0680032060.01.T01:CDS | 45.0% | |
GGGGTGGGAATAGTACTAAT+GGG | - | Chr6:32897345-32897364 | None:intergenic | 45.0% | |
TAAAAAGTGGCAGTAAGCGG+CGG | + | Chr6:32898919-32898938 | MsG0680032060.01.T01:three_prime_UTR | 45.0% | |
TGCATGCAAGTTCATCTAGG+TGG | + | Chr6:32898273-32898292 | MsG0680032060.01.T01:CDS | 45.0% | |
TGGACCTAAAGGGCCATTAT+GGG | + | Chr6:32898361-32898380 | MsG0680032060.01.T01:CDS | 45.0% | |
TGGTGGAAAATGTGTAGGGT+TGG | - | Chr6:32897475-32897494 | None:intergenic | 45.0% | |
TTCGGAGGAAACGACAACAA+TGG | + | Chr6:32897632-32897651 | MsG0680032060.01.T01:CDS | 45.0% | |
! | CAACAGTCCATGCACTCTTT+TGG | - | Chr6:32898899-32898918 | None:intergenic | 45.0% |
! | CTCCTCTTTTATTGAGGTGG+CGG | - | Chr6:32898830-32898849 | None:intergenic | 45.0% |
! | GCCCTTTAGGTCCATTTTCT+TGG | - | Chr6:32898355-32898374 | None:intergenic | 45.0% |
! | GCCTGTATAGAGCATCAAGT+TGG | - | Chr6:32898538-32898557 | None:intergenic | 45.0% |
! | GGTGTAGGTATTGCTGGTAT+TGG | - | Chr6:32898083-32898102 | None:intergenic | 45.0% |
! | TCAGGTGATGATGAAAGAGG+GGG | + | Chr6:32895893-32895912 | MsG0680032060.01.T01:CDS | 45.0% |
! | TGGGAGAAACCATTGATTGG+GGG | + | Chr6:32899230-32899249 | MsG0680032060.01.T01:three_prime_UTR | 45.0% |
! | TGTGTTTGAGTTTGTGGTGG+TGG | - | Chr6:32897318-32897337 | None:intergenic | 45.0% |
! | TTAGGGAATGAAGATGGTGG+GGG | - | Chr6:32897567-32897586 | None:intergenic | 45.0% |
!! | ATTGAATGAGGCTCTAGGTG+GGG | + | Chr6:32898872-32898891 | MsG0680032060.01.T01:three_prime_UTR | 45.0% |
!! | CATTGAATGAGGCTCTAGGT+GGG | + | Chr6:32898871-32898890 | MsG0680032060.01.T01:three_prime_UTR | 45.0% |
!! | GAGGGTGTGGATAGAAGTTT+TGG | + | Chr6:32895935-32895954 | MsG0680032060.01.T01:CDS | 45.0% |
!! | GCTGGTATTGGTATTGGCAA+TGG | - | Chr6:32898071-32898090 | None:intergenic | 45.0% |
!! | GGTGTGGATAGAAGTTTTGG+TGG | + | Chr6:32895938-32895957 | MsG0680032060.01.T01:CDS | 45.0% |
!! | GTTTGAACTTGTTGCGGTGT+AGG | - | Chr6:32898098-32898117 | None:intergenic | 45.0% |
!! | TCATTGAATGAGGCTCTAGG+TGG | + | Chr6:32898870-32898889 | MsG0680032060.01.T01:three_prime_UTR | 45.0% |
!! | TGTAGTTGATGGAACAGTGG+TGG | - | Chr6:32897424-32897443 | None:intergenic | 45.0% |
!! | GAAAAATTAAATTAATAAAT+GGG | - | Chr6:32896254-32896273 | None:intergenic | 5.0% |
!! | TGAAAAATTAAATTAATAAA+TGG | - | Chr6:32896255-32896274 | None:intergenic | 5.0% |
ACATCAGCAGCAGCAACAAC+AGG | + | Chr6:32898181-32898200 | MsG0680032060.01.T01:CDS | 50.0% | |
ACCTAAAGGGCCATTATGGG+AGG | + | Chr6:32898364-32898383 | MsG0680032060.01.T01:CDS | 50.0% | |
AGCATTCTCAGCATCCTCCA+TGG | - | Chr6:32898693-32898712 | None:intergenic | 50.0% | |
AGGCAGAAGAACAAGGTGGA+GGG | + | Chr6:32898554-32898573 | MsG0680032060.01.T01:CDS | 50.0% | |
CACCGCCACCTCAATAAAAG+AGG | + | Chr6:32898825-32898844 | MsG0680032060.01.T01:exon | 50.0% | |
CACTCCTATGCAGCTATGCT+AGG | + | Chr6:32895788-32895807 | MsG0680032060.01.T01:exon | 50.0% | |
CTAGGGGACTCAACAGTGTT+GGG | + | Chr6:32895806-32895825 | MsG0680032060.01.T01:CDS | 50.0% | |
CTCCTATGCAGCTATGCTAG+GGG | + | Chr6:32895790-32895809 | MsG0680032060.01.T01:exon | 50.0% | |
GAAGCTGTTGTTGTAGGGGT+GGG | - | Chr6:32897360-32897379 | None:intergenic | 50.0% | |
GACGGAAGAGGAAGAGGAAA+TGG | + | Chr6:32897670-32897689 | MsG0680032060.01.T01:CDS | 50.0% | |
GATGACGAGGACGAAGATGA+AGG | + | Chr6:32898770-32898789 | MsG0680032060.01.T01:CDS | 50.0% | |
GGAGGTTGCAAGAGATGCAA+AGG | + | Chr6:32897811-32897830 | MsG0680032060.01.T01:CDS | 50.0% | |
GGAGTTGCACAAGAGGTTCT+TGG | + | Chr6:32897740-32897759 | MsG0680032060.01.T01:CDS | 50.0% | |
GTGCTAGAGAAGAAGCTTGG+AGG | + | Chr6:32897793-32897812 | MsG0680032060.01.T01:CDS | 50.0% | |
GTGGCCAAAAACTGAGGTTG+AGG | + | Chr6:32898292-32898311 | MsG0680032060.01.T01:CDS | 50.0% | |
TATTCTTCCTCACCTCGACG+CGG | - | Chr6:32898728-32898747 | None:intergenic | 50.0% | |
TCCTCCCATAATGGCCCTTT+AGG | - | Chr6:32898368-32898387 | None:intergenic | 50.0% | |
TGAAGCTGTTGTTGTAGGGG+TGG | - | Chr6:32897361-32897380 | None:intergenic | 50.0% | |
TGCTGCTGATGTTGTGGCAA+CGG | - | Chr6:32898173-32898192 | None:intergenic | 50.0% | |
TGTTGCTGCTGCTGATGTTG+TGG | - | Chr6:32898179-32898198 | None:intergenic | 50.0% | |
TTCGTCTTCGACTTCTTCGG+AGG | + | Chr6:32897617-32897636 | MsG0680032060.01.T01:CDS | 50.0% | |
TTGATCCACCACCACCATCA+TGG | - | Chr6:32895871-32895890 | None:intergenic | 50.0% | |
! | AACGATGATGGCACCGTTGA+TGG | + | Chr6:32898604-32898623 | MsG0680032060.01.T01:CDS | 50.0% |
! | GACTCAACAGTGTTGGGAAC+AGG | + | Chr6:32895812-32895831 | MsG0680032060.01.T01:CDS | 50.0% |
! | GAGGTGCTAGAGAAGAAGCT+TGG | + | Chr6:32897790-32897809 | MsG0680032060.01.T01:CDS | 50.0% |
! | GGGAGAAACCATTGATTGGG+GGG | + | Chr6:32899231-32899250 | MsG0680032060.01.T01:three_prime_UTR | 50.0% |
! | GTTGATGGAACAGTGGTGGT+AGG | - | Chr6:32897420-32897439 | None:intergenic | 50.0% |
! | TCAACAGTGTTGGGAACAGG+AGG | + | Chr6:32895815-32895834 | MsG0680032060.01.T01:CDS | 50.0% |
! | TGTTGCGGTGTAGGTATTGC+TGG | - | Chr6:32898089-32898108 | None:intergenic | 50.0% |
!! | CTCTTTTATTGAGGTGGCGG+TGG | - | Chr6:32898827-32898846 | None:intergenic | 50.0% |
!! | GGTATTGGCAATGGTACTGC+TGG | - | Chr6:32898062-32898081 | None:intergenic | 50.0% |
!! | GGTGGTGGTGGATCAATTTC+AGG | + | Chr6:32895875-32895894 | MsG0680032060.01.T01:CDS | 50.0% |
!! | GGTGGTGGTGGTGTTATTGA+AGG | - | Chr6:32897303-32897322 | None:intergenic | 50.0% |
!! | GTTTGAGTTTGTGGTGGTGG+TGG | - | Chr6:32897315-32897334 | None:intergenic | 50.0% |
!! | TGATGACGGTGATGATGACG+AGG | + | Chr6:32898757-32898776 | MsG0680032060.01.T01:CDS | 50.0% |
!! | TTGAATGAGGCTCTAGGTGG+GGG | + | Chr6:32898873-32898892 | MsG0680032060.01.T01:three_prime_UTR | 50.0% |
AACGACACCGGCAACATTGG+TGG | + | Chr6:32898943-32898962 | MsG0680032060.01.T01:three_prime_UTR | 55.0% | |
CAGGCAGAAGAACAAGGTGG+AGG | + | Chr6:32898553-32898572 | MsG0680032060.01.T01:CDS | 55.0% | |
CCACCTACCACCAATGTTGC+CGG | - | Chr6:32898953-32898972 | None:intergenic | 55.0% | |
CGAATCGACGGAAGAGGAAG+AGG | + | Chr6:32897664-32897683 | MsG0680032060.01.T01:CDS | 55.0% | |
GATGGAACAGTGGTGGTAGG+AGG | - | Chr6:32897417-32897436 | None:intergenic | 55.0% | |
GCAATGGCCTCCACAACAAC+AGG | + | Chr6:32898640-32898659 | MsG0680032060.01.T01:CDS | 55.0% | |
GCAGCAGCAACAACAGGTTC+AGG | + | Chr6:32898187-32898206 | MsG0680032060.01.T01:CDS | 55.0% | |
GCAGGAGCTTACCATGATGG+TGG | + | Chr6:32895857-32895876 | MsG0680032060.01.T01:CDS | 55.0% | |
GCTAGGGGACTCAACAGTGT+TGG | + | Chr6:32895805-32895824 | MsG0680032060.01.T01:CDS | 55.0% | |
GGAGCAGGAGCTTACCATGA+TGG | + | Chr6:32895854-32895873 | MsG0680032060.01.T01:CDS | 55.0% | |
GGCAATGGTACTGCTGGTAC+TGG | - | Chr6:32898056-32898075 | None:intergenic | 55.0% | |
GTCCCCTAGCATAGCTGCAT+AGG | - | Chr6:32895795-32895814 | None:intergenic | 55.0% | |
TGCTCCGGCTGAACCATCAA+CGG | - | Chr6:32898620-32898639 | None:intergenic | 55.0% | |
TGGAAGGGGGATCGAATCGA+CGG | + | Chr6:32897652-32897671 | MsG0680032060.01.T01:CDS | 55.0% | |
! | ACACCGGCAACATTGGTGGT+AGG | + | Chr6:32898947-32898966 | MsG0680032060.01.T01:three_prime_UTR | 55.0% |
! | ACAGTGTTGGGAACAGGAGG+AGG | + | Chr6:32895818-32895837 | MsG0680032060.01.T01:CDS | 55.0% |
! | ACATTGGTGGTAGGTGGTGG+TGG | + | Chr6:32898956-32898975 | MsG0680032060.01.T01:three_prime_UTR | 55.0% |
! | CATAGGGGTAGAAGGGTGTG+AGG | + | Chr6:32899003-32899022 | MsG0680032060.01.T01:three_prime_UTR | 55.0% |
! | GCAACATTGGTGGTAGGTGG+TGG | + | Chr6:32898953-32898972 | MsG0680032060.01.T01:three_prime_UTR | 55.0% |
! | GGTGATGATGAAAGAGGGGG+TGG | + | Chr6:32895896-32895915 | MsG0680032060.01.T01:CDS | 55.0% |
! | TCAACAACAACAAGCGCCGC+AGG | + | Chr6:32897974-32897993 | MsG0680032060.01.T01:CDS | 55.0% |
! | TTGAGGTGGCGGTGGTTTGT+TGG | - | Chr6:32898819-32898838 | None:intergenic | 55.0% |
!! | AACAGCACCGGTCATTCCTC+AGG | + | Chr6:32898142-32898161 | MsG0680032060.01.T01:CDS | 55.0% |
!! | AATGGTGCTGCTGCTGGTGT+CGG | - | Chr6:32898032-32898051 | None:intergenic | 55.0% |
!! | GCTTACCATGATGGTGGTGG+TGG | + | Chr6:32895863-32895882 | MsG0680032060.01.T01:CDS | 55.0% |
!! | GGAGCTTACCATGATGGTGG+TGG | + | Chr6:32895860-32895879 | MsG0680032060.01.T01:CDS | 55.0% |
!! | GGGGTTGGTGTAGTTTCCTG+CGG | - | Chr6:32897993-32898012 | None:intergenic | 55.0% |
!! | GGTACTGCTGGTACTGGCAA+TGG | - | Chr6:32898050-32898069 | None:intergenic | 55.0% |
!! | TCGGTGTCGGTGTTGGTGTT+GGG | - | Chr6:32898013-32898032 | None:intergenic | 55.0% |
!! | TGCGGCGCTTGTTGTTGTTG+AGG | - | Chr6:32897975-32897994 | None:intergenic | 55.0% |
GAGGCCTGAGGGAACGATGA+TGG | + | Chr6:32898592-32898611 | MsG0680032060.01.T01:CDS | 60.0% | |
GGCAACGACACCGGCAACAT+TGG | + | Chr6:32898940-32898959 | MsG0680032060.01.T01:three_prime_UTR | 60.0% | |
GGCGAAGCCTGAGGAATGAC+CGG | - | Chr6:32898152-32898171 | None:intergenic | 60.0% | |
GGGGATCGAATCGACGGAAG+AGG | + | Chr6:32897658-32897677 | MsG0680032060.01.T01:CDS | 60.0% | |
TGGTTCAGCCGGAGCAGCAA+TGG | + | Chr6:32898624-32898643 | MsG0680032060.01.T01:CDS | 60.0% | |
TGTGGAGGCCATTGCTGCTC+CGG | - | Chr6:32898635-32898654 | None:intergenic | 60.0% | |
! | CCGGCAACATTGGTGGTAGG+TGG | + | Chr6:32898950-32898969 | MsG0680032060.01.T01:three_prime_UTR | 60.0% |
! | GGTGCCATCATCGTTCCCTC+AGG | - | Chr6:32898599-32898618 | None:intergenic | 60.0% |
! | GTGGGGGCCAAAAGAGTGCA+TGG | + | Chr6:32898889-32898908 | MsG0680032060.01.T01:three_prime_UTR | 60.0% |
!! | ACTGGCAATGGTGCTGCTGC+TGG | - | Chr6:32898038-32898057 | None:intergenic | 60.0% |
!! | CGGTGTCGGTGTTGGTGTTG+GGG | - | Chr6:32898012-32898031 | None:intergenic | 60.0% |
!! | GGCACCGTTGATGGTTCAGC+CGG | + | Chr6:32898613-32898632 | MsG0680032060.01.T01:CDS | 60.0% |
!! | GTCGGTGTCGGTGTTGGTGT+TGG | - | Chr6:32898014-32898033 | None:intergenic | 60.0% |
!! | GTCGGTGTTGGTGTTGGGGT+TGG | - | Chr6:32898008-32898027 | None:intergenic | 60.0% |
AGCTGCTGCGTTGAGGCCTG+AGG | + | Chr6:32898580-32898599 | MsG0680032060.01.T01:CDS | 65.0% | |
AGGGTGCAGCTGCTGCGTTG+AGG | + | Chr6:32898573-32898592 | MsG0680032060.01.T01:CDS | 65.0% | |
CTCCATGGTCACATCCGCCC+CGG | - | Chr6:32898678-32898697 | None:intergenic | 65.0% | |
GAGAATGATCGGCCGCGTCG+AGG | + | Chr6:32898713-32898732 | MsG0680032060.01.T01:CDS | 65.0% | |
GCTGCTGCGTTGAGGCCTGA+GGG | + | Chr6:32898581-32898600 | MsG0680032060.01.T01:CDS | 65.0% | |
GGAACAGGAGGAGGCAGCTC+AGG | + | Chr6:32895827-32895846 | MsG0680032060.01.T01:CDS | 65.0% | |
GGAGGAGGCAGCTCAGGAGA+TGG | + | Chr6:32895833-32895852 | MsG0680032060.01.T01:CDS | 65.0% | |
GGCAGCTCAGGAGATGGAGC+AGG | + | Chr6:32895839-32895858 | MsG0680032060.01.T01:CDS | 65.0% | |
GGTGGCGCCTGTTGTTGTGG+AGG | - | Chr6:32898650-32898669 | None:intergenic | 65.0% | |
GTAAGCGGCGGCAACGACAC+CGG | + | Chr6:32898931-32898950 | MsG0680032060.01.T01:three_prime_UTR | 65.0% | |
TGTGGCAACGGCGAAGCCTG+AGG | - | Chr6:32898161-32898180 | None:intergenic | 65.0% | |
! | GCTGGTGGCGCCTGTTGTTG+TGG | - | Chr6:32898653-32898672 | None:intergenic | 65.0% |
!! | GCTGCTGCTGGTGTCGGTGT+CGG | - | Chr6:32898026-32898045 | None:intergenic | 65.0% |
!! | GCTGGTGTCGGTGTCGGTGT+TGG | - | Chr6:32898020-32898039 | None:intergenic | 65.0% |
AACAGGCGCCACCAGCAGCC+GGG | + | Chr6:32898657-32898676 | MsG0680032060.01.T01:CDS | 70.0% | |
AGCCGGGGCGGATGTGACCA+TGG | + | Chr6:32898673-32898692 | MsG0680032060.01.T01:CDS | 70.0% | |
CAACAGGCGCCACCAGCAGC+CGG | + | Chr6:32898656-32898675 | MsG0680032060.01.T01:CDS | 70.0% | |
CGGGGCGGATGTGACCATGG+AGG | + | Chr6:32898676-32898695 | MsG0680032060.01.T01:CDS | 70.0% | |
TGATCGGCCGCGTCGAGGTG+AGG | + | Chr6:32898718-32898737 | MsG0680032060.01.T01:CDS | 70.0% | |
ACAGGCGCCACCAGCAGCCG+GGG | + | Chr6:32898658-32898677 | MsG0680032060.01.T01:CDS | 75.0% | |
ACATCCGCCCCGGCTGCTGG+TGG | - | Chr6:32898668-32898687 | None:intergenic | 75.0% | |
GTCACATCCGCCCCGGCTGC+TGG | - | Chr6:32898671-32898690 | None:intergenic | 75.0% | |
! | GGCGCCACCAGCAGCCGGGG+CGG | + | Chr6:32898661-32898680 | MsG0680032060.01.T01:CDS | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr6 | gene | 32895683 | 32899355 | 32895683 | ID=MsG0680032060.01;Name=MsG0680032060.01 |
Chr6 | mRNA | 32895683 | 32899355 | 32895683 | ID=MsG0680032060.01.T01;Parent=MsG0680032060.01;Name=MsG0680032060.01.T01;_AED=0.47;_eAED=0.47;_QI=120|1|1|1|1|1|2|514|662 |
Chr6 | exon | 32895683 | 32896071 | 32895683 | ID=MsG0680032060.01.T01:exon:18197;Parent=MsG0680032060.01.T01 |
Chr6 | exon | 32897122 | 32899355 | 32897122 | ID=MsG0680032060.01.T01:exon:18198;Parent=MsG0680032060.01.T01 |
Chr6 | five_prime_UTR | 32895683 | 32895802 | 32895683 | ID=MsG0680032060.01.T01:five_prime_utr;Parent=MsG0680032060.01.T01 |
Chr6 | CDS | 32895803 | 32896071 | 32895803 | ID=MsG0680032060.01.T01:cds;Parent=MsG0680032060.01.T01 |
Chr6 | CDS | 32897122 | 32898841 | 32897122 | ID=MsG0680032060.01.T01:cds;Parent=MsG0680032060.01.T01 |
Chr6 | three_prime_UTR | 32898842 | 32899355 | 32898842 | ID=MsG0680032060.01.T01:three_prime_utr;Parent=MsG0680032060.01.T01 |
Gene Sequence |
Protein sequence |