Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018335.01.T01 | XP_003604371.1 | 96.809 | 282 | 7 | 1 | 1 | 282 | 1 | 280 | 0 | 559 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018335.01.T01 | Q9LVZ7 | 77.83 | 212 | 47 | 0 | 49 | 260 | 69 | 280 | 9.06E-122 | 353 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018335.01.T01 | G7JGX5 | 96.809 | 282 | 7 | 1 | 1 | 282 | 1 | 280 | 0.0 | 559 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048383.01 | MsG0480018335.01 | 0.807780 | 4.275455e-50 | 2.402669e-47 |
| MsG0080048687.01 | MsG0480018335.01 | 0.866510 | 2.704662e-65 | 9.138733e-62 |
| MsG0180000331.01 | MsG0480018335.01 | 0.820162 | 7.934108e-53 | 6.230342e-50 |
| MsG0180000339.01 | MsG0480018335.01 | 0.806379 | 8.466306e-50 | 4.588252e-47 |
| MsG0180001237.01 | MsG0480018335.01 | 0.810944 | 8.958805e-51 | 5.474235e-48 |
| MsG0180001260.01 | MsG0480018335.01 | 0.800544 | 1.371550e-48 | 6.403331e-46 |
| MsG0180003744.01 | MsG0480018335.01 | 0.802818 | 4.683294e-49 | 2.316576e-46 |
| MsG0180003793.01 | MsG0480018335.01 | 0.853190 | 2.814501e-61 | 6.030975e-58 |
| MsG0180003984.01 | MsG0480018335.01 | 0.834767 | 2.477820e-56 | 2.969227e-53 |
| MsG0180004009.01 | MsG0480018335.01 | 0.827059 | 1.928408e-54 | 1.841157e-51 |
| MsG0180004016.01 | MsG0480018335.01 | 0.802066 | 6.690908e-49 | 3.246622e-46 |
| MsG0180004130.01 | MsG0480018335.01 | 0.816060 | 6.717670e-52 | 4.711223e-49 |
| MsG0180004767.01 | MsG0480018335.01 | 0.815005 | 1.153901e-51 | 7.862082e-49 |
| MsG0180004854.01 | MsG0480018335.01 | 0.830925 | 2.230845e-55 | 2.384433e-52 |
| MsG0180004991.01 | MsG0480018335.01 | 0.842965 | 1.873697e-58 | 2.887832e-55 |
| MsG0180005049.01 | MsG0480018335.01 | 0.815250 | 1.017674e-51 | 6.979965e-49 |
| MsG0180005337.01 | MsG0480018335.01 | 0.802968 | 4.361024e-49 | 2.165223e-46 |
| MsG0280006305.01 | MsG0480018335.01 | 0.823587 | 1.278564e-53 | 1.105524e-50 |
| MsG0280010801.01 | MsG0480018335.01 | 0.838242 | 3.231170e-57 | 4.301441e-54 |
| MsG0380012073.01 | MsG0480018335.01 | 0.828265 | 9.894172e-55 | 9.784493e-52 |
| MsG0380013579.01 | MsG0480018335.01 | 0.824013 | 1.015921e-53 | 8.890041e-51 |
| MsG0380013641.01 | MsG0480018335.01 | 0.841030 | 6.083035e-58 | 8.824627e-55 |
| MsG0380016005.01 | MsG0480018335.01 | 0.801756 | 7.747907e-49 | 3.729825e-46 |
| MsG0380017476.01 | MsG0480018335.01 | 0.823105 | 1.656279e-53 | 1.412858e-50 |
| MsG0380017494.01 | MsG0480018335.01 | 0.823075 | 1.683389e-53 | 1.434788e-50 |
| MsG0380017556.01 | MsG0480018335.01 | 0.835952 | 1.243520e-56 | 1.544176e-53 |
| MsG0480018235.01 | MsG0480018335.01 | 0.822870 | 1.879480e-53 | 1.592592e-50 |
| MsG0480018335.01 | MsG0480018477.01 | 0.861113 | 1.288340e-63 | 3.604703e-60 |
| MsG0480018335.01 | MsG0480018894.01 | 0.811069 | 8.418586e-51 | 5.160682e-48 |
| MsG0480018335.01 | MsG0480019170.01 | 0.804511 | 2.085902e-49 | 1.077463e-46 |
| MsG0480018335.01 | MsG0480019642.01 | 0.802206 | 6.261406e-49 | 3.049000e-46 |
| MsG0480018335.01 | MsG0480021006.01 | 0.807931 | 3.970978e-50 | 2.240295e-47 |
| MsG0480018335.01 | MsG0480021077.01 | -0.808527 | 2.964130e-50 | 1.698798e-47 |
| MsG0480018335.01 | MsG0480021432.01 | 0.800006 | 1.764671e-48 | 8.127007e-46 |
| MsG0480018335.01 | MsG0480022960.01 | 0.804643 | 1.957524e-49 | 1.014650e-46 |
| MsG0480018335.01 | MsG0480023149.01 | 0.845319 | 4.375105e-59 | 7.263147e-56 |
| MsG0480018335.01 | MsG0480023240.01 | 0.863008 | 3.382693e-64 | 1.010301e-60 |
| MsG0480018335.01 | MsG0480023387.01 | 0.835393 | 1.722765e-56 | 2.103935e-53 |
| MsG0480018335.01 | MsG0480023447.01 | 0.811764 | 5.946539e-51 | 3.712736e-48 |
| MsG0480018335.01 | MsG0480023559.01 | 0.839521 | 1.507552e-57 | 2.087131e-54 |
| MsG0480018335.01 | MsG0580024191.01 | 0.817466 | 3.250644e-52 | 2.369199e-49 |
| MsG0480018335.01 | MsG0580024339.01 | 0.828811 | 7.305684e-55 | 7.340241e-52 |
| MsG0480018335.01 | MsG0580026157.01 | 0.800910 | 1.154590e-48 | 5.441107e-46 |
| MsG0480018335.01 | MsG0580026226.01 | 0.805840 | 1.099382e-49 | 5.876782e-47 |
| MsG0480018335.01 | MsG0580028597.01 | 0.802662 | 5.044743e-49 | 2.485195e-46 |
| MsG0480018335.01 | MsG0580029132.01 | 0.808608 | 2.848958e-50 | 1.636129e-47 |
| MsG0480018335.01 | MsG0580030100.01 | 0.803649 | 3.151282e-49 | 1.592175e-46 |
| MsG0480018335.01 | MsG0680030968.01 | 0.872834 | 2.345740e-67 | 9.958401e-64 |
| MsG0480018335.01 | MsG0680031628.01 | 0.808785 | 2.610616e-50 | 1.506226e-47 |
| MsG0480018335.01 | MsG0680031964.01 | 0.808490 | 3.018421e-50 | 1.728236e-47 |
| MsG0480018335.01 | MsG0680032060.01 | 0.804108 | 2.530685e-49 | 1.293805e-46 |
| MsG0480018335.01 | MsG0680034671.01 | 0.805901 | 1.067032e-49 | 5.712781e-47 |
| MsG0480018335.01 | MsG0680035306.01 | 0.822583 | 2.192147e-53 | 1.842574e-50 |
| MsG0480018335.01 | MsG0680035577.01 | 0.831240 | 1.867014e-55 | 2.014026e-52 |
| MsG0480018335.01 | MsG0680035601.01 | 0.802401 | 5.708673e-49 | 2.793869e-46 |
| MsG0480018335.01 | MsG0780036240.01 | 0.843303 | 1.522026e-58 | 2.371453e-55 |
| MsG0480018335.01 | MsG0780037240.01 | 0.827688 | 1.362708e-54 | 1.325074e-51 |
| MsG0480018335.01 | MsG0780038400.01 | 0.818486 | 1.911842e-52 | 1.433005e-49 |
| MsG0480018335.01 | MsG0780040338.01 | 0.807474 | 4.965591e-50 | 2.768425e-47 |
| MsG0480018335.01 | MsG0780040519.01 | 0.822270 | 2.590760e-53 | 2.158149e-50 |
| MsG0480018335.01 | MsG0780040569.01 | 0.831410 | 1.695615e-55 | 1.838411e-52 |
| MsG0480018335.01 | MsG0780040845.01 | 0.803947 | 2.733764e-49 | 1.391942e-46 |
| MsG0480018335.01 | MsG0780041223.01 | 0.837510 | 4.981928e-57 | 6.486220e-54 |
| MsG0480018335.01 | MsG0780041423.01 | 0.864470 | 1.188399e-64 | 3.735360e-61 |
| MsG0480018335.01 | MsG0880041949.01 | 0.811197 | 7.895666e-51 | 4.856448e-48 |
| MsG0480018335.01 | MsG0880042760.01 | 0.815954 | 7.093128e-52 | 4.959946e-49 |
| MsG0480018335.01 | MsG0880042991.01 | 0.827792 | 1.286233e-54 | 1.254487e-51 |
| MsG0480018335.01 | MsG0880043592.01 | 0.822941 | 1.809053e-53 | 1.535984e-50 |
| MsG0480018335.01 | MsG0880045145.01 | 0.812615 | 3.877811e-51 | 2.477136e-48 |
| MsG0480018335.01 | MsG0880045165.01 | 0.819259 | 1.275693e-52 | 9.767958e-50 |
| MsG0480018335.01 | MsG0880045631.01 | 0.804814 | 1.802820e-49 | 9.386697e-47 |
| MsG0480018335.01 | MsG0880045656.01 | 0.866085 | 3.689603e-65 | 1.228129e-61 |
| MsG0480018335.01 | MsG0880046068.01 | 0.816691 | 4.853226e-52 | 3.462637e-49 |
| MsG0480018335.01 | MsG0880046074.01 | 0.857831 | 1.248174e-62 | 3.121491e-59 |
| MsG0480018335.01 | MsG0880046177.01 | 0.838807 | 2.308872e-57 | 3.127429e-54 |
| MsG0480018335.01 | MsG0880046237.01 | 0.814249 | 1.696160e-51 | 1.132289e-48 |
| MsG0480018335.01 | MsG0880046933.01 | 0.816422 | 5.577056e-52 | 3.949898e-49 |
| MsG0480018335.01 | MsG0880047388.01 | 0.811614 | 6.410093e-51 | 3.986218e-48 |
| MsG0480018335.01 | MsG0880047428.01 | 0.826657 | 2.405343e-54 | 2.269907e-51 |
| MsG0480018335.01 | MsG0880047470.01 | 0.835465 | 1.652189e-56 | 2.021994e-53 |
| MsG0280006545.01 | MsG0480018335.01 | 0.811133 | 8.151945e-51 | 5.005796e-48 |
| MsG0280006993.01 | MsG0480018335.01 | 0.810075 | 1.380617e-50 | 8.243246e-48 |
| MsG0280008118.01 | MsG0480018335.01 | 0.852445 | 4.593838e-61 | 9.601160e-58 |
| MsG0280008134.01 | MsG0480018335.01 | 0.805015 | 1.637149e-49 | 8.567616e-47 |
| MsG0280008614.01 | MsG0480018335.01 | 0.804277 | 2.334051e-49 | 1.198445e-46 |
| MsG0280008885.01 | MsG0480018335.01 | 0.801259 | 9.797082e-49 | 4.657649e-46 |
| MsG0280008909.01 | MsG0480018335.01 | 0.800880 | 1.171120e-48 | 5.514771e-46 |
| MsG0280009141.01 | MsG0480018335.01 | 0.809085 | 2.252154e-50 | 1.309916e-47 |
| MsG0280010002.01 | MsG0480018335.01 | 0.810007 | 1.427584e-50 | 8.509045e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018335.01.T01 | MTR_4g010120 | 96.809 | 282 | 7 | 1 | 1 | 282 | 1 | 280 | 0.0 | 559 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018335.01.T01 | AT3G15820 | 77.830 | 212 | 47 | 0 | 49 | 260 | 69 | 280 | 9.24e-123 | 353 |
| MsG0480018335.01.T01 | AT3G15830 | 69.957 | 233 | 69 | 1 | 49 | 281 | 64 | 295 | 1.63e-117 | 339 |
Find 89 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAAACGAGTTATATATTA+TGG | 0.202134 | 4:+3497042 | MsG0480018335.01.T01:CDS |
| TTCTTCTCCACCCTTTGATT+TGG | 0.205170 | 4:+3496155 | MsG0480018335.01.T01:CDS |
| ACTAGTACTGTTCATTGTTT+TGG | 0.239105 | 4:-3495727 | None:intergenic |
| AAAGGGAAACACACAGAAAA+AGG | 0.257363 | 4:+3498204 | MsG0480018335.01.T01:three_prime_UTR |
| TCTTCTCCACCCTTTGATTT+GGG | 0.276299 | 4:+3496156 | MsG0480018335.01.T01:CDS |
| TGTGGAATACACGCTCTTTA+TGG | 0.285794 | 4:+3496125 | MsG0480018335.01.T01:CDS |
| TTCAAACTCCTCCTCATGTT+TGG | 0.314633 | 4:-3498369 | None:intergenic |
| GGAATGTAATGAAGGCATTA+GGG | 0.316804 | 4:-3495838 | None:intergenic |
| TGGAATGTAATGAAGGCATT+AGG | 0.332816 | 4:-3495839 | None:intergenic |
| TGCAACCAAATCATGTTTAG+AGG | 0.340593 | 4:-3498158 | None:intergenic |
| CTTCAGCTTCGTTCATGAAA+TGG | 0.346389 | 4:+3496022 | MsG0480018335.01.T01:CDS |
| AGGCCATTACACTATTGATT+TGG | 0.346538 | 4:+3498036 | MsG0480018335.01.T01:CDS |
| TACACTATTGATTTGGCTGT+TGG | 0.354110 | 4:+3498043 | MsG0480018335.01.T01:CDS |
| ATTGATTTGGCTGTTGGGTT+AGG | 0.379250 | 4:+3498049 | MsG0480018335.01.T01:CDS |
| CCATGCCTCTAAACATGATT+TGG | 0.379481 | 4:+3498153 | MsG0480018335.01.T01:CDS |
| CGAGTTATATATTATGGACT+TGG | 0.380434 | 4:+3497048 | MsG0480018335.01.T01:CDS |
| GAAGAAGAATTCTTCGGCAT+TGG | 0.403432 | 4:-3495973 | None:intergenic |
| TTGGCTGTTGGGTTAGGTGC+TGG | 0.405118 | 4:+3498055 | MsG0480018335.01.T01:CDS |
| TATATATTTGACTCTTTAGC+TGG | 0.413885 | 4:+3498079 | MsG0480018335.01.T01:CDS |
| AGAGGCGGCGCCGCCGTTCA+TGG | 0.424186 | 4:-3495875 | None:intergenic |
| ACATGAGGAGGATGAAGAGA+TGG | 0.426409 | 4:+3497951 | MsG0480018335.01.T01:CDS |
| TCACCTGAGGCAATGGTAGC+TGG | 0.428409 | 4:-3497148 | None:intergenic |
| ACACTATTGATTTGGCTGTT+GGG | 0.428713 | 4:+3498044 | MsG0480018335.01.T01:CDS |
| GGTGGCGTCACCGGAGGAAG+AGG | 0.434415 | 4:-3495893 | None:intergenic |
| CTGGTGTGGACTTTCCAGTT+GGG | 0.441942 | 4:+3497867 | MsG0480018335.01.T01:CDS |
| CGACAAAATCATCTCCCATC+TGG | 0.445790 | 4:-3498264 | None:intergenic |
| TGGTGGTGTGTCTGCGTTTG+AGG | 0.455031 | 4:-3495918 | None:intergenic |
| GGCGGCGCCGCCTCTTCCTC+CGG | 0.456995 | 4:+3495883 | MsG0480018335.01.T01:CDS |
| TACACGTGGCAACACATCAT+TGG | 0.460436 | 4:+3496061 | MsG0480018335.01.T01:CDS |
| ATAAGATTCTGGTGAAATTG+AGG | 0.460842 | 4:-3495807 | None:intergenic |
| GTTAGAGTGAAAAGTTTGAT+TGG | 0.463064 | 4:-3495941 | None:intergenic |
| TTTACATGTCGTGGGATTTG+TGG | 0.464311 | 4:+3497116 | MsG0480018335.01.T01:CDS |
| TTGCAAGCTGTGAGGTTACT+TGG | 0.466109 | 4:+3498007 | MsG0480018335.01.T01:CDS |
| TTTGAGGACGGTGGCGTCAC+CGG | 0.474389 | 4:-3495902 | None:intergenic |
| CATGAGGAGGATGAAGAGAT+GGG | 0.476682 | 4:+3497952 | MsG0480018335.01.T01:CDS |
| TCTGGTGTGGACTTTCCAGT+TGG | 0.481025 | 4:+3497866 | MsG0480018335.01.T01:CDS |
| TTATGGACTTGGTTAATTGA+AGG | 0.497483 | 4:+3497059 | MsG0480018335.01.T01:CDS |
| AATTTGAGACTGTACCCAAA+AGG | 0.497856 | 4:+3498186 | MsG0480018335.01.T01:three_prime_UTR |
| TGTTCTAGCTGCTCTTAATA+CGG | 0.502013 | 4:+3496236 | MsG0480018335.01.T01:CDS |
| GCGCCGCCGTTCATGGTGGT+TGG | 0.505272 | 4:-3495868 | None:intergenic |
| CACCCAGCTACCATTGCCTC+AGG | 0.509498 | 4:+3497145 | MsG0480018335.01.T01:CDS |
| TTACATGTCGTGGGATTTGT+GGG | 0.512699 | 4:+3497117 | MsG0480018335.01.T01:CDS |
| GAGGATGAAGAGATGGGAGA+TGG | 0.513956 | 4:+3497958 | MsG0480018335.01.T01:CDS |
| ATTTGAGACTGTACCCAAAA+GGG | 0.515747 | 4:+3498187 | MsG0480018335.01.T01:three_prime_UTR |
| GAATGAATCACCTGAGGCAA+TGG | 0.526312 | 4:-3497155 | None:intergenic |
| GAAAACAAAACCCAAATCAA+AGG | 0.528958 | 4:-3496166 | None:intergenic |
| CAGCCAAATCAATAGTGTAA+TGG | 0.530095 | 4:-3498039 | None:intergenic |
| AAAATTGGGAATACTGTGAC+TGG | 0.534304 | 4:-3495641 | None:intergenic |
| TGAAGAGATGGGAGATGGCA+TGG | 0.534871 | 4:+3497963 | MsG0480018335.01.T01:CDS |
| CACCTGAGGCAATGGTAGCT+GGG | 0.539500 | 4:-3497147 | None:intergenic |
| TTCATGGTGGTTGGAGAATG+TGG | 0.541925 | 4:-3495859 | None:intergenic |
| CCAAATCATGTTTAGAGGCA+TGG | 0.542552 | 4:-3498153 | None:intergenic |
| AAAACAAAACCCAAATCAAA+GGG | 0.542870 | 4:-3496165 | None:intergenic |
| TTGTTGTAGCTCTAAAGTGT+AGG | 0.545152 | 4:+3498298 | MsG0480018335.01.T01:three_prime_UTR |
| GAGAATGTGGAATGTAATGA+AGG | 0.552700 | 4:-3495846 | None:intergenic |
| AGAGTGAAAAGTTTGATTGG+TGG | 0.556131 | 4:-3495938 | None:intergenic |
| AGACCACAAGCAAACAAACA+CGG | 0.559564 | 4:-3496087 | None:intergenic |
| TCATGTTTGGATTCTAACAT+CGG | 0.577627 | 4:-3498356 | None:intergenic |
| CATTCTCCAACCACCATGAA+CGG | 0.579463 | 4:+3495862 | MsG0480018335.01.T01:exon |
| TGTATGTGTGGATGCCAGAT+GGG | 0.580083 | 4:+3498250 | MsG0480018335.01.T01:three_prime_UTR |
| GGCGTCACCGGAGGAAGAGG+CGG | 0.580308 | 4:-3495890 | None:intergenic |
| ATGCCGTGTTTGTTTGCTTG+TGG | 0.580559 | 4:+3496084 | MsG0480018335.01.T01:CDS |
| GAAATTGAGGTTGTAATTGA+CGG | 0.585623 | 4:-3495794 | None:intergenic |
| TCAAAGGGTGGAGAAGAAGA+AGG | 0.587930 | 4:-3496150 | None:intergenic |
| AAGACCTAGAGCAACAATCT+CGG | 0.589198 | 4:+3497082 | MsG0480018335.01.T01:CDS |
| GTGAAAAGTTTGATTGGTGG+TGG | 0.589354 | 4:-3495935 | None:intergenic |
| AGAGCCGAGATTGTTGCTCT+AGG | 0.591521 | 4:-3497086 | None:intergenic |
| GGTGTGTCTGCGTTTGAGGA+CGG | 0.597437 | 4:-3495914 | None:intergenic |
| GTGTATGTGTGGATGCCAGA+TGG | 0.600617 | 4:+3498249 | MsG0480018335.01.T01:three_prime_UTR |
| CAACATCATAGTAATAACTT+CGG | 0.602356 | 4:+3495766 | MsG0480018335.01.T01:five_prime_UTR |
| GTGAGGTTACTTGGTACAAG+AGG | 0.610779 | 4:+3498016 | MsG0480018335.01.T01:CDS |
| TTAGAGCTACAACAAAATCA+CGG | 0.613938 | 4:-3498290 | None:intergenic |
| AATGTAATGAAGGCATTAGG+GGG | 0.617798 | 4:-3495836 | None:intergenic |
| GAGGACGGTGGCGTCACCGG+AGG | 0.618518 | 4:-3495899 | None:intergenic |
| GTAGGCAATGTGTGTATGTG+TGG | 0.619686 | 4:+3498238 | MsG0480018335.01.T01:three_prime_UTR |
| GAATGTAATGAAGGCATTAG+GGG | 0.620843 | 4:-3495837 | None:intergenic |
| TGATAGCTTCATTAGACATG+AGG | 0.635623 | 4:+3497936 | MsG0480018335.01.T01:CDS |
| ATGTAATGAAGGCATTAGGG+GGG | 0.645122 | 4:-3495835 | None:intergenic |
| TAGCTTCATTAGACATGAGG+AGG | 0.645843 | 4:+3497939 | MsG0480018335.01.T01:CDS |
| GCTAGAACATTATTGAGCTG+AGG | 0.646448 | 4:-3496222 | None:intergenic |
| ACAAAACCCAAATCAAAGGG+TGG | 0.648382 | 4:-3496162 | None:intergenic |
| GATGTTAGAATCCAAACATG+AGG | 0.660469 | 4:+3498358 | MsG0480018335.01.T01:three_prime_UTR |
| GTTAGAATCCAAACATGAGG+AGG | 0.660606 | 4:+3498361 | MsG0480018335.01.T01:three_prime_UTR |
| GGCGGCGCCGCCGTTCATGG+TGG | 0.676201 | 4:-3495872 | None:intergenic |
| CTGAGGCAATGGTAGCTGGG+TGG | 0.676709 | 4:-3497144 | None:intergenic |
| TCTCCAACCACCATGAACGG+CGG | 0.680353 | 4:+3495865 | MsG0480018335.01.T01:exon |
| AATCTCAGATGTTGTACACG+TGG | 0.689946 | 4:+3496047 | MsG0480018335.01.T01:CDS |
| GTGTCTGCGTTTGAGGACGG+TGG | 0.706981 | 4:-3495911 | None:intergenic |
| TGAATGTATTGCAAGCTGTG+AGG | 0.765213 | 4:+3497999 | MsG0480018335.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTGATGTTTTTTTAA+TGG | + | Chr4:3496337-3496356 | MsG0480018335.01.T01:intron | 10.0% |
| !!! | TTTAGTATTTTTTTTTTGTT+TGG | + | Chr4:3496473-3496492 | MsG0480018335.01.T01:intron | 10.0% |
| !!! | TTTTTTGATGTTTTTTTAAT+GGG | + | Chr4:3496338-3496357 | MsG0480018335.01.T01:intron | 10.0% |
| !!! | AAAAAAAATTTGGTGTATTT+TGG | + | Chr4:3496644-3496663 | MsG0480018335.01.T01:intron | 15.0% |
| !!! | AAAATACACCAAATTTTTTT+TGG | - | Chr4:3496645-3496664 | None:intergenic | 15.0% |
| !!! | TTTATCTGAATTGATTTTTT+TGG | + | Chr4:3496938-3496957 | MsG0480018335.01.T01:intron | 15.0% |
| !!! | TTTTTGAATAATTCTTTTTG+TGG | - | Chr4:3495679-3495698 | None:intergenic | 15.0% |
| !!! | TTTTTTTTGTTTGTTTCTAA+TGG | + | Chr4:3496558-3496577 | MsG0480018335.01.T01:intron | 15.0% |
| !! | ATTTGAATTCAATTAACATC+TGG | + | Chr4:3497715-3497734 | MsG0480018335.01.T01:intron | 20.0% |
| !! | CAAAACAAAATAAAAACACA+AGG | - | Chr4:3497823-3497842 | None:intergenic | 20.0% |
| !! | CAAGTTAAAAATCACATTTA+GGG | - | Chr4:3497633-3497652 | None:intergenic | 20.0% |
| !! | TAGATACATTCATATAAAGT+GGG | - | Chr4:3496883-3496902 | None:intergenic | 20.0% |
| !! | TCAAGTTAAAAATCACATTT+AGG | - | Chr4:3497634-3497653 | None:intergenic | 20.0% |
| !! | TTAGATACATTCATATAAAG+TGG | - | Chr4:3496884-3496903 | None:intergenic | 20.0% |
| !! | TTTAACATGAAATTGAAGTT+TGG | + | Chr4:3497599-3497618 | MsG0480018335.01.T01:intron | 20.0% |
| !! | TTTCTCTTCCAAAAAAAATT+TGG | + | Chr4:3496634-3496653 | MsG0480018335.01.T01:intron | 20.0% |
| !! | TTTGAATTCAATTAACATCT+GGG | + | Chr4:3497716-3497735 | MsG0480018335.01.T01:intron | 20.0% |
| !!! | ATCATTTTTCCTGTTTTTTT+CGG | + | Chr4:3497895-3497914 | MsG0480018335.01.T01:CDS | 20.0% |
| !!! | ATCTCTGAATTGATTTTTTT+TGG | + | Chr4:3496583-3496602 | MsG0480018335.01.T01:intron | 20.0% |
| !!! | TGAATTCAAACATAGTTTTT+TGG | - | Chr4:3497413-3497432 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTGTTTGGCAATT+AGG | + | Chr4:3496481-3496500 | MsG0480018335.01.T01:intron | 20.0% |
| ! | AAAAAGGATAATAGAGAAGT+AGG | + | Chr4:3498220-3498239 | MsG0480018335.01.T01:three_prime_UTR | 25.0% |
| ! | AAAACAAAACCCAAATCAAA+GGG | - | Chr4:3496168-3496187 | None:intergenic | 25.0% |
| ! | ATAGCTAAAAATAGTGTCAA+TGG | + | Chr4:3498130-3498149 | MsG0480018335.01.T01:CDS | 25.0% |
| ! | ATCAATCAAACACATTACAT+CGG | - | Chr4:3496371-3496390 | None:intergenic | 25.0% |
| ! | CAACATCATAGTAATAACTT+CGG | + | Chr4:3495766-3495785 | MsG0480018335.01.T01:five_prime_UTR | 25.0% |
| ! | GATATTATTAGATGTTCTCA+AGG | + | Chr4:3496716-3496735 | MsG0480018335.01.T01:intron | 25.0% |
| ! | GGATAAAAGACAGAAAAATT+GGG | - | Chr4:3495658-3495677 | None:intergenic | 25.0% |
| ! | TATATATTTGACTCTTTAGC+TGG | + | Chr4:3498079-3498098 | MsG0480018335.01.T01:CDS | 25.0% |
| ! | TGCAAACGAGTTATATATTA+TGG | + | Chr4:3497042-3497061 | MsG0480018335.01.T01:CDS | 25.0% |
| ! | TGGATAAAAGACAGAAAAAT+TGG | - | Chr4:3495659-3495678 | None:intergenic | 25.0% |
| ! | TGTTTGATTGATATGCAAAT+GGG | + | Chr4:3496379-3496398 | MsG0480018335.01.T01:intron | 25.0% |
| ! | TTTAACATGAAGTTGAAGTT+TGG | + | Chr4:3497516-3497535 | MsG0480018335.01.T01:intron | 25.0% |
| !! | AATTTGTGTTTTCTTAGGTT+TGG | + | Chr4:3496447-3496466 | MsG0480018335.01.T01:intron | 25.0% |
| !! | GCATTTTCTGAGTTAAAATT+TGG | + | Chr4:3496605-3496624 | MsG0480018335.01.T01:intron | 25.0% |
| !! | GTCAAAATTTGTGTTTTCTT+AGG | + | Chr4:3496442-3496461 | MsG0480018335.01.T01:intron | 25.0% |
| !!! | AAACATGCATTTAGTTCTAT+TGG | - | Chr4:3497343-3497362 | None:intergenic | 25.0% |
| !!! | AAACTCTAAATTCTAGCTTT+AGG | - | Chr4:3496774-3496793 | None:intergenic | 25.0% |
| !!! | ACGATAATATGTGTTTTGTT+TGG | + | Chr4:3496904-3496923 | MsG0480018335.01.T01:intron | 25.0% |
| !!! | ATTTTGTTTTGATGTTGAAC+AGG | + | Chr4:3497832-3497851 | MsG0480018335.01.T01:intron | 25.0% |
| !!! | GGAAAATTGATTTTGTTTCT+TGG | + | Chr4:3496737-3496756 | MsG0480018335.01.T01:intron | 25.0% |
| !!! | TAAATAGTCTCTGAAATTAG+TGG | - | Chr4:3497685-3497704 | None:intergenic | 25.0% |
| !!! | TAACAATGAAGCATTTTGTT+TGG | - | Chr4:3497210-3497229 | None:intergenic | 25.0% |
| !!! | TCAAACATAGTTTTTTGGAT+TGG | - | Chr4:3497408-3497427 | None:intergenic | 25.0% |
| !!! | TCATTTTTCCTGTTTTTTTC+GGG | + | Chr4:3497896-3497915 | MsG0480018335.01.T01:CDS | 25.0% |
| !!! | TTTTGTTTTGATGTTGAACA+GGG | + | Chr4:3497833-3497852 | MsG0480018335.01.T01:intron | 25.0% |
| AAAAATGATACATTCCCAAC+TGG | - | Chr4:3497884-3497903 | None:intergenic | 30.0% | |
| ACTAGAAGCTTACAATGAAA+GGG | + | Chr4:3497462-3497481 | MsG0480018335.01.T01:intron | 30.0% | |
| ATAAGATTCTGGTGAAATTG+AGG | - | Chr4:3495810-3495829 | None:intergenic | 30.0% | |
| CATTGTAAGCTTCTAGTAAT+GGG | - | Chr4:3497459-3497478 | None:intergenic | 30.0% | |
| CGAGTTATATATTATGGACT+TGG | + | Chr4:3497048-3497067 | MsG0480018335.01.T01:CDS | 30.0% | |
| GAAAACAAAACCCAAATCAA+AGG | - | Chr4:3496169-3496188 | None:intergenic | 30.0% | |
| GAAATTGAGGTTGTAATTGA+CGG | - | Chr4:3495797-3495816 | None:intergenic | 30.0% | |
| GAAGAAGAAGAAGAATTCTT+CGG | - | Chr4:3495982-3496001 | None:intergenic | 30.0% | |
| GTGTTTGATTGATATGCAAA+TGG | + | Chr4:3496378-3496397 | MsG0480018335.01.T01:intron | 30.0% | |
| GTTAGAGTGAAAAGTTTGAT+TGG | - | Chr4:3495944-3495963 | None:intergenic | 30.0% | |
| TACTAGAAGCTTACAATGAA+AGG | + | Chr4:3497461-3497480 | MsG0480018335.01.T01:intron | 30.0% | |
| TCATGTTTGGATTCTAACAT+CGG | - | Chr4:3498359-3498378 | None:intergenic | 30.0% | |
| TCATTGTAAGCTTCTAGTAA+TGG | - | Chr4:3497460-3497479 | None:intergenic | 30.0% | |
| TGTTTGCATGACATGAAAAT+GGG | + | Chr4:3496514-3496533 | MsG0480018335.01.T01:intron | 30.0% | |
| TTACAATTGCAAGATCAGAT+TGG | + | Chr4:3497755-3497774 | MsG0480018335.01.T01:intron | 30.0% | |
| TTAGAGCTACAACAAAATCA+CGG | - | Chr4:3498293-3498312 | None:intergenic | 30.0% | |
| TTTGTTTGGCAATTAGGAAA+TGG | + | Chr4:3496487-3496506 | MsG0480018335.01.T01:intron | 30.0% | |
| ! | ACTAGTACTGTTCATTGTTT+TGG | - | Chr4:3495730-3495749 | None:intergenic | 30.0% |
| ! | ATGAAGTTGAAGTTTGGAAT+TGG | + | Chr4:3497563-3497582 | MsG0480018335.01.T01:intron | 30.0% |
| ! | TTATGGACTTGGTTAATTGA+AGG | + | Chr4:3497059-3497078 | MsG0480018335.01.T01:CDS | 30.0% |
| ! | TTTTCATGTTTACATGTCGT+GGG | + | Chr4:3497108-3497127 | MsG0480018335.01.T01:CDS | 30.0% |
| !! | AATTTAGAGTTTTTGCCTCT+GGG | + | Chr4:3496782-3496801 | MsG0480018335.01.T01:intron | 30.0% |
| !! | TGCATTTAGTTCTATTGGAT+TGG | - | Chr4:3497338-3497357 | None:intergenic | 30.0% |
| !! | TGTAGGTTTTGTCAAAATTG+CGG | + | Chr4:3498315-3498334 | MsG0480018335.01.T01:three_prime_UTR | 30.0% |
| !!! | ACATAGTTTTTTGGATTGGT+CGG | - | Chr4:3497404-3497423 | None:intergenic | 30.0% |
| !!! | ACTGTTCATTGTTTTGGAAA+AGG | - | Chr4:3495724-3495743 | None:intergenic | 30.0% |
| !!! | CTGTTCATTGTTTTGGAAAA+GGG | - | Chr4:3495723-3495742 | None:intergenic | 30.0% |
| !!! | GTTTTGTTTGCATTGTTAGT+TGG | + | Chr4:3496980-3496999 | MsG0480018335.01.T01:intron | 30.0% |
| !!! | TTTTCAACTTGCTATCTTCA+AGG | - | Chr4:3498111-3498130 | None:intergenic | 30.0% |
| AAAATTGGGAATACTGTGAC+TGG | - | Chr4:3495644-3495663 | None:intergenic | 35.0% | |
| AAAGGGAAACACACAGAAAA+AGG | + | Chr4:3498204-3498223 | MsG0480018335.01.T01:three_prime_UTR | 35.0% | |
| AGAGTGAAAAGTTTGATTGG+TGG | - | Chr4:3495941-3495960 | None:intergenic | 35.0% | |
| CAGCCAAATCAATAGTGTAA+TGG | - | Chr4:3498042-3498061 | None:intergenic | 35.0% | |
| CATGTTATAATCAATCCCAG+AGG | - | Chr4:3496800-3496819 | None:intergenic | 35.0% | |
| GAGAATGTGGAATGTAATGA+AGG | - | Chr4:3495849-3495868 | None:intergenic | 35.0% | |
| GATGTTAGAATCCAAACATG+AGG | + | Chr4:3498358-3498377 | MsG0480018335.01.T01:three_prime_UTR | 35.0% | |
| GTGTTTGCATGACATGAAAA+TGG | + | Chr4:3496513-3496532 | MsG0480018335.01.T01:intron | 35.0% | |
| TGAAATGAATGAATCACCTG+AGG | - | Chr4:3497164-3497183 | None:intergenic | 35.0% | |
| TGATAGCTTCATTAGACATG+AGG | + | Chr4:3497936-3497955 | MsG0480018335.01.T01:CDS | 35.0% | |
| TGCAACCAAATCATGTTTAG+AGG | - | Chr4:3498161-3498180 | None:intergenic | 35.0% | |
| TTAACCTCCAAAATGCTCTT+AGG | - | Chr4:3497310-3497329 | None:intergenic | 35.0% | |
| ! | AAAATCTGTGTTTTGCGTGT+AGG | + | Chr4:3497007-3497026 | MsG0480018335.01.T01:intron | 35.0% |
| ! | AATTTGAGACTGTACCCAAA+AGG | + | Chr4:3498186-3498205 | MsG0480018335.01.T01:three_prime_UTR | 35.0% |
| ! | AGGCCATTACACTATTGATT+TGG | + | Chr4:3498036-3498055 | MsG0480018335.01.T01:CDS | 35.0% |
| ! | ATCTCGTTTATCTCTCGTTT+TGG | + | Chr4:3496260-3496279 | MsG0480018335.01.T01:intron | 35.0% |
| ! | ATTTGAGACTGTACCCAAAA+GGG | + | Chr4:3498187-3498206 | MsG0480018335.01.T01:three_prime_UTR | 35.0% |
| ! | CTTTTCATGTTTACATGTCG+TGG | + | Chr4:3497107-3497126 | MsG0480018335.01.T01:CDS | 35.0% |
| ! | GATGTTGAACAGGGATTTTT+GGG | + | Chr4:3497842-3497861 | MsG0480018335.01.T01:intron | 35.0% |
| ! | TGATGTTGAACAGGGATTTT+TGG | + | Chr4:3497841-3497860 | MsG0480018335.01.T01:intron | 35.0% |
| ! | TGTTCTAGCTGCTCTTAATA+CGG | + | Chr4:3496236-3496255 | MsG0480018335.01.T01:CDS | 35.0% |
| ! | TTGTGGTCTTTTGTTCTTCA+TGG | + | Chr4:3496101-3496120 | MsG0480018335.01.T01:CDS | 35.0% |
| ! | TTTCTGTGTGTTTCCCTTTT+GGG | - | Chr4:3498203-3498222 | None:intergenic | 35.0% |
| ! | TTTTCTGTGTGTTTCCCTTT+TGG | - | Chr4:3498204-3498223 | None:intergenic | 35.0% |
| !! | AATGTAATGAAGGCATTAGG+GGG | - | Chr4:3495839-3495858 | None:intergenic | 35.0% |
| !! | ACACTATTGATTTGGCTGTT+GGG | + | Chr4:3498044-3498063 | MsG0480018335.01.T01:CDS | 35.0% |
| !! | AGTGGGTTGAACAATACTAA+AGG | - | Chr4:3496866-3496885 | None:intergenic | 35.0% |
| !! | GAATGTAATGAAGGCATTAG+GGG | - | Chr4:3495840-3495859 | None:intergenic | 35.0% |
| !! | GAATTTAGAGTTTTTGCCTC+TGG | + | Chr4:3496781-3496800 | MsG0480018335.01.T01:intron | 35.0% |
| !! | GGAATGTAATGAAGGCATTA+GGG | - | Chr4:3495841-3495860 | None:intergenic | 35.0% |
| !! | TACACTATTGATTTGGCTGT+TGG | + | Chr4:3498043-3498062 | MsG0480018335.01.T01:CDS | 35.0% |
| !! | TGGAATGTAATGAAGGCATT+AGG | - | Chr4:3495842-3495861 | None:intergenic | 35.0% |
| !! | TTGTTGTAGCTCTAAAGTGT+AGG | + | Chr4:3498298-3498317 | MsG0480018335.01.T01:three_prime_UTR | 35.0% |
| !!! | CATTAGTCCTAAGAGCATTT+TGG | + | Chr4:3497300-3497319 | MsG0480018335.01.T01:intron | 35.0% |
| !!! | CATTGTTTTGGAAAAGGGTA+AGG | - | Chr4:3495718-3495737 | None:intergenic | 35.0% |
| !!! | TCTTCGGCATTGGATTTTTT+TGG | - | Chr4:3495966-3495985 | None:intergenic | 35.0% |
| AAGACCTAGAGCAACAATCT+CGG | + | Chr4:3497082-3497101 | MsG0480018335.01.T01:CDS | 40.0% | |
| AATCTCAGATGTTGTACACG+TGG | + | Chr4:3496047-3496066 | MsG0480018335.01.T01:CDS | 40.0% | |
| ACAAAACCCAAATCAAAGGG+TGG | - | Chr4:3496165-3496184 | None:intergenic | 40.0% | |
| AGACCACAAGCAAACAAACA+CGG | - | Chr4:3496090-3496109 | None:intergenic | 40.0% | |
| CCAAATCATGTTTAGAGGCA+TGG | - | Chr4:3498156-3498175 | None:intergenic | 40.0% | |
| CCATGCCTCTAAACATGATT+TGG | + | Chr4:3498153-3498172 | MsG0480018335.01.T01:CDS | 40.0% | |
| CTTCAGCTTCGTTCATGAAA+TGG | + | Chr4:3496022-3496041 | MsG0480018335.01.T01:CDS | 40.0% | |
| GAAGAAGAATTCTTCGGCAT+TGG | - | Chr4:3495976-3495995 | None:intergenic | 40.0% | |
| GCTAGAACATTATTGAGCTG+AGG | - | Chr4:3496225-3496244 | None:intergenic | 40.0% | |
| GTGAAAAGTTTGATTGGTGG+TGG | - | Chr4:3495938-3495957 | None:intergenic | 40.0% | |
| GTTAGAATCCAAACATGAGG+AGG | + | Chr4:3498361-3498380 | MsG0480018335.01.T01:three_prime_UTR | 40.0% | |
| TAGCTTCATTAGACATGAGG+AGG | + | Chr4:3497939-3497958 | MsG0480018335.01.T01:CDS | 40.0% | |
| TGAATGTATTGCAAGCTGTG+AGG | + | Chr4:3497999-3498018 | MsG0480018335.01.T01:CDS | 40.0% | |
| TGTGGAATACACGCTCTTTA+TGG | + | Chr4:3496125-3496144 | MsG0480018335.01.T01:CDS | 40.0% | |
| TTACATGTCGTGGGATTTGT+GGG | + | Chr4:3497117-3497136 | MsG0480018335.01.T01:CDS | 40.0% | |
| TTCAAACTCCTCCTCATGTT+TGG | - | Chr4:3498372-3498391 | None:intergenic | 40.0% | |
| TTCTTCTCCACCCTTTGATT+TGG | + | Chr4:3496155-3496174 | MsG0480018335.01.T01:CDS | 40.0% | |
| TTTACATGTCGTGGGATTTG+TGG | + | Chr4:3497116-3497135 | MsG0480018335.01.T01:CDS | 40.0% | |
| ! | TCTTCTCCACCCTTTGATTT+GGG | + | Chr4:3496156-3496175 | MsG0480018335.01.T01:CDS | 40.0% |
| ! | TCTTTTGTTCTTCATGGCTG+TGG | + | Chr4:3496107-3496126 | MsG0480018335.01.T01:CDS | 40.0% |
| !! | ATGTAATGAAGGCATTAGGG+GGG | - | Chr4:3495838-3495857 | None:intergenic | 40.0% |
| !! | ATTGATTTGGCTGTTGGGTT+AGG | + | Chr4:3498049-3498068 | MsG0480018335.01.T01:CDS | 40.0% |
| !! | GGGGGGTATTTATAAGATTC+TGG | - | Chr4:3495821-3495840 | None:intergenic | 40.0% |
| !! | GTCTCTGAAATTAGTGGCAT+AGG | - | Chr4:3497679-3497698 | None:intergenic | 40.0% |
| !!! | TAGTCCTAAGAGCATTTTGG+AGG | + | Chr4:3497303-3497322 | MsG0480018335.01.T01:intron | 40.0% |
| ACATGAGGAGGATGAAGAGA+TGG | + | Chr4:3497951-3497970 | MsG0480018335.01.T01:CDS | 45.0% | |
| ATGCCGTGTTTGTTTGCTTG+TGG | + | Chr4:3496084-3496103 | MsG0480018335.01.T01:CDS | 45.0% | |
| CATGAGGAGGATGAAGAGAT+GGG | + | Chr4:3497952-3497971 | MsG0480018335.01.T01:CDS | 45.0% | |
| CATTCTCCAACCACCATGAA+CGG | + | Chr4:3495862-3495881 | MsG0480018335.01.T01:exon | 45.0% | |
| CCACATGACCCGAAAAAAAC+AGG | - | Chr4:3497907-3497926 | None:intergenic | 45.0% | |
| CGACAAAATCATCTCCCATC+TGG | - | Chr4:3498267-3498286 | None:intergenic | 45.0% | |
| GAATGAATCACCTGAGGCAA+TGG | - | Chr4:3497158-3497177 | None:intergenic | 45.0% | |
| GTAGGCAATGTGTGTATGTG+TGG | + | Chr4:3498238-3498257 | MsG0480018335.01.T01:three_prime_UTR | 45.0% | |
| GTGAGGTTACTTGGTACAAG+AGG | + | Chr4:3498016-3498035 | MsG0480018335.01.T01:CDS | 45.0% | |
| TACACGTGGCAACACATCAT+TGG | + | Chr4:3496061-3496080 | MsG0480018335.01.T01:CDS | 45.0% | |
| TCAAAGGGTGGAGAAGAAGA+AGG | - | Chr4:3496153-3496172 | None:intergenic | 45.0% | |
| TGTATGTGTGGATGCCAGAT+GGG | + | Chr4:3498250-3498269 | MsG0480018335.01.T01:three_prime_UTR | 45.0% | |
| TTCATGGTGGTTGGAGAATG+TGG | - | Chr4:3495862-3495881 | None:intergenic | 45.0% | |
| TTGCAAGCTGTGAGGTTACT+TGG | + | Chr4:3498007-3498026 | MsG0480018335.01.T01:CDS | 45.0% | |
| !!! | CCTGTTTTTTTCGGGTCATG+TGG | + | Chr4:3497904-3497923 | MsG0480018335.01.T01:CDS | 45.0% |
| !!! | GAACAGGGATTTTTGGGTTC+TGG | + | Chr4:3497848-3497867 | MsG0480018335.01.T01:intron | 45.0% |
| !!! | GTTTTTTTCGGGTCATGTGG+CGG | + | Chr4:3497907-3497926 | MsG0480018335.01.T01:CDS | 45.0% |
| !!! | TTTTTTTCGGGTCATGTGGC+GGG | + | Chr4:3497908-3497927 | MsG0480018335.01.T01:CDS | 45.0% |
| AGAGCCGAGATTGTTGCTCT+AGG | - | Chr4:3497089-3497108 | None:intergenic | 50.0% | |
| CTGGTGTGGACTTTCCAGTT+GGG | + | Chr4:3497867-3497886 | MsG0480018335.01.T01:CDS | 50.0% | |
| GAGGATGAAGAGATGGGAGA+TGG | + | Chr4:3497958-3497977 | MsG0480018335.01.T01:CDS | 50.0% | |
| GTGTATGTGTGGATGCCAGA+TGG | + | Chr4:3498249-3498268 | MsG0480018335.01.T01:three_prime_UTR | 50.0% | |
| TCTGGTGTGGACTTTCCAGT+TGG | + | Chr4:3497866-3497885 | MsG0480018335.01.T01:CDS | 50.0% | |
| TGAAGAGATGGGAGATGGCA+TGG | + | Chr4:3497963-3497982 | MsG0480018335.01.T01:CDS | 50.0% | |
| !!! | GGGATTTTTGGGTTCTGGTG+TGG | + | Chr4:3497853-3497872 | MsG0480018335.01.T01:intron | 50.0% |
| CACCTGAGGCAATGGTAGCT+GGG | - | Chr4:3497150-3497169 | None:intergenic | 55.0% | |
| GGTGTGTCTGCGTTTGAGGA+CGG | - | Chr4:3495917-3495936 | None:intergenic | 55.0% | |
| TCACCTGAGGCAATGGTAGC+TGG | - | Chr4:3497151-3497170 | None:intergenic | 55.0% | |
| TCTCCAACCACCATGAACGG+CGG | + | Chr4:3495865-3495884 | MsG0480018335.01.T01:exon | 55.0% | |
| ! | TGGTGGTGTGTCTGCGTTTG+AGG | - | Chr4:3495921-3495940 | None:intergenic | 55.0% |
| ! | TTGGCTGTTGGGTTAGGTGC+TGG | + | Chr4:3498055-3498074 | MsG0480018335.01.T01:CDS | 55.0% |
| CACCCAGCTACCATTGCCTC+AGG | + | Chr4:3497145-3497164 | MsG0480018335.01.T01:CDS | 60.0% | |
| CTGAGGCAATGGTAGCTGGG+TGG | - | Chr4:3497147-3497166 | None:intergenic | 60.0% | |
| GTGTCTGCGTTTGAGGACGG+TGG | - | Chr4:3495914-3495933 | None:intergenic | 60.0% | |
| TTTGAGGACGGTGGCGTCAC+CGG | - | Chr4:3495905-3495924 | None:intergenic | 60.0% | |
| GCGCCGCCGTTCATGGTGGT+TGG | - | Chr4:3495871-3495890 | None:intergenic | 70.0% | |
| GGCGTCACCGGAGGAAGAGG+CGG | - | Chr4:3495893-3495912 | None:intergenic | 70.0% | |
| GGTGGCGTCACCGGAGGAAG+AGG | - | Chr4:3495896-3495915 | None:intergenic | 70.0% | |
| AGAGGCGGCGCCGCCGTTCA+TGG | - | Chr4:3495878-3495897 | None:intergenic | 75.0% | |
| GAGGACGGTGGCGTCACCGG+AGG | - | Chr4:3495902-3495921 | None:intergenic | 75.0% | |
| ! | GGCGGCGCCGCCGTTCATGG+TGG | - | Chr4:3495875-3495894 | None:intergenic | 80.0% |
| ! | GGCGGCGCCGCCTCTTCCTC+CGG | + | Chr4:3495883-3495902 | MsG0480018335.01.T01:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 3495633 | 3498529 | 3495633 | ID=MsG0480018335.01;Name=MsG0480018335.01 |
| Chr4 | mRNA | 3495633 | 3498529 | 3495633 | ID=MsG0480018335.01.T01;Parent=MsG0480018335.01;Name=MsG0480018335.01.T01;_AED=0.44;_eAED=0.44;_QI=244|1|1|1|0.5|0.66|3|346|282 |
| Chr4 | exon | 3495633 | 3496257 | 3495633 | ID=MsG0480018335.01.T01:exon:1015;Parent=MsG0480018335.01.T01 |
| Chr4 | exon | 3497029 | 3497166 | 3497029 | ID=MsG0480018335.01.T01:exon:1016;Parent=MsG0480018335.01.T01 |
| Chr4 | exon | 3497854 | 3498529 | 3497854 | ID=MsG0480018335.01.T01:exon:1017;Parent=MsG0480018335.01.T01 |
| Chr4 | five_prime_UTR | 3495633 | 3495876 | 3495633 | ID=MsG0480018335.01.T01:five_prime_utr;Parent=MsG0480018335.01.T01 |
| Chr4 | CDS | 3495877 | 3496257 | 3495877 | ID=MsG0480018335.01.T01:cds;Parent=MsG0480018335.01.T01 |
| Chr4 | CDS | 3497029 | 3497166 | 3497029 | ID=MsG0480018335.01.T01:cds;Parent=MsG0480018335.01.T01 |
| Chr4 | CDS | 3497854 | 3498183 | 3497854 | ID=MsG0480018335.01.T01:cds;Parent=MsG0480018335.01.T01 |
| Chr4 | three_prime_UTR | 3498184 | 3498529 | 3498184 | ID=MsG0480018335.01.T01:three_prime_utr;Parent=MsG0480018335.01.T01 |
| Gene Sequence |
| Protein sequence |
