Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021349.01.T01 | GAU32288.1 | 93.269 | 104 | 6 | 1 | 4 | 106 | 3 | 106 | 4.67E-65 | 202 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021349.01.T01 | O65695 | 83.333 | 108 | 15 | 2 | 1 | 106 | 1 | 107 | 3.94E-60 | 182 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180004276.01 | MsG0480021349.01 | 0.820771 | 5.750051e-53 | 4.592007e-50 |
MsG0180004493.01 | MsG0480021349.01 | 0.817468 | 3.247492e-52 | 2.367069e-49 |
MsG0180005429.01 | MsG0480021349.01 | 0.840172 | 1.020708e-57 | 1.442109e-54 |
MsG0480021349.01 | MsG0680032060.01 | 0.823848 | 1.110730e-53 | 9.675592e-51 |
MsG0380017094.01 | MsG0480021349.01 | -0.822437 | 2.369991e-53 | 1.983705e-50 |
MsG0280009894.01 | MsG0480021349.01 | 0.816308 | 5.913949e-52 | 4.175883e-49 |
MsG0280009918.01 | MsG0480021349.01 | 0.808636 | 2.809300e-50 | 1.614540e-47 |
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0380017838.01 | MsG0480021349.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021349.01.T01 | MTR_4g072190 | 93.396 | 106 | 1 | 1 | 1 | 106 | 1 | 100 | 2.18e-68 | 200 |
MsG0480021349.01.T01 | MTR_3g117610 | 82.075 | 106 | 15 | 1 | 4 | 105 | 3 | 108 | 2.07e-61 | 183 |
MsG0480021349.01.T01 | MTR_5g021820 | 71.698 | 106 | 28 | 1 | 1 | 106 | 1 | 104 | 1.21e-53 | 163 |
MsG0480021349.01.T01 | MTR_3g113310 | 74.074 | 108 | 24 | 2 | 1 | 106 | 1 | 106 | 3.19e-52 | 159 |
MsG0480021349.01.T01 | MTR_8g076040 | 72.897 | 107 | 26 | 2 | 1 | 106 | 1 | 105 | 4.26e-52 | 159 |
MsG0480021349.01.T01 | MTR_6g077850 | 53.261 | 92 | 40 | 2 | 17 | 105 | 7 | 98 | 1.34e-29 | 102 |
MsG0480021349.01.T01 | MTR_4g072880 | 52.941 | 85 | 35 | 2 | 20 | 103 | 8 | 88 | 5.36e-27 | 95.5 |
MsG0480021349.01.T01 | MTR_4g072270 | 63.077 | 65 | 23 | 1 | 40 | 103 | 24 | 88 | 1.33e-25 | 92.0 |
MsG0480021349.01.T01 | MTR_4g072310 | 62.687 | 67 | 24 | 1 | 40 | 105 | 24 | 90 | 2.40e-25 | 91.3 |
MsG0480021349.01.T01 | MTR_4g072530 | 63.636 | 66 | 23 | 1 | 41 | 105 | 24 | 89 | 1.18e-24 | 89.4 |
MsG0480021349.01.T01 | MTR_4g072500 | 63.636 | 66 | 23 | 1 | 41 | 105 | 24 | 89 | 1.24e-24 | 89.4 |
MsG0480021349.01.T01 | MTR_4g072910 | 50.549 | 91 | 32 | 2 | 16 | 105 | 21 | 99 | 1.90e-24 | 89.4 |
MsG0480021349.01.T01 | MTR_4g072640 | 63.077 | 65 | 23 | 1 | 42 | 105 | 25 | 89 | 2.61e-24 | 88.6 |
MsG0480021349.01.T01 | MTR_4g072250 | 51.765 | 85 | 36 | 3 | 23 | 103 | 4 | 87 | 3.87e-24 | 88.2 |
MsG0480021349.01.T01 | MTR_4g072220 | 51.163 | 86 | 38 | 2 | 21 | 105 | 8 | 90 | 7.92e-24 | 87.4 |
MsG0480021349.01.T01 | MTR_4g072480 | 59.701 | 67 | 26 | 1 | 40 | 105 | 23 | 89 | 1.02e-23 | 87.0 |
MsG0480021349.01.T01 | MTR_4g072730 | 61.194 | 67 | 25 | 1 | 40 | 105 | 23 | 89 | 1.52e-23 | 86.7 |
MsG0480021349.01.T01 | MTR_4g072620 | 59.701 | 67 | 26 | 1 | 40 | 105 | 23 | 89 | 1.64e-23 | 86.7 |
MsG0480021349.01.T01 | MTR_4g072860 | 51.724 | 87 | 37 | 2 | 20 | 105 | 8 | 90 | 2.44e-23 | 86.3 |
MsG0480021349.01.T01 | MTR_4g072370 | 58.209 | 67 | 27 | 1 | 40 | 105 | 21 | 87 | 2.71e-23 | 85.9 |
MsG0480021349.01.T01 | MTR_4g072570 | 58.209 | 67 | 27 | 1 | 40 | 105 | 23 | 89 | 3.92e-23 | 85.9 |
MsG0480021349.01.T01 | MTR_5g008360 | 56.716 | 67 | 28 | 1 | 40 | 105 | 14 | 80 | 6.25e-23 | 85.1 |
MsG0480021349.01.T01 | MTR_4g072240 | 59.375 | 64 | 25 | 1 | 41 | 103 | 25 | 88 | 6.38e-23 | 85.1 |
MsG0480021349.01.T01 | MTR_4g072230 | 51.765 | 85 | 35 | 3 | 23 | 103 | 4 | 86 | 7.19e-23 | 85.1 |
MsG0480021349.01.T01 | MTR_5g008370 | 59.701 | 67 | 26 | 1 | 41 | 106 | 24 | 90 | 7.35e-23 | 86.3 |
MsG0480021349.01.T01 | MTR_4g072820 | 58.209 | 67 | 27 | 1 | 41 | 106 | 19 | 85 | 7.56e-23 | 84.7 |
MsG0480021349.01.T01 | MTR_4g072560 | 50.000 | 90 | 38 | 3 | 18 | 105 | 13 | 97 | 1.15e-22 | 84.7 |
MsG0480021349.01.T01 | MTR_4g072980 | 50.549 | 91 | 33 | 3 | 18 | 106 | 13 | 93 | 1.19e-22 | 84.7 |
MsG0480021349.01.T01 | MTR_4g072260 | 48.837 | 86 | 40 | 2 | 21 | 105 | 8 | 90 | 1.45e-22 | 84.3 |
MsG0480021349.01.T01 | MTR_3g117640 | 60.294 | 68 | 25 | 2 | 41 | 106 | 33 | 100 | 1.71e-22 | 84.3 |
MsG0480021349.01.T01 | MTR_3g084150 | 56.923 | 65 | 27 | 1 | 40 | 103 | 23 | 87 | 2.27e-22 | 84.0 |
MsG0480021349.01.T01 | MTR_4g072660 | 60.000 | 65 | 25 | 1 | 40 | 103 | 18 | 82 | 2.37e-22 | 83.6 |
MsG0480021349.01.T01 | MTR_3g084180 | 56.923 | 65 | 27 | 1 | 40 | 103 | 23 | 87 | 2.86e-22 | 83.6 |
MsG0480021349.01.T01 | MTR_3g084210 | 59.701 | 67 | 26 | 1 | 40 | 105 | 23 | 89 | 3.48e-22 | 83.2 |
MsG0480021349.01.T01 | MTR_3g084250 | 58.209 | 67 | 27 | 1 | 40 | 105 | 23 | 89 | 3.52e-22 | 83.2 |
MsG0480021349.01.T01 | MTR_3g084240 | 47.619 | 84 | 41 | 2 | 23 | 103 | 4 | 87 | 3.56e-22 | 83.2 |
MsG0480021349.01.T01 | MTR_4g072890 | 48.837 | 86 | 40 | 2 | 21 | 105 | 8 | 90 | 3.74e-22 | 83.2 |
MsG0480021349.01.T01 | MTR_4g072330 | 56.061 | 66 | 28 | 1 | 41 | 105 | 22 | 87 | 4.88e-22 | 82.8 |
MsG0480021349.01.T01 | MTR_8g461410 | 55.385 | 65 | 28 | 1 | 40 | 103 | 23 | 87 | 4.94e-22 | 82.8 |
MsG0480021349.01.T01 | MTR_4g072540 | 56.923 | 65 | 27 | 1 | 40 | 103 | 19 | 83 | 5.05e-22 | 82.8 |
MsG0480021349.01.T01 | MTR_4g072850 | 58.462 | 65 | 26 | 1 | 40 | 103 | 25 | 89 | 5.21e-22 | 82.8 |
MsG0480021349.01.T01 | MTR_3g084170 | 58.462 | 65 | 26 | 1 | 40 | 103 | 23 | 87 | 5.33e-22 | 82.8 |
MsG0480021349.01.T01 | MTR_3g084220 | 58.462 | 65 | 26 | 1 | 40 | 103 | 23 | 87 | 6.77e-22 | 82.4 |
MsG0480021349.01.T01 | MTR_4g072870 | 45.556 | 90 | 44 | 2 | 17 | 105 | 5 | 90 | 8.38e-22 | 82.4 |
MsG0480021349.01.T01 | MTR_4g072300 | 56.250 | 64 | 27 | 1 | 41 | 103 | 25 | 88 | 9.55e-22 | 82.0 |
MsG0480021349.01.T01 | MTR_4g072680 | 56.716 | 67 | 28 | 1 | 40 | 105 | 23 | 89 | 1.54e-21 | 81.6 |
MsG0480021349.01.T01 | MTR_3g110038 | 56.923 | 65 | 27 | 1 | 40 | 103 | 23 | 87 | 1.57e-21 | 81.6 |
MsG0480021349.01.T01 | MTR_3g117630 | 58.462 | 65 | 26 | 1 | 40 | 103 | 23 | 87 | 2.45e-21 | 81.3 |
MsG0480021349.01.T01 | MTR_4g072460 | 56.716 | 67 | 28 | 1 | 40 | 105 | 23 | 89 | 2.62e-21 | 81.3 |
MsG0480021349.01.T01 | MTR_3g084230 | 58.209 | 67 | 27 | 1 | 40 | 105 | 23 | 89 | 2.77e-21 | 80.9 |
MsG0480021349.01.T01 | MTR_3g084160 | 56.716 | 67 | 28 | 1 | 40 | 105 | 23 | 89 | 3.15e-21 | 80.9 |
MsG0480021349.01.T01 | MTR_4g072580 | 56.923 | 65 | 27 | 1 | 40 | 103 | 18 | 82 | 3.32e-21 | 80.5 |
MsG0480021349.01.T01 | MTR_4g072610 | 55.224 | 67 | 29 | 1 | 40 | 105 | 17 | 83 | 3.49e-21 | 80.5 |
MsG0480021349.01.T01 | MTR_4g072670 | 55.224 | 67 | 29 | 1 | 40 | 105 | 19 | 85 | 3.64e-21 | 80.5 |
MsG0480021349.01.T01 | MTR_4g072590 | 53.731 | 67 | 30 | 1 | 40 | 105 | 18 | 84 | 4.98e-21 | 80.1 |
MsG0480021349.01.T01 | MTR_4g072490 | 46.591 | 88 | 36 | 2 | 17 | 103 | 5 | 82 | 7.29e-21 | 79.7 |
MsG0480021349.01.T01 | MTR_4g072740 | 46.667 | 90 | 37 | 2 | 17 | 105 | 5 | 84 | 9.58e-21 | 79.3 |
MsG0480021349.01.T01 | MTR_1g063950 | 50.725 | 69 | 34 | 0 | 33 | 101 | 39 | 107 | 1.09e-20 | 80.5 |
MsG0480021349.01.T01 | MTR_4g072720 | 53.846 | 65 | 29 | 1 | 40 | 103 | 19 | 83 | 1.47e-20 | 79.0 |
MsG0480021349.01.T01 | MTR_8g461420 | 56.716 | 67 | 28 | 1 | 40 | 105 | 23 | 89 | 1.66e-20 | 79.0 |
MsG0480021349.01.T01 | MTR_4g050700 | 57.812 | 64 | 26 | 1 | 41 | 103 | 25 | 88 | 1.70e-20 | 79.0 |
MsG0480021349.01.T01 | MTR_2g012410 | 57.812 | 64 | 26 | 1 | 41 | 103 | 25 | 88 | 1.70e-20 | 79.0 |
MsG0480021349.01.T01 | MTR_3g110045 | 60.000 | 65 | 25 | 1 | 40 | 103 | 82 | 146 | 1.95e-20 | 80.5 |
MsG0480021349.01.T01 | MTR_3g084190 | 55.224 | 67 | 29 | 1 | 40 | 105 | 23 | 89 | 2.01e-20 | 79.0 |
MsG0480021349.01.T01 | MTR_4g072510 | 53.846 | 65 | 29 | 1 | 40 | 103 | 19 | 83 | 2.02e-20 | 78.6 |
MsG0480021349.01.T01 | MTR_4g072830 | 55.385 | 65 | 28 | 1 | 40 | 103 | 21 | 85 | 2.40e-20 | 78.6 |
MsG0480021349.01.T01 | MTR_3g110042 | 55.224 | 67 | 29 | 1 | 40 | 105 | 23 | 89 | 2.77e-20 | 78.6 |
MsG0480021349.01.T01 | MTR_4g072940 | 54.688 | 64 | 28 | 1 | 40 | 102 | 55 | 118 | 2.80e-20 | 79.3 |
MsG0480021349.01.T01 | MTR_4g072690 | 55.385 | 65 | 28 | 1 | 40 | 103 | 18 | 82 | 4.92e-20 | 77.8 |
MsG0480021349.01.T01 | MTR_4g072630 | 52.308 | 65 | 30 | 1 | 40 | 103 | 19 | 83 | 6.36e-20 | 77.4 |
MsG0480021349.01.T01 | MTR_4g072470 | 46.667 | 90 | 37 | 2 | 17 | 105 | 5 | 84 | 6.90e-20 | 77.4 |
MsG0480021349.01.T01 | MTR_3g084260 | 56.250 | 64 | 27 | 1 | 41 | 103 | 25 | 88 | 7.25e-20 | 77.4 |
MsG0480021349.01.T01 | MTR_4g072465 | 53.846 | 65 | 29 | 1 | 40 | 103 | 19 | 83 | 7.73e-20 | 77.0 |
MsG0480021349.01.T01 | MTR_7g101740 | 48.611 | 72 | 37 | 0 | 33 | 104 | 31 | 102 | 1.39e-19 | 77.4 |
MsG0480021349.01.T01 | MTR_4g072550 | 57.812 | 64 | 26 | 1 | 41 | 103 | 35 | 98 | 1.56e-19 | 77.0 |
MsG0480021349.01.T01 | MTR_4g072600 | 53.731 | 67 | 30 | 1 | 40 | 105 | 18 | 84 | 1.58e-19 | 76.3 |
MsG0480021349.01.T01 | MTR_1g024085 | 44.944 | 89 | 47 | 1 | 17 | 105 | 14 | 100 | 1.89e-19 | 77.8 |
MsG0480021349.01.T01 | MTR_3g110032 | 54.688 | 64 | 28 | 1 | 41 | 103 | 25 | 88 | 1.97e-19 | 76.3 |
MsG0480021349.01.T01 | MTR_4g072650 | 52.308 | 65 | 30 | 1 | 40 | 103 | 17 | 81 | 3.72e-19 | 75.5 |
MsG0480021349.01.T01 | MTR_4g072770 | 55.385 | 65 | 28 | 1 | 42 | 105 | 15 | 79 | 7.15e-19 | 74.7 |
MsG0480021349.01.T01 | MTR_4g072450 | 53.846 | 65 | 29 | 1 | 40 | 103 | 18 | 82 | 9.77e-19 | 74.3 |
MsG0480021349.01.T01 | MTR_4g072380 | 46.591 | 88 | 37 | 2 | 17 | 103 | 5 | 83 | 2.72e-18 | 73.2 |
MsG0480021349.01.T01 | MTR_2g043960 | 52.174 | 69 | 33 | 0 | 37 | 105 | 71 | 139 | 4.02e-18 | 74.7 |
MsG0480021349.01.T01 | MTR_1g094750 | 44.872 | 78 | 40 | 1 | 24 | 101 | 35 | 109 | 6.17e-18 | 73.2 |
MsG0480021349.01.T01 | MTR_1g061570 | 40.260 | 77 | 46 | 0 | 25 | 101 | 2 | 78 | 1.09e-17 | 72.8 |
MsG0480021349.01.T01 | MTR_4g124750 | 42.857 | 91 | 48 | 1 | 20 | 106 | 43 | 133 | 2.42e-17 | 72.8 |
MsG0480021349.01.T01 | MTR_8g461210 | 36.538 | 104 | 58 | 2 | 3 | 106 | 4 | 99 | 6.44e-17 | 70.5 |
MsG0480021349.01.T01 | MTR_5g008350 | 51.724 | 58 | 27 | 1 | 40 | 96 | 18 | 75 | 6.70e-17 | 69.3 |
MsG0480021349.01.T01 | MTR_1g009150 | 49.231 | 65 | 33 | 0 | 41 | 105 | 70 | 134 | 1.08e-16 | 71.6 |
MsG0480021349.01.T01 | MTR_3g109160 | 40.230 | 87 | 49 | 1 | 19 | 105 | 49 | 132 | 1.80e-16 | 70.9 |
MsG0480021349.01.T01 | MTR_4g072930 | 55.224 | 67 | 25 | 2 | 42 | 103 | 41 | 107 | 3.12e-16 | 68.6 |
MsG0480021349.01.T01 | MTR_4g072750 | 58.333 | 48 | 20 | 0 | 41 | 88 | 26 | 73 | 4.16e-16 | 67.8 |
MsG0480021349.01.T01 | MTR_7g118010 | 41.250 | 80 | 39 | 2 | 28 | 105 | 15 | 88 | 1.21e-15 | 67.0 |
MsG0480021349.01.T01 | MTR_3g110035 | 57.143 | 56 | 23 | 1 | 51 | 105 | 80 | 135 | 1.79e-15 | 67.4 |
MsG0480021349.01.T01 | MTR_3g092220 | 40.260 | 77 | 44 | 1 | 31 | 105 | 22 | 98 | 1.91e-15 | 66.6 |
MsG0480021349.01.T01 | MTR_7g104950 | 45.902 | 61 | 33 | 0 | 45 | 105 | 53 | 113 | 2.37e-15 | 67.0 |
MsG0480021349.01.T01 | MTR_4g025830 | 44.776 | 67 | 34 | 1 | 42 | 105 | 79 | 145 | 2.94e-15 | 67.4 |
MsG0480021349.01.T01 | MTR_1g059770 | 39.189 | 74 | 45 | 0 | 33 | 106 | 40 | 113 | 3.27e-15 | 66.6 |
MsG0480021349.01.T01 | MTR_7g104940 | 45.902 | 61 | 33 | 0 | 45 | 105 | 53 | 113 | 4.15e-15 | 66.2 |
MsG0480021349.01.T01 | MTR_4g072290 | 55.769 | 52 | 22 | 1 | 55 | 105 | 25 | 76 | 4.22e-15 | 65.1 |
MsG0480021349.01.T01 | MTR_2g095430 | 43.478 | 69 | 35 | 1 | 30 | 94 | 33 | 101 | 7.44e-15 | 65.9 |
MsG0480021349.01.T01 | MTR_3g084200 | 54.348 | 46 | 21 | 0 | 40 | 85 | 23 | 68 | 8.87e-15 | 64.7 |
MsG0480021349.01.T01 | MTR_4g072160 | 37.113 | 97 | 54 | 1 | 9 | 105 | 11 | 100 | 1.08e-14 | 65.5 |
MsG0480021349.01.T01 | MTR_0388s0020 | 43.478 | 69 | 36 | 1 | 40 | 105 | 73 | 141 | 1.80e-14 | 65.1 |
MsG0480021349.01.T01 | MTR_4g005320 | 43.750 | 64 | 36 | 0 | 42 | 105 | 70 | 133 | 1.89e-14 | 65.5 |
MsG0480021349.01.T01 | MTR_4g057800 | 42.697 | 89 | 44 | 3 | 10 | 94 | 9 | 94 | 3.08e-14 | 64.3 |
MsG0480021349.01.T01 | MTR_4g057810 | 40.659 | 91 | 50 | 3 | 13 | 101 | 11 | 99 | 1.24e-13 | 62.4 |
MsG0480021349.01.T01 | MTR_4g072280 | 55.814 | 43 | 19 | 0 | 41 | 83 | 25 | 67 | 3.34e-13 | 60.1 |
MsG0480021349.01.T01 | MTR_8g026730 | 42.424 | 66 | 36 | 1 | 42 | 105 | 27 | 92 | 3.66e-13 | 60.8 |
MsG0480021349.01.T01 | MTR_2g066830 | 35.385 | 65 | 42 | 0 | 42 | 106 | 58 | 122 | 3.10e-12 | 59.3 |
MsG0480021349.01.T01 | MTR_4g021810 | 43.077 | 65 | 36 | 1 | 42 | 105 | 26 | 90 | 6.84e-12 | 57.4 |
MsG0480021349.01.T01 | MTR_3g098970 | 42.105 | 57 | 33 | 0 | 42 | 98 | 53 | 109 | 1.23e-11 | 57.8 |
MsG0480021349.01.T01 | MTR_7g101920 | 46.429 | 56 | 28 | 1 | 41 | 94 | 34 | 89 | 2.02e-11 | 56.2 |
MsG0480021349.01.T01 | MTR_4g005310 | 43.548 | 62 | 33 | 1 | 42 | 101 | 62 | 123 | 5.54e-11 | 56.2 |
MsG0480021349.01.T01 | MTR_8g101520 | 35.294 | 102 | 58 | 1 | 1 | 94 | 1 | 102 | 7.66e-11 | 55.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021349.01.T01 | AT4G34760 | 83.333 | 108 | 15 | 2 | 1 | 106 | 1 | 107 | 4.02e-61 | 182 |
MsG0480021349.01.T01 | AT2G21220 | 78.095 | 105 | 21 | 1 | 1 | 105 | 1 | 103 | 9.06e-57 | 171 |
MsG0480021349.01.T01 | AT4G38860 | 78.505 | 107 | 20 | 2 | 1 | 106 | 1 | 105 | 2.35e-55 | 167 |
MsG0480021349.01.T01 | AT2G16580 | 75.229 | 109 | 23 | 2 | 1 | 106 | 1 | 108 | 6.35e-55 | 166 |
MsG0480021349.01.T01 | AT1G75580 | 76.190 | 105 | 21 | 2 | 6 | 106 | 4 | 108 | 1.50e-53 | 163 |
MsG0480021349.01.T01 | AT1G19830 | 66.087 | 115 | 28 | 3 | 1 | 106 | 1 | 113 | 2.02e-48 | 150 |
MsG0480021349.01.T01 | AT4G36110 | 70.755 | 106 | 29 | 1 | 1 | 106 | 1 | 104 | 8.83e-48 | 148 |
MsG0480021349.01.T01 | AT2G18010 | 64.286 | 112 | 34 | 1 | 1 | 106 | 1 | 112 | 8.76e-46 | 143 |
MsG0480021349.01.T01 | AT5G66260 | 66.292 | 89 | 28 | 1 | 17 | 105 | 11 | 97 | 3.11e-35 | 116 |
MsG0480021349.01.T01 | AT2G21210 | 48.889 | 90 | 41 | 3 | 17 | 103 | 5 | 92 | 2.02e-24 | 89.4 |
MsG0480021349.01.T01 | AT4G34770 | 61.765 | 68 | 23 | 2 | 41 | 105 | 34 | 101 | 5.96e-24 | 88.2 |
MsG0480021349.01.T01 | AT2G21210 | 48.889 | 90 | 41 | 3 | 17 | 103 | 72 | 159 | 7.90e-24 | 89.7 |
MsG0480021349.01.T01 | AT4G38840 | 64.615 | 65 | 21 | 2 | 41 | 103 | 32 | 96 | 1.45e-23 | 87.0 |
MsG0480021349.01.T01 | AT4G13790 | 55.714 | 70 | 28 | 2 | 40 | 106 | 23 | 92 | 1.44e-22 | 84.3 |
MsG0480021349.01.T01 | AT3G51200 | 48.387 | 93 | 40 | 3 | 15 | 105 | 17 | 103 | 1.47e-22 | 84.7 |
MsG0480021349.01.T01 | AT4G34810 | 52.747 | 91 | 36 | 4 | 18 | 103 | 26 | 114 | 1.65e-22 | 85.1 |
MsG0480021349.01.T01 | AT5G18080 | 47.253 | 91 | 35 | 3 | 18 | 106 | 11 | 90 | 2.23e-21 | 81.3 |
MsG0480021349.01.T01 | AT4G34800 | 60.938 | 64 | 21 | 2 | 42 | 101 | 21 | 84 | 2.28e-21 | 81.3 |
MsG0480021349.01.T01 | AT4G38825 | 48.148 | 81 | 40 | 2 | 27 | 105 | 8 | 88 | 2.95e-21 | 80.9 |
MsG0480021349.01.T01 | AT4G38850 | 47.312 | 93 | 31 | 3 | 18 | 106 | 11 | 89 | 3.79e-21 | 80.5 |
MsG0480021349.01.T01 | AT2G21200 | 58.209 | 67 | 26 | 2 | 41 | 105 | 20 | 86 | 4.30e-21 | 80.5 |
MsG0480021349.01.T01 | AT5G18030 | 56.716 | 67 | 27 | 2 | 42 | 106 | 22 | 88 | 4.35e-21 | 80.5 |
MsG0480021349.01.T01 | AT4G34780 | 54.930 | 71 | 28 | 2 | 40 | 106 | 26 | 96 | 6.96e-21 | 80.5 |
MsG0480021349.01.T01 | AT5G18020 | 60.938 | 64 | 23 | 2 | 42 | 103 | 24 | 87 | 7.37e-21 | 80.1 |
MsG0480021349.01.T01 | AT5G18010 | 46.154 | 91 | 36 | 3 | 18 | 106 | 11 | 90 | 1.09e-20 | 79.3 |
MsG0480021349.01.T01 | AT5G18050 | 55.224 | 67 | 28 | 2 | 42 | 106 | 24 | 90 | 1.34e-20 | 79.3 |
MsG0480021349.01.T01 | AT3G03830 | 57.971 | 69 | 25 | 2 | 42 | 106 | 24 | 92 | 1.57e-20 | 79.3 |
MsG0480021349.01.T01 | AT5G18060 | 58.462 | 65 | 25 | 2 | 43 | 105 | 25 | 89 | 1.74e-20 | 79.0 |
MsG0480021349.01.T01 | AT3G43120 | 46.512 | 86 | 45 | 1 | 21 | 106 | 59 | 143 | 1.11e-19 | 79.0 |
MsG0480021349.01.T01 | AT3G03820 | 54.286 | 70 | 28 | 2 | 41 | 106 | 26 | 95 | 2.12e-19 | 76.3 |
MsG0480021349.01.T01 | AT3G03840 | 55.072 | 69 | 28 | 2 | 41 | 106 | 26 | 94 | 2.96e-19 | 75.9 |
MsG0480021349.01.T01 | AT3G20220 | 49.180 | 61 | 30 | 1 | 42 | 101 | 47 | 107 | 4.56e-19 | 76.3 |
MsG0480021349.01.T01 | AT1G75590 | 40.659 | 91 | 54 | 0 | 9 | 99 | 9 | 99 | 6.50e-19 | 76.6 |
MsG0480021349.01.T01 | AT2G37030 | 52.459 | 61 | 29 | 0 | 38 | 98 | 45 | 105 | 1.41e-18 | 75.1 |
MsG0480021349.01.T01 | AT5G20810 | 53.846 | 65 | 30 | 0 | 37 | 101 | 74 | 138 | 1.50e-18 | 76.3 |
MsG0480021349.01.T01 | AT4G34790 | 56.923 | 65 | 25 | 2 | 42 | 103 | 39 | 103 | 2.94e-18 | 73.9 |
MsG0480021349.01.T01 | AT4G34750 | 39.604 | 101 | 54 | 2 | 8 | 105 | 4 | 100 | 3.12e-18 | 75.1 |
MsG0480021349.01.T01 | AT4G34750 | 39.604 | 101 | 54 | 2 | 8 | 105 | 4 | 100 | 3.12e-18 | 75.1 |
MsG0480021349.01.T01 | AT5G20810 | 53.846 | 65 | 30 | 0 | 37 | 101 | 74 | 138 | 4.00e-18 | 75.5 |
MsG0480021349.01.T01 | AT3G03850 | 55.224 | 67 | 27 | 2 | 43 | 106 | 26 | 92 | 6.53e-18 | 72.4 |
MsG0480021349.01.T01 | AT1G19840 | 41.573 | 89 | 51 | 1 | 17 | 105 | 17 | 104 | 4.52e-17 | 72.0 |
MsG0480021349.01.T01 | AT5G10990 | 40.964 | 83 | 48 | 1 | 17 | 99 | 17 | 98 | 8.05e-17 | 71.2 |
MsG0480021349.01.T01 | AT3G60690 | 46.575 | 73 | 36 | 1 | 36 | 105 | 82 | 154 | 1.02e-15 | 68.9 |
MsG0480021349.01.T01 | AT1G56150 | 31.373 | 102 | 58 | 1 | 17 | 106 | 1 | 102 | 1.96e-15 | 66.6 |
MsG0480021349.01.T01 | AT2G28085 | 47.059 | 68 | 32 | 1 | 31 | 94 | 44 | 111 | 2.18e-15 | 67.0 |
MsG0480021349.01.T01 | AT4G31320 | 45.312 | 64 | 35 | 0 | 42 | 105 | 80 | 143 | 2.63e-15 | 68.2 |
MsG0480021349.01.T01 | AT3G61900 | 45.588 | 68 | 34 | 1 | 41 | 105 | 29 | 96 | 3.10e-15 | 67.0 |
MsG0480021349.01.T01 | AT2G45210 | 41.892 | 74 | 40 | 1 | 35 | 105 | 72 | 145 | 5.47e-15 | 67.0 |
MsG0480021349.01.T01 | AT2G24400 | 46.875 | 64 | 34 | 0 | 42 | 105 | 64 | 127 | 5.57e-15 | 67.0 |
MsG0480021349.01.T01 | AT3G53250 | 42.466 | 73 | 37 | 2 | 26 | 98 | 38 | 105 | 5.67e-14 | 63.2 |
MsG0480021349.01.T01 | AT3G53250 | 37.500 | 96 | 55 | 2 | 3 | 98 | 46 | 136 | 1.03e-13 | 63.5 |
MsG0480021349.01.T01 | AT3G12830 | 40.000 | 65 | 39 | 0 | 42 | 106 | 50 | 114 | 1.47e-13 | 62.4 |
MsG0480021349.01.T01 | AT2G46690 | 42.647 | 68 | 36 | 1 | 41 | 105 | 23 | 90 | 1.77e-13 | 62.0 |
MsG0480021349.01.T01 | AT1G16510 | 40.000 | 65 | 39 | 0 | 42 | 106 | 54 | 118 | 4.33e-13 | 61.6 |
MsG0480021349.01.T01 | AT5G53590 | 44.286 | 70 | 34 | 1 | 41 | 105 | 45 | 114 | 4.70e-13 | 61.2 |
MsG0480021349.01.T01 | AT1G79130 | 40.000 | 65 | 39 | 0 | 42 | 106 | 48 | 112 | 6.67e-13 | 60.8 |
MsG0480021349.01.T01 | AT2G36210 | 38.961 | 77 | 45 | 2 | 31 | 105 | 42 | 118 | 1.54e-12 | 59.7 |
MsG0480021349.01.T01 | AT4G09530 | 43.750 | 64 | 32 | 2 | 42 | 101 | 28 | 91 | 3.33e-12 | 58.2 |
MsG0480021349.01.T01 | AT4G00880 | 42.424 | 66 | 36 | 1 | 42 | 105 | 28 | 93 | 6.10e-12 | 58.2 |
MsG0480021349.01.T01 | AT1G76190 | 39.683 | 63 | 37 | 1 | 44 | 106 | 23 | 84 | 8.06e-12 | 57.8 |
MsG0480021349.01.T01 | AT4G12410 | 41.791 | 67 | 36 | 1 | 42 | 105 | 76 | 142 | 8.63e-11 | 55.8 |
MsG0480021349.01.T01 | AT1G20470 | 42.857 | 63 | 35 | 1 | 44 | 106 | 25 | 86 | 9.80e-11 | 55.5 |
Find 9 sgRNAs with CRISPR-Local
Find 19 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGTCAAGCTGAAGAAGAATT+TGG | 0.180585 | 4:+56924728 | MsG0480021349.01.T01:CDS |
GTTGGAGTATTTCTTGATAA+TGG | 0.303731 | 4:-56924510 | None:intergenic |
TAGACAGGAAAATGACCTTT+TGG | 0.421755 | 4:-56924632 | None:intergenic |
CTCAAAAGATGTTCAAGCTT+AGG | 0.460632 | 4:+56924566 | MsG0480021349.01.T01:CDS |
TGATGATAATGAACTACCTA+TGG | 0.494980 | 4:+56924604 | MsG0480021349.01.T01:CDS |
CGAAGTAGTGATTGAAACTC+AGG | 0.507028 | 4:-56924707 | None:intergenic |
CTACCTATGGATGTTCCAAA+AGG | 0.526934 | 4:+56924617 | MsG0480021349.01.T01:CDS |
TTGGAACAATATATCTACTA+CGG | 0.543081 | 4:-56924667 | None:intergenic |
CTTCTTGACAAGGAATAGTG+AGG | 0.705041 | 4:-56924769 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | GGATGAGTTAAAAAAGATAT+TGG | - | Chr4:56924689-56924708 | None:intergenic | 25.0% |
! | TTGGAACAATATATCTACTA+CGG | - | Chr4:56924670-56924689 | None:intergenic | 25.0% |
!!! | ATTTGGTTTTGATCATGATA+TGG | + | Chr4:56924745-56924764 | MsG0480021349.01.T01:CDS | 25.0% |
!!! | TTTGGTTTTGATCATGATAT+GGG | + | Chr4:56924746-56924765 | MsG0480021349.01.T01:CDS | 25.0% |
TGAAAAACAACTTCTTGACA+AGG | - | Chr4:56924782-56924801 | None:intergenic | 30.0% | |
! | GTTGGAGTATTTCTTGATAA+TGG | - | Chr4:56924513-56924532 | None:intergenic | 30.0% |
! | TGATGATAATGAACTACCTA+TGG | + | Chr4:56924604-56924623 | MsG0480021349.01.T01:CDS | 30.0% |
! | TGTTTCAAAACTGCATTTTG+AGG | - | Chr4:56924542-56924561 | None:intergenic | 30.0% |
CTCAAAAGATGTTCAAGCTT+AGG | + | Chr4:56924566-56924585 | MsG0480021349.01.T01:CDS | 35.0% | |
! | CTAAGCTTGAACATCTTTTG+AGG | - | Chr4:56924568-56924587 | None:intergenic | 35.0% |
! | TAGACAGGAAAATGACCTTT+TGG | - | Chr4:56924635-56924654 | None:intergenic | 35.0% |
!!! | TGCATTTTGAGGTAGTTTGT+TGG | - | Chr4:56924531-56924550 | None:intergenic | 35.0% |
CGAAGTAGTGATTGAAACTC+AGG | - | Chr4:56924710-56924729 | None:intergenic | 40.0% | |
CGTCAAGCTGAAGAAGAATT+TGG | + | Chr4:56924728-56924747 | MsG0480021349.01.T01:CDS | 40.0% | |
CTACCTATGGATGTTCCAAA+AGG | + | Chr4:56924617-56924636 | MsG0480021349.01.T01:CDS | 40.0% | |
CTTCTTGACAAGGAATAGTG+AGG | - | Chr4:56924772-56924791 | None:intergenic | 40.0% | |
!!! | TGACCTTTTGGAACATCCAT+AGG | - | Chr4:56924623-56924642 | None:intergenic | 40.0% |
!! | GGTCATTTTCCTGTCTACGT+AGG | + | Chr4:56924638-56924657 | MsG0480021349.01.T01:CDS | 45.0% |
! | CGGTTTTCACCTACGTAGAC+AGG | - | Chr4:56924650-56924669 | None:intergenic | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 56924506 | 56924826 | 56924506 | ID=MsG0480021349.01;Name=MsG0480021349.01 |
Chr4 | mRNA | 56924506 | 56924826 | 56924506 | ID=MsG0480021349.01.T01;Parent=MsG0480021349.01;Name=MsG0480021349.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|106 |
Chr4 | exon | 56924506 | 56924826 | 56924506 | ID=MsG0480021349.01.T01:exon:1354;Parent=MsG0480021349.01.T01 |
Chr4 | CDS | 56924506 | 56924826 | 56924506 | ID=MsG0480021349.01.T01:cds;Parent=MsG0480021349.01.T01 |
Gene Sequence |
Protein sequence |