AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021349.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021349.01.T01 MTR_4g072190 93.396 106 1 1 1 106 1 100 2.18e-68 200
MsG0480021349.01.T01 MTR_3g117610 82.075 106 15 1 4 105 3 108 2.07e-61 183
MsG0480021349.01.T01 MTR_5g021820 71.698 106 28 1 1 106 1 104 1.21e-53 163
MsG0480021349.01.T01 MTR_3g113310 74.074 108 24 2 1 106 1 106 3.19e-52 159
MsG0480021349.01.T01 MTR_8g076040 72.897 107 26 2 1 106 1 105 4.26e-52 159
MsG0480021349.01.T01 MTR_6g077850 53.261 92 40 2 17 105 7 98 1.34e-29 102
MsG0480021349.01.T01 MTR_4g072880 52.941 85 35 2 20 103 8 88 5.36e-27 95.5
MsG0480021349.01.T01 MTR_4g072270 63.077 65 23 1 40 103 24 88 1.33e-25 92.0
MsG0480021349.01.T01 MTR_4g072310 62.687 67 24 1 40 105 24 90 2.40e-25 91.3
MsG0480021349.01.T01 MTR_4g072530 63.636 66 23 1 41 105 24 89 1.18e-24 89.4
MsG0480021349.01.T01 MTR_4g072500 63.636 66 23 1 41 105 24 89 1.24e-24 89.4
MsG0480021349.01.T01 MTR_4g072910 50.549 91 32 2 16 105 21 99 1.90e-24 89.4
MsG0480021349.01.T01 MTR_4g072640 63.077 65 23 1 42 105 25 89 2.61e-24 88.6
MsG0480021349.01.T01 MTR_4g072250 51.765 85 36 3 23 103 4 87 3.87e-24 88.2
MsG0480021349.01.T01 MTR_4g072220 51.163 86 38 2 21 105 8 90 7.92e-24 87.4
MsG0480021349.01.T01 MTR_4g072480 59.701 67 26 1 40 105 23 89 1.02e-23 87.0
MsG0480021349.01.T01 MTR_4g072730 61.194 67 25 1 40 105 23 89 1.52e-23 86.7
MsG0480021349.01.T01 MTR_4g072620 59.701 67 26 1 40 105 23 89 1.64e-23 86.7
MsG0480021349.01.T01 MTR_4g072860 51.724 87 37 2 20 105 8 90 2.44e-23 86.3
MsG0480021349.01.T01 MTR_4g072370 58.209 67 27 1 40 105 21 87 2.71e-23 85.9
MsG0480021349.01.T01 MTR_4g072570 58.209 67 27 1 40 105 23 89 3.92e-23 85.9
MsG0480021349.01.T01 MTR_5g008360 56.716 67 28 1 40 105 14 80 6.25e-23 85.1
MsG0480021349.01.T01 MTR_4g072240 59.375 64 25 1 41 103 25 88 6.38e-23 85.1
MsG0480021349.01.T01 MTR_4g072230 51.765 85 35 3 23 103 4 86 7.19e-23 85.1
MsG0480021349.01.T01 MTR_5g008370 59.701 67 26 1 41 106 24 90 7.35e-23 86.3
MsG0480021349.01.T01 MTR_4g072820 58.209 67 27 1 41 106 19 85 7.56e-23 84.7
MsG0480021349.01.T01 MTR_4g072560 50.000 90 38 3 18 105 13 97 1.15e-22 84.7
MsG0480021349.01.T01 MTR_4g072980 50.549 91 33 3 18 106 13 93 1.19e-22 84.7
MsG0480021349.01.T01 MTR_4g072260 48.837 86 40 2 21 105 8 90 1.45e-22 84.3
MsG0480021349.01.T01 MTR_3g117640 60.294 68 25 2 41 106 33 100 1.71e-22 84.3
MsG0480021349.01.T01 MTR_3g084150 56.923 65 27 1 40 103 23 87 2.27e-22 84.0
MsG0480021349.01.T01 MTR_4g072660 60.000 65 25 1 40 103 18 82 2.37e-22 83.6
MsG0480021349.01.T01 MTR_3g084180 56.923 65 27 1 40 103 23 87 2.86e-22 83.6
MsG0480021349.01.T01 MTR_3g084210 59.701 67 26 1 40 105 23 89 3.48e-22 83.2
MsG0480021349.01.T01 MTR_3g084250 58.209 67 27 1 40 105 23 89 3.52e-22 83.2
MsG0480021349.01.T01 MTR_3g084240 47.619 84 41 2 23 103 4 87 3.56e-22 83.2
MsG0480021349.01.T01 MTR_4g072890 48.837 86 40 2 21 105 8 90 3.74e-22 83.2
MsG0480021349.01.T01 MTR_4g072330 56.061 66 28 1 41 105 22 87 4.88e-22 82.8
MsG0480021349.01.T01 MTR_8g461410 55.385 65 28 1 40 103 23 87 4.94e-22 82.8
MsG0480021349.01.T01 MTR_4g072540 56.923 65 27 1 40 103 19 83 5.05e-22 82.8
MsG0480021349.01.T01 MTR_4g072850 58.462 65 26 1 40 103 25 89 5.21e-22 82.8
MsG0480021349.01.T01 MTR_3g084170 58.462 65 26 1 40 103 23 87 5.33e-22 82.8
MsG0480021349.01.T01 MTR_3g084220 58.462 65 26 1 40 103 23 87 6.77e-22 82.4
MsG0480021349.01.T01 MTR_4g072870 45.556 90 44 2 17 105 5 90 8.38e-22 82.4
MsG0480021349.01.T01 MTR_4g072300 56.250 64 27 1 41 103 25 88 9.55e-22 82.0
MsG0480021349.01.T01 MTR_4g072680 56.716 67 28 1 40 105 23 89 1.54e-21 81.6
MsG0480021349.01.T01 MTR_3g110038 56.923 65 27 1 40 103 23 87 1.57e-21 81.6
MsG0480021349.01.T01 MTR_3g117630 58.462 65 26 1 40 103 23 87 2.45e-21 81.3
MsG0480021349.01.T01 MTR_4g072460 56.716 67 28 1 40 105 23 89 2.62e-21 81.3
MsG0480021349.01.T01 MTR_3g084230 58.209 67 27 1 40 105 23 89 2.77e-21 80.9
MsG0480021349.01.T01 MTR_3g084160 56.716 67 28 1 40 105 23 89 3.15e-21 80.9
MsG0480021349.01.T01 MTR_4g072580 56.923 65 27 1 40 103 18 82 3.32e-21 80.5
MsG0480021349.01.T01 MTR_4g072610 55.224 67 29 1 40 105 17 83 3.49e-21 80.5
MsG0480021349.01.T01 MTR_4g072670 55.224 67 29 1 40 105 19 85 3.64e-21 80.5
MsG0480021349.01.T01 MTR_4g072590 53.731 67 30 1 40 105 18 84 4.98e-21 80.1
MsG0480021349.01.T01 MTR_4g072490 46.591 88 36 2 17 103 5 82 7.29e-21 79.7
MsG0480021349.01.T01 MTR_4g072740 46.667 90 37 2 17 105 5 84 9.58e-21 79.3
MsG0480021349.01.T01 MTR_1g063950 50.725 69 34 0 33 101 39 107 1.09e-20 80.5
MsG0480021349.01.T01 MTR_4g072720 53.846 65 29 1 40 103 19 83 1.47e-20 79.0
MsG0480021349.01.T01 MTR_8g461420 56.716 67 28 1 40 105 23 89 1.66e-20 79.0
MsG0480021349.01.T01 MTR_4g050700 57.812 64 26 1 41 103 25 88 1.70e-20 79.0
MsG0480021349.01.T01 MTR_2g012410 57.812 64 26 1 41 103 25 88 1.70e-20 79.0
MsG0480021349.01.T01 MTR_3g110045 60.000 65 25 1 40 103 82 146 1.95e-20 80.5
MsG0480021349.01.T01 MTR_3g084190 55.224 67 29 1 40 105 23 89 2.01e-20 79.0
MsG0480021349.01.T01 MTR_4g072510 53.846 65 29 1 40 103 19 83 2.02e-20 78.6
MsG0480021349.01.T01 MTR_4g072830 55.385 65 28 1 40 103 21 85 2.40e-20 78.6
MsG0480021349.01.T01 MTR_3g110042 55.224 67 29 1 40 105 23 89 2.77e-20 78.6
MsG0480021349.01.T01 MTR_4g072940 54.688 64 28 1 40 102 55 118 2.80e-20 79.3
MsG0480021349.01.T01 MTR_4g072690 55.385 65 28 1 40 103 18 82 4.92e-20 77.8
MsG0480021349.01.T01 MTR_4g072630 52.308 65 30 1 40 103 19 83 6.36e-20 77.4
MsG0480021349.01.T01 MTR_4g072470 46.667 90 37 2 17 105 5 84 6.90e-20 77.4
MsG0480021349.01.T01 MTR_3g084260 56.250 64 27 1 41 103 25 88 7.25e-20 77.4
MsG0480021349.01.T01 MTR_4g072465 53.846 65 29 1 40 103 19 83 7.73e-20 77.0
MsG0480021349.01.T01 MTR_7g101740 48.611 72 37 0 33 104 31 102 1.39e-19 77.4
MsG0480021349.01.T01 MTR_4g072550 57.812 64 26 1 41 103 35 98 1.56e-19 77.0
MsG0480021349.01.T01 MTR_4g072600 53.731 67 30 1 40 105 18 84 1.58e-19 76.3
MsG0480021349.01.T01 MTR_1g024085 44.944 89 47 1 17 105 14 100 1.89e-19 77.8
MsG0480021349.01.T01 MTR_3g110032 54.688 64 28 1 41 103 25 88 1.97e-19 76.3
MsG0480021349.01.T01 MTR_4g072650 52.308 65 30 1 40 103 17 81 3.72e-19 75.5
MsG0480021349.01.T01 MTR_4g072770 55.385 65 28 1 42 105 15 79 7.15e-19 74.7
MsG0480021349.01.T01 MTR_4g072450 53.846 65 29 1 40 103 18 82 9.77e-19 74.3
MsG0480021349.01.T01 MTR_4g072380 46.591 88 37 2 17 103 5 83 2.72e-18 73.2
MsG0480021349.01.T01 MTR_2g043960 52.174 69 33 0 37 105 71 139 4.02e-18 74.7
MsG0480021349.01.T01 MTR_1g094750 44.872 78 40 1 24 101 35 109 6.17e-18 73.2
MsG0480021349.01.T01 MTR_1g061570 40.260 77 46 0 25 101 2 78 1.09e-17 72.8
MsG0480021349.01.T01 MTR_4g124750 42.857 91 48 1 20 106 43 133 2.42e-17 72.8
MsG0480021349.01.T01 MTR_8g461210 36.538 104 58 2 3 106 4 99 6.44e-17 70.5
MsG0480021349.01.T01 MTR_5g008350 51.724 58 27 1 40 96 18 75 6.70e-17 69.3
MsG0480021349.01.T01 MTR_1g009150 49.231 65 33 0 41 105 70 134 1.08e-16 71.6
MsG0480021349.01.T01 MTR_3g109160 40.230 87 49 1 19 105 49 132 1.80e-16 70.9
MsG0480021349.01.T01 MTR_4g072930 55.224 67 25 2 42 103 41 107 3.12e-16 68.6
MsG0480021349.01.T01 MTR_4g072750 58.333 48 20 0 41 88 26 73 4.16e-16 67.8
MsG0480021349.01.T01 MTR_7g118010 41.250 80 39 2 28 105 15 88 1.21e-15 67.0
MsG0480021349.01.T01 MTR_3g110035 57.143 56 23 1 51 105 80 135 1.79e-15 67.4
MsG0480021349.01.T01 MTR_3g092220 40.260 77 44 1 31 105 22 98 1.91e-15 66.6
MsG0480021349.01.T01 MTR_7g104950 45.902 61 33 0 45 105 53 113 2.37e-15 67.0
MsG0480021349.01.T01 MTR_4g025830 44.776 67 34 1 42 105 79 145 2.94e-15 67.4
MsG0480021349.01.T01 MTR_1g059770 39.189 74 45 0 33 106 40 113 3.27e-15 66.6
MsG0480021349.01.T01 MTR_7g104940 45.902 61 33 0 45 105 53 113 4.15e-15 66.2
MsG0480021349.01.T01 MTR_4g072290 55.769 52 22 1 55 105 25 76 4.22e-15 65.1
MsG0480021349.01.T01 MTR_2g095430 43.478 69 35 1 30 94 33 101 7.44e-15 65.9
MsG0480021349.01.T01 MTR_3g084200 54.348 46 21 0 40 85 23 68 8.87e-15 64.7
MsG0480021349.01.T01 MTR_4g072160 37.113 97 54 1 9 105 11 100 1.08e-14 65.5
MsG0480021349.01.T01 MTR_0388s0020 43.478 69 36 1 40 105 73 141 1.80e-14 65.1
MsG0480021349.01.T01 MTR_4g005320 43.750 64 36 0 42 105 70 133 1.89e-14 65.5
MsG0480021349.01.T01 MTR_4g057800 42.697 89 44 3 10 94 9 94 3.08e-14 64.3
MsG0480021349.01.T01 MTR_4g057810 40.659 91 50 3 13 101 11 99 1.24e-13 62.4
MsG0480021349.01.T01 MTR_4g072280 55.814 43 19 0 41 83 25 67 3.34e-13 60.1
MsG0480021349.01.T01 MTR_8g026730 42.424 66 36 1 42 105 27 92 3.66e-13 60.8
MsG0480021349.01.T01 MTR_2g066830 35.385 65 42 0 42 106 58 122 3.10e-12 59.3
MsG0480021349.01.T01 MTR_4g021810 43.077 65 36 1 42 105 26 90 6.84e-12 57.4
MsG0480021349.01.T01 MTR_3g098970 42.105 57 33 0 42 98 53 109 1.23e-11 57.8
MsG0480021349.01.T01 MTR_7g101920 46.429 56 28 1 41 94 34 89 2.02e-11 56.2
MsG0480021349.01.T01 MTR_4g005310 43.548 62 33 1 42 101 62 123 5.54e-11 56.2
MsG0480021349.01.T01 MTR_8g101520 35.294 102 58 1 1 94 1 102 7.66e-11 55.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021349.01.T01 AT4G34760 83.333 108 15 2 1 106 1 107 4.02e-61 182
MsG0480021349.01.T01 AT2G21220 78.095 105 21 1 1 105 1 103 9.06e-57 171
MsG0480021349.01.T01 AT4G38860 78.505 107 20 2 1 106 1 105 2.35e-55 167
MsG0480021349.01.T01 AT2G16580 75.229 109 23 2 1 106 1 108 6.35e-55 166
MsG0480021349.01.T01 AT1G75580 76.190 105 21 2 6 106 4 108 1.50e-53 163
MsG0480021349.01.T01 AT1G19830 66.087 115 28 3 1 106 1 113 2.02e-48 150
MsG0480021349.01.T01 AT4G36110 70.755 106 29 1 1 106 1 104 8.83e-48 148
MsG0480021349.01.T01 AT2G18010 64.286 112 34 1 1 106 1 112 8.76e-46 143
MsG0480021349.01.T01 AT5G66260 66.292 89 28 1 17 105 11 97 3.11e-35 116
MsG0480021349.01.T01 AT2G21210 48.889 90 41 3 17 103 5 92 2.02e-24 89.4
MsG0480021349.01.T01 AT4G34770 61.765 68 23 2 41 105 34 101 5.96e-24 88.2
MsG0480021349.01.T01 AT2G21210 48.889 90 41 3 17 103 72 159 7.90e-24 89.7
MsG0480021349.01.T01 AT4G38840 64.615 65 21 2 41 103 32 96 1.45e-23 87.0
MsG0480021349.01.T01 AT4G13790 55.714 70 28 2 40 106 23 92 1.44e-22 84.3
MsG0480021349.01.T01 AT3G51200 48.387 93 40 3 15 105 17 103 1.47e-22 84.7
MsG0480021349.01.T01 AT4G34810 52.747 91 36 4 18 103 26 114 1.65e-22 85.1
MsG0480021349.01.T01 AT5G18080 47.253 91 35 3 18 106 11 90 2.23e-21 81.3
MsG0480021349.01.T01 AT4G34800 60.938 64 21 2 42 101 21 84 2.28e-21 81.3
MsG0480021349.01.T01 AT4G38825 48.148 81 40 2 27 105 8 88 2.95e-21 80.9
MsG0480021349.01.T01 AT4G38850 47.312 93 31 3 18 106 11 89 3.79e-21 80.5
MsG0480021349.01.T01 AT2G21200 58.209 67 26 2 41 105 20 86 4.30e-21 80.5
MsG0480021349.01.T01 AT5G18030 56.716 67 27 2 42 106 22 88 4.35e-21 80.5
MsG0480021349.01.T01 AT4G34780 54.930 71 28 2 40 106 26 96 6.96e-21 80.5
MsG0480021349.01.T01 AT5G18020 60.938 64 23 2 42 103 24 87 7.37e-21 80.1
MsG0480021349.01.T01 AT5G18010 46.154 91 36 3 18 106 11 90 1.09e-20 79.3
MsG0480021349.01.T01 AT5G18050 55.224 67 28 2 42 106 24 90 1.34e-20 79.3
MsG0480021349.01.T01 AT3G03830 57.971 69 25 2 42 106 24 92 1.57e-20 79.3
MsG0480021349.01.T01 AT5G18060 58.462 65 25 2 43 105 25 89 1.74e-20 79.0
MsG0480021349.01.T01 AT3G43120 46.512 86 45 1 21 106 59 143 1.11e-19 79.0
MsG0480021349.01.T01 AT3G03820 54.286 70 28 2 41 106 26 95 2.12e-19 76.3
MsG0480021349.01.T01 AT3G03840 55.072 69 28 2 41 106 26 94 2.96e-19 75.9
MsG0480021349.01.T01 AT3G20220 49.180 61 30 1 42 101 47 107 4.56e-19 76.3
MsG0480021349.01.T01 AT1G75590 40.659 91 54 0 9 99 9 99 6.50e-19 76.6
MsG0480021349.01.T01 AT2G37030 52.459 61 29 0 38 98 45 105 1.41e-18 75.1
MsG0480021349.01.T01 AT5G20810 53.846 65 30 0 37 101 74 138 1.50e-18 76.3
MsG0480021349.01.T01 AT4G34790 56.923 65 25 2 42 103 39 103 2.94e-18 73.9
MsG0480021349.01.T01 AT4G34750 39.604 101 54 2 8 105 4 100 3.12e-18 75.1
MsG0480021349.01.T01 AT4G34750 39.604 101 54 2 8 105 4 100 3.12e-18 75.1
MsG0480021349.01.T01 AT5G20810 53.846 65 30 0 37 101 74 138 4.00e-18 75.5
MsG0480021349.01.T01 AT3G03850 55.224 67 27 2 43 106 26 92 6.53e-18 72.4
MsG0480021349.01.T01 AT1G19840 41.573 89 51 1 17 105 17 104 4.52e-17 72.0
MsG0480021349.01.T01 AT5G10990 40.964 83 48 1 17 99 17 98 8.05e-17 71.2
MsG0480021349.01.T01 AT3G60690 46.575 73 36 1 36 105 82 154 1.02e-15 68.9
MsG0480021349.01.T01 AT1G56150 31.373 102 58 1 17 106 1 102 1.96e-15 66.6
MsG0480021349.01.T01 AT2G28085 47.059 68 32 1 31 94 44 111 2.18e-15 67.0
MsG0480021349.01.T01 AT4G31320 45.312 64 35 0 42 105 80 143 2.63e-15 68.2
MsG0480021349.01.T01 AT3G61900 45.588 68 34 1 41 105 29 96 3.10e-15 67.0
MsG0480021349.01.T01 AT2G45210 41.892 74 40 1 35 105 72 145 5.47e-15 67.0
MsG0480021349.01.T01 AT2G24400 46.875 64 34 0 42 105 64 127 5.57e-15 67.0
MsG0480021349.01.T01 AT3G53250 42.466 73 37 2 26 98 38 105 5.67e-14 63.2
MsG0480021349.01.T01 AT3G53250 37.500 96 55 2 3 98 46 136 1.03e-13 63.5
MsG0480021349.01.T01 AT3G12830 40.000 65 39 0 42 106 50 114 1.47e-13 62.4
MsG0480021349.01.T01 AT2G46690 42.647 68 36 1 41 105 23 90 1.77e-13 62.0
MsG0480021349.01.T01 AT1G16510 40.000 65 39 0 42 106 54 118 4.33e-13 61.6
MsG0480021349.01.T01 AT5G53590 44.286 70 34 1 41 105 45 114 4.70e-13 61.2
MsG0480021349.01.T01 AT1G79130 40.000 65 39 0 42 106 48 112 6.67e-13 60.8
MsG0480021349.01.T01 AT2G36210 38.961 77 45 2 31 105 42 118 1.54e-12 59.7
MsG0480021349.01.T01 AT4G09530 43.750 64 32 2 42 101 28 91 3.33e-12 58.2
MsG0480021349.01.T01 AT4G00880 42.424 66 36 1 42 105 28 93 6.10e-12 58.2
MsG0480021349.01.T01 AT1G76190 39.683 63 37 1 44 106 23 84 8.06e-12 57.8
MsG0480021349.01.T01 AT4G12410 41.791 67 36 1 42 105 76 142 8.63e-11 55.8
MsG0480021349.01.T01 AT1G20470 42.857 63 35 1 44 106 25 86 9.80e-11 55.5

Find 9 sgRNAs with CRISPR-Local

Find 19 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTCAAGCTGAAGAAGAATT+TGG 0.180585 4:+56924728 MsG0480021349.01.T01:CDS
GTTGGAGTATTTCTTGATAA+TGG 0.303731 4:-56924510 None:intergenic
TAGACAGGAAAATGACCTTT+TGG 0.421755 4:-56924632 None:intergenic
CTCAAAAGATGTTCAAGCTT+AGG 0.460632 4:+56924566 MsG0480021349.01.T01:CDS
TGATGATAATGAACTACCTA+TGG 0.494980 4:+56924604 MsG0480021349.01.T01:CDS
CGAAGTAGTGATTGAAACTC+AGG 0.507028 4:-56924707 None:intergenic
CTACCTATGGATGTTCCAAA+AGG 0.526934 4:+56924617 MsG0480021349.01.T01:CDS
TTGGAACAATATATCTACTA+CGG 0.543081 4:-56924667 None:intergenic
CTTCTTGACAAGGAATAGTG+AGG 0.705041 4:-56924769 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! GGATGAGTTAAAAAAGATAT+TGG - Chr4:56924689-56924708 None:intergenic 25.0%
! TTGGAACAATATATCTACTA+CGG - Chr4:56924670-56924689 None:intergenic 25.0%
!!! ATTTGGTTTTGATCATGATA+TGG + Chr4:56924745-56924764 MsG0480021349.01.T01:CDS 25.0%
!!! TTTGGTTTTGATCATGATAT+GGG + Chr4:56924746-56924765 MsG0480021349.01.T01:CDS 25.0%
TGAAAAACAACTTCTTGACA+AGG - Chr4:56924782-56924801 None:intergenic 30.0%
! GTTGGAGTATTTCTTGATAA+TGG - Chr4:56924513-56924532 None:intergenic 30.0%
! TGATGATAATGAACTACCTA+TGG + Chr4:56924604-56924623 MsG0480021349.01.T01:CDS 30.0%
! TGTTTCAAAACTGCATTTTG+AGG - Chr4:56924542-56924561 None:intergenic 30.0%
CTCAAAAGATGTTCAAGCTT+AGG + Chr4:56924566-56924585 MsG0480021349.01.T01:CDS 35.0%
! CTAAGCTTGAACATCTTTTG+AGG - Chr4:56924568-56924587 None:intergenic 35.0%
! TAGACAGGAAAATGACCTTT+TGG - Chr4:56924635-56924654 None:intergenic 35.0%
!!! TGCATTTTGAGGTAGTTTGT+TGG - Chr4:56924531-56924550 None:intergenic 35.0%
CGAAGTAGTGATTGAAACTC+AGG - Chr4:56924710-56924729 None:intergenic 40.0%
CGTCAAGCTGAAGAAGAATT+TGG + Chr4:56924728-56924747 MsG0480021349.01.T01:CDS 40.0%
CTACCTATGGATGTTCCAAA+AGG + Chr4:56924617-56924636 MsG0480021349.01.T01:CDS 40.0%
CTTCTTGACAAGGAATAGTG+AGG - Chr4:56924772-56924791 None:intergenic 40.0%
!!! TGACCTTTTGGAACATCCAT+AGG - Chr4:56924623-56924642 None:intergenic 40.0%
!! GGTCATTTTCCTGTCTACGT+AGG + Chr4:56924638-56924657 MsG0480021349.01.T01:CDS 45.0%
! CGGTTTTCACCTACGTAGAC+AGG - Chr4:56924650-56924669 None:intergenic 50.0%
Chromosome Type Strat End Strand Name
Chr4 gene 56924506 56924826 56924506 ID=MsG0480021349.01;Name=MsG0480021349.01
Chr4 mRNA 56924506 56924826 56924506 ID=MsG0480021349.01.T01;Parent=MsG0480021349.01;Name=MsG0480021349.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|106
Chr4 exon 56924506 56924826 56924506 ID=MsG0480021349.01.T01:exon:1354;Parent=MsG0480021349.01.T01
Chr4 CDS 56924506 56924826 56924506 ID=MsG0480021349.01.T01:cds;Parent=MsG0480021349.01.T01
Gene Sequence

>MsG0480021349.01.T01

ATGGCCATTATCAAGAAATACTCCAACAAACTACCTCAAAATGCAGTTTTGAAACAAATCCTCAAAAGATGTTCAAGCTTAGGAAAGAAAAATGAGTATGATGATAATGAACTACCTATGGATGTTCCAAAAGGTCATTTTCCTGTCTACGTAGGTGAAAACCGTAGTAGATATATTGTTCCAATATCTTTTTTAACTCATCCTGAGTTTCAATCACTACTTCGTCAAGCTGAAGAAGAATTTGGTTTTGATCATGATATGGGCCTCACTATTCCTTGTCAAGAAGTTGTTTTTCAATCTCTAACATCAATGATTAGATGA

Protein sequence

>MsG0480021349.01.T01

MAIIKKYSNKLPQNAVLKQILKRCSSLGKKNEYDDNELPMDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLRQAEEEFGFDHDMGLTIPCQEVVFQSLTSMIR*