AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680032683.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680032683.01.T01 MTR_6g047550 76.214 206 26 5 44 229 22 224 7.30e-99 289
MsG0680032683.01.T01 MTR_6g047570 76.796 181 16 3 44 212 22 188 2.19e-87 262
MsG0680032683.01.T01 MTR_0011s0260 56.633 196 53 5 44 212 22 212 5.04e-53 175
MsG0680032683.01.T01 MTR_0011s0210 56.633 196 53 5 44 212 22 212 7.36e-53 174
MsG0680032683.01.T01 MTR_4g066380 52.973 185 47 5 44 212 22 182 7.08e-47 158
MsG0680032683.01.T01 MTR_4g067010 54.348 184 39 7 44 212 23 176 2.73e-46 157
MsG0680032683.01.T01 MTR_4g066460 49.495 198 35 5 44 212 23 184 1.77e-45 154
MsG0680032683.01.T01 MTR_0246s0020 45.532 235 71 5 44 229 23 249 5.19e-41 144
MsG0680032683.01.T01 MTR_0246s0020 45.532 235 71 5 44 229 23 249 5.27e-41 144
MsG0680032683.01.T01 MTR_0246s0050 48.241 199 81 9 50 229 7 202 1.67e-40 141
MsG0680032683.01.T01 MTR_4g098035 48.241 199 81 9 50 229 28 223 3.07e-40 141
MsG0680032683.01.T01 MTR_0250s0040 46.512 172 33 5 45 212 1 117 3.99e-31 115
MsG0680032683.01.T01 MTR_5g014560 34.694 196 66 9 47 229 36 182 2.54e-15 73.9
MsG0680032683.01.T01 MTR_5g014520 32.990 194 98 8 47 229 36 208 1.34e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 50 sgRNAs with CRISPR-Local

Find 336 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATTAGTAGTGGGTAAATT+TGG 0.123311 6:-47584153 None:intergenic
ATCAAGTTATGAAACAAATT+TGG 0.207098 6:+47583981 MsG0680032683.01.T01:CDS
AATTAGTAGTGGGTAAATTT+GGG 0.243914 6:-47584152 None:intergenic
TCAGTTTCAAATTCCATCTT+TGG 0.246525 6:+47584122 MsG0680032683.01.T01:CDS
TCTTGTTCCTAACCTTAAAA+AGG 0.274757 6:+47584302 MsG0680032683.01.T01:CDS
CTTGATTCCTATGGGTTTGA+TGG 0.279343 6:+47580024 MsG0680032683.01.T01:CDS
CTGCAAGGGCAATGAAGTTC+TGG 0.289671 6:-47584278 None:intergenic
ATGGCAACTCTTGATTCCTA+TGG 0.374404 6:+47580015 MsG0680032683.01.T01:CDS
TACTAATTCCTCACAAAACT+TGG 0.378617 6:+47584167 MsG0680032683.01.T01:CDS
GATGGTGATGAAGAAAGTTT+TGG 0.390876 6:-47584087 None:intergenic
AAACAACAATGTTTCACTTC+GGG 0.411590 6:+47583931 MsG0680032683.01.T01:CDS
GACGCAACTCTTGTTTCCTA+TGG 0.417562 6:+47580066 MsG0680032683.01.T01:CDS
TATGTCATCATAACATGAAC+AGG 0.426215 6:+47585136 MsG0680032683.01.T01:exon
TTTGGGGTGTTGTCCAAAGA+TGG 0.435801 6:-47584135 None:intergenic
TCAAATCATGGCTGAGAGAA+AGG 0.441475 6:+47584239 MsG0680032683.01.T01:CDS
TGCAAGGGCAATGAAGTTCT+GGG 0.487137 6:-47584277 None:intergenic
GATGCAACTCTTGTTTCCTA+TGG 0.489183 6:+47579987 None:intergenic
TGGCAACTCTTGATTCCTAT+GGG 0.489514 6:+47580016 MsG0680032683.01.T01:CDS
AACTGAAAAGATGATTTAGA+TGG 0.501895 6:-47584105 None:intergenic
CTTGTTTCCTATGGTTTCGA+TGG 0.512867 6:+47579996 MsG0680032683.01.T01:CDS
CAAACAACAATGTTTCACTT+CGG 0.515112 6:+47583930 MsG0680032683.01.T01:CDS
ACGCAACTCTTGTTTCCTAT+GGG 0.520870 6:+47580067 MsG0680032683.01.T01:CDS
CAAATCATGGCTGAGAGAAA+GGG 0.522006 6:+47584240 MsG0680032683.01.T01:CDS
GTTAGGAACAAGAGCTGCAA+GGG 0.522046 6:-47584292 None:intergenic
CGAACATAATTTATTTGCTG+AGG 0.529435 6:+47583828 MsG0680032683.01.T01:CDS
GAATTACCTGCATAATCTGC+AGG 0.535015 6:-47580101 None:intergenic
ACTCTACCACATCTGTATCA+AGG 0.544071 6:-47583867 None:intergenic
AAAAGGTCTCGTACTCATCA+TGG 0.546528 6:+47584210 MsG0680032683.01.T01:CDS
AGGTTACAACATGAGCATAA+AGG 0.548654 6:+47585076 MsG0680032683.01.T01:CDS
CTTGTTTCCTATGGGTCCGA+TGG 0.554901 6:+47580075 MsG0680032683.01.T01:CDS
TGGTCACCTGCAGATTATGC+AGG 0.565633 6:+47580095 MsG0680032683.01.T01:CDS
TGATGAGTTACTAAGAGATG+TGG 0.574471 6:-47583962 None:intergenic
TCATGGTCAAGATCAAATCA+TGG 0.576297 6:+47584227 MsG0680032683.01.T01:CDS
CAGGTGACCATCGGACCCAT+AGG 0.581573 6:-47580082 None:intergenic
CATAATCTGCAGGTGACCAT+CGG 0.588112 6:-47580091 None:intergenic
GAGTTTCTCTCACATGACAT+AGG 0.592458 6:+47583886 MsG0680032683.01.T01:CDS
ATTAGTAGTGGGTAAATTTG+GGG 0.593344 6:-47584151 None:intergenic
AACAACAATGTTTCACTTCG+GGG 0.595287 6:+47583932 MsG0680032683.01.T01:CDS
AGAGTTGCCATCGAAACCAT+AGG 0.599265 6:-47580003 None:intergenic
ACTTCAATGCTGCCATGCGT+AGG 0.601033 6:-47585112 None:intergenic
GGAAACAAGAGTTGCGTCGG+TGG 0.604261 6:-47580061 None:intergenic
ATAGGAAACAAGAGTTGCAT+CGG 0.604650 6:-47579985 None:intergenic
GGTTAGGAACAAGAGCTGCA+AGG 0.614039 6:-47584293 None:intergenic
GATGAGTTACTAAGAGATGT+GGG 0.618639 6:-47583961 None:intergenic
GAATTTCCTTGATACAGATG+TGG 0.636353 6:+47583861 MsG0680032683.01.T01:CDS
GTTACTAAGAGATGTGGGAG+TGG 0.643033 6:-47583956 None:intergenic
ATAGGAAACAAGAGTTGCGT+CGG 0.652186 6:-47580064 None:intergenic
GAAACAAGAGTTGCGTCGGT+GGG 0.654991 6:-47580060 None:intergenic
ACTTGTGAAGAACCTACGCA+TGG 0.684270 6:+47585100 MsG0680032683.01.T01:CDS
GTCGTGACCATCAAACCCAT+AGG 0.685866 6:-47580031 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAATTAATTTAATCTG+AGG - Chr6:47581186-47581205 None:intergenic 10.0%
!! GTAATTAATTAAAGTTATAA+AGG - Chr6:47582255-47582274 None:intergenic 10.0%
!! TCAATAAAAATTGATATATT+TGG - Chr6:47582514-47582533 None:intergenic 10.0%
!! TTCTTAAAAAAAAAATATTC+AGG - Chr6:47581799-47581818 None:intergenic 10.0%
!! TTTACAAATTCATTTAATAA+CGG + Chr6:47582594-47582613 MsG0680032683.01.T01:intron 10.0%
!!! AATCTTAATTATTTTATAGT+TGG + Chr6:47585049-47585068 MsG0680032683.01.T01:intron 10.0%
!!! ATCTTAATTATTTTATAGTT+GGG + Chr6:47585050-47585069 MsG0680032683.01.T01:intron 10.0%
!!! ATTTTTAAGTATTTAAAGTT+TGG - Chr6:47581486-47581505 None:intergenic 10.0%
!!! GAAAAATTATTTCTTTAAAA+AGG + Chr6:47583476-47583495 MsG0680032683.01.T01:intron 10.0%
!!! TTTATTTTTATTTTTTTGAG+GGG - Chr6:47582913-47582932 None:intergenic 10.0%
!! AAAATGTTAATTAAGTAAAG+AGG + Chr6:47582714-47582733 MsG0680032683.01.T01:intron 15.0%
!! CATAAAAGAAAATTAGTAAA+TGG - Chr6:47580765-47580784 None:intergenic 15.0%
!! TACTACTATATCATTAAAAA+AGG - Chr6:47582809-47582828 None:intergenic 15.0%
!! TATTAAGAAAAATGTATTGA+AGG - Chr6:47582374-47582393 None:intergenic 15.0%
!! TTTATAATGAAAAACATTTG+TGG - Chr6:47583396-47583415 None:intergenic 15.0%
!!! AAAATTATTTTCTCTTGAAA+TGG + Chr6:47581678-47581697 MsG0680032683.01.T01:intron 15.0%
!!! AAATTATTTTCTCTTGAAAT+GGG + Chr6:47581679-47581698 MsG0680032683.01.T01:intron 15.0%
!!! AACTTTAAATAGTAAGTTTT+TGG - Chr6:47583502-47583521 None:intergenic 15.0%
!!! AATTTACTATTTAAAGTAGA+TGG - Chr6:47580151-47580170 None:intergenic 15.0%
!!! ATATATATTTTTTTTTGTGC+TGG + Chr6:47581148-47581167 MsG0680032683.01.T01:intron 15.0%
!!! CTTTTTTTTTCTTTTTCAAA+TGG - Chr6:47582150-47582169 None:intergenic 15.0%
!!! GCTATAGTTTTTTTTTTTTT+AGG + Chr6:47580508-47580527 MsG0680032683.01.T01:intron 15.0%
!!! TATAAGAAGTATTTTATTCT+AGG + Chr6:47584932-47584951 MsG0680032683.01.T01:intron 15.0%
!!! TATATATATTTTTTTTGTGG+TGG + Chr6:47581316-47581335 MsG0680032683.01.T01:intron 15.0%
!!! TGTCACAATTTTTAAATTTT+TGG + Chr6:47584841-47584860 MsG0680032683.01.T01:intron 15.0%
!!! TTCTTTTTATGAAATAATCT+CGG + Chr6:47584348-47584367 MsG0680032683.01.T01:intron 15.0%
!! AAAAATGCATAATATATGCA+AGG - Chr6:47581361-47581380 None:intergenic 20.0%
!! AAATGAATTTGTAAAAGCAA+CGG - Chr6:47582589-47582608 None:intergenic 20.0%
!! AATTGAAATGCTATTGAATT+AGG - Chr6:47581862-47581881 None:intergenic 20.0%
!! ACCACAAAAAAAAGTTATAA+AGG - Chr6:47582229-47582248 None:intergenic 20.0%
!! ATTTATCATCTAATCAATCA+AGG + Chr6:47581068-47581087 MsG0680032683.01.T01:intron 20.0%
!! ATTTCCTGAAGAAAAAAAAA+AGG - Chr6:47583805-47583824 None:intergenic 20.0%
!! CCACAAAAAAAAGTTATAAA+GGG - Chr6:47582228-47582247 None:intergenic 20.0%
!! TAATTAACCATTTGTGTATT+TGG + Chr6:47580712-47580731 MsG0680032683.01.T01:intron 20.0%
!! TTATTTATAGATGAATGCAA+TGG + Chr6:47581031-47581050 MsG0680032683.01.T01:intron 20.0%
!!! AAACATGCTATATTTTTGTT+AGG - Chr6:47582863-47582882 None:intergenic 20.0%
!!! AACATGCTATATTTTTGTTA+GGG - Chr6:47582862-47582881 None:intergenic 20.0%
!!! AATCATTAATGAGTACTTTT+AGG - Chr6:47583450-47583469 None:intergenic 20.0%
!!! ATTTTGTTGTCTTTTGATTT+TGG + Chr6:47584986-47585005 MsG0680032683.01.T01:intron 20.0%
!!! ATTTTTTTAAGCTCCATATT+TGG - Chr6:47584033-47584052 None:intergenic 20.0%
!!! CACAATTTTTAAATTTTTGG+TGG + Chr6:47584844-47584863 MsG0680032683.01.T01:intron 20.0%
!!! TAGGAAAATATATGTTGATT+CGG + Chr6:47584636-47584655 MsG0680032683.01.T01:intron 20.0%
!!! TGTCGAAATTATTTTGATTT+GGG - Chr6:47580933-47580952 None:intergenic 20.0%
!!! TTAAAAAGCGTTTGAAATTT+TGG + Chr6:47584472-47584491 MsG0680032683.01.T01:intron 20.0%
!!! TTGTCGAAATTATTTTGATT+TGG - Chr6:47580934-47580953 None:intergenic 20.0%
!!! TTTGAGATTAATTATTAGCA+GGG - Chr6:47580590-47580609 None:intergenic 20.0%
!!! TTTTCCTTTTTTTTTTCTTC+AGG + Chr6:47583798-47583817 MsG0680032683.01.T01:intron 20.0%
!!! TTTTTTTTTTCTTCAGGAAA+TGG + Chr6:47583804-47583823 MsG0680032683.01.T01:intron 20.0%
! AAACAGTCTTAAAAAGTTAG+GGG + Chr6:47580607-47580626 MsG0680032683.01.T01:intron 25.0%
! AAATGTTAGTGGCAATTTAA+AGG - Chr6:47584816-47584835 None:intergenic 25.0%
! AACTGAAAAGATGATTTAGA+TGG - Chr6:47584108-47584127 None:intergenic 25.0%
! AAGGAAAATTGATAAGCAAA+TGG - Chr6:47582790-47582809 None:intergenic 25.0%
! CAAACAGTCTTAAAAAGTTA+GGG + Chr6:47580606-47580625 MsG0680032683.01.T01:intron 25.0%
! CTAAAACAAGACAACATAAA+AGG + Chr6:47580446-47580465 MsG0680032683.01.T01:intron 25.0%
! GCTGAATGATAATAGAAATA+AGG - Chr6:47581512-47581531 None:intergenic 25.0%
! GTGACAAAAAAAAATGTTAG+TGG - Chr6:47584827-47584846 None:intergenic 25.0%
! TATGTTGAGTCTAATAATCA+TGG + Chr6:47580178-47580197 MsG0680032683.01.T01:intron 25.0%
! TCAAACAGTCTTAAAAAGTT+AGG + Chr6:47580605-47580624 MsG0680032683.01.T01:intron 25.0%
! TCACTTTACATTTATGATAG+TGG + Chr6:47582301-47582320 MsG0680032683.01.T01:intron 25.0%
! TCCTATAAAAGATCTAACAA+TGG + Chr6:47582987-47583006 MsG0680032683.01.T01:intron 25.0%
! TCTAGTTAAAATTATGGTTG+AGG + Chr6:47584685-47584704 MsG0680032683.01.T01:intron 25.0%
! TGTGGAGTATATTATAATTC+AGG + Chr6:47582622-47582641 MsG0680032683.01.T01:intron 25.0%
! TTATAGAGAAATCCTTTAAC+TGG - Chr6:47580695-47580714 None:intergenic 25.0%
! TTCATGTAAAAAAAACTGAG+TGG - Chr6:47581972-47581991 None:intergenic 25.0%
!! AAACAAAATTTGTTTGTGCT+CGG - Chr6:47581445-47581464 None:intergenic 25.0%
!! AAGTTTTCCAAATACACAAA+TGG - Chr6:47580722-47580741 None:intergenic 25.0%
!! AGGACTTCTAGTTAAAATTA+TGG + Chr6:47584679-47584698 MsG0680032683.01.T01:intron 25.0%
!! ATTTAAAACAAGAAAGAGCA+AGG - Chr6:47583043-47583062 None:intergenic 25.0%
!! GTTTGAGATTAATTATTAGC+AGG - Chr6:47580591-47580610 None:intergenic 25.0%
!! TAAGTGCATTTGTTAAGTAT+TGG - Chr6:47582335-47582354 None:intergenic 25.0%
!! TAGCATTTCTCATTCTTTTA+AGG + Chr6:47583553-47583572 MsG0680032683.01.T01:intron 25.0%
!! TCACTTATTGTACCTTTTTA+AGG - Chr6:47584317-47584336 None:intergenic 25.0%
!! TCCATTGTTAGATCTTTTAT+AGG - Chr6:47582991-47583010 None:intergenic 25.0%
!! TTTAAAGTTTGGTTAGCTAT+TGG - Chr6:47581475-47581494 None:intergenic 25.0%
!!! AATTAGTAGTGGGTAAATTT+GGG - Chr6:47584155-47584174 None:intergenic 25.0%
!!! ACATGCTATATTTTTGTTAG+GGG - Chr6:47582861-47582880 None:intergenic 25.0%
!!! ACCTTATCTTTTTTCAATAC+GGG + Chr6:47580656-47580675 MsG0680032683.01.T01:intron 25.0%
!!! ATATTTTTTTTTGTGCTGGT+CGG + Chr6:47581152-47581171 MsG0680032683.01.T01:intron 25.0%
!!! ATTATTTTATAGTTGGGTGA+AGG + Chr6:47585056-47585075 MsG0680032683.01.T01:intron 25.0%
!!! ATTGTTGTTTGTTTTGTTCT+TGG - Chr6:47583921-47583940 None:intergenic 25.0%
!!! CACCTTATCTTTTTTCAATA+CGG + Chr6:47580655-47580674 MsG0680032683.01.T01:intron 25.0%
!!! CATTTAATAACGGATATATG+TGG + Chr6:47582604-47582623 MsG0680032683.01.T01:intron 25.0%
!!! CCCTTTATAACTTTTTTTTG+TGG + Chr6:47582225-47582244 MsG0680032683.01.T01:intron 25.0%
!!! CTTGAATTTTTTCCAGTTAA+AGG + Chr6:47580680-47580699 MsG0680032683.01.T01:intron 25.0%
!!! CTTTTATGTTGTCTTGTTTT+AGG - Chr6:47580448-47580467 None:intergenic 25.0%
!!! TATATTTTTTTTGTGGTGGT+CGG + Chr6:47581320-47581339 MsG0680032683.01.T01:intron 25.0%
!!! TATTGTACCTTTTTAAGGTT+AGG - Chr6:47584312-47584331 None:intergenic 25.0%
!!! TGATTTTGATAAGCCAAATA+TGG + Chr6:47584017-47584036 MsG0680032683.01.T01:CDS 25.0%
AAACAACAATGTTTCACTTC+GGG + Chr6:47583931-47583950 MsG0680032683.01.T01:CDS 30.0%
AAATCACTACTGTATACATG+AGG + Chr6:47580353-47580372 MsG0680032683.01.T01:intron 30.0%
AAATTATGGTTGAGGTTCAA+AGG + Chr6:47584693-47584712 MsG0680032683.01.T01:intron 30.0%
AAGACAACATAAAAGGAAAG+TGG + Chr6:47580453-47580472 MsG0680032683.01.T01:intron 30.0%
AATAATAGTGTCTTACCCTT+TGG + Chr6:47584734-47584753 MsG0680032683.01.T01:intron 30.0%
AGATTAATTATTAGCAGGGT+TGG - Chr6:47580586-47580605 None:intergenic 30.0%
ATGCAATGGTACTTTGAATA+TGG + Chr6:47581045-47581064 MsG0680032683.01.T01:intron 30.0%
CAAACAACAATGTTTCACTT+CGG + Chr6:47583930-47583949 MsG0680032683.01.T01:CDS 30.0%
CCAAAAATAGTACACCATTA+AGG - Chr6:47585209-47585228 None:intergenic 30.0%
CCTATTAAGCATTAGAGTAT+CGG + Chr6:47582027-47582046 MsG0680032683.01.T01:intron 30.0%
CGATTGCGTAAAAATATGTT+AGG + Chr6:47584401-47584420 MsG0680032683.01.T01:intron 30.0%
CTATTGAATTAGGTACAGTT+GGG - Chr6:47581852-47581871 None:intergenic 30.0%
GTGTATTTGGAAAACTTGAA+TGG + Chr6:47580725-47580744 MsG0680032683.01.T01:intron 30.0%
TAAACAAAAGTTAGCCAAAG+AGG + Chr6:47582068-47582087 MsG0680032683.01.T01:intron 30.0%
TAATGAAAAGTGAAAGAGCT+CGG - Chr6:47582186-47582205 None:intergenic 30.0%
TACTAATTCCTCACAAAACT+TGG + Chr6:47584167-47584186 MsG0680032683.01.T01:CDS 30.0%
TATGTCATCATAACATGAAC+AGG + Chr6:47585136-47585155 MsG0680032683.01.T01:exon 30.0%
TCAGTTTCAAATTCCATCTT+TGG + Chr6:47584122-47584141 MsG0680032683.01.T01:CDS 30.0%
TCCATTGTCTCATTCAAATT+GGG - Chr6:47583083-47583102 None:intergenic 30.0%
TCCCGTATTGAAAAAAGATA+AGG - Chr6:47580660-47580679 None:intergenic 30.0%
TCTTGTTCCTAACCTTAAAA+AGG + Chr6:47584302-47584321 MsG0680032683.01.T01:CDS 30.0%
TTCCATTGTCTCATTCAAAT+TGG - Chr6:47583084-47583103 None:intergenic 30.0%
TTGCGTAAAAATATGTTAGG+TGG + Chr6:47584404-47584423 MsG0680032683.01.T01:intron 30.0%
TTGGAAACAAAAACCTCAAA+GGG + Chr6:47584186-47584205 MsG0680032683.01.T01:CDS 30.0%
! AACAAAATTTGTTTGTGCTC+GGG - Chr6:47581444-47581463 None:intergenic 30.0%
! AAGAGTTAATCAAGTTGCTT+GGG - Chr6:47583359-47583378 None:intergenic 30.0%
! AATAATCACCTGCTCTAAAT+AGG + Chr6:47581623-47581642 MsG0680032683.01.T01:intron 30.0%
! ACAGTAGTGATTTTCACTTT+TGG - Chr6:47580346-47580365 None:intergenic 30.0%
! ACTAAATTTTAAGCACGTGT+GGG - Chr6:47582968-47582987 None:intergenic 30.0%
! ATAATCACCTGCTCTAAATA+GGG + Chr6:47581624-47581643 MsG0680032683.01.T01:intron 30.0%
! ATTTAGAGCAGGTGATTATT+AGG - Chr6:47581623-47581642 None:intergenic 30.0%
! CCTTAATGGTGTACTATTTT+TGG + Chr6:47585206-47585225 MsG0680032683.01.T01:three_prime_UTR 30.0%
! CGAACATAATTTATTTGCTG+AGG + Chr6:47583828-47583847 MsG0680032683.01.T01:CDS 30.0%
! GTCACAAATGTTTTCCTTAA+TGG + Chr6:47585192-47585211 MsG0680032683.01.T01:three_prime_UTR 30.0%
! TCTAGGATAGAATTTCCAAA+GGG - Chr6:47584752-47584771 None:intergenic 30.0%
! TTTAGAGCAGGTGATTATTA+GGG - Chr6:47581622-47581641 None:intergenic 30.0%
! TTTTGTGAGGAATTAGTAGT+GGG - Chr6:47584165-47584184 None:intergenic 30.0%
! TTTTTGATGAAGAAGCAATG+TGG - Chr6:47581660-47581679 None:intergenic 30.0%
!! ATTAGTAGTGGGTAAATTTG+GGG - Chr6:47584154-47584173 None:intergenic 30.0%
!! CAGTAGTGATTTTCACTTTT+GGG - Chr6:47580345-47580364 None:intergenic 30.0%
!! CTTTGGCTAACTTTTGTTTA+GGG - Chr6:47582068-47582087 None:intergenic 30.0%
!! GAATTAGTAGTGGGTAAATT+TGG - Chr6:47584156-47584175 None:intergenic 30.0%
!! TCTTTGGCTAACTTTTGTTT+AGG - Chr6:47582069-47582088 None:intergenic 30.0%
!! TGAAGAAAGTTTTGGTGAAA+AGG - Chr6:47584082-47584101 None:intergenic 30.0%
!! TGTTGATTTACCATTTCAAG+TGG + Chr6:47584601-47584620 MsG0680032683.01.T01:intron 30.0%
!! TTTTGTTTCCAAGTTTTGTG+AGG - Chr6:47584178-47584197 None:intergenic 30.0%
!!! AGAATTTTTCAAGACACATG+TGG + Chr6:47583607-47583626 MsG0680032683.01.T01:intron 30.0%
!!! ATATTTTTTTTGTGGTGGTC+GGG + Chr6:47581321-47581340 MsG0680032683.01.T01:intron 30.0%
!!! ATGTTAGGTGAGTGTTTTTT+TGG - Chr6:47580396-47580415 None:intergenic 30.0%
!!! TATTTTTTTTTGTGCTGGTC+GGG + Chr6:47581153-47581172 MsG0680032683.01.T01:intron 30.0%
!!! TGTTAGGTGAGTGTTTTTTT+GGG - Chr6:47580395-47580414 None:intergenic 30.0%
AACAACAATGTTTCACTTCG+GGG + Chr6:47583932-47583951 MsG0680032683.01.T01:CDS 35.0%
ACCCAATTTGAATGAGACAA+TGG + Chr6:47583079-47583098 MsG0680032683.01.T01:intron 35.0%
AGGTTACAACATGAGCATAA+AGG + Chr6:47585076-47585095 MsG0680032683.01.T01:CDS 35.0%
ATAAAAGGAAAGTGGAAACC+TGG + Chr6:47580461-47580480 MsG0680032683.01.T01:intron 35.0%
ATATAGCATGTTTCCACTTG+TGG + Chr6:47582870-47582889 MsG0680032683.01.T01:intron 35.0%
ATTATATCGAGCGATCATAG+TGG - Chr6:47584965-47584984 None:intergenic 35.0%
ATTCTGATGAAGAAGCAATG+TGG - Chr6:47581716-47581735 None:intergenic 35.0%
ATTCTTGCTTCCACTTGAAA+TGG - Chr6:47584614-47584633 None:intergenic 35.0%
CAAGAGGACTCAATTCTAAT+AGG + Chr6:47580422-47580441 MsG0680032683.01.T01:intron 35.0%
CATAATATATGCAAGGTCTG+AGG - Chr6:47581354-47581373 None:intergenic 35.0%
CCAAAGAGGATTGATGTATT+AGG + Chr6:47582082-47582101 MsG0680032683.01.T01:intron 35.0%
CCGATACTCTAATGCTTAAT+AGG - Chr6:47582030-47582049 None:intergenic 35.0%
CCTAATACATCAATCCTCTT+TGG - Chr6:47582085-47582104 None:intergenic 35.0%
CTATATCATTTACCCACAAG+TGG - Chr6:47582886-47582905 None:intergenic 35.0%
CTTGGAAACAAAAACCTCAA+AGG + Chr6:47584185-47584204 MsG0680032683.01.T01:CDS 35.0%
GAATTTCCTTGATACAGATG+TGG + Chr6:47583861-47583880 MsG0680032683.01.T01:CDS 35.0%
GATGAGTTACTAAGAGATGT+GGG - Chr6:47583964-47583983 None:intergenic 35.0%
GCTATTGAATTAGGTACAGT+TGG - Chr6:47581853-47581872 None:intergenic 35.0%
GGTCACTGATAGTACAAATA+AGG - Chr6:47581778-47581797 None:intergenic 35.0%
GTAGCTTATAAATACGATCG+AGG - Chr6:47582567-47582586 None:intergenic 35.0%
GTGGGGTATGTATCATTTAT+TGG - Chr6:47582950-47582969 None:intergenic 35.0%
TAAAAGGAAAGTGGAAACCT+GGG + Chr6:47580462-47580481 MsG0680032683.01.T01:intron 35.0%
TATAGCATGTTTCCACTTGT+GGG + Chr6:47582871-47582890 MsG0680032683.01.T01:intron 35.0%
TCAGAAACACGAGTTACAAA+TGG - Chr6:47581541-47581560 None:intergenic 35.0%
TCATGGTCAAGATCAAATCA+TGG + Chr6:47584227-47584246 MsG0680032683.01.T01:CDS 35.0%
TGAATTGAAAATACCCCTAC+CGG - Chr6:47581582-47581601 None:intergenic 35.0%
TGATGAGTTACTAAGAGATG+TGG - Chr6:47583965-47583984 None:intergenic 35.0%
TTCAAATGGCCCAGTTATTA+TGG - Chr6:47582136-47582155 None:intergenic 35.0%
! ATACGTGTGAAATGAGCTTT+TGG + Chr6:47582391-47582410 MsG0680032683.01.T01:intron 35.0%
! CTAAATTTTAAGCACGTGTG+GGG - Chr6:47582967-47582986 None:intergenic 35.0%
! GAAGAGTTAATCAAGTTGCT+TGG - Chr6:47583360-47583379 None:intergenic 35.0%
! GACTAAATTTTAAGCACGTG+TGG - Chr6:47582969-47582988 None:intergenic 35.0%
! GTCTAGGATAGAATTTCCAA+AGG - Chr6:47584753-47584772 None:intergenic 35.0%
! GTTTTGTGAGGAATTAGTAG+TGG - Chr6:47584166-47584185 None:intergenic 35.0%
! TCTTTTACTACCTTACAGTG+TGG + Chr6:47581994-47582013 MsG0680032683.01.T01:intron 35.0%
! TTGTTTAGGGCCAGTTATAA+GGG - Chr6:47582055-47582074 None:intergenic 35.0%
! TTTGTTTAGGGCCAGTTATA+AGG - Chr6:47582056-47582075 None:intergenic 35.0%
!! GATGGTGATGAAGAAAGTTT+TGG - Chr6:47584090-47584109 None:intergenic 35.0%
!!! AGTACTTTTAGGACACTAGT+TGG - Chr6:47583439-47583458 None:intergenic 35.0%
!!! ATTTTGATTTGGGTTGTGCA+TGG - Chr6:47580923-47580942 None:intergenic 35.0%
!!! ATTTTTTTTTGTGCTGGTCG+GGG + Chr6:47581154-47581173 MsG0680032683.01.T01:intron 35.0%
!!! TATTTTTTTTGTGGTGGTCG+GGG + Chr6:47581322-47581341 MsG0680032683.01.T01:intron 35.0%
AAAAGGAAAGTGGAAACCTG+GGG + Chr6:47580463-47580482 MsG0680032683.01.T01:intron 40.0%
AAAAGGTCTCGTACTCATCA+TGG + Chr6:47584210-47584229 MsG0680032683.01.T01:CDS 40.0%
AATTAGGTACAGTTGGGAGT+TGG - Chr6:47581846-47581865 None:intergenic 40.0%
ACTCTACCACATCTGTATCA+AGG - Chr6:47583870-47583889 None:intergenic 40.0%
AGACATTACGATCATTGCTC+AGG + Chr6:47584769-47584788 MsG0680032683.01.T01:intron 40.0%
AGCAAACACTTCATACCTTC+CGG + Chr6:47581560-47581579 MsG0680032683.01.T01:intron 40.0%
AGCAAGGCTAGTACTATTTG+TGG - Chr6:47583027-47583046 None:intergenic 40.0%
ATAGGAAACAAGAGTTGCGT+CGG - Chr6:47580067-47580086 None:intergenic 40.0%
ATGGCAACTCTTGATTCCTA+TGG + Chr6:47580015-47580034 MsG0680032683.01.T01:CDS 40.0%
ATGGCCCAGTTATTATGGAA+CGG - Chr6:47582131-47582150 None:intergenic 40.0%
ATTAGTCGCTCACCTTTGAT+GGG - Chr6:47583229-47583248 None:intergenic 40.0%
ATTTCAATTCCTCCACTGTC+GGG + Chr6:47581873-47581892 MsG0680032683.01.T01:intron 40.0%
CAAAAACCTCAAAGGGCAAA+AGG + Chr6:47584193-47584212 MsG0680032683.01.T01:CDS 40.0%
CAAATCAGATAACCAGCTGT+TGG - Chr6:47583141-47583160 None:intergenic 40.0%
CAAATCATGGCTGAGAGAAA+GGG + Chr6:47584240-47584259 MsG0680032683.01.T01:CDS 40.0%
CAACAGCTGGTTATCTGATT+TGG + Chr6:47583139-47583158 MsG0680032683.01.T01:intron 40.0%
CAAGTGGAAGCAAGAATCTT+AGG + Chr6:47584617-47584636 MsG0680032683.01.T01:intron 40.0%
CACCTAACATCATAAGCAAG+AGG + Chr6:47580406-47580425 MsG0680032683.01.T01:intron 40.0%
CATTTCAATTCCTCCACTGT+CGG + Chr6:47581872-47581891 MsG0680032683.01.T01:intron 40.0%
CCAAGTTATTCCACACTGTA+AGG - Chr6:47582007-47582026 None:intergenic 40.0%
CCTTACAGTGTGGAATAACT+TGG + Chr6:47582004-47582023 MsG0680032683.01.T01:intron 40.0%
CTATTTGCCACAATTCAAGG+AGG - Chr6:47583683-47583702 None:intergenic 40.0%
CTTGATTCCTATGGGTTTGA+TGG + Chr6:47580024-47580043 MsG0680032683.01.T01:CDS 40.0%
CTTGTTTCCTATGGTTTCGA+TGG + Chr6:47579996-47580015 MsG0680032683.01.T01:CDS 40.0%
GAATTACCTGCATAATCTGC+AGG - Chr6:47580104-47580123 None:intergenic 40.0%
GAGCAATGATCGTAATGTCT+AGG - Chr6:47584769-47584788 None:intergenic 40.0%
GAGTTTCTCTCACATGACAT+AGG + Chr6:47583886-47583905 MsG0680032683.01.T01:CDS 40.0%
GCACTATTTGCCACAATTCA+AGG - Chr6:47583686-47583705 None:intergenic 40.0%
GGCAAATAGTGCATTGTGAT+TGG + Chr6:47583694-47583713 MsG0680032683.01.T01:intron 40.0%
GTCCTCTTGCTTATGATGTT+AGG - Chr6:47580411-47580430 None:intergenic 40.0%
TCAAATCATGGCTGAGAGAA+AGG + Chr6:47584239-47584258 MsG0680032683.01.T01:CDS 40.0%
TCAGCTCTGTAAGTGAAAAG+AGG + Chr6:47580223-47580242 MsG0680032683.01.T01:intron 40.0%
TCCTCCGTTCCATAATAACT+GGG + Chr6:47582124-47582143 MsG0680032683.01.T01:intron 40.0%
TGATTTCCCCATCGTGAAAA+GGG + Chr6:47580818-47580837 MsG0680032683.01.T01:intron 40.0%
TGGCAACTCTTGATTCCTAT+GGG + Chr6:47580016-47580035 MsG0680032683.01.T01:CDS 40.0%
TTCCTCCGTTCCATAATAAC+TGG + Chr6:47582123-47582142 MsG0680032683.01.T01:intron 40.0%
TTGATTTCCCCATCGTGAAA+AGG + Chr6:47580817-47580836 MsG0680032683.01.T01:intron 40.0%
TTTAGGCTCATACCTTAGAG+AGG + Chr6:47580525-47580544 MsG0680032683.01.T01:intron 40.0%
! AAACGAACCCTATTTAGAGC+AGG - Chr6:47581634-47581653 None:intergenic 40.0%
! ACGCAACTCTTGTTTCCTAT+GGG + Chr6:47580067-47580086 MsG0680032683.01.T01:CDS 40.0%
! CTAATGAAGCGCTCTTGTTA+GGG - Chr6:47583536-47583555 None:intergenic 40.0%
! GTGAAAGAGCTCGGTTATTT+TGG - Chr6:47582177-47582196 None:intergenic 40.0%
!! AACAGGAGCATGATTTTTGC+TGG + Chr6:47585153-47585172 MsG0680032683.01.T01:three_prime_UTR 40.0%
!!! AAATTTTTGGTGGCATCACG+AGG + Chr6:47584854-47584873 MsG0680032683.01.T01:intron 40.0%
!!! AGGTGAGTGTTTTTTTGGGA+TGG - Chr6:47580391-47580410 None:intergenic 40.0%
!!! TGAGTGTTTTTTTGGGATGG+TGG - Chr6:47580388-47580407 None:intergenic 40.0%
!!! TTTTTTGGGATGGTGGTTTG+AGG - Chr6:47580381-47580400 None:intergenic 40.0%
AACACTTCATACCTTCCGGT+AGG + Chr6:47581564-47581583 MsG0680032683.01.T01:intron 45.0%
AATACCGGATTCGATTCCCA+GGG - Chr6:47583296-47583315 None:intergenic 45.0%
AATCGAATCCGGTATTCCCT+GGG + Chr6:47583300-47583319 MsG0680032683.01.T01:intron 45.0%
AATGCTCTCATGAGATGACG+AGG - Chr6:47584573-47584592 None:intergenic 45.0%
ACACTTCATACCTTCCGGTA+GGG + Chr6:47581565-47581584 MsG0680032683.01.T01:intron 45.0%
ACTTGTGAAGAACCTACGCA+TGG + Chr6:47585100-47585119 MsG0680032683.01.T01:CDS 45.0%
AGAGTTGCCATCGAAACCAT+AGG - Chr6:47580006-47580025 None:intergenic 45.0%
AGGAGTTATCATCGTTGCAG+AGG - Chr6:47584553-47584572 None:intergenic 45.0%
CATAATCTGCAGGTGACCAT+CGG - Chr6:47580094-47580113 None:intergenic 45.0%
CTAGAAGTCCTTTGTGCTCT+TGG - Chr6:47584670-47584689 None:intergenic 45.0%
GTGTGCCTTTATGGTGTGTT+GGG - Chr6:47581911-47581930 None:intergenic 45.0%
GTTACTAAGAGATGTGGGAG+TGG - Chr6:47583959-47583978 None:intergenic 45.0%
GTTAGGAACAAGAGCTGCAA+GGG - Chr6:47584295-47584314 None:intergenic 45.0%
TATTAGCAGGGTTGGACCTT+GGG - Chr6:47580578-47580597 None:intergenic 45.0%
TCAAAGGTGAGCGACTAATC+TGG + Chr6:47583230-47583249 MsG0680032683.01.T01:intron 45.0%
TGCAAGGGCAATGAAGTTCT+GGG - Chr6:47584280-47584299 None:intergenic 45.0%
TGTGTGCCTTTATGGTGTGT+TGG - Chr6:47581912-47581931 None:intergenic 45.0%
TTATTAGCAGGGTTGGACCT+TGG - Chr6:47580579-47580598 None:intergenic 45.0%
TTGAAAATACCCCTACCGGA+AGG - Chr6:47581578-47581597 None:intergenic 45.0%
TTTCAATTCCTCCACTGTCG+GGG + Chr6:47581874-47581893 MsG0680032683.01.T01:intron 45.0%
! ACCATAAAGGCACACACAAG+TGG + Chr6:47581916-47581935 MsG0680032683.01.T01:intron 45.0%
! AGGAGGTGTGGCTGAAAAAT+AGG - Chr6:47583666-47583685 None:intergenic 45.0%
! ATAAAGGCACACACAAGTGG+GGG + Chr6:47581919-47581938 MsG0680032683.01.T01:intron 45.0%
! ATCCAATGCCAAGAGCACAA+AGG + Chr6:47584659-47584678 MsG0680032683.01.T01:intron 45.0%
! CATAAAGGCACACACAAGTG+GGG + Chr6:47581918-47581937 MsG0680032683.01.T01:intron 45.0%
! CCATAAAGGCACACACAAGT+GGG + Chr6:47581917-47581936 MsG0680032683.01.T01:intron 45.0%
! CTCAGTTAGTCTGGAACAGA+AGG + Chr6:47582414-47582433 MsG0680032683.01.T01:intron 45.0%
! GACGCAACTCTTGTTTCCTA+TGG + Chr6:47580066-47580085 MsG0680032683.01.T01:CDS 45.0%
! GATAACCAGCTGTTGGTTGA+TGG - Chr6:47583134-47583153 None:intergenic 45.0%
! GATTAGTCGCTCACCTTTGA+TGG - Chr6:47583230-47583249 None:intergenic 45.0%
! GCTAATGAAGCGCTCTTGTT+AGG - Chr6:47583537-47583556 None:intergenic 45.0%
! TCAGCTACCCTTTTCACGAT+GGG - Chr6:47580828-47580847 None:intergenic 45.0%
! TTCAGCTACCCTTTTCACGA+TGG - Chr6:47580829-47580848 None:intergenic 45.0%
!! TTTGGGGTGTTGTCCAAAGA+TGG - Chr6:47584138-47584157 None:intergenic 45.0%
!!! AGCTTTTGGCTCAGTTAGTC+TGG + Chr6:47582405-47582424 MsG0680032683.01.T01:intron 45.0%
!!! AAATATATATATTTTTTTTG+TGG + Chr6:47581313-47581332 MsG0680032683.01.T01:intron 5.0%
!!! ATAAAATAAATTTTAAAATG+AGG - Chr6:47585252-47585271 None:intergenic 5.0%
!!! TTTTATTTTTATTTTTTTGA+GGG - Chr6:47582914-47582933 None:intergenic 5.0%
!!! TTTTTATTTTTATTTTTTTG+AGG - Chr6:47582915-47582934 None:intergenic 5.0%
ACCAGTTTCCGACCCATCAA+AGG + Chr6:47583214-47583233 MsG0680032683.01.T01:intron 50.0%
ACGGTCCCAACACACCATAA+AGG + Chr6:47581903-47581922 MsG0680032683.01.T01:intron 50.0%
ACGTACCATCAACCAACAGC+TGG + Chr6:47583126-47583145 MsG0680032683.01.T01:intron 50.0%
ACTTCAATGCTGCCATGCGT+AGG - Chr6:47585115-47585134 None:intergenic 50.0%
AGCATCCGGATTCGTAGGAA+TGG - Chr6:47580204-47580223 None:intergenic 50.0%
AGCCACACCTCCTTGAATTG+TGG + Chr6:47583673-47583692 MsG0680032683.01.T01:intron 50.0%
ATACCGGATTCGATTCCCAG+GGG - Chr6:47583295-47583314 None:intergenic 50.0%
ATTAGCAGGGTTGGACCTTG+GGG - Chr6:47580577-47580596 None:intergenic 50.0%
CACTTACAGAGCTGAGCATC+CGG - Chr6:47580218-47580237 None:intergenic 50.0%
CACTTCATACCTTCCGGTAG+GGG + Chr6:47581566-47581585 MsG0680032683.01.T01:intron 50.0%
CATGGCCATTCCTACGAATC+CGG + Chr6:47580196-47580215 MsG0680032683.01.T01:intron 50.0%
CCCACTTGTGTGTGCCTTTA+TGG - Chr6:47581920-47581939 None:intergenic 50.0%
CTGCAAGGGCAATGAAGTTC+TGG - Chr6:47584281-47584300 None:intergenic 50.0%
CTTGTTTCCTATGGGTCCGA+TGG + Chr6:47580075-47580094 MsG0680032683.01.T01:CDS 50.0%
GAATACCGGATTCGATTCCC+AGG - Chr6:47583297-47583316 None:intergenic 50.0%
GAATCGAATCCGGTATTCCC+TGG + Chr6:47583299-47583318 MsG0680032683.01.T01:intron 50.0%
GCCCAGTTATTATGGAACGG+AGG - Chr6:47582128-47582147 None:intergenic 50.0%
GGTTAGGAACAAGAGCTGCA+AGG - Chr6:47584296-47584315 None:intergenic 50.0%
GTCCTTTGTGCTCTTGGCAT+TGG - Chr6:47584664-47584683 None:intergenic 50.0%
GTCGTGACCATCAAACCCAT+AGG - Chr6:47580034-47580053 None:intergenic 50.0%
GTGGCAATGACCTCCTTTCA+AGG - Chr6:47583331-47583350 None:intergenic 50.0%
TCCTTTCAAGGACGTACCCA+GGG - Chr6:47583319-47583338 None:intergenic 50.0%
TGAAAGGAGGTCATTGCCAC+TGG + Chr6:47583331-47583350 MsG0680032683.01.T01:intron 50.0%
TGCAAACCGCTCAATGGAAC+CGG - Chr6:47580552-47580571 None:intergenic 50.0%
TGCCACAATTCAAGGAGGTG+TGG - Chr6:47583678-47583697 None:intergenic 50.0%
TGGTCACCTGCAGATTATGC+AGG + Chr6:47580095-47580114 MsG0680032683.01.T01:CDS 50.0%
TTATCATCGTTGCAGAGGCC+TGG - Chr6:47584548-47584567 None:intergenic 50.0%
! ACCTTTGATGGGTCGGAAAC+TGG - Chr6:47583218-47583237 None:intergenic 50.0%
! ACGAGACCTTTTGCCCTTTG+AGG - Chr6:47584202-47584221 None:intergenic 50.0%
! CAGCTACCCTTTTCACGATG+GGG - Chr6:47580827-47580846 None:intergenic 50.0%
! CTAATCTGGCTCATGCGTAG+AGG + Chr6:47583244-47583263 MsG0680032683.01.T01:intron 50.0%
! GAAACAAGAGTTGCGTCGGT+GGG - Chr6:47580063-47580082 None:intergenic 50.0%
! TAAAGGCACACACAAGTGGG+GGG + Chr6:47581920-47581939 MsG0680032683.01.T01:intron 50.0%
!! AGTATCGGCGCCCTTATAAC+TGG + Chr6:47582042-47582061 MsG0680032683.01.T01:intron 50.0%
!! CCTGGTTTGGTCAAGACTGT+CGG - Chr6:47584530-47584549 None:intergenic 50.0%
!! GATTTGGGTTGTGCATGGCA+AGG - Chr6:47580918-47580937 None:intergenic 50.0%
AATGGAACCGGGCCTCTCTA+AGG - Chr6:47580540-47580559 None:intergenic 55.0%
AGCTGAGCATCCGGATTCGT+AGG - Chr6:47580209-47580228 None:intergenic 55.0%
AGGACGTACCCAGGGAATAC+CGG - Chr6:47583311-47583330 None:intergenic 55.0%
AGTGGAAACCTGGGGAGTAG+TGG + Chr6:47580471-47580490 MsG0680032683.01.T01:intron 55.0%
ATCGTTGCAGAGGCCTGGTT+TGG - Chr6:47584543-47584562 None:intergenic 55.0%
CCGACAGTCTTGACCAAACC+AGG + Chr6:47584527-47584546 MsG0680032683.01.T01:intron 55.0%
CTCCTTTCAAGGACGTACCC+AGG - Chr6:47583320-47583339 None:intergenic 55.0%
CTGGGTACGTCCTTGAAAGG+AGG + Chr6:47583318-47583337 MsG0680032683.01.T01:intron 55.0%
GCAAACCGCTCAATGGAACC+GGG - Chr6:47580551-47580570 None:intergenic 55.0%
GCTCATACCTTAGAGAGGCC+CGG + Chr6:47580530-47580549 MsG0680032683.01.T01:intron 55.0%
GGAAACAAGAGTTGCGTCGG+TGG - Chr6:47580064-47580083 None:intergenic 55.0%
GTGGAAACCTGGGGAGTAGT+GGG + Chr6:47580472-47580491 MsG0680032683.01.T01:intron 55.0%
TACCGGATTCGATTCCCAGG+GGG - Chr6:47583294-47583313 None:intergenic 55.0%
TCCCTGGGTACGTCCTTGAA+AGG + Chr6:47583315-47583334 MsG0680032683.01.T01:intron 55.0%
TGGAAACCTGGGGAGTAGTG+GGG + Chr6:47580473-47580492 MsG0680032683.01.T01:intron 55.0%
TTCCCCCTGGGAATCGAATC+CGG + Chr6:47583289-47583308 MsG0680032683.01.T01:intron 55.0%
! ATGCGTAGAGGCATGTCCAC+TGG + Chr6:47583256-47583275 MsG0680032683.01.T01:intron 55.0%
! GTCGCTCACCTTTGATGGGT+CGG - Chr6:47583225-47583244 None:intergenic 55.0%
! TCAAGTTGCTTGGGCTCCAG+TGG - Chr6:47583350-47583369 None:intergenic 55.0%
AATTCCTCCACTGTCGGGGC+TGG + Chr6:47581878-47581897 MsG0680032683.01.T01:intron 60.0%
AGAGGCCCGGTTCCATTGAG+CGG + Chr6:47580543-47580562 MsG0680032683.01.T01:intron 60.0%
ATTCCTCCACTGTCGGGGCT+GGG + Chr6:47581879-47581898 MsG0680032683.01.T01:intron 60.0%
CAGGTGACCATCGGACCCAT+AGG - Chr6:47580085-47580104 None:intergenic 60.0%
GGGGTGTGCAAACCGCTCAA+TGG - Chr6:47580558-47580577 None:intergenic 60.0%
GTACTACCCCACTACTCCCC+AGG - Chr6:47580482-47580501 None:intergenic 60.0%
TGAGCGGTTTGCACACCCCA+AGG + Chr6:47580559-47580578 MsG0680032683.01.T01:intron 60.0%
TTCCCAGGGGGAACAACGCT+TGG - Chr6:47583282-47583301 None:intergenic 60.0%
GGGGAACAACGCTTGGCCAG+TGG - Chr6:47583275-47583294 None:intergenic 65.0%
TCCACTGTCGGGGCTGGGTA+CGG + Chr6:47581884-47581903 MsG0680032683.01.T01:intron 65.0%
! GGCCAAGCGTTGTTCCCCCT+GGG + Chr6:47583277-47583296 MsG0680032683.01.T01:intron 65.0%
! TGGCCAAGCGTTGTTCCCCC+TGG + Chr6:47583276-47583295 MsG0680032683.01.T01:intron 65.0%
ACCGTACCCAGCCCCGACAG+TGG - Chr6:47581888-47581907 None:intergenic 70.0%
GTACCCAGCCCCGACAGTGG+AGG - Chr6:47581885-47581904 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr6 gene 47579988 47585396 47579988 ID=MsG0680032683.01;Name=MsG0680032683.01
Chr6 mRNA 47579988 47585396 47579988 ID=MsG0680032683.01.T01;Parent=MsG0680032683.01;Name=MsG0680032683.01.T01;_AED=0.49;_eAED=0.56;_QI=0|0|0.66|1|1|1|3|248|237
Chr6 exon 47579988 47580116 47579988 ID=MsG0680032683.01.T01:exon:16717;Parent=MsG0680032683.01.T01
Chr6 exon 47583820 47584323 47583820 ID=MsG0680032683.01.T01:exon:16718;Parent=MsG0680032683.01.T01
Chr6 exon 47585068 47585396 47585068 ID=MsG0680032683.01.T01:exon:16719;Parent=MsG0680032683.01.T01
Chr6 CDS 47579988 47580116 47579988 ID=MsG0680032683.01.T01:cds;Parent=MsG0680032683.01.T01
Chr6 CDS 47583820 47584323 47583820 ID=MsG0680032683.01.T01:cds;Parent=MsG0680032683.01.T01
Chr6 CDS 47585068 47585148 47585068 ID=MsG0680032683.01.T01:cds;Parent=MsG0680032683.01.T01
Chr6 three_prime_UTR 47585149 47585396 47585149 ID=MsG0680032683.01.T01:three_prime_utr;Parent=MsG0680032683.01.T01
Gene Sequence

>MsG0680032683.01.T01

ATGCAACTCTTGTTTCCTATGGTTTCGATGGCAACTCTTGATTCCTATGGGTTTGATGGTCACGACGAATTTCCCACCGACGCAACTCTTGTTTCCTATGGGTCCGATGGTCACCTGCAGATTATGCAGGAAATGGACGAACATAATTTATTTGCTGAGGAAAGCAACTTGAATTTCCTTGATACAGATGTGGTAGAGTTTCTCTCACATGACATAGGTAATGTATTCCAAGAACAAAACAAACAACAATGTTTCACTTCGGGGTCCACTCCCACATCTCTTAGTAACTCATCAAGTTATGAAACAAATTTGGACTCTTTCGACTTTGATTTTGATAAGCCAAATATGGAGCTTAAAAAAATTGATCATAGCAACAAAATCAATGAAACCTTTTCACCAAAACTTTCTTCATCACCATCTAAATCATCTTTTCAGTTTCAAATTCCATCTTTGGACAACACCCCAAATTTACCCACTACTAATTCCTCACAAAACTTGGAAACAAAAACCTCAAAGGGCAAAAGGTCTCGTACTCATCATGGTCAAGATCAAATCATGGCTGAGAGAAAGGGAAGAGAGAAACTCACCCAGAACTTCATTGCCCTTGCAGCTCTTGTTCCTAACCTTAAAAAGTTGGGTGAAGGTTACAACATGAGCATAAAGGAACTTGTGAAGAACCTACGCATGGCAGCATTGAAGTTTATGTCATCATAA
Protein sequence

>MsG0680032683.01.T01

MQLLFPMVSMATLDSYGFDGHDEFPTDATLVSYGSDGHLQIMQEMDEHNLFAEESNLNFLDTDVVEFLSHDIGNVFQEQNKQQCFTSGSTPTSLSNSSSYETNLDSFDFDFDKPNMELKKIDHSNKINETFSPKLSSSPSKSSFQFQIPSLDNTPNLPTTNSSQNLETKTSKGKRSRTHHGQDQIMAERKGREKLTQNFIALAALVPNLKKLGEGYNMSIKELVKNLRMAALKFMSS*