AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680033089.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680033089.01.T01 MTR_3g035130 95.363 496 23 0 1 496 1 496 0.0 973
MsG0680033089.01.T01 MTR_3g035130 96.476 454 16 0 1 454 1 454 0.0 901
MsG0680033089.01.T01 MTR_2g095510 31.303 476 306 12 32 496 55 520 1.02e-52 187
MsG0680033089.01.T01 MTR_4g057730 31.992 472 299 13 32 490 55 517 1.03e-52 187
MsG0680033089.01.T01 MTR_4g011790 29.457 516 317 16 25 501 78 585 1.12e-51 186
MsG0680033089.01.T01 MTR_4g011790 29.457 516 317 16 25 501 78 585 2.12e-51 185
MsG0680033089.01.T01 MTR_4g011790 28.952 525 317 17 25 501 78 594 3.42e-49 179
MsG0680033089.01.T01 MTR_5g027480 29.779 497 327 11 32 515 68 555 1.07e-48 177
MsG0680033089.01.T01 MTR_5g007640 29.301 529 322 18 17 517 81 585 1.15e-48 177
MsG0680033089.01.T01 MTR_1569s0010 27.799 518 329 11 10 490 1 510 2.81e-47 172
MsG0680033089.01.T01 MTR_3g460770 26.243 503 337 12 32 516 56 542 4.01e-47 172
MsG0680033089.01.T01 MTR_4g013210 27.553 519 323 17 10 484 58 567 7.29e-47 172
MsG0680033089.01.T01 MTR_4g057730 33.097 423 261 13 32 441 55 468 7.79e-47 170
MsG0680033089.01.T01 MTR_4g013210 32.249 369 213 12 164 501 70 432 9.77e-47 169
MsG0680033089.01.T01 MTR_2g105570 27.651 481 320 13 42 502 64 536 2.71e-45 167
MsG0680033089.01.T01 MTR_4g128337 29.167 480 316 10 32 496 59 529 4.79e-45 166
MsG0680033089.01.T01 MTR_1g026310 27.362 508 337 13 15 498 44 543 6.61e-45 166
MsG0680033089.01.T01 MTR_4g077900 29.150 494 310 13 45 515 2 478 5.03e-44 162
MsG0680033089.01.T01 MTR_1g063110 29.474 475 312 12 32 490 56 523 7.67e-43 160
MsG0680033089.01.T01 MTR_8g039720 28.601 486 310 15 32 491 65 539 9.92e-43 160
MsG0680033089.01.T01 MTR_0803s0020 25.510 490 320 13 25 490 254 722 3.32e-42 162
MsG0680033089.01.T01 MTR_1g063120 28.630 489 331 12 28 501 53 538 3.73e-42 158
MsG0680033089.01.T01 MTR_5g027500 27.327 505 333 11 36 515 73 568 8.46e-42 157
MsG0680033089.01.T01 MTR_4g005750 30.041 486 306 17 33 498 54 525 4.30e-41 155
MsG0680033089.01.T01 MTR_4g057730 32.921 404 249 13 32 422 55 449 1.16e-40 152
MsG0680033089.01.T01 MTR_2g095510 32.338 402 251 12 32 422 55 446 2.38e-40 152
MsG0680033089.01.T01 MTR_3g088870 25.510 490 339 13 24 501 69 544 3.22e-40 153
MsG0680033089.01.T01 MTR_8g074040 26.640 503 331 13 15 488 65 558 9.34e-39 149
MsG0680033089.01.T01 MTR_3g064420 27.586 522 331 13 5 488 15 527 2.53e-38 148
MsG0680033089.01.T01 MTR_5g008800 28.291 509 314 20 18 488 19 514 2.87e-37 144
MsG0680033089.01.T01 MTR_5g008820 27.699 491 315 17 26 488 34 512 9.82e-37 143
MsG0680033089.01.T01 MTR_3g088880 26.681 461 298 15 58 501 105 542 1.17e-36 143
MsG0680033089.01.T01 MTR_4g013210 25.758 528 314 17 10 501 58 543 1.84e-36 142
MsG0680033089.01.T01 MTR_1g073180 25.268 467 319 12 32 488 61 507 7.37e-36 140
MsG0680033089.01.T01 MTR_2g030240 26.104 521 334 12 10 486 4 517 1.04e-35 140
MsG0680033089.01.T01 MTR_1g073180 25.325 462 315 12 32 483 83 524 2.82e-35 139
MsG0680033089.01.T01 MTR_8g074040 28.657 335 215 9 170 488 114 440 1.09e-34 136
MsG0680033089.01.T01 MTR_4g013210 29.609 358 196 11 164 501 70 391 4.91e-34 133
MsG0680033089.01.T01 MTR_5g076240 27.143 490 316 15 32 488 40 521 1.90e-33 134
MsG0680033089.01.T01 MTR_1g090737 28.333 480 314 15 32 496 83 547 5.16e-33 132
MsG0680033089.01.T01 MTR_8g074120 26.452 465 292 13 59 488 20 469 1.30e-32 131
MsG0680033089.01.T01 MTR_5g076220 26.718 524 333 16 3 488 12 522 6.08e-30 124
MsG0680033089.01.T01 MTR_4g121600 22.945 523 359 14 3 488 18 533 9.01e-30 123
MsG0680033089.01.T01 MTR_2g044180 26.822 343 217 10 170 488 110 442 2.63e-29 120
MsG0680033089.01.T01 MTR_2g044180 26.822 343 217 10 170 488 201 533 4.93e-29 121
MsG0680033089.01.T01 MTR_2g030240 28.011 357 221 8 162 486 71 423 2.94e-28 117
MsG0680033089.01.T01 MTR_7g084850 24.901 506 320 16 32 488 203 697 8.87e-27 115
MsG0680033089.01.T01 MTR_4g013210 27.747 364 224 12 42 375 92 446 1.00e-26 113
MsG0680033089.01.T01 MTR_1054s0020 24.652 503 333 15 6 488 269 745 1.79e-25 111
MsG0680033089.01.T01 MTR_4g013210 25.561 446 270 15 10 432 58 464 2.20e-25 109
MsG0680033089.01.T01 MTR_5g076200 25.382 524 340 16 3 488 12 522 5.43e-25 108
MsG0680033089.01.T01 MTR_0161s0050 28.613 346 203 15 170 488 196 524 1.37e-22 101
MsG0680033089.01.T01 MTR_1g104810 25.904 332 191 10 161 444 189 513 6.72e-22 99.8
MsG0680033089.01.T01 MTR_1g104810 25.904 332 191 10 161 444 256 580 7.06e-22 99.8
MsG0680033089.01.T01 MTR_5g023730 24.031 516 337 17 10 488 21 518 6.40e-21 96.7
MsG0680033089.01.T01 MTR_4g068670 21.573 496 304 15 21 444 66 548 8.83e-20 93.2
MsG0680033089.01.T01 MTR_1g034360 21.212 495 300 14 25 444 71 550 1.07e-19 93.2
MsG0680033089.01.T01 MTR_5g009350 23.457 486 295 14 28 444 74 551 3.28e-19 91.7
MsG0680033089.01.T01 MTR_5g009350 23.457 486 295 14 28 444 74 551 3.73e-19 91.3
MsG0680033089.01.T01 MTR_5g009350 23.851 457 272 13 28 416 74 522 4.51e-19 90.9
MsG0680033089.01.T01 MTR_5g009350 23.851 457 272 13 28 416 74 522 5.19e-19 90.5
MsG0680033089.01.T01 MTR_3g087980 23.967 484 282 15 32 437 106 581 8.64e-18 87.0
MsG0680033089.01.T01 MTR_1g030290 26.230 366 194 12 153 450 239 596 4.35e-17 85.1
MsG0680033089.01.T01 MTR_5g009360 22.634 486 299 14 28 444 74 551 1.00e-16 83.6
MsG0680033089.01.T01 MTR_3g082660 23.992 496 294 14 33 450 138 628 1.84e-15 79.7
MsG0680033089.01.T01 MTR_5g009360 24.409 381 213 12 131 444 53 425 2.02e-15 79.3
MsG0680033089.01.T01 MTR_7g109830 21.989 523 310 17 5 444 42 549 2.89e-15 79.3
MsG0680033089.01.T01 MTR_1g086600 21.441 555 345 15 5 482 64 604 3.84e-15 79.0
MsG0680033089.01.T01 MTR_4g050430 52.941 68 32 0 1 68 1 68 1.25e-14 69.3
MsG0680033089.01.T01 MTR_3g084450 23.485 396 208 16 164 477 54 436 4.39e-13 72.0
MsG0680033089.01.T01 MTR_2g098490 26.444 329 195 13 160 448 643 964 6.76e-13 72.4
MsG0680033089.01.T01 MTR_1g026470 25.145 346 230 10 15 339 44 381 1.50e-12 69.7
MsG0680033089.01.T01 MTR_1g026430 24.855 346 231 10 15 339 44 381 1.75e-12 69.7
MsG0680033089.01.T01 MTR_4g057755 44.286 70 38 1 373 441 47 116 2.48e-12 64.3
MsG0680033089.01.T01 MTR_3g084470 26.901 171 108 6 295 451 457 624 4.81e-11 65.9
MsG0680033089.01.T01 MTR_8g083170 26.904 197 117 8 295 477 464 647 7.42e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680033089.01.T01 AT3G48990 74.239 493 123 3 6 496 5 495 0.0 726
MsG0680033089.01.T01 AT4G05160 28.797 507 338 12 5 496 27 525 8.79e-51 182
MsG0680033089.01.T01 AT1G20510 28.482 481 329 11 31 502 57 531 2.72e-50 181
MsG0680033089.01.T01 AT3G16170 30.064 469 277 15 68 501 142 594 1.87e-49 180
MsG0680033089.01.T01 AT1G20480 28.118 473 317 12 41 498 84 548 1.29e-47 174
MsG0680033089.01.T01 AT4G19010 28.395 486 326 11 30 501 71 548 1.55e-47 174
MsG0680033089.01.T01 AT5G38120 30.816 490 311 17 24 498 57 533 4.39e-47 172
MsG0680033089.01.T01 AT3G21240 27.823 496 313 15 33 502 65 541 3.12e-46 170
MsG0680033089.01.T01 AT1G20500 28.481 474 312 13 32 490 64 525 2.16e-45 167
MsG0680033089.01.T01 AT1G65060 28.337 487 320 14 33 502 77 551 9.86e-45 166
MsG0680033089.01.T01 AT5G63380 27.778 486 320 16 31 502 77 545 1.00e-44 166
MsG0680033089.01.T01 AT5G38120 30.998 471 297 17 24 479 57 514 1.60e-44 164
MsG0680033089.01.T01 AT1G51680 28.800 500 308 16 33 502 67 548 2.34e-43 162
MsG0680033089.01.T01 AT1G20510 30.072 419 278 11 31 440 57 469 2.17e-42 157
MsG0680033089.01.T01 AT1G51680 29.228 479 291 16 33 481 67 527 5.05e-42 158
MsG0680033089.01.T01 AT3G21240 29.234 431 260 15 33 437 65 476 4.39e-41 154
MsG0680033089.01.T01 AT3G21240 29.234 431 260 15 33 437 65 476 4.39e-41 154
MsG0680033089.01.T01 AT5G38120 32.176 432 265 17 24 440 57 475 6.23e-41 154
MsG0680033089.01.T01 AT5G38120 32.176 432 265 17 24 440 57 475 6.23e-41 154
MsG0680033089.01.T01 AT1G66120 26.990 515 329 14 10 488 19 522 1.29e-40 154
MsG0680033089.01.T01 AT1G65890 27.017 533 313 17 10 488 19 529 4.75e-40 153
MsG0680033089.01.T01 AT1G20560 29.051 506 303 16 22 488 32 520 7.08e-40 152
MsG0680033089.01.T01 AT1G65880 26.590 519 334 12 10 488 19 530 7.40e-40 152
MsG0680033089.01.T01 AT3G21230 26.430 507 304 17 32 493 74 556 1.07e-39 152
MsG0680033089.01.T01 AT1G51680 30.805 435 253 16 33 437 67 483 1.54e-39 150
MsG0680033089.01.T01 AT3G21230 26.294 483 297 16 32 479 74 532 3.14e-38 147
MsG0680033089.01.T01 AT1G20560 33.036 336 199 13 170 488 116 442 1.33e-37 144
MsG0680033089.01.T01 AT1G20510 29.426 418 273 12 31 432 57 468 3.03e-36 140
MsG0680033089.01.T01 AT1G65060 29.095 409 261 14 33 424 77 473 6.66e-36 140
MsG0680033089.01.T01 AT1G75960 27.043 514 338 13 6 490 15 520 6.08e-35 138
MsG0680033089.01.T01 AT3G16910 24.809 524 349 14 3 488 20 536 7.97e-35 138
MsG0680033089.01.T01 AT3G21230 26.637 443 268 14 32 440 74 493 1.34e-34 136
MsG0680033089.01.T01 AT1G62940 27.521 476 313 15 25 483 48 508 1.62e-34 137
MsG0680033089.01.T01 AT1G30520 28.077 520 298 18 24 487 25 524 3.24e-34 136
MsG0680033089.01.T01 AT1G30520 28.077 520 298 18 24 487 25 524 3.24e-34 136
MsG0680033089.01.T01 AT5G16340 26.550 516 338 15 6 490 15 520 3.78e-32 130
MsG0680033089.01.T01 AT2G17650 25.497 553 326 13 2 488 43 575 1.12e-31 129
MsG0680033089.01.T01 AT5G16370 27.027 518 333 16 6 490 15 520 1.49e-30 125
MsG0680033089.01.T01 AT1G68270 25.094 530 297 14 10 488 19 499 4.98e-30 124
MsG0680033089.01.T01 AT1G77240 26.286 525 324 19 6 488 15 518 2.26e-28 119
MsG0680033089.01.T01 AT1G21530 25.188 532 329 17 3 488 12 520 5.45e-28 117
MsG0680033089.01.T01 AT1G21530 25.468 534 327 19 3 488 12 522 9.03e-28 117
MsG0680033089.01.T01 AT1G20490 28.684 380 238 14 32 392 64 429 8.28e-27 113
MsG0680033089.01.T01 AT1G20490 28.684 380 238 14 32 392 64 429 8.28e-27 113
MsG0680033089.01.T01 AT5G36880 24.206 504 326 16 32 488 198 692 5.41e-26 112
MsG0680033089.01.T01 AT5G36880 24.206 504 326 16 32 488 148 642 6.52e-26 112
MsG0680033089.01.T01 AT5G36880 24.206 504 326 16 32 488 148 642 6.52e-26 112
MsG0680033089.01.T01 AT5G36880 24.206 504 326 16 32 488 148 642 6.52e-26 112
MsG0680033089.01.T01 AT5G36880 24.206 504 326 16 32 488 148 642 6.52e-26 112
MsG0680033089.01.T01 AT1G21540 26.236 526 334 19 3 488 12 523 7.45e-26 111
MsG0680033089.01.T01 AT1G76290 22.770 527 351 16 10 501 19 524 2.67e-24 107
MsG0680033089.01.T01 AT5G36880 24.726 457 293 14 32 445 148 596 2.92e-24 107
MsG0680033089.01.T01 AT5G27600 23.840 474 291 14 32 444 119 583 3.59e-23 103
MsG0680033089.01.T01 AT4G11030 24.532 481 280 15 10 415 50 522 1.65e-22 102
MsG0680033089.01.T01 AT1G30520 26.622 447 265 14 24 427 25 451 1.31e-21 98.2
MsG0680033089.01.T01 AT1G30520 26.622 447 265 14 24 427 25 451 1.31e-21 98.2
MsG0680033089.01.T01 AT4G23850 24.138 493 287 17 1 416 41 523 1.49e-21 99.0
MsG0680033089.01.T01 AT2G04350 23.950 476 281 14 33 431 131 602 7.66e-20 93.6
MsG0680033089.01.T01 AT2G04350 23.950 476 281 14 33 431 131 602 7.66e-20 93.6
MsG0680033089.01.T01 AT3G05970 25.602 332 192 10 161 444 259 583 2.02e-19 92.4
MsG0680033089.01.T01 AT1G64400 23.241 469 278 13 20 416 65 523 2.36e-17 85.9
MsG0680033089.01.T01 AT3G21230 23.724 392 243 13 32 390 74 442 7.01e-17 83.6
MsG0680033089.01.T01 AT1G77590 23.591 479 287 13 32 437 107 579 9.24e-17 84.0
MsG0680033089.01.T01 AT1G77590 25.740 338 185 10 163 437 99 433 1.05e-16 83.6
MsG0680033089.01.T01 AT4G14070 27.749 191 115 8 295 469 478 661 2.00e-12 70.5
MsG0680033089.01.T01 AT3G23790 29.240 171 104 6 295 451 462 629 2.18e-11 67.0

Find 178 sgRNAs with CRISPR-Local

Find 581 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGTTCATGGGTTGATTGC+TGG 0.234186 6:+56447105 MsG0680033089.01.T01:CDS
TACGAATAAACCGGAGTTTC+GGG 0.234905 6:-56447302 None:intergenic
TGCGGTGGCGTTGCCGGCGG+CGG 0.237024 6:+56447155 MsG0680033089.01.T01:CDS
GCATCTTGTGGGTCGGATTA+AGG 0.237441 6:+56450515 MsG0680033089.01.T01:CDS
TCGTTGGCTCCGGTTATTCT+AGG 0.239394 6:+56447336 MsG0680033089.01.T01:CDS
CTTATATATTTGATCAATAA+AGG 0.239730 6:+56456031 MsG0680033089.01.T01:three_prime_UTR
CCCACTGAGTCAGCACAATT+TGG 0.242585 6:+56447005 MsG0680033089.01.T01:CDS
CGGAGGTGCGGTGGCGTTGC+CGG 0.250865 6:+56447149 MsG0680033089.01.T01:CDS
TAACGGCGAGGTTTGTATTA+AGG 0.251734 6:+56450380 MsG0680033089.01.T01:CDS
GGATGAATCGGGTCGGATTA+TGG 0.268799 6:+56450347 MsG0680033089.01.T01:CDS
GATGTGTATGCTGCGTTTAA+TGG 0.271483 6:-56446715 None:intergenic
AGTTTCGGGTAAACCGGTTC+AGG 0.285963 6:-56447288 None:intergenic
GGGTCAAGAAATGGCTATTT+TGG 0.287185 6:+56450326 MsG0680033089.01.T01:CDS
AGCATTTGGGGCACCCGTTT+TGG 0.295184 6:+56450209 MsG0680033089.01.T01:CDS
CCGAGTTCGCTGACTCGGTT+TGG 0.309477 6:-56446903 None:intergenic
TACCATACACCAGATTATAT+TGG 0.313740 6:+56447248 MsG0680033089.01.T01:CDS
GATCGTTTGGAGGAAGCATT+TGG 0.325350 6:+56450195 MsG0680033089.01.T01:intron
CTACGAATAAACCGGAGTTT+CGG 0.328986 6:-56447303 None:intergenic
TGAAGTGGATGCTGTCCTTC+TGG 0.329107 6:+56451491 MsG0680033089.01.T01:CDS
GATTCTCTGCATCAACGTTT+TGG 0.330903 6:+56447181 MsG0680033089.01.T01:CDS
ACAAACATTATAAATATTAC+AGG 0.337341 6:+56445888 None:intergenic
AACGGCGAGGTTTGTATTAA+GGG 0.358728 6:+56450381 MsG0680033089.01.T01:CDS
TCAATATTTGATCCTTCTCT+TGG 0.361295 6:-56455836 None:intergenic
GCTTTGTGGGAACCATCTTC+TGG 0.366997 6:-56450282 None:intergenic
GAAACATTGAATCGGTTTAT+CGG 0.369797 6:+56447040 MsG0680033089.01.T01:CDS
GTAGCTCAGGCAGTTGCTTT+CGG 0.374675 6:+56451525 MsG0680033089.01.T01:CDS
CGGCAACGCCACCGCACCTC+CGG 0.376573 6:-56447148 None:intergenic
CCCAACCGACCCAGCTTTGT+GGG 0.379424 6:-56450295 None:intergenic
TTATATATTTGATCAATAAA+GGG 0.381993 6:+56456032 MsG0680033089.01.T01:three_prime_UTR
CAGCGGATTGGACTAATTCA+TGG 0.384687 6:-56446096 None:intergenic
ATGTTCATGGGTTGATTGCT+GGG 0.386107 6:+56447106 MsG0680033089.01.T01:CDS
AACCGGAGTTTCGGGTAAAC+CGG 0.388792 6:-56447294 None:intergenic
ATGAGAACCTCGATGGTGTT+GGG 0.390806 6:-56446175 None:intergenic
CTTCTCTTAACACCATTAGA+AGG 0.392009 6:+56446778 MsG0680033089.01.T01:CDS
GCGGTGGCGTTGCCGGCGGC+GGG 0.392999 6:+56447156 MsG0680033089.01.T01:CDS
TTGTTTGGTTGGTTTCATAC+TGG 0.396422 6:+56450459 MsG0680033089.01.T01:CDS
TGGTTTCATACTGGTGATAT+TGG 0.400021 6:+56450468 MsG0680033089.01.T01:CDS
GTATTTGATACTAGATCGTT+TGG 0.401273 6:+56450182 MsG0680033089.01.T01:intron
GCAGCGTTGTTGCCTTCTAA+TGG 0.415503 6:-56446790 None:intergenic
AGTCATGAAGTCCCTAGCTT+TGG 0.416144 6:+56456005 MsG0680033089.01.T01:exon
ATCGTTTGGAGGAAGCATTT+GGG 0.416524 6:+56450196 MsG0680033089.01.T01:CDS
TAATTATATACTATGTTAAG+AGG 0.417855 6:+56456109 MsG0680033089.01.T01:three_prime_UTR
ATGGAGATTGGAGATGATTA+AGG 0.423291 6:-56445920 None:intergenic
GTGAGAGCGACGACATCGTT+GGG 0.425982 6:-56446148 None:intergenic
GATGGGTATTTGCATCTTGT+GGG 0.426499 6:+56450504 MsG0680033089.01.T01:CDS
AATCTTGCCAGTGGCTGTCT+TGG 0.427611 6:-56455941 None:intergenic
TTAATGGTGCTGCCGTGGCT+CGG 0.428020 6:-56446699 None:intergenic
ATCTTGCCAGTGGCTGTCTT+GGG 0.436181 6:-56455940 None:intergenic
AAACACCAACCTAGAATAAC+CGG 0.441521 6:-56447345 None:intergenic
TGATGGGTATTTGCATCTTG+TGG 0.444192 6:+56450503 MsG0680033089.01.T01:CDS
ATATATAAGCTTCCAAAGCT+AGG 0.444402 6:-56456017 None:intergenic
CGAGTTCGCTGACTCGGTTT+GGG 0.447576 6:-56446902 None:intergenic
TCTTCACCGTATTTCTGATC+TGG 0.450488 6:-56451552 None:intergenic
CTAATTCATGGAGGTGGGAA+TGG 0.451103 6:-56446084 None:intergenic
CCCACAAAGCTGGGTCGGTT+GGG 0.455784 6:+56450295 MsG0680033089.01.T01:CDS
TCAAATCCTTTGCCAGAAGA+TGG 0.456671 6:+56450270 MsG0680033089.01.T01:CDS
TGAAACCGAGTTCGCTGACT+CGG 0.459037 6:-56446908 None:intergenic
GGTTTATCGGCTCAGTGAGT+TGG 0.459359 6:+56447053 MsG0680033089.01.T01:CDS
GAAGATGGTTCCCACAAAGC+TGG 0.459406 6:+56450285 MsG0680033089.01.T01:CDS
AAAGGGGTTGGAGGGAAACT+TGG 0.461064 6:+56456049 MsG0680033089.01.T01:three_prime_UTR
GAAACCTGTGGGTCAAGAAA+TGG 0.462604 6:+56450317 MsG0680033089.01.T01:CDS
CTGTAGTGCTTCGTTGGCTC+CGG 0.462620 6:+56447326 MsG0680033089.01.T01:CDS
ATTATGGAGGCTGATGTTAA+CGG 0.463386 6:+56450363 MsG0680033089.01.T01:CDS
AGGACAGCATCCACTTCAAT+TGG 0.464151 6:-56451486 None:intergenic
ATAGCATAAGCTTCCAAAAC+GGG 0.468891 6:-56450222 None:intergenic
GGCTGTCTTGGGCAAAGAAT+CGG 0.471547 6:-56455929 None:intergenic
GATTGGAGATGATTAAGGTC+AGG 0.472724 6:-56445915 None:intergenic
TTGCTGAGTTCACTCGGTGC+CGG 0.473251 6:+56447129 MsG0680033089.01.T01:CDS
GTCCAATATAATCTGGTGTA+TGG 0.477662 6:-56447250 None:intergenic
GATGACGGTCCAATATAATC+TGG 0.478634 6:-56447257 None:intergenic
TAATTCATGGAGGTGGGAAT+GGG 0.478760 6:-56446083 None:intergenic
TTGAATGAAGAAGATGTTTG+TGG 0.479258 6:-56445955 None:intergenic
ATTGGTTACTTTGATTCTGA+TGG 0.480743 6:+56450486 MsG0680033089.01.T01:CDS
TCCCAACCGACCCAGCTTTG+TGG 0.482067 6:-56450296 None:intergenic
TGAGATGATTGGCAGCGGAT+TGG 0.482369 6:-56446108 None:intergenic
GCCAATCATCTCATCTCCGC+TGG 0.486405 6:+56446118 MsG0680033089.01.T01:CDS
GCAACTGCCTGAGCTACGTC+TGG 0.486875 6:-56451519 None:intergenic
TCCCACAAAGCTGGGTCGGT+TGG 0.487622 6:+56450294 MsG0680033089.01.T01:CDS
AAGGGACAAAATGTTACAAA+AGG 0.489834 6:+56450399 MsG0680033089.01.T01:CDS
CACTACAGCTACGAATAAAC+CGG 0.490534 6:-56447311 None:intergenic
TGATGAATATGAATGGAGAT+TGG 0.493154 6:-56445932 None:intergenic
CCAAACCGAGTCAGCGAACT+CGG 0.493888 6:+56446903 MsG0680033089.01.T01:CDS
AGGTGCGGTGGCGTTGCCGG+CGG 0.494600 6:+56447152 MsG0680033089.01.T01:CDS
GGCGACGGAGATGGCACGAC+GGG 0.494759 6:-56446044 None:intergenic
TCAGCACAATTTGGTTTCAT+CGG 0.495409 6:+56447014 MsG0680033089.01.T01:CDS
CGGAGATGGCACGACGGGAG+GGG 0.495576 6:-56446039 None:intergenic
ATCGGTTCGAAACATTGAAT+CGG 0.496518 6:+56447032 MsG0680033089.01.T01:CDS
GAAAATATCACCAATTGAAG+TGG 0.497025 6:+56451476 MsG0680033089.01.T01:CDS
TGATCAATAAAGGGGTTGGA+GGG 0.497705 6:+56456041 MsG0680033089.01.T01:three_prime_UTR
AGGAACCACAAGTCGGCCTA+AGG 0.499184 6:+56446978 MsG0680033089.01.T01:CDS
TATTTGATCAATAAAGGGGT+TGG 0.501935 6:+56456037 MsG0680033089.01.T01:three_prime_UTR
CGTCGTGCCATCTCCGTCGC+CGG 0.504409 6:+56446046 MsG0680033089.01.T01:CDS
ACGGAGATGGCACGACGGGA+GGG 0.506136 6:-56446040 None:intergenic
TCGTAGCTGTAGTGCTTCGT+TGG 0.506151 6:+56447320 MsG0680033089.01.T01:CDS
GCTGGGTTGCTGAGTTCACT+CGG 0.507720 6:+56447123 MsG0680033089.01.T01:CDS
AATATAATCTGGTGTATGGT+AGG 0.508133 6:-56447246 None:intergenic
GGCACATCCAGACGTAGCTC+AGG 0.509060 6:+56451512 MsG0680033089.01.T01:CDS
TTGGTTACTTTGATTCTGAT+GGG 0.509552 6:+56450487 MsG0680033089.01.T01:CDS
GCAGAGAATCTCCCCGCCGC+CGG 0.511049 6:-56447168 None:intergenic
ATTGGACTAATTCATGGAGG+TGG 0.511984 6:-56446090 None:intergenic
GACGGAGATGGCACGACGGG+AGG 0.512413 6:-56446041 None:intergenic
TTGATCAATAAAGGGGTTGG+AGG 0.512817 6:+56456040 MsG0680033089.01.T01:three_prime_UTR
TCATCAAAGTAACCCTGAAC+CGG 0.513338 6:+56447275 MsG0680033089.01.T01:CDS
GGTATTTGCATCTTGTGGGT+CGG 0.517312 6:+56450508 MsG0680033089.01.T01:CDS
ATTAAGGAGCTCATCAATAG+AGG 0.517540 6:+56450531 MsG0680033089.01.T01:CDS
TATGAGAACCTCGATGGTGT+TGG 0.518602 6:-56446176 None:intergenic
GTTTCGGGTAAACCGGTTCA+GGG 0.519234 6:-56447287 None:intergenic
TGGGAACCATCTTCTGGCAA+AGG 0.520309 6:-56450276 None:intergenic
TCCAGCGGAGATGAGATGAT+TGG 0.522291 6:-56446119 None:intergenic
AGGGAAACTTGGCATATAAG+AGG 0.522311 6:+56456060 MsG0680033089.01.T01:three_prime_UTR
TTTGATGATTCTTGTGAAGT+GGG 0.524676 6:+56456137 MsG0680033089.01.T01:three_prime_UTR
TCTTTGCCCAAGACAGCCAC+TGG 0.525878 6:+56455934 MsG0680033089.01.T01:CDS
ATCAAATATTGATGCTGAAG+AGG 0.528471 6:+56455847 MsG0680033089.01.T01:CDS
CATGGAGGTGGGAATGGGTG+AGG 0.533828 6:-56446078 None:intergenic
ATAGCCATTTCTTGACCCAC+AGG 0.533996 6:-56450321 None:intergenic
ATTGGAGATGATTAAGGTCA+GGG 0.536195 6:-56445914 None:intergenic
GGGTCGGTTGGGAAACCTGT+GGG 0.538273 6:+56450306 MsG0680033089.01.T01:CDS
AACCGGTTTACCCGAAACTC+CGG 0.542049 6:+56447292 MsG0680033089.01.T01:CDS
TATATAAGCTTCCAAAGCTA+GGG 0.542352 6:-56456016 None:intergenic
GAGAAGCTTTGATTCTGAGT+CGG 0.543617 6:-56446761 None:intergenic
ATATAATGCCACGTGGTACA+CGG 0.547796 6:+56447218 MsG0680033089.01.T01:CDS
ACCAAATTGTGCTGACTCAG+TGG 0.548852 6:-56447006 None:intergenic
TTCACTCGGTGCCGGAGGTG+CGG 0.551437 6:+56447137 MsG0680033089.01.T01:CDS
GGTGAGAGCGACGACATCGT+TGG 0.552550 6:-56446149 None:intergenic
AGCGACGGATTGGAGTAATC+CGG 0.552594 6:-56446008 None:intergenic
TGGGTCGGTTGGGAAACCTG+TGG 0.556221 6:+56450305 MsG0680033089.01.T01:CDS
TTTGTGGTGATGAATATGAA+TGG 0.556585 6:-56445939 None:intergenic
AAGATGGTTCCCACAAAGCT+GGG 0.557458 6:+56450286 MsG0680033089.01.T01:CDS
GGAACCACAAGTCGGCCTAA+GGG 0.558582 6:+56446979 MsG0680033089.01.T01:CDS
CGGTGGCGTTGCCGGCGGCG+GGG 0.560878 6:+56447157 MsG0680033089.01.T01:CDS
CATAGCATAAGCTTCCAAAA+CGG 0.561507 6:-56450223 None:intergenic
ACTCGGTGCCGGAGGTGCGG+TGG 0.563190 6:+56447140 MsG0680033089.01.T01:CDS
GGAGTGCCAGATCAGAAATA+CGG 0.571826 6:+56451546 MsG0680033089.01.T01:CDS
TATATATTTGATCAATAAAG+GGG 0.571982 6:+56456033 MsG0680033089.01.T01:three_prime_UTR
GTTCAGGGTTACTTTGATGA+CGG 0.575179 6:-56447272 None:intergenic
GCTCAACATTCCACTCGGTA+CGG 0.575771 6:+56446831 MsG0680033089.01.T01:CDS
TGCGTTTAATGGTGCTGCCG+TGG 0.577990 6:-56446704 None:intergenic
TTTGATACTAGATCGTTTGG+AGG 0.579262 6:+56450185 MsG0680033089.01.T01:intron
CTGAGTTCACTCGGTGCCGG+AGG 0.583651 6:+56447132 MsG0680033089.01.T01:CDS
TGTGCAATCATTCCAAGAGA+AGG 0.588851 6:+56455824 MsG0680033089.01.T01:CDS
TTGGACTAATTCATGGAGGT+GGG 0.589620 6:-56446089 None:intergenic
GAACCACAAGTCGGCCTAAG+GGG 0.590064 6:+56446980 MsG0680033089.01.T01:CDS
TAATCCGGTGAGGGTAGTTG+CGG 0.591971 6:-56445993 None:intergenic
GACTTGTGGTTCCTGATGTG+TGG 0.592772 6:-56446969 None:intergenic
GAAACCGCAACTACCCTCAC+CGG 0.595143 6:+56445989 MsG0680033089.01.T01:CDS
TGAGAACCTCGATGGTGTTG+GGG 0.598931 6:-56446174 None:intergenic
TCGTTTGGAGGAAGCATTTG+GGG 0.603871 6:+56450197 MsG0680033089.01.T01:CDS
TGGTTCCCACAAAGCTGGGT+CGG 0.604698 6:+56450290 MsG0680033089.01.T01:CDS
ACACATCAAATGAGTAGCCT+CGG 0.610447 6:-56450247 None:intergenic
GGAGATGAGATGATTGGCAG+CGG 0.610520 6:-56446113 None:intergenic
CGTGGCTCGGACTCGAATCA+CGG 0.622364 6:-56446686 None:intergenic
CCAAATTGTGCTGACTCAGT+GGG 0.623559 6:-56447005 None:intergenic
AGATCAGAAATACGGTGAAG+AGG 0.624099 6:+56451554 MsG0680033089.01.T01:CDS
CTACGTCTGGATGTGCCAGA+AGG 0.625073 6:-56451506 None:intergenic
AACCTCGATGGTGTTGGGGA+AGG 0.626421 6:-56446170 None:intergenic
GGAAGCTTATGCTATGACCG+AGG 0.627079 6:+56450230 MsG0680033089.01.T01:CDS
CGTGATTCGAGTCCGAGCCA+CGG 0.630675 6:+56446687 MsG0680033089.01.T01:CDS
AATGTTGAGCTTTGAAGCTG+CGG 0.631417 6:-56446818 None:intergenic
TGAGATTATGAGAACCTCGA+TGG 0.631642 6:-56446182 None:intergenic
ATCGTTGGGTTTGATTCCAG+CGG 0.634347 6:-56446134 None:intergenic
CTCGGACTCGAATCACGGCA+AGG 0.637388 6:-56446681 None:intergenic
AACCACAAGTCGGCCTAAGG+GGG 0.637615 6:+56446981 MsG0680033089.01.T01:CDS
TTGAAGGAAACCGTACCGAG+TGG 0.648170 6:-56446841 None:intergenic
GGATTGGAGTAATCCGGTGA+GGG 0.654254 6:-56446002 None:intergenic
AAGGAGCTCATCAATAGAGG+AGG 0.664962 6:+56450534 MsG0680033089.01.T01:CDS
GGAGGCTGATGTTAACGGCG+AGG 0.666153 6:+56450368 MsG0680033089.01.T01:CDS
CGGATTGGAGTAATCCGGTG+AGG 0.669022 6:-56446003 None:intergenic
TGAATCGGGTCGGATTATGG+AGG 0.679155 6:+56450350 MsG0680033089.01.T01:CDS
TCAAAGCTCAACATTCCACT+CGG 0.680518 6:+56446826 MsG0680033089.01.T01:CDS
CGGCGACGGAGATGGCACGA+CGG 0.685641 6:-56446045 None:intergenic
CACCTTCCCCAACACCATCG+AGG 0.689921 6:+56446168 MsG0680033089.01.T01:CDS
ACACATCAGGAACCACAAGT+CGG 0.690817 6:+56446971 MsG0680033089.01.T01:CDS
ACGACGTAAAATCTTGCCAG+TGG 0.697504 6:-56455950 None:intergenic
CATTAACGAACCATCCGACG+TGG 0.710386 6:+56446936 MsG0680033089.01.T01:CDS
CGGATTGGACTAATTCATGG+AGG 0.726280 6:-56446093 None:intergenic
AGGAACCGCCGTGTACCACG+TGG 0.735418 6:-56447226 None:intergenic
TAATGCCACGTGGTACACGG+CGG 0.739866 6:+56447221 MsG0680033089.01.T01:CDS
TGATTCAATATAATGCCACG+TGG 0.785240 6:+56447211 MsG0680033089.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACTATTAAAATTAAGTA+AGG - Chr6:56453748-56453767 None:intergenic 10.0%
!! CATTAAAAAAAAATAGAAAA+TGG - Chr6:56448490-56448509 None:intergenic 10.0%
!! CATTAAATAATTTATGTATT+TGG + Chr6:56447586-56447605 MsG0680033089.01.T01:intron 10.0%
!! GAAATTTAAAAATACTTTAA+GGG + Chr6:56452312-56452331 MsG0680033089.01.T01:intron 10.0%
!! TATTCATTTATTTATGTAAT+AGG + Chr6:56448611-56448630 MsG0680033089.01.T01:intron 10.0%
!! TATTCTGTATATATTATATT+TGG + Chr6:56455685-56455704 MsG0680033089.01.T01:intron 10.0%
!! TGAAAAAATAAAATAAAAGT+GGG + Chr6:56451066-56451085 MsG0680033089.01.T01:intron 10.0%
!! TGAAATTTAAAAATACTTTA+AGG + Chr6:56452311-56452330 MsG0680033089.01.T01:intron 10.0%
!! TTATATATTTGATCAATAAA+GGG + Chr6:56456032-56456051 MsG0680033089.01.T01:three_prime_UTR 10.0%
!! TTGAAAAAATAAAATAAAAG+TGG + Chr6:56451065-56451084 MsG0680033089.01.T01:intron 10.0%
!!! AATTTTTATTAGTTTTACTT+TGG + Chr6:56452003-56452022 MsG0680033089.01.T01:intron 10.0%
!!! ATATATACAGATATTTTTTT+AGG + Chr6:56448061-56448080 MsG0680033089.01.T01:intron 10.0%
!!! ATATGTAAATTTTTTTTTCT+AGG + Chr6:56454129-56454148 MsG0680033089.01.T01:intron 10.0%
!!! ATTTTTTTATATTAGAAGAA+AGG + Chr6:56453674-56453693 MsG0680033089.01.T01:intron 10.0%
!!! TAAATACTTAAAAATGATTT+TGG - Chr6:56455042-56455061 None:intergenic 10.0%
!!! TATATACAGATATTTTTTTA+GGG + Chr6:56448062-56448081 MsG0680033089.01.T01:intron 10.0%
!!! TATGTAAATTTTTTTTTCTA+GGG + Chr6:56454130-56454149 MsG0680033089.01.T01:intron 10.0%
!!! TATTAAACTATTTTCTTTTA+GGG - Chr6:56454232-56454251 None:intergenic 10.0%
!!! TCTACATTTAATTTATTTTT+GGG + Chr6:56450825-56450844 MsG0680033089.01.T01:intron 10.0%
!!! TTAATTTTTGTTTTTAACAA+TGG - Chr6:56451679-56451698 None:intergenic 10.0%
!!! TTTTTTTATATTAGAAGAAA+GGG + Chr6:56453675-56453694 MsG0680033089.01.T01:intron 10.0%
!! AAAAAAAGTTATTATTGCAT+TGG - Chr6:56449027-56449046 None:intergenic 15.0%
!! AAAAATAACAACTATATACT+AGG + Chr6:56449541-56449560 MsG0680033089.01.T01:intron 15.0%
!! AAATGATTCTTATTAACTAT+TGG + Chr6:56453024-56453043 MsG0680033089.01.T01:intron 15.0%
!! AAATTAACCAATAGTTAATA+AGG + Chr6:56449103-56449122 MsG0680033089.01.T01:intron 15.0%
!! AAATTATCCTTATTAACTAT+TGG - Chr6:56449113-56449132 None:intergenic 15.0%
!! AAGCATAAATTAAACAAATT+TGG - Chr6:56453820-56453839 None:intergenic 15.0%
!! AATAGTTAATAAGAATCATT+TGG - Chr6:56453025-56453044 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + Chr6:56449112-56449131 MsG0680033089.01.T01:intron 15.0%
!! AATAGTTAGTTATATTTAGA+GGG + Chr6:56450018-56450037 MsG0680033089.01.T01:intron 15.0%
!! AATTATTTATCTAGTAGTAA+AGG + Chr6:56451894-56451913 MsG0680033089.01.T01:intron 15.0%
!! ACTTGTCAAAAAAAAAATTT+GGG - Chr6:56451868-56451887 None:intergenic 15.0%
!! AGAAAAAATTATTATTGCAT+TGG + Chr6:56453111-56453130 MsG0680033089.01.T01:intron 15.0%
!! AGATATAAGTAACAAAAATA+TGG - Chr6:56453939-56453958 None:intergenic 15.0%
!! ATTAAAATTCATAGAAACTA+GGG - Chr6:56453647-56453666 None:intergenic 15.0%
!! ATTAAATCAATAATACATGT+TGG - Chr6:56447964-56447983 None:intergenic 15.0%
!! CTTATATATTTGATCAATAA+AGG + Chr6:56456031-56456050 MsG0680033089.01.T01:three_prime_UTR 15.0%
!! GTATTCTGTATATATTATAT+TGG + Chr6:56455684-56455703 MsG0680033089.01.T01:intron 15.0%
!! TAAAATTAAGATAAAAGCTA+CGG + Chr6:56454941-56454960 MsG0680033089.01.T01:intron 15.0%
!! TAATACAATTACAGAAAATT+TGG + Chr6:56446588-56446607 MsG0680033089.01.T01:intron 15.0%
!! TAATAGTTAGTTATATTTAG+AGG + Chr6:56450017-56450036 MsG0680033089.01.T01:intron 15.0%
!! TAATTATATACTATGTTAAG+AGG + Chr6:56456109-56456128 MsG0680033089.01.T01:three_prime_UTR 15.0%
!! TATATATTTGATCAATAAAG+GGG + Chr6:56456033-56456052 MsG0680033089.01.T01:three_prime_UTR 15.0%
!! TCTAAAAGTAAATATACAAA+CGG - Chr6:56449891-56449910 None:intergenic 15.0%
!! TGAAGTTATTATCATTAATA+AGG - Chr6:56455167-56455186 None:intergenic 15.0%
!! TTATATTTAAGAGATTGAAT+TGG - Chr6:56446306-56446325 None:intergenic 15.0%
!! TTTACTACTAGATAAATAAT+TGG - Chr6:56451895-56451914 None:intergenic 15.0%
!! TTTCTCTATAGTTTATTAAA+TGG - Chr6:56449771-56449790 None:intergenic 15.0%
!!! AAAAGCATTATGTTTTTAAA+TGG + Chr6:56448540-56448559 MsG0680033089.01.T01:intron 15.0%
!!! AATAGAAAACTTTGATTTTT+AGG + Chr6:56450706-56450725 MsG0680033089.01.T01:intron 15.0%
!!! AATTTTTTATCAGTCTAAAT+TGG + Chr6:56451001-56451020 MsG0680033089.01.T01:intron 15.0%
!!! ATAATTTATGTATTTGGTTT+AGG + Chr6:56447592-56447611 MsG0680033089.01.T01:intron 15.0%
!!! ATATACAGATATTTTTTTAG+GGG + Chr6:56448063-56448082 MsG0680033089.01.T01:intron 15.0%
!!! ATTTAACGTTGTTTTTAAAT+TGG + Chr6:56447469-56447488 MsG0680033089.01.T01:intron 15.0%
!!! ATTTTATTGACATTCAAAAT+AGG + Chr6:56450047-56450066 MsG0680033089.01.T01:intron 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG - Chr6:56448987-56449006 None:intergenic 15.0%
!!! CTATTAAACTATTTTCTTTT+AGG - Chr6:56454233-56454252 None:intergenic 15.0%
!!! CTCTACATTTAATTTATTTT+TGG + Chr6:56450824-56450843 MsG0680033089.01.T01:intron 15.0%
!!! TAAACAAATTTATTTTAGCA+GGG + Chr6:56454098-56454117 MsG0680033089.01.T01:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + Chr6:56453048-56453067 MsG0680033089.01.T01:intron 15.0%
!!! TATTATTCATTTATTTTCCT+AGG + Chr6:56452833-56452852 MsG0680033089.01.T01:intron 15.0%
!!! TTAAACAAATTTATTTTAGC+AGG + Chr6:56454097-56454116 MsG0680033089.01.T01:intron 15.0%
!!! TTTGTGAATATTTTTTTCTA+CGG - Chr6:56448014-56448033 None:intergenic 15.0%
!!! TTTTAGATCTAAAAATGTTA+TGG - Chr6:56453235-56453254 None:intergenic 15.0%
!! AAAAAAAATAGAAAATGGCA+AGG - Chr6:56448485-56448504 None:intergenic 20.0%
!! AAAATAAAGATATGTTATGG+TGG + Chr6:56448091-56448110 MsG0680033089.01.T01:intron 20.0%
!! AAAGAAAAATTGAGTAAACA+AGG + Chr6:56455530-56455549 MsG0680033089.01.T01:intron 20.0%
!! AAATAAAAAACATGAAAGTG+AGG + Chr6:56454910-56454929 MsG0680033089.01.T01:intron 20.0%
!! AAATGTTATGGTCTAATTAA+TGG - Chr6:56453223-56453242 None:intergenic 20.0%
!! AAATTAACTAGTTAGAATAG+AGG + Chr6:56446479-56446498 MsG0680033089.01.T01:intron 20.0%
!! AAATTGTTAGAAACAAAAGT+AGG + Chr6:56451031-56451050 MsG0680033089.01.T01:intron 20.0%
!! AAGAAAAATTGAGTAAACAA+GGG + Chr6:56455531-56455550 MsG0680033089.01.T01:intron 20.0%
!! AATAAAACATACAAATGACT+TGG - Chr6:56451973-56451992 None:intergenic 20.0%
!! AATAGAAACATGTTAGAAAA+TGG - Chr6:56452355-56452374 None:intergenic 20.0%
!! AATGATTAAGAGAAAGATAA+TGG + Chr6:56452991-56453010 MsG0680033089.01.T01:intron 20.0%
!! AATTAACTAGTTAGAATAGA+GGG + Chr6:56446480-56446499 MsG0680033089.01.T01:intron 20.0%
!! AATTTCTTATTAGCTAAACT+TGG + Chr6:56454349-56454368 MsG0680033089.01.T01:intron 20.0%
!! ATAGAAACATGTTAGAAAAT+GGG - Chr6:56452354-56452373 None:intergenic 20.0%
!! CAGAAAATAAAGATATGTTA+TGG + Chr6:56448088-56448107 MsG0680033089.01.T01:intron 20.0%
!! CTAAAAGTAAATATACAAAC+GGG - Chr6:56449890-56449909 None:intergenic 20.0%
!! GACTTGTCAAAAAAAAAATT+TGG - Chr6:56451869-56451888 None:intergenic 20.0%
!! GATTAAAATTCATAGAAACT+AGG - Chr6:56453648-56453667 None:intergenic 20.0%
!! TATTTGTTTAAATTAGTGAC+CGG + Chr6:56451784-56451803 MsG0680033089.01.T01:intron 20.0%
!! TTGCTAGAAATGAATATAAA+GGG - Chr6:56449383-56449402 None:intergenic 20.0%
!! TTTAATCTCTTAAATTGCAA+AGG - Chr6:56452200-56452219 None:intergenic 20.0%
!! TTTGCTAGAAATGAATATAA+AGG - Chr6:56449384-56449403 None:intergenic 20.0%
!!! AAAAATTGATAATGTGGTAT+TGG + Chr6:56449401-56449420 MsG0680033089.01.T01:intron 20.0%
!!! AAAACTTTGATTTTTAGGTT+TGG + Chr6:56450711-56450730 MsG0680033089.01.T01:intron 20.0%
!!! AAACTTTGATTTTTAGGTTT+GGG + Chr6:56450712-56450731 MsG0680033089.01.T01:intron 20.0%
!!! AATAACTTCAAAAGCATTTA+GGG + Chr6:56455177-56455196 MsG0680033089.01.T01:intron 20.0%
!!! AATATGCTGTCTTTTTTTAA+CGG - Chr6:56451312-56451331 None:intergenic 20.0%
!!! ATCGTTATTTATTTCTGTTT+AGG + Chr6:56451217-56451236 MsG0680033089.01.T01:intron 20.0%
!!! ATTTGTCTTTTATTCTTCAT+GGG - Chr6:56446336-56446355 None:intergenic 20.0%
!!! CATTTTCTAACACTTTTTAT+AGG + Chr6:56451926-56451945 MsG0680033089.01.T01:intron 20.0%
!!! GTAAATTGTTTCTTGTAAAT+AGG - Chr6:56447556-56447575 None:intergenic 20.0%
!!! GTCATTTGTATGTTTTATTT+TGG + Chr6:56451974-56451993 MsG0680033089.01.T01:intron 20.0%
!!! TAATAACTTCAAAAGCATTT+AGG + Chr6:56455176-56455195 MsG0680033089.01.T01:intron 20.0%
!!! TATAGGTGAAAATATAGTTT+TGG + Chr6:56451943-56451962 MsG0680033089.01.T01:intron 20.0%
!!! TATTTGAAAAACTTTTCTCT+GGG + Chr6:56449944-56449963 MsG0680033089.01.T01:intron 20.0%
!!! TCACATATTCCATATTTTTA+CGG + Chr6:56448682-56448701 MsG0680033089.01.T01:intron 20.0%
!!! TCTTTGTTTATAAATATGAC+TGG - Chr6:56455635-56455654 None:intergenic 20.0%
!!! TGAAATTTTTGTTTCTTCTT+CGG - Chr6:56446872-56446891 None:intergenic 20.0%
!!! TTACTCAATTTTTCTTTTTG+CGG - Chr6:56455527-56455546 None:intergenic 20.0%
!!! TTATTTGAAAAACTTTTCTC+TGG + Chr6:56449943-56449962 MsG0680033089.01.T01:intron 20.0%
!!! TTCTAGAAAATTTCTAATAG+AGG + Chr6:56451417-56451436 MsG0680033089.01.T01:intron 20.0%
!!! TTTCTAACATGTTTCTATTA+GGG + Chr6:56452356-56452375 MsG0680033089.01.T01:intron 20.0%
!!! TTTTAGGGTAAATATGTTTT+TGG - Chr6:56454217-56454236 None:intergenic 20.0%
!!! TTTTCTAACATGTTTCTATT+AGG + Chr6:56452355-56452374 MsG0680033089.01.T01:intron 20.0%
! AAAACTACAGAAGTTAAGAA+TGG - Chr6:56447932-56447951 None:intergenic 25.0%
! AAAATCAAATGTGAGAAGAA+TGG + Chr6:56449989-56450008 MsG0680033089.01.T01:intron 25.0%
! AAAGTTGTATAGAGATCAAA+TGG - Chr6:56454383-56454402 None:intergenic 25.0%
! AAATATACAAACGGGAATAA+GGG - Chr6:56449882-56449901 None:intergenic 25.0%
! AAGTAAATGTTAAACTGTGT+TGG + Chr6:56447816-56447835 MsG0680033089.01.T01:intron 25.0%
! AATTTCATAGAAAAAGAGAG+AGG - Chr6:56447387-56447406 None:intergenic 25.0%
! ACATTATCGAATTTCATGAT+TGG - Chr6:56448251-56448270 None:intergenic 25.0%
! ACTATTTACCTGTCTATATA+GGG - Chr6:56449848-56449867 None:intergenic 25.0%
! AGTAAAAGGAAAGATAGTAT+AGG - Chr6:56448847-56448866 None:intergenic 25.0%
! AGTGTCTAATGTTTGTAATA+AGG - Chr6:56452093-56452112 None:intergenic 25.0%
! CCCAAATTTCAAAAAACTTT+CGG - Chr6:56448337-56448356 None:intergenic 25.0%
! CTATATAGGGTTTACAATTT+GGG - Chr6:56449835-56449854 None:intergenic 25.0%
! CTTCTTTCTATTTCAATCTA+AGG - Chr6:56453319-56453338 None:intergenic 25.0%
! CTTTGATGTCTTTCTTATTA+AGG + Chr6:56455227-56455246 MsG0680033089.01.T01:intron 25.0%
! GTAAAAGGAAAGATAGTATA+GGG - Chr6:56448846-56448865 None:intergenic 25.0%
! GTCATTTAAATGAAACTCTT+GGG - Chr6:56448892-56448911 None:intergenic 25.0%
! GTGTTAAGAACGTTATTAAA+AGG + Chr6:56453874-56453893 MsG0680033089.01.T01:intron 25.0%
! TAAATATACAAACGGGAATA+AGG - Chr6:56449883-56449902 None:intergenic 25.0%
! TATGATATGCGTATTATTGT+TGG - Chr6:56446436-56446455 None:intergenic 25.0%
! TCATGTAAAGGGAAAATAAT+TGG - Chr6:56449354-56449373 None:intergenic 25.0%
! TCATTGATATTTCCTTGATT+TGG + Chr6:56450774-56450793 MsG0680033089.01.T01:intron 25.0%
! TCATTTAAATGAAACTCTTG+GGG - Chr6:56448891-56448910 None:intergenic 25.0%
! TCCTCTTTAAATTACATTCT+CGG - Chr6:56452722-56452741 None:intergenic 25.0%
! TCTATATAGGGTTTACAATT+TGG - Chr6:56449836-56449855 None:intergenic 25.0%
! TGAAAATGTCAGAATTCAAT+AGG + Chr6:56446385-56446404 MsG0680033089.01.T01:intron 25.0%
! TGTTTATAAATATGACTGGA+GGG - Chr6:56455631-56455650 None:intergenic 25.0%
! TTAAAAACAACGTTAAATGC+TGG - Chr6:56447467-56447486 None:intergenic 25.0%
! TTATAAATGTCAAGACACTT+TGG - Chr6:56452245-56452264 None:intergenic 25.0%
! TTGTTTATAAATATGACTGG+AGG - Chr6:56455632-56455651 None:intergenic 25.0%
! TTTAACTGTTATGTATTGTC+AGG + Chr6:56455398-56455417 MsG0680033089.01.T01:intron 25.0%
!! AATAAGTCAGCATTTTTGTT+TGG + Chr6:56450444-56450463 MsG0680033089.01.T01:CDS 25.0%
!! CAAGTTTAAAACACTATGAA+AGG - Chr6:56454036-56454055 None:intergenic 25.0%
!! GATTTGTCTTTTATTCTTCA+TGG - Chr6:56446337-56446356 None:intergenic 25.0%
!! GTAATGTGTAGAGTATTAAT+TGG + Chr6:56453073-56453092 MsG0680033089.01.T01:intron 25.0%
!! GTTGCAAATGATAGATATTT+TGG - Chr6:56452127-56452146 None:intergenic 25.0%
!! GTTTTATGTTTGTAACTGAA+AGG - Chr6:56452061-56452080 None:intergenic 25.0%
!! TGTCATTTAAATGAAACTCT+TGG - Chr6:56448893-56448912 None:intergenic 25.0%
!! TTCAAGTTCTTACTTCTTAA+TGG + Chr6:56453266-56453285 MsG0680033089.01.T01:intron 25.0%
!! TTTCTATTTCAATCTAAGGT+GGG - Chr6:56453315-56453334 None:intergenic 25.0%
!! TTTTGATGTGTTAGCATTTA+CGG - Chr6:56452688-56452707 None:intergenic 25.0%
!! TTTTGCAAATCACAAATTTG+CGG + Chr6:56455591-56455610 MsG0680033089.01.T01:intron 25.0%
!!! AAAAGTGTTAGAAAATGCAT+TGG - Chr6:56451923-56451942 None:intergenic 25.0%
!!! AAACGACACTCATTTTAAAA+CGG - Chr6:56449214-56449195 None:intergenic 25.0%
!!! AATTTTTGCGATGTTTTTTC+CGG - Chr6:56453904-56453923 None:intergenic 25.0%
!!! ACATATTCCATATTTTTACG+GGG + Chr6:56448684-56448703 MsG0680033089.01.T01:intron 25.0%
!!! ACCGAAAGTTTTTTGAAATT+TGG + Chr6:56448333-56448352 MsG0680033089.01.T01:intron 25.0%
!!! ATAAACAAAGACTACTTTTC+AGG + Chr6:56455644-56455663 MsG0680033089.01.T01:intron 25.0%
!!! ATCAATCCATTTTTTTGTGT+TGG - Chr6:56446548-56446567 None:intergenic 25.0%
!!! CACATATTCCATATTTTTAC+GGG + Chr6:56448683-56448702 MsG0680033089.01.T01:intron 25.0%
!!! CCGAAAGTTTTTTGAAATTT+GGG + Chr6:56448334-56448353 MsG0680033089.01.T01:intron 25.0%
!!! GATTTGCTGTTAGAAAATTA+TGG - Chr6:56448520-56448539 None:intergenic 25.0%
!!! TCTAGCAAAAATTGATAATG+TGG + Chr6:56449395-56449414 MsG0680033089.01.T01:intron 25.0%
!!! TTTAAAATGAGTGTCGTTTT+AGG + Chr6:56452943-56452962 MsG0680033089.01.T01:intron 25.0%
!!! TTTAAAATGAGTGTCGTTTT+AGG - Chr6:56452962-56452943 None:intergenic 25.0%
!!! TTTAGCCTTATCAATTTTTC+AGG + Chr6:56451450-56451469 MsG0680033089.01.T01:intron 25.0%
!!! TTTTCTTTTTTTCATGAGTG+AGG + Chr6:56454646-56454665 MsG0680033089.01.T01:intron 25.0%
AAAAGAACACTGGAAATAGT+AGG - Chr6:56454432-56454451 None:intergenic 30.0%
AAACTATCCCCGTAAAAATA+TGG - Chr6:56448694-56448713 None:intergenic 30.0%
AAGGGACAAAATGTTACAAA+AGG + Chr6:56450399-56450418 MsG0680033089.01.T01:CDS 30.0%
AAGTAAAGACTAGACTTAGA+AGG + Chr6:56454174-56454193 MsG0680033089.01.T01:intron 30.0%
AAGTAACATCTGTACTGTAA+TGG - Chr6:56454623-56454642 None:intergenic 30.0%
AAGTAAGGACTAAACTTACA+AGG - Chr6:56453733-56453752 None:intergenic 30.0%
AATATAATCTGGTGTATGGT+AGG - Chr6:56447249-56447268 None:intergenic 30.0%
ACATTTACGTTAAGTTTACC+AGG + Chr6:56447861-56447880 MsG0680033089.01.T01:intron 30.0%
ACCGAGAATGTAATTTAAAG+AGG + Chr6:56452718-56452737 MsG0680033089.01.T01:intron 30.0%
ACCTTTGATGTGATATCTAT+TGG - Chr6:56454555-56454574 None:intergenic 30.0%
AGAATCACGTAAACACATAT+GGG - Chr6:56455281-56455300 None:intergenic 30.0%
ATATATAAGCTTCCAAAGCT+AGG - Chr6:56456020-56456039 None:intergenic 30.0%
ATCAAATATTGATGCTGAAG+AGG + Chr6:56455847-56455866 MsG0680033089.01.T01:CDS 30.0%
ATTGGAGGGATATAGTATTA+AGG - Chr6:56450872-56450891 None:intergenic 30.0%
ATTGTAAACCCTATATAGAC+AGG + Chr6:56449837-56449856 MsG0680033089.01.T01:intron 30.0%
CAAACAAAACAAAAGAACAC+TGG - Chr6:56454442-56454461 None:intergenic 30.0%
CAAACTAAAATTCTTGATCC+TGG + Chr6:56452643-56452662 MsG0680033089.01.T01:intron 30.0%
CCAACATAACAATTAAACTC+CGG - Chr6:56451806-56451825 None:intergenic 30.0%
CCTTTGATGTGATATCTATT+GGG - Chr6:56454554-56454573 None:intergenic 30.0%
CTCTATAAATAGAACCATTC+CGG - Chr6:56453560-56453579 None:intergenic 30.0%
CTTTAAATTACATTCTCGGT+CGG - Chr6:56452718-56452737 None:intergenic 30.0%
CTTTCTATTTCAATCTAAGG+TGG - Chr6:56453316-56453335 None:intergenic 30.0%
CTTTCTCTTGTAAATAGAAC+CGG + Chr6:56447660-56447679 MsG0680033089.01.T01:intron 30.0%
CTTTGATGTGATATCTATTG+GGG - Chr6:56454553-56454572 None:intergenic 30.0%
GAAAATATCACCAATTGAAG+TGG + Chr6:56451476-56451495 MsG0680033089.01.T01:CDS 30.0%
GACTATTTACCTGTCTATAT+AGG - Chr6:56449849-56449868 None:intergenic 30.0%
GGTAGAAATTTATGAAAGTG+TGG + Chr6:56452462-56452481 MsG0680033089.01.T01:intron 30.0%
GGTTCTATTTATAGAGTCAT+CGG + Chr6:56453564-56453583 MsG0680033089.01.T01:intron 30.0%
GTATAGGGAATGAAAAGTAA+AGG - Chr6:56448831-56448850 None:intergenic 30.0%
GTATTTGATACTAGATCGTT+TGG + Chr6:56450182-56450201 MsG0680033089.01.T01:intron 30.0%
TAAAAGCCAAATTGATCTCA+TGG + Chr6:56454682-56454701 MsG0680033089.01.T01:intron 30.0%
TAATGTAACAAAAGAACCCT+CGG + Chr6:56448265-56448284 MsG0680033089.01.T01:intron 30.0%
TACCATACACCAGATTATAT+TGG + Chr6:56447248-56447267 MsG0680033089.01.T01:CDS 30.0%
TATATAAGCTTCCAAAGCTA+GGG - Chr6:56456019-56456038 None:intergenic 30.0%
TATTTGATCAATAAAGGGGT+TGG + Chr6:56456037-56456056 MsG0680033089.01.T01:three_prime_UTR 30.0%
TCAATATTTGATCCTTCTCT+TGG - Chr6:56455839-56455858 None:intergenic 30.0%
TCTACTACTTAACAAAGACA+AGG + Chr6:56449566-56449585 MsG0680033089.01.T01:intron 30.0%
TCTCTCCTGAAAAATTGATA+AGG - Chr6:56451458-56451477 None:intergenic 30.0%
TCTTCATTCAAAAACAGCAA+TGG + Chr6:56445967-56445986 MsG0680033089.01.T01:exon 30.0%
TGATGAATATGAATGGAGAT+TGG - Chr6:56445935-56445954 None:intergenic 30.0%
TTGAATGAAGAAGATGTTTG+TGG - Chr6:56445958-56445977 None:intergenic 30.0%
TTGGAGGGATATAGTATTAA+GGG - Chr6:56450871-56450890 None:intergenic 30.0%
TTGGTAAAAGTGAAAGTGAA+AGG - Chr6:56448757-56448776 None:intergenic 30.0%
TTGTATTAAAATACTCCCTC+CGG - Chr6:56447682-56447701 None:intergenic 30.0%
TTTAAATTACATTCTCGGTC+GGG - Chr6:56452717-56452736 None:intergenic 30.0%
! AAAACATACAAATGACTTGG+TGG - Chr6:56451970-56451989 None:intergenic 30.0%
! AAATTTATGAAAGTGTGGTC+GGG + Chr6:56452467-56452486 MsG0680033089.01.T01:intron 30.0%
! AAATTTGGGATTCCATAGTT+TGG + Chr6:56448348-56448367 MsG0680033089.01.T01:intron 30.0%
! AATCGGTAATGAAACCTTTT+TGG - Chr6:56455915-56455934 None:intergenic 30.0%
! AGCCTTATATTTACAAGTTG+TGG + Chr6:56455105-56455124 MsG0680033089.01.T01:intron 30.0%
! ATCGGTAATGAAACCTTTTT+GGG - Chr6:56455914-56455933 None:intergenic 30.0%
! ATGTGTAGAGTATTAATTGG+AGG + Chr6:56453076-56453095 MsG0680033089.01.T01:intron 30.0%
! ATTGGTTACTTTGATTCTGA+TGG + Chr6:56450486-56450505 MsG0680033089.01.T01:CDS 30.0%
! GAAACATTGAATCGGTTTAT+CGG + Chr6:56447040-56447059 MsG0680033089.01.T01:CDS 30.0%
! GAAATTTATGAAAGTGTGGT+CGG + Chr6:56452466-56452485 MsG0680033089.01.T01:intron 30.0%
! TAGAAAGTGAGATGATTTGT+TGG - Chr6:56448785-56448804 None:intergenic 30.0%
! TATTTTCCCTTTACATGACT+TGG + Chr6:56449356-56449375 MsG0680033089.01.T01:intron 30.0%
! TGCTTTAGATCTGGATAATT+TGG + Chr6:56453589-56453608 MsG0680033089.01.T01:intron 30.0%
! TGTGACCAAACCAAAATTTT+TGG - Chr6:56452532-56452551 None:intergenic 30.0%
! TGTGTAGAGTATTAATTGGA+GGG + Chr6:56453077-56453096 MsG0680033089.01.T01:intron 30.0%
! TTGGTTACTTTGATTCTGAT+GGG + Chr6:56450487-56450506 MsG0680033089.01.T01:CDS 30.0%
! TTGTTTCTTGTAAATAGGAC+CGG - Chr6:56447551-56447570 None:intergenic 30.0%
! TTTGATGATTCTTGTGAAGT+GGG + Chr6:56456137-56456156 MsG0680033089.01.T01:three_prime_UTR 30.0%
! TTTGTGGTGATGAATATGAA+TGG - Chr6:56445942-56445961 None:intergenic 30.0%
!! AATGGCTATTTTGGATGAAT+CGG + Chr6:56450335-56450354 MsG0680033089.01.T01:CDS 30.0%
!! AGAAAGTGAGATGATTTGTT+GGG - Chr6:56448784-56448803 None:intergenic 30.0%
!! GAAGTTTTATGTGCTATTCT+AGG - Chr6:56451123-56451142 None:intergenic 30.0%
!! TTCCTCTTTTTCATGTTCAT+GGG + Chr6:56447094-56447113 MsG0680033089.01.T01:CDS 30.0%
!! TTTTGATGATTCTTGTGAAG+TGG + Chr6:56456136-56456155 MsG0680033089.01.T01:three_prime_UTR 30.0%
!!! ATGAGATCAATTTGGCTTTT+AGG - Chr6:56454683-56454702 None:intergenic 30.0%
!!! CAAACCAAAATTTTTGGTCT+TGG - Chr6:56452526-56452545 None:intergenic 30.0%
!!! CAAGACCAAAAATTTTGGTT+TGG + Chr6:56452524-56452543 MsG0680033089.01.T01:intron 30.0%
!!! CAGGATCAAGAATTTTAGTT+TGG - Chr6:56452645-56452664 None:intergenic 30.0%
!!! CTGCATGCTACTATTTTTTT+AGG + Chr6:56451154-56451173 MsG0680033089.01.T01:intron 30.0%
!!! GACACTCATTTTAAAACAGA+GGG + Chr6:56449199-56449218 MsG0680033089.01.T01:intron 30.0%
!!! GAGTGCAGAAATTTTTTGTA+AGG - Chr6:56453777-56453796 None:intergenic 30.0%
!!! TTCTTCTTCGGTTTTATTGA+AGG - Chr6:56446860-56446879 None:intergenic 30.0%
AAACACCAACCTAGAATAAC+CGG - Chr6:56447348-56447367 None:intergenic 35.0%
AACAATAACTGCGTAAGAGA+AGG - Chr6:56453435-56453454 None:intergenic 35.0%
AACCACATTTGTTTATCTCC+TGG - Chr6:56447882-56447901 None:intergenic 35.0%
AACCCATGAACATGAAAAAG+AGG - Chr6:56447099-56447118 None:intergenic 35.0%
AACGTAGAGAATCCAAATCA+AGG - Chr6:56450789-56450808 None:intergenic 35.0%
AACGTTATTAAAAGGTCCTC+CGG + Chr6:56453882-56453901 MsG0680033089.01.T01:intron 35.0%
AATGTAACAAAAGAACCCTC+GGG + Chr6:56448266-56448285 MsG0680033089.01.T01:intron 35.0%
AATTGATCTCATGGTTCTTG+TGG + Chr6:56454691-56454710 MsG0680033089.01.T01:intron 35.0%
ACAATAACTGCGTAAGAGAA+GGG - Chr6:56453434-56453453 None:intergenic 35.0%
ACACACAGAAAAACCATCAA+TGG - Chr6:56453369-56453388 None:intergenic 35.0%
ACGATTGATTAGAGTGAATC+TGG + Chr6:56454405-56454424 MsG0680033089.01.T01:intron 35.0%
ATAGCATAAGCTTCCAAAAC+GGG - Chr6:56450225-56450244 None:intergenic 35.0%
ATGCTAACACATCAAAAACC+AGG + Chr6:56452691-56452710 MsG0680033089.01.T01:intron 35.0%
ATGGAGATTGGAGATGATTA+AGG - Chr6:56445923-56445942 None:intergenic 35.0%
ATGTAACCATGTAGGCTTAA+TGG - Chr6:56453344-56453363 None:intergenic 35.0%
ATTAAGGAGCTCATCAATAG+AGG + Chr6:56450531-56450550 MsG0680033089.01.T01:CDS 35.0%
ATTATGGAGGCTGATGTTAA+CGG + Chr6:56450363-56450382 MsG0680033089.01.T01:CDS 35.0%
ATTGCAAAGGTTACACACTT+TGG - Chr6:56452187-56452206 None:intergenic 35.0%
ATTGGAGATGATTAAGGTCA+GGG - Chr6:56445917-56445936 None:intergenic 35.0%
CAAGAACCATGAGATCAATT+TGG - Chr6:56454691-56454710 None:intergenic 35.0%
CATAGCATAAGCTTCCAAAA+CGG - Chr6:56450226-56450245 None:intergenic 35.0%
CCCAATAGATATCACATCAA+AGG + Chr6:56454551-56454570 MsG0680033089.01.T01:intron 35.0%
CCGGAGTTTAATTGTTATGT+TGG + Chr6:56451803-56451822 MsG0680033089.01.T01:intron 35.0%
CGCCACAACTTGTAAATATA+AGG - Chr6:56455110-56455129 None:intergenic 35.0%
CTTACCTTGCTACAGTATAA+TGG - Chr6:56448377-56448396 None:intergenic 35.0%
CTTCGACCAACACAAAAAAA+TGG + Chr6:56446539-56446558 MsG0680033089.01.T01:intron 35.0%
CTTCTCTTAACACCATTAGA+AGG + Chr6:56446778-56446797 MsG0680033089.01.T01:CDS 35.0%
GAGAATCACGTAAACACATA+TGG - Chr6:56455282-56455301 None:intergenic 35.0%
GCACAGTTTCATATGACTAT+AGG - Chr6:56450929-56450948 None:intergenic 35.0%
GTAAATGAGAAACACTTGTG+TGG + Chr6:56452499-56452518 MsG0680033089.01.T01:intron 35.0%
GTAATCAGGTCGGATTTAAA+CGG + Chr6:56452433-56452452 MsG0680033089.01.T01:intron 35.0%
GTATAATGGCATCCAAACTA+TGG - Chr6:56448363-56448382 None:intergenic 35.0%
GTCCAATATAATCTGGTGTA+TGG - Chr6:56447253-56447272 None:intergenic 35.0%
GTGTCAAAGTGTAAATTCCT+AGG - Chr6:56452853-56452872 None:intergenic 35.0%
TAATCAGGTCGGATTTAAAC+GGG + Chr6:56452434-56452453 MsG0680033089.01.T01:intron 35.0%
TACCAGGAGATAAACAAATG+TGG + Chr6:56447877-56447896 MsG0680033089.01.T01:intron 35.0%
TATAAGGCTCATTGCATGTT+TGG - Chr6:56455094-56455113 None:intergenic 35.0%
TATGAAACTGTGCAGAATTC+TGG + Chr6:56450936-56450955 MsG0680033089.01.T01:intron 35.0%
TGATTCAATATAATGCCACG+TGG + Chr6:56447211-56447230 MsG0680033089.01.T01:CDS 35.0%
TGCACAATGAATCTGTTCAA+AGG - Chr6:56455810-56455829 None:intergenic 35.0%
TGGTTTCATACTGGTGATAT+TGG + Chr6:56450468-56450487 MsG0680033089.01.T01:CDS 35.0%
TGTAACCATGTAGGCTTAAT+GGG - Chr6:56453343-56453362 None:intergenic 35.0%
TTACAAGGTCGCAATTTGTA+GGG - Chr6:56453718-56453737 None:intergenic 35.0%
TTATCAGTCTAAATTGGCTG+CGG + Chr6:56451007-56451026 MsG0680033089.01.T01:intron 35.0%
TTGTGAGTCTCAAGAAAACT+AGG - Chr6:56452803-56452822 None:intergenic 35.0%
TTTGATACTAGATCGTTTGG+AGG + Chr6:56450185-56450204 MsG0680033089.01.T01:intron 35.0%
! AAAGACGAAGACATTAGTCT+TGG - Chr6:56451254-56451273 None:intergenic 35.0%
! ATTTTATTGATCCACTAGCG+AGG - Chr6:56449517-56449536 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG - Chr6:56449064-56449083 None:intergenic 35.0%
! TAGAAGGTCGCAATTTTACA+GGG + Chr6:56454190-56454209 MsG0680033089.01.T01:intron 35.0%
! TAGCAAGGTAAGACTGTTTT+TGG + Chr6:56448385-56448404 MsG0680033089.01.T01:intron 35.0%
! TCAGCACAATTTGGTTTCAT+CGG + Chr6:56447014-56447033 MsG0680033089.01.T01:CDS 35.0%
! TGAGTAAGACTTGTATCGAT+AGG + Chr6:56449451-56449470 MsG0680033089.01.T01:intron 35.0%
! TGGACCAAGACCAAAAATTT+TGG + Chr6:56452519-56452538 MsG0680033089.01.T01:intron 35.0%
! TGTGCAGAGTATTAATTGGA+GGG - Chr6:56449060-56449079 None:intergenic 35.0%
! TTAGAAGGTCGCAATTTTAC+AGG + Chr6:56454189-56454208 MsG0680033089.01.T01:intron 35.0%
! TTTTATTGATCCACTAGCGA+GGG - Chr6:56449516-56449535 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + Chr6:56453141-56453160 MsG0680033089.01.T01:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - Chr6:56453160-56453141 None:intergenic 35.0%
!! AGATGATTTGTTGGGTTGTT+TGG - Chr6:56448776-56448795 None:intergenic 35.0%
!! AGTCAGCATTTTTGTTTGGT+TGG + Chr6:56450448-56450467 MsG0680033089.01.T01:CDS 35.0%
!! ATCGGTTCGAAACATTGAAT+CGG + Chr6:56447032-56447051 MsG0680033089.01.T01:CDS 35.0%
!! ATGGCTATTTTGGATGAATC+GGG + Chr6:56450336-56450355 MsG0680033089.01.T01:CDS 35.0%
!! CTTCCTCTTTTTCATGTTCA+TGG + Chr6:56447093-56447112 MsG0680033089.01.T01:CDS 35.0%
!! GTTTTATGTGCTATTCTAGG+TGG - Chr6:56451120-56451139 None:intergenic 35.0%
!! TTGGCTTTTAGGTAAACGTA+GGG - Chr6:56454672-56454691 None:intergenic 35.0%
!! TTGTTTGGTTGGTTTCATAC+TGG + Chr6:56450459-56450478 MsG0680033089.01.T01:CDS 35.0%
!!! AAGGTAAGACTGTTTTTGGT+GGG + Chr6:56448389-56448408 MsG0680033089.01.T01:intron 35.0%
!!! CGACACTCATTTTAAAACAG+AGG + Chr6:56449198-56449217 MsG0680033089.01.T01:intron 35.0%
!!! GACACTCATTTTAAAACGGA+GGG - Chr6:56452938-56452957 None:intergenic 35.0%
!!! TTTGGCTTTTAGGTAAACGT+AGG - Chr6:56454673-56454692 None:intergenic 35.0%
AAAACTAGGTGGTAGGCATT+GGG - Chr6:56452789-56452808 None:intergenic 40.0%
AAAGGGACCAAGTCATGTAA+AGG - Chr6:56449366-56449385 None:intergenic 40.0%
AACGGCGAGGTTTGTATTAA+GGG + Chr6:56450381-56450400 MsG0680033089.01.T01:CDS 40.0%
AAGGGACCAAGTCATGTAAA+GGG - Chr6:56449365-56449384 None:intergenic 40.0%
ACACATCAAATGAGTAGCCT+CGG - Chr6:56450250-56450269 None:intergenic 40.0%
AGATCAGAAATACGGTGAAG+AGG + Chr6:56451554-56451573 MsG0680033089.01.T01:CDS 40.0%
AGGGAAACTTGGCATATAAG+AGG + Chr6:56456060-56456079 MsG0680033089.01.T01:three_prime_UTR 40.0%
ATATAATGCCACGTGGTACA+CGG + Chr6:56447218-56447237 MsG0680033089.01.T01:CDS 40.0%
ATCTTTCCCTCTTCTCTCTT+TGG - Chr6:56448303-56448322 None:intergenic 40.0%
ATTGGACTAATTCATGGAGG+TGG - Chr6:56446093-56446112 None:intergenic 40.0%
ATTGGGCAAGACATGAAAGT+AGG - Chr6:56452772-56452791 None:intergenic 40.0%
CAACGTTAAATGCTGGATCT+TGG - Chr6:56447460-56447479 None:intergenic 40.0%
CACTACAGCTACGAATAAAC+CGG - Chr6:56447314-56447333 None:intergenic 40.0%
CATGGTTACATCACCATTGA+TGG + Chr6:56453353-56453372 MsG0680033089.01.T01:intron 40.0%
CTACGAATAAACCGGAGTTT+CGG - Chr6:56447306-56447325 None:intergenic 40.0%
CTCTTGTAAATAGAACCGGA+GGG + Chr6:56447664-56447683 MsG0680033089.01.T01:intron 40.0%
CTGTACCTTTCGATAGCATA+TGG - Chr6:56448440-56448459 None:intergenic 40.0%
CTTACAAGGTCGCAATTTGT+AGG - Chr6:56453719-56453738 None:intergenic 40.0%
GATACATGTGACAATGTTCG+TGG - Chr6:56451644-56451663 None:intergenic 40.0%
GATGCCATTATACTGTAGCA+AGG + Chr6:56448370-56448389 MsG0680033089.01.T01:intron 40.0%
GATGGGTATTTGCATCTTGT+GGG + Chr6:56450504-56450523 MsG0680033089.01.T01:CDS 40.0%
GATGTGTATGCTGCGTTTAA+TGG - Chr6:56446718-56446737 None:intergenic 40.0%
GATTGGAGATGATTAAGGTC+AGG - Chr6:56445918-56445937 None:intergenic 40.0%
GGATGTGGAGAGAAAGTAAA+AGG - Chr6:56448861-56448880 None:intergenic 40.0%
GTGATATCTATTGGGGACTT+GGG - Chr6:56454546-56454565 None:intergenic 40.0%
TAACGGCGAGGTTTGTATTA+AGG + Chr6:56450380-56450399 MsG0680033089.01.T01:CDS 40.0%
TAATTCATGGAGGTGGGAAT+GGG - Chr6:56446086-56446105 None:intergenic 40.0%
TACGAATAAACCGGAGTTTC+GGG - Chr6:56447305-56447324 None:intergenic 40.0%
TACGGAGAGAAAATCTTGTG+TGG - Chr6:56452670-56452689 None:intergenic 40.0%
TATCAATCCCAAACGTGTGA+CGG + Chr6:56454288-56454307 MsG0680033089.01.T01:intron 40.0%
TATCAGTCTAAATTGGCTGC+GGG + Chr6:56451008-56451027 MsG0680033089.01.T01:intron 40.0%
TCAAAGCTCAACATTCCACT+CGG + Chr6:56446826-56446845 MsG0680033089.01.T01:CDS 40.0%
TCAAATCCTTTGCCAGAAGA+TGG + Chr6:56450270-56450289 MsG0680033089.01.T01:CDS 40.0%
TCATCAAAGTAACCCTGAAC+CGG + Chr6:56447275-56447294 MsG0680033089.01.T01:CDS 40.0%
TCTCAAGAAAACTAGGTGGT+AGG - Chr6:56452796-56452815 None:intergenic 40.0%
TCTCTTGTAAATAGAACCGG+AGG + Chr6:56447663-56447682 MsG0680033089.01.T01:intron 40.0%
TGAGATTATGAGAACCTCGA+TGG - Chr6:56446185-56446204 None:intergenic 40.0%
TGAGTCTCAAGAAAACTAGG+TGG - Chr6:56452800-56452819 None:intergenic 40.0%
TGATCAATAAAGGGGTTGGA+GGG + Chr6:56456041-56456060 MsG0680033089.01.T01:three_prime_UTR 40.0%
TGTGATATCTATTGGGGACT+TGG - Chr6:56454547-56454566 None:intergenic 40.0%
TGTGCAATCATTCCAAGAGA+AGG + Chr6:56455824-56455843 MsG0680033089.01.T01:CDS 40.0%
TTCTTGTAAATAGGACCGGA+GGG - Chr6:56447547-56447566 None:intergenic 40.0%
TTGATCAATAAAGGGGTTGG+AGG + Chr6:56456040-56456059 MsG0680033089.01.T01:three_prime_UTR 40.0%
TTGGAACCAAAGAGAGAAGA+GGG + Chr6:56448294-56448313 MsG0680033089.01.T01:intron 40.0%
TTGGACTAATTCATGGAGGT+GGG - Chr6:56446092-56446111 None:intergenic 40.0%
TTTCTTGTAAATAGGACCGG+AGG - Chr6:56447548-56447567 None:intergenic 40.0%
! CAAGATTTTACGTCGTCTTG+TGG + Chr6:56455957-56455976 MsG0680033089.01.T01:CDS 40.0%
! CAATGGTGATGTAACCATGT+AGG - Chr6:56453352-56453371 None:intergenic 40.0%
! GAGAAGCTTTGATTCTGAGT+CGG - Chr6:56446764-56446783 None:intergenic 40.0%
! GATGACGGTCCAATATAATC+TGG - Chr6:56447260-56447279 None:intergenic 40.0%
! GATTCTCTGCATCAACGTTT+TGG + Chr6:56447181-56447200 MsG0680033089.01.T01:CDS 40.0%
! GGGTCAAGAAATGGCTATTT+TGG + Chr6:56450326-56450345 MsG0680033089.01.T01:CDS 40.0%
! GTGTGCAGAGTATTAATTGG+AGG - Chr6:56449061-56449080 None:intergenic 40.0%
! GTTCAGGGTTACTTTGATGA+CGG - Chr6:56447275-56447294 None:intergenic 40.0%
! GTTTTGCGGGTGGTTTATTT+CGG - Chr6:56453487-56453506 None:intergenic 40.0%
! TCTTCACCGTATTTCTGATC+TGG - Chr6:56451555-56451574 None:intergenic 40.0%
! TGATGGGTATTTGCATCTTG+TGG + Chr6:56450503-56450522 MsG0680033089.01.T01:CDS 40.0%
! TGCTATCGAAAGGTACAGAA+AGG + Chr6:56448442-56448461 MsG0680033089.01.T01:intron 40.0%
! TTTGGAACCAAAGAGAGAAG+AGG + Chr6:56448293-56448312 MsG0680033089.01.T01:intron 40.0%
! TTTTGCGGGTGGTTTATTTC+GGG - Chr6:56453486-56453505 None:intergenic 40.0%
!! AATGTTGAGCTTTGAAGCTG+CGG - Chr6:56446821-56446840 None:intergenic 40.0%
!! ATCGTTTGGAGGAAGCATTT+GGG + Chr6:56450196-56450215 MsG0680033089.01.T01:CDS 40.0%
!! ATGTTCATGGGTTGATTGCT+GGG + Chr6:56447106-56447125 MsG0680033089.01.T01:CDS 40.0%
!! ATTGATTTGTCGTCCTCGTA+AGG + Chr6:56446503-56446522 MsG0680033089.01.T01:intron 40.0%
!! CTATTTTGGATGAATCGGGT+CGG + Chr6:56450340-56450359 MsG0680033089.01.T01:CDS 40.0%
!! TCATCGGTTTGCTTTAGATC+TGG + Chr6:56453580-56453599 MsG0680033089.01.T01:intron 40.0%
!!! AGGTAAGACTGTTTTTGGTG+GGG + Chr6:56448390-56448409 MsG0680033089.01.T01:intron 40.0%
!!! CAAGGTAAGACTGTTTTTGG+TGG + Chr6:56448388-56448407 MsG0680033089.01.T01:intron 40.0%
!!! CGACACTCATTTTAAAACGG+AGG - Chr6:56452939-56452958 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + Chr6:56453181-56453200 MsG0680033089.01.T01:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - Chr6:56453200-56453181 None:intergenic 40.0%
!!! TTTTGCGATGTTTTTTCCGG+AGG - Chr6:56453901-56453920 None:intergenic 40.0%
AAAGAACCCTCGGGTATGTT+TGG + Chr6:56448275-56448294 MsG0680033089.01.T01:intron 45.0%
AAGAGGGAAAGATAGCTGCA+AGG + Chr6:56448310-56448329 MsG0680033089.01.T01:intron 45.0%
AAGATGGTTCCCACAAAGCT+GGG + Chr6:56450286-56450305 MsG0680033089.01.T01:CDS 45.0%
AAGGAGCTCATCAATAGAGG+AGG + Chr6:56450534-56450553 MsG0680033089.01.T01:CDS 45.0%
AATGCTACCGTCACACGTTT+GGG - Chr6:56454298-56454317 None:intergenic 45.0%
ACACATCAGGAACCACAAGT+CGG + Chr6:56446971-56446990 MsG0680033089.01.T01:CDS 45.0%
ACGACGTAAAATCTTGCCAG+TGG - Chr6:56455953-56455972 None:intergenic 45.0%
AGGACAGCATCCACTTCAAT+TGG - Chr6:56451489-56451508 None:intergenic 45.0%
AGTCATGAAGTCCCTAGCTT+TGG + Chr6:56456005-56456024 MsG0680033089.01.T01:exon 45.0%
ATAACTGCGTAAGAGAAGGG+AGG - Chr6:56453431-56453450 None:intergenic 45.0%
ATAGCCATTTCTTGACCCAC+AGG - Chr6:56450324-56450343 None:intergenic 45.0%
ATCGTTGGGTTTGATTCCAG+CGG - Chr6:56446137-56446156 None:intergenic 45.0%
ATGAGAACCTCGATGGTGTT+GGG - Chr6:56446178-56446197 None:intergenic 45.0%
CCTTTCGATAGCATATGGTG+CGG - Chr6:56448435-56448454 None:intergenic 45.0%
CTAATTCATGGAGGTGGGAA+TGG - Chr6:56446087-56446106 None:intergenic 45.0%
CTGATTACCCGAACAGCAAT+CGG - Chr6:56452421-56452440 None:intergenic 45.0%
GAAAACTAGGTGGTAGGCAT+TGG - Chr6:56452790-56452809 None:intergenic 45.0%
GAAACCTGTGGGTCAAGAAA+TGG + Chr6:56450317-56450336 MsG0680033089.01.T01:CDS 45.0%
GAAGACCCATTAAGCCTACA+TGG + Chr6:56453335-56453354 MsG0680033089.01.T01:intron 45.0%
GAGAAAATCTTGTGTGGACC+AGG - Chr6:56452664-56452683 None:intergenic 45.0%
GAGAGAAGAGAAGAGAGAGA+AGG + Chr6:56452599-56452618 MsG0680033089.01.T01:intron 45.0%
GCTCATCAATAGAGGAGGTA+TGG + Chr6:56450539-56450558 MsG0680033089.01.T01:intron 45.0%
GGTATTTGCATCTTGTGGGT+CGG + Chr6:56450508-56450527 MsG0680033089.01.T01:CDS 45.0%
GTACTAACACATACTCCCTC+CGG + Chr6:56447529-56447548 MsG0680033089.01.T01:intron 45.0%
TAGAAACTAGGGCTGAGCAT+CGG - Chr6:56453636-56453655 None:intergenic 45.0%
TATGAGAACCTCGATGGTGT+TGG - Chr6:56446179-56446198 None:intergenic 45.0%
TGAAACTCTTGGGGTCTGTT+TGG - Chr6:56448882-56448901 None:intergenic 45.0%
TGCGGAAACAAATCTGTGCA+TGG - Chr6:56448417-56448436 None:intergenic 45.0%
TTGGTCGAAGTTTGAACCTC+AGG - Chr6:56446529-56446548 None:intergenic 45.0%
TTGGTTCCAAACATACCCGA+GGG - Chr6:56448284-56448303 None:intergenic 45.0%
! ATGGGTGAGGTCGAATTTTC+CGG - Chr6:56446068-56446087 None:intergenic 45.0%
! CGGATTGGACTAATTCATGG+AGG - Chr6:56446096-56446115 None:intergenic 45.0%
! CGTCAAAACCGATTGCTGTT+CGG + Chr6:56452410-56452429 MsG0680033089.01.T01:intron 45.0%
! CGTCACTCTGCATTGATAGT+TGG + Chr6:56447433-56447452 MsG0680033089.01.T01:intron 45.0%
! GGAGTGCCAGATCAGAAATA+CGG + Chr6:56451546-56451565 MsG0680033089.01.T01:CDS 45.0%
! GTCAAAACCGATTGCTGTTC+GGG + Chr6:56452411-56452430 MsG0680033089.01.T01:intron 45.0%
! TTTGGTTCCAAACATACCCG+AGG - Chr6:56448285-56448304 None:intergenic 45.0%
!! ACCAAATTGTGCTGACTCAG+TGG - Chr6:56447009-56447028 None:intergenic 45.0%
!! ATGGGTTGTGAGTTGATGCT+AGG - Chr6:56455263-56455282 None:intergenic 45.0%
!! CAGCGGATTGGACTAATTCA+TGG - Chr6:56446099-56446118 None:intergenic 45.0%
!! CATGTTCATGGGTTGATTGC+TGG + Chr6:56447105-56447124 MsG0680033089.01.T01:CDS 45.0%
!! CCAAATTGTGCTGACTCAGT+GGG - Chr6:56447008-56447027 None:intergenic 45.0%
!! CGAACAGCAATCGGTTTTGA+CGG - Chr6:56452412-56452431 None:intergenic 45.0%
!! CTCTGCATCAACGTTTTGGA+AGG + Chr6:56447185-56447204 MsG0680033089.01.T01:CDS 45.0%
!! GAACAGCAATCGGTTTTGAC+GGG - Chr6:56452411-56452430 None:intergenic 45.0%
!! GATCGTTTGGAGGAAGCATT+TGG + Chr6:56450195-56450214 MsG0680033089.01.T01:intron 45.0%
!! GGAATTTTTCAGCGACGGAT+TGG - Chr6:56446021-56446040 None:intergenic 45.0%
!! TCGTTTGGAGGAAGCATTTG+GGG + Chr6:56450197-56450216 MsG0680033089.01.T01:CDS 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + Chr6:56453180-56453199 MsG0680033089.01.T01:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - Chr6:56453199-56453180 None:intergenic 45.0%
!!! GCACTTTTTCTCCACACATC+AGG + Chr6:56446958-56446977 MsG0680033089.01.T01:CDS 45.0%
!! AATAAAATGTAAAAAAATTA+AGG + Chr6:56452280-56452299 MsG0680033089.01.T01:intron 5.0%
!! ATAAAATGTAAAAAAATTAA+GGG + Chr6:56452281-56452300 MsG0680033089.01.T01:intron 5.0%
!! TTAAAAAATTTAAAAGTTTA+AGG + Chr6:56454070-56454089 MsG0680033089.01.T01:intron 5.0%
!!! ATTAAAATTAATTTTATCTT+TGG - Chr6:56455001-56455020 None:intergenic 5.0%
!!! TAATTTTAAAAGTAATATTT+TGG - Chr6:56449089-56449108 None:intergenic 5.0%
!!! TTATATACATTATTTTATTT+TGG + Chr6:56450630-56450649 MsG0680033089.01.T01:intron 5.0%
!!! TTGTTAATTATTTATTTTTT+TGG + Chr6:56449912-56449931 MsG0680033089.01.T01:intron 5.0%
AAAGGGGTTGGAGGGAAACT+TGG + Chr6:56456049-56456068 MsG0680033089.01.T01:three_prime_UTR 50.0%
AATCTTGCCAGTGGCTGTCT+TGG - Chr6:56455944-56455963 None:intergenic 50.0%
ATCTTGCCAGTGGCTGTCTT+GGG - Chr6:56455943-56455962 None:intergenic 50.0%
CAATGCTACCGTCACACGTT+TGG - Chr6:56454299-56454318 None:intergenic 50.0%
CATAGTAGCAGCTAGCCATG+AGG - Chr6:56449484-56449503 None:intergenic 50.0%
CATTAACGAACCATCCGACG+TGG + Chr6:56446936-56446955 MsG0680033089.01.T01:CDS 50.0%
CCCACTGAGTCAGCACAATT+TGG + Chr6:56447005-56447024 MsG0680033089.01.T01:CDS 50.0%
CCGCACCATATGCTATCGAA+AGG + Chr6:56448432-56448451 MsG0680033089.01.T01:intron 50.0%
GAAGATGGTTCCCACAAAGC+TGG + Chr6:56450285-56450304 MsG0680033089.01.T01:CDS 50.0%
GACTTGTGGTTCCTGATGTG+TGG - Chr6:56446972-56446991 None:intergenic 50.0%
GCAGCGTTGTTGCCTTCTAA+TGG - Chr6:56446793-56446812 None:intergenic 50.0%
GCATCTTGTGGGTCGGATTA+AGG + Chr6:56450515-56450534 MsG0680033089.01.T01:CDS 50.0%
GCTCAACATTCCACTCGGTA+CGG + Chr6:56446831-56446850 MsG0680033089.01.T01:CDS 50.0%
GCTTTGTGGGAACCATCTTC+TGG - Chr6:56450285-56450304 None:intergenic 50.0%
GGAAGCTTATGCTATGACCG+AGG + Chr6:56450230-56450249 MsG0680033089.01.T01:CDS 50.0%
GGACTTGGGACAAAGTTGCA+TGG - Chr6:56454532-56454551 None:intergenic 50.0%
GGAGATGAGATGATTGGCAG+CGG - Chr6:56446116-56446135 None:intergenic 50.0%
GGATGAATCGGGTCGGATTA+TGG + Chr6:56450347-56450366 MsG0680033089.01.T01:CDS 50.0%
GGATTGGAGTAATCCGGTGA+GGG - Chr6:56446005-56446024 None:intergenic 50.0%
GGCTGTCTTGGGCAAAGAAT+CGG - Chr6:56455932-56455951 None:intergenic 50.0%
GGTCGGATTTAAACGGGTGA+CGG + Chr6:56452440-56452459 MsG0680033089.01.T01:intron 50.0%
GTCGGATTTAAACGGGTGAC+GGG + Chr6:56452441-56452460 MsG0680033089.01.T01:intron 50.0%
TAATCCGGTGAGGGTAGTTG+CGG - Chr6:56445996-56446015 None:intergenic 50.0%
TCCAGCGGAGATGAGATGAT+TGG - Chr6:56446122-56446141 None:intergenic 50.0%
TCGTAGCTGTAGTGCTTCGT+TGG + Chr6:56447320-56447339 MsG0680033089.01.T01:CDS 50.0%
TCTTGGGGTCTGTTTGGATG+TGG - Chr6:56448876-56448895 None:intergenic 50.0%
TGAAGTGGATGCTGTCCTTC+TGG + Chr6:56451491-56451510 MsG0680033089.01.T01:CDS 50.0%
TGAATCGGGTCGGATTATGG+AGG + Chr6:56450350-56450369 MsG0680033089.01.T01:CDS 50.0%
TGAGATGATTGGCAGCGGAT+TGG - Chr6:56446111-56446130 None:intergenic 50.0%
TGCTGTTCGGGTAATCAGGT+CGG + Chr6:56452423-56452442 MsG0680033089.01.T01:intron 50.0%
TGGCTCCGGTTATTCTAGGT+TGG + Chr6:56447340-56447359 MsG0680033089.01.T01:intron 50.0%
TGGGAACCATCTTCTGGCAA+AGG - Chr6:56450279-56450298 None:intergenic 50.0%
TTGAAGGAAACCGTACCGAG+TGG - Chr6:56446844-56446863 None:intergenic 50.0%
TTTGAACCTCAGGCCTTACG+AGG - Chr6:56446519-56446538 None:intergenic 50.0%
! AACCGGAGTTTCGGGTAAAC+CGG - Chr6:56447297-56447316 None:intergenic 50.0%
! AACCGGTTTACCCGAAACTC+CGG + Chr6:56447292-56447311 MsG0680033089.01.T01:CDS 50.0%
! AGTTTCGGGTAAACCGGTTC+AGG - Chr6:56447291-56447310 None:intergenic 50.0%
! CGATTGCTGTTCGGGTAATC+AGG + Chr6:56452419-56452438 MsG0680033089.01.T01:intron 50.0%
! GTAGCTCAGGCAGTTGCTTT+CGG + Chr6:56451525-56451544 MsG0680033089.01.T01:CDS 50.0%
! GTTTCGGGTAAACCGGTTCA+GGG - Chr6:56447290-56447309 None:intergenic 50.0%
! TATGAAAGTGTGGTCGGGCT+CGG + Chr6:56452472-56452491 MsG0680033089.01.T01:intron 50.0%
! TGAAACCGAGTTCGCTGACT+CGG - Chr6:56446911-56446930 None:intergenic 50.0%
! TGAGAACCTCGATGGTGTTG+GGG - Chr6:56446177-56446196 None:intergenic 50.0%
!! AGAAAAAGTGCCACGTCGGA+TGG - Chr6:56446949-56446968 None:intergenic 50.0%
!! AGCGACGGATTGGAGTAATC+CGG - Chr6:56446011-56446030 None:intergenic 50.0%
!! GGAGGGGAATTTTTCAGCGA+CGG - Chr6:56446026-56446045 None:intergenic 50.0%
!! GGTTTATCGGCTCAGTGAGT+TGG + Chr6:56447053-56447072 MsG0680033089.01.T01:CDS 50.0%
!! GTGGAGAAAAAGTGCCACGT+CGG - Chr6:56446953-56446972 None:intergenic 50.0%
!! TCGTTGGCTCCGGTTATTCT+AGG + Chr6:56447336-56447355 MsG0680033089.01.T01:CDS 50.0%
!!! CGGTTTTGACGGGTTTCAGT+CGG - Chr6:56452401-56452420 None:intergenic 50.0%
!!! GGTTTTGACGGGTTTCAGTC+GGG - Chr6:56452400-56452419 None:intergenic 50.0%
AACCACAAGTCGGCCTAAGG+GGG + Chr6:56446981-56447000 MsG0680033089.01.T01:CDS 55.0%
AGGAACCACAAGTCGGCCTA+AGG + Chr6:56446978-56446997 MsG0680033089.01.T01:CDS 55.0%
AGTAGCAGCTAGCCATGAGG+AGG - Chr6:56449481-56449500 None:intergenic 55.0%
ATTACATTCTCGGTCGGGCC+TGG - Chr6:56452712-56452731 None:intergenic 55.0%
CCAAACCGAGTCAGCGAACT+CGG + Chr6:56446903-56446922 MsG0680033089.01.T01:CDS 55.0%
CTACGTCTGGATGTGCCAGA+AGG - Chr6:56451509-56451528 None:intergenic 55.0%
GAAACCGCAACTACCCTCAC+CGG + Chr6:56445989-56446008 MsG0680033089.01.T01:CDS 55.0%
GAACCACAAGTCGGCCTAAG+GGG + Chr6:56446980-56446999 MsG0680033089.01.T01:CDS 55.0%
GCCAATCATCTCATCTCCGC+TGG + Chr6:56446118-56446137 MsG0680033089.01.T01:CDS 55.0%
GCTGGGTTGCTGAGTTCACT+CGG + Chr6:56447123-56447142 MsG0680033089.01.T01:CDS 55.0%
GGAACCACAAGTCGGCCTAA+GGG + Chr6:56446979-56446998 MsG0680033089.01.T01:CDS 55.0%
GTCGAACCCGTTGTCTCAGA+CGG + Chr6:56453533-56453552 MsG0680033089.01.T01:intron 55.0%
GTGAGAGCGACGACATCGTT+GGG - Chr6:56446151-56446170 None:intergenic 55.0%
GTTACCACAACCCTCGCTAG+TGG + Chr6:56449503-56449522 MsG0680033089.01.T01:intron 55.0%
TAATGCCACGTGGTACACGG+CGG + Chr6:56447221-56447240 MsG0680033089.01.T01:CDS 55.0%
TCTTTGCCCAAGACAGCCAC+TGG + Chr6:56455934-56455953 MsG0680033089.01.T01:CDS 55.0%
TGATCCACTAGCGAGGGTTG+TGG - Chr6:56449510-56449529 None:intergenic 55.0%
TGGTTCCCACAAAGCTGGGT+CGG + Chr6:56450290-56450309 MsG0680033089.01.T01:CDS 55.0%
TTGTCTCAGACGGTCCGGAA+TGG + Chr6:56453543-56453562 MsG0680033089.01.T01:intron 55.0%
! AACCTCGATGGTGTTGGGGA+AGG - Chr6:56446173-56446192 None:intergenic 55.0%
! ACAACGGGTTCGACGGATGA+CGG - Chr6:56453527-56453546 None:intergenic 55.0%
! CGGATTGGAGTAATCCGGTG+AGG - Chr6:56446006-56446025 None:intergenic 55.0%
! GAATTTTCCGGCGACGGAGA+TGG - Chr6:56446056-56446075 None:intergenic 55.0%
! GAGGTCGAATTTTCCGGCGA+CGG - Chr6:56446062-56446081 None:intergenic 55.0%
! GTCTGAGACAACGGGTTCGA+CGG - Chr6:56453534-56453553 None:intergenic 55.0%
! TTCCGGACCGTCTGAGACAA+CGG - Chr6:56453543-56453562 None:intergenic 55.0%
!! AGCATTTGGGGCACCCGTTT+TGG + Chr6:56450209-56450228 MsG0680033089.01.T01:CDS 55.0%
!! CGAGTTCGCTGACTCGGTTT+GGG - Chr6:56446905-56446924 None:intergenic 55.0%
!! CTGTAGTGCTTCGTTGGCTC+CGG + Chr6:56447326-56447345 MsG0680033089.01.T01:CDS 55.0%
!! TGCGTTTAATGGTGCTGCCG+TGG - Chr6:56446707-56446726 None:intergenic 55.0%
!! TTAATGGTGCTGCCGTGGCT+CGG - Chr6:56446702-56446721 None:intergenic 55.0%
!! TTGCTGAGTTCACTCGGTGC+CGG + Chr6:56447129-56447148 MsG0680033089.01.T01:CDS 55.0%
ACCCGTTGTCTCAGACGGTC+CGG + Chr6:56453538-56453557 MsG0680033089.01.T01:intron 60.0%
ACGGGTTTCAGTCGGGTCAC+GGG - Chr6:56452393-56452412 None:intergenic 60.0%
CACCTTCCCCAACACCATCG+AGG + Chr6:56446168-56446187 MsG0680033089.01.T01:CDS 60.0%
CATGGAGGTGGGAATGGGTG+AGG - Chr6:56446081-56446100 None:intergenic 60.0%
CCCACAAAGCTGGGTCGGTT+GGG + Chr6:56450295-56450314 MsG0680033089.01.T01:CDS 60.0%
CGTGATTCGAGTCCGAGCCA+CGG + Chr6:56446687-56446706 MsG0680033089.01.T01:CDS 60.0%
CTCGGACTCGAATCACGGCA+AGG - Chr6:56446684-56446703 None:intergenic 60.0%
GCAACTGCCTGAGCTACGTC+TGG - Chr6:56451522-56451541 None:intergenic 60.0%
GGAGGCTGATGTTAACGGCG+AGG + Chr6:56450368-56450387 MsG0680033089.01.T01:CDS 60.0%
GGCACATCCAGACGTAGCTC+AGG + Chr6:56451512-56451531 MsG0680033089.01.T01:CDS 60.0%
GGGTCGGTTGGGAAACCTGT+GGG + Chr6:56450306-56450325 MsG0680033089.01.T01:CDS 60.0%
GGTGAGAGCGACGACATCGT+TGG - Chr6:56446152-56446171 None:intergenic 60.0%
TCCCAACCGACCCAGCTTTG+TGG - Chr6:56450299-56450318 None:intergenic 60.0%
TCCCACAAAGCTGGGTCGGT+TGG + Chr6:56450294-56450313 MsG0680033089.01.T01:CDS 60.0%
TCGATAGGCACGCCTCCTCA+TGG + Chr6:56449466-56449485 MsG0680033089.01.T01:intron 60.0%
TGACTCAGTGGGACCCCCTT+AGG - Chr6:56446997-56447016 None:intergenic 60.0%
TGGGTCGGTTGGGAAACCTG+TGG + Chr6:56450305-56450324 MsG0680033089.01.T01:CDS 60.0%
TGTCGTCCTCGTAAGGCCTG+AGG + Chr6:56446510-56446529 MsG0680033089.01.T01:intron 60.0%
! CAACGGGTTCGACGGATGAC+GGG - Chr6:56453526-56453545 None:intergenic 60.0%
! CCCAACCGACCCAGCTTTGT+GGG - Chr6:56450298-56450317 None:intergenic 60.0%
! CGTGGCTCGGACTCGAATCA+CGG - Chr6:56446689-56446708 None:intergenic 60.0%
! GACGGGTTTCAGTCGGGTCA+CGG - Chr6:56452394-56452413 None:intergenic 60.0%
! TCCGGACCGTCTGAGACAAC+GGG - Chr6:56453542-56453561 None:intergenic 60.0%
!! AACTAGGGCTGAGCATCGGC+CGG - Chr6:56453632-56453651 None:intergenic 60.0%
!! CCGAGTTCGCTGACTCGGTT+TGG - Chr6:56446906-56446925 None:intergenic 60.0%
!!! CGGCGGAGTAGTGGGTTTTG+CGG - Chr6:56453501-56453520 None:intergenic 60.0%
!!! GGAGTAGTGGGTTTTGCGGG+TGG - Chr6:56453497-56453516 None:intergenic 60.0%
!!! GGCGGAGTAGTGGGTTTTGC+GGG - Chr6:56453500-56453519 None:intergenic 60.0%
ACGGAGATGGCACGACGGGA+GGG - Chr6:56446043-56446062 None:intergenic 65.0%
AGGAACCGCCGTGTACCACG+TGG - Chr6:56447229-56447248 None:intergenic 65.0%
!! ACTAGGGCTGAGCATCGGCC+GGG - Chr6:56453631-56453650 None:intergenic 65.0%
!! CTGAGTTCACTCGGTGCCGG+AGG + Chr6:56447132-56447151 MsG0680033089.01.T01:CDS 65.0%
!! GACCCCCTTAGGCCGACTTG+TGG - Chr6:56446986-56447005 None:intergenic 65.0%
!! GGTTCGACGGATGACGGGCA+CGG - Chr6:56453521-56453540 None:intergenic 65.0%
!! TTCACTCGGTGCCGGAGGTG+CGG + Chr6:56447137-56447156 MsG0680033089.01.T01:CDS 65.0%
CGGAGATGGCACGACGGGAG+GGG - Chr6:56446042-56446061 None:intergenic 70.0%
CGGCGACGGAGATGGCACGA+CGG - Chr6:56446048-56446067 None:intergenic 70.0%
CGTCGTGCCATCTCCGTCGC+CGG + Chr6:56446046-56446065 MsG0680033089.01.T01:CDS 70.0%
GACGGAGATGGCACGACGGG+AGG - Chr6:56446044-56446063 None:intergenic 70.0%
GACGGGCACGGCGGAGTAGT+GGG - Chr6:56453509-56453528 None:intergenic 70.0%
GCAGAGAATCTCCCCGCCGC+CGG - Chr6:56447171-56447190 None:intergenic 70.0%
GGCCCGAAACCGACCGTACC+CGG + Chr6:56453610-56453629 MsG0680033089.01.T01:intron 70.0%
GGCGACGGAGATGGCACGAC+GGG - Chr6:56446047-56446066 None:intergenic 70.0%
! CGGCCGGGTACGGTCGGTTT+CGG - Chr6:56453616-56453635 None:intergenic 70.0%
! GGCCGGGTACGGTCGGTTTC+GGG - Chr6:56453615-56453634 None:intergenic 70.0%
! TGACGGGCACGGCGGAGTAG+TGG - Chr6:56453510-56453529 None:intergenic 70.0%
!! GAGCATCGGCCGGGTACGGT+CGG - Chr6:56453622-56453641 None:intergenic 70.0%
!! GGCTGAGCATCGGCCGGGTA+CGG - Chr6:56453626-56453645 None:intergenic 70.0%
!! TCGACGGATGACGGGCACGG+CGG - Chr6:56453518-56453537 None:intergenic 70.0%
AGGTGCGGTGGCGTTGCCGG+CGG + Chr6:56447152-56447171 MsG0680033089.01.T01:CDS 75.0%
CGGCAACGCCACCGCACCTC+CGG - Chr6:56447151-56447170 None:intergenic 75.0%
! CGGAGGTGCGGTGGCGTTGC+CGG + Chr6:56447149-56447168 MsG0680033089.01.T01:CDS 75.0%
!! ACTCGGTGCCGGAGGTGCGG+TGG + Chr6:56447140-56447159 MsG0680033089.01.T01:CDS 75.0%
! TGCGGTGGCGTTGCCGGCGG+CGG + Chr6:56447155-56447174 MsG0680033089.01.T01:CDS 80.0%
! CGGTGGCGTTGCCGGCGGCG+GGG + Chr6:56447157-56447176 MsG0680033089.01.T01:CDS 85.0%
! GCGGTGGCGTTGCCGGCGGC+GGG + Chr6:56447156-56447175 MsG0680033089.01.T01:CDS 85.0%
Chromosome Type Strat End Strand Name
Chr6 gene 56445903 56456204 56445903 ID=MsG0680033089.01;Name=MsG0680033089.01
Chr6 mRNA 56445903 56456204 56445903 ID=MsG0680033089.01.T01;Parent=MsG0680033089.01;Name=MsG0680033089.01.T01;_AED=0.41;_eAED=0.41;_QI=83|1|1|1|1|1|5|192|517
Chr6 exon 56445903 56446189 56445903 ID=MsG0680033089.01.T01:exon:5070;Parent=MsG0680033089.01.T01
Chr6 exon 56446667 56447357 56446667 ID=MsG0680033089.01.T01:exon:5071;Parent=MsG0680033089.01.T01
Chr6 exon 56450196 56450555 56450196 ID=MsG0680033089.01.T01:exon:5072;Parent=MsG0680033089.01.T01
Chr6 exon 56451472 56451575 56451472 ID=MsG0680033089.01.T01:exon:5073;Parent=MsG0680033089.01.T01
Chr6 exon 56455818 56456204 56455818 ID=MsG0680033089.01.T01:exon:5074;Parent=MsG0680033089.01.T01
Chr6 five_prime_UTR 56445903 56445985 56445903 ID=MsG0680033089.01.T01:five_prime_utr;Parent=MsG0680033089.01.T01
Chr6 CDS 56445986 56446189 56445986 ID=MsG0680033089.01.T01:cds;Parent=MsG0680033089.01.T01
Chr6 CDS 56446667 56447357 56446667 ID=MsG0680033089.01.T01:cds;Parent=MsG0680033089.01.T01
Chr6 CDS 56450196 56450555 56450196 ID=MsG0680033089.01.T01:cds;Parent=MsG0680033089.01.T01
Chr6 CDS 56451472 56451575 56451472 ID=MsG0680033089.01.T01:cds;Parent=MsG0680033089.01.T01
Chr6 CDS 56455818 56456012 56455818 ID=MsG0680033089.01.T01:cds;Parent=MsG0680033089.01.T01
Chr6 three_prime_UTR 56456013 56456204 56456013 ID=MsG0680033089.01.T01:three_prime_utr;Parent=MsG0680033089.01.T01
Gene Sequence

>MsG0680033089.01.T01

ATGGAAACCGCAACTACCCTCACCGGATTACTCCAATCCGTCGCTGAAAAATTCCCCTCCCGTCGTGCCATCTCCGTCGCCGGAAAATTCGACCTCACCCATTCCCACCTCCATGAATTAGTCCAATCCGCTGCCAATCATCTCATCTCCGCTGGAATCAAACCCAACGATGTCGTCGCTCTCACCTTCCCCAACACCATCGAGTATGTTATCATGTTCCTTGCCGTGATTCGAGTCCGAGCCACGGCAGCACCATTAAACGCAGCATACACATCAGAAGAATTCGAGTTTTATCTCTCCGACTCAGAATCAAAGCTTCTCTTAACACCATTAGAAGGCAACAACGCTGCTCAAACCGCAGCTTCAAAGCTCAACATTCCACTCGGTACGGTTTCCTTCAATAAAACCGAAGAAGAAACAAAAATTTCAATCTCGCTGACCCAAACCGAGTCAGCGAACTCGGTTTCAGAACTCATTAACGAACCATCCGACGTGGCACTTTTTCTCCACACATCAGGAACCACAAGTCGGCCTAAGGGGGTCCCACTGAGTCAGCACAATTTGGTTTCATCGGTTCGAAACATTGAATCGGTTTATCGGCTCAGTGAGTTGGATTCGACTGTGATTGTTCTTCCTCTTTTTCATGTTCATGGGTTGATTGCTGGGTTGCTGAGTTCACTCGGTGCCGGAGGTGCGGTGGCGTTGCCGGCGGCGGGGAGATTCTCTGCATCAACGTTTTGGAAGGATATGATTCAATATAATGCCACGTGGTACACGGCGGTTCCTACCATACACCAGATTATATTGGACCGTCATCAAAGTAACCCTGAACCGGTTTACCCGAAACTCCGGTTTATTCGTAGCTGTAGTGCTTCGTTGGCTCCGGTTATTCTAGATCGTTTGGAGGAAGCATTTGGGGCACCCGTTTTGGAAGCTTATGCTATGACCGAGGCTACTCATTTGATGTGTTCAAATCCTTTGCCAGAAGATGGTTCCCACAAAGCTGGGTCGGTTGGGAAACCTGTGGGTCAAGAAATGGCTATTTTGGATGAATCGGGTCGGATTATGGAGGCTGATGTTAACGGCGAGGTTTGTATTAAGGGACAAAATGTTACAAAAGGCTATAAGAACAATGAAGAAGCTAATAAGTCAGCATTTTTGTTTGGTTGGTTTCATACTGGTGATATTGGTTACTTTGATTCTGATGGGTATTTGCATCTTGTGGGTCGGATTAAGGAGCTCATCAATAGAGGAGGAGAGAAAATATCACCAATTGAAGTGGATGCTGTCCTTCTGGCACATCCAGACGTAGCTCAGGCAGTTGCTTTCGGAGTGCCAGATCAGAAATACGGTGAAGAGATTCATTGTGCAATCATTCCAAGAGAAGGATCAAATATTGATGCTGAAGAGGTGCTAAAATATTGCAAGAAGAATCTCACATCTTTTAAAGTTCCCAAAAAGGTTTCATTACCGATTCTTTGCCCAAGACAGCCACTGGCAAGATTTTACGTCGTCTTGTGGCAGAACACTTTGTCTCTCAAGCTTGAGTCATGA
Protein sequence

>MsG0680033089.01.T01

METATTLTGLLQSVAEKFPSRRAISVAGKFDLTHSHLHELVQSAANHLISAGIKPNDVVALTFPNTIEYVIMFLAVIRVRATAAPLNAAYTSEEFEFYLSDSESKLLLTPLEGNNAAQTAASKLNIPLGTVSFNKTEEETKISISLTQTESANSVSELINEPSDVALFLHTSGTTSRPKGVPLSQHNLVSSVRNIESVYRLSELDSTVIVLPLFHVHGLIAGLLSSLGAGGAVALPAAGRFSASTFWKDMIQYNATWYTAVPTIHQIILDRHQSNPEPVYPKLRFIRSCSASLAPVILDRLEEAFGAPVLEAYAMTEATHLMCSNPLPEDGSHKAGSVGKPVGQEMAILDESGRIMEADVNGEVCIKGQNVTKGYKNNEEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLAHPDVAQAVAFGVPDQKYGEEIHCAIIPREGSNIDAEEVLKYCKKNLTSFKVPKKVSLPILCPRQPLARFYVVLWQNTLSLKLES*