AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680033146.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680033146.01.T01 MTR_3g035130 96.893 515 16 0 1 515 1 515 0.0 1025
MsG0680033146.01.T01 MTR_3g035130 96.476 454 16 0 1 454 1 454 0.0 899
MsG0680033146.01.T01 MTR_4g057730 32.649 487 306 12 32 505 55 532 2.66e-59 205
MsG0680033146.01.T01 MTR_2g095510 31.365 491 304 12 32 505 55 529 7.03e-59 204
MsG0680033146.01.T01 MTR_1569s0010 29.644 533 330 11 10 505 1 525 1.11e-56 197
MsG0680033146.01.T01 MTR_5g027480 31.211 487 313 11 32 505 68 545 1.52e-55 195
MsG0680033146.01.T01 MTR_4g011790 29.848 526 318 17 25 507 78 595 2.08e-55 196
MsG0680033146.01.T01 MTR_3g460770 27.745 501 328 12 32 514 56 540 4.82e-55 194
MsG0680033146.01.T01 MTR_4g011790 29.787 517 316 16 25 502 78 586 9.01e-55 194
MsG0680033146.01.T01 MTR_4g128337 31.006 487 316 11 32 505 59 538 1.11e-53 190
MsG0680033146.01.T01 MTR_2g105570 29.132 484 315 13 42 505 64 539 1.46e-53 190
MsG0680033146.01.T01 MTR_5g007640 29.981 517 314 17 17 505 81 577 3.20e-53 189
MsG0680033146.01.T01 MTR_4g011790 29.346 535 318 18 25 507 78 604 7.49e-53 189
MsG0680033146.01.T01 MTR_4g013210 32.199 382 222 12 164 514 70 445 2.37e-51 181
MsG0680033146.01.T01 MTR_4g077900 30.785 484 295 14 45 505 2 468 2.15e-50 179
MsG0680033146.01.T01 MTR_1g026310 28.310 491 327 12 32 505 68 550 1.93e-49 179
MsG0680033146.01.T01 MTR_4g005750 31.237 493 305 17 33 505 54 532 2.44e-49 178
MsG0680033146.01.T01 MTR_1g063110 30.408 490 318 12 32 505 56 538 5.29e-49 177
MsG0680033146.01.T01 MTR_5g027500 29.091 495 317 12 36 505 73 558 9.67e-49 177
MsG0680033146.01.T01 MTR_8g039720 29.400 500 312 16 32 505 65 549 1.37e-47 174
MsG0680033146.01.T01 MTR_1g063120 29.615 493 329 12 28 505 53 542 6.07e-47 172
MsG0680033146.01.T01 MTR_4g013210 28.247 485 297 15 42 484 92 567 3.00e-46 170
MsG0680033146.01.T01 MTR_3g088870 26.721 494 336 13 24 505 69 548 5.22e-46 169
MsG0680033146.01.T01 MTR_4g057730 32.388 423 264 12 32 441 55 468 1.57e-45 166
MsG0680033146.01.T01 MTR_3g064420 28.597 549 342 14 5 512 15 554 5.21e-44 164
MsG0680033146.01.T01 MTR_8g074040 27.290 524 342 14 15 509 65 578 7.30e-44 164
MsG0680033146.01.T01 MTR_0803s0020 26.096 502 325 14 25 501 254 734 1.55e-43 166
MsG0680033146.01.T01 MTR_3g088880 27.957 465 295 15 58 505 105 546 1.53e-42 159
MsG0680033146.01.T01 MTR_1g073180 26.240 484 327 12 32 505 61 524 3.04e-42 158
MsG0680033146.01.T01 MTR_5g008800 28.625 531 325 20 18 509 19 534 7.04e-42 157
MsG0680033146.01.T01 MTR_5g008820 28.376 511 323 19 26 507 34 530 6.78e-41 155
MsG0680033146.01.T01 MTR_4g013210 25.878 541 323 17 10 514 58 556 1.66e-40 154
MsG0680033146.01.T01 MTR_8g074040 29.494 356 226 10 170 509 114 460 8.32e-40 150
MsG0680033146.01.T01 MTR_2g095510 31.373 408 247 12 32 422 55 446 2.75e-39 149
MsG0680033146.01.T01 MTR_4g057730 32.178 404 252 12 32 422 55 449 3.36e-39 148
MsG0680033146.01.T01 MTR_5g076240 27.789 511 328 14 32 509 40 542 7.38e-39 149
MsG0680033146.01.T01 MTR_2g030240 27.190 548 351 15 10 514 4 546 7.57e-39 149
MsG0680033146.01.T01 MTR_4g013210 29.650 371 205 11 164 514 70 404 2.52e-38 145
MsG0680033146.01.T01 MTR_1g090737 28.834 489 318 15 32 505 83 556 4.40e-38 147
MsG0680033146.01.T01 MTR_8g074120 26.653 484 308 12 59 509 20 489 1.03e-36 142
MsG0680033146.01.T01 MTR_5g076220 27.853 517 319 16 32 506 40 544 5.05e-35 138
MsG0680033146.01.T01 MTR_4g121600 23.801 542 368 15 3 507 18 551 2.39e-34 136
MsG0680033146.01.T01 MTR_1g073180 25.108 462 316 12 32 483 83 524 2.95e-34 135
MsG0680033146.01.T01 MTR_2g044180 28.177 362 225 12 170 507 110 460 5.91e-34 134
MsG0680033146.01.T01 MTR_2g044180 28.177 362 225 12 170 507 201 551 1.32e-33 134
MsG0680033146.01.T01 MTR_7g084850 25.524 525 331 16 32 507 203 716 5.97e-32 130
MsG0680033146.01.T01 MTR_2g030240 29.275 386 236 11 162 514 71 452 2.17e-31 126
MsG0680033146.01.T01 MTR_5g076200 26.070 514 330 16 32 507 40 541 4.87e-29 121
MsG0680033146.01.T01 MTR_1054s0020 24.758 517 343 15 6 502 269 759 7.11e-28 118
MsG0680033146.01.T01 MTR_0161s0050 28.841 371 216 14 170 509 196 549 9.86e-28 117
MsG0680033146.01.T01 MTR_4g013210 27.473 364 225 12 42 375 92 446 4.12e-26 111
MsG0680033146.01.T01 MTR_5g023730 24.399 541 353 18 10 513 21 542 8.09e-25 108
MsG0680033146.01.T01 MTR_4g013210 25.336 446 271 15 10 432 58 464 1.20e-24 107
MsG0680033146.01.T01 MTR_1g104810 25.904 332 191 10 161 444 189 513 6.98e-22 99.8
MsG0680033146.01.T01 MTR_1g104810 25.904 332 191 10 161 444 256 580 8.77e-22 99.8
MsG0680033146.01.T01 MTR_1g034360 21.818 495 297 16 25 444 71 550 5.13e-20 94.0
MsG0680033146.01.T01 MTR_4g068670 21.976 496 302 16 21 444 66 548 5.74e-20 94.0
MsG0680033146.01.T01 MTR_5g009350 23.868 486 293 15 28 444 74 551 1.04e-19 93.2
MsG0680033146.01.T01 MTR_5g009350 23.868 486 293 15 28 444 74 551 1.13e-19 92.8
MsG0680033146.01.T01 MTR_5g009350 24.289 457 270 14 28 416 74 522 1.61e-19 92.4
MsG0680033146.01.T01 MTR_5g009350 24.289 457 270 14 28 416 74 522 1.80e-19 92.0
MsG0680033146.01.T01 MTR_3g087980 24.380 484 280 15 32 437 106 581 6.32e-18 87.4
MsG0680033146.01.T01 MTR_8g099420 22.653 490 288 17 6 416 46 523 9.54e-18 87.0
MsG0680033146.01.T01 MTR_1g030290 25.203 369 194 13 153 450 239 596 3.21e-17 85.5
MsG0680033146.01.T01 MTR_5g009360 23.045 486 297 15 28 444 74 551 4.15e-17 85.1
MsG0680033146.01.T01 MTR_5g009360 24.934 381 211 13 131 444 53 425 6.17e-16 80.9
MsG0680033146.01.T01 MTR_7g109830 22.180 523 309 17 5 444 42 549 2.12e-15 79.7
MsG0680033146.01.T01 MTR_3g084450 22.083 557 304 23 32 477 107 644 2.41e-15 79.3
MsG0680033146.01.T01 MTR_3g082660 24.109 477 279 13 33 431 138 609 2.87e-15 79.3
MsG0680033146.01.T01 MTR_1g086600 21.441 555 345 15 5 482 64 604 4.94e-15 78.6
MsG0680033146.01.T01 MTR_4g050430 52.941 68 32 0 1 68 1 68 1.26e-14 68.9
MsG0680033146.01.T01 MTR_3g084450 23.737 396 207 16 164 477 54 436 2.08e-13 72.8
MsG0680033146.01.T01 MTR_2g098490 27.273 330 191 15 160 448 643 964 4.74e-13 72.8
MsG0680033146.01.T01 MTR_1g026430 24.855 346 231 10 15 339 44 381 2.24e-12 69.3
MsG0680033146.01.T01 MTR_1g026470 25.145 346 230 10 15 339 44 381 2.39e-12 69.3
MsG0680033146.01.T01 MTR_4g057755 44.286 70 38 1 373 441 47 116 8.88e-12 62.8
MsG0680033146.01.T01 MTR_3g084470 27.485 171 107 6 295 451 457 624 1.87e-11 67.0
MsG0680033146.01.T01 MTR_8g083170 27.411 197 116 8 295 477 464 647 3.61e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680033146.01.T01 AT3G48990 74.364 511 127 3 6 514 5 513 0.0 761
MsG0680033146.01.T01 AT3G21240 29.659 499 306 15 33 505 65 544 3.54e-55 194
MsG0680033146.01.T01 AT4G05160 28.762 525 351 11 5 514 27 543 5.14e-55 194
MsG0680033146.01.T01 AT1G20510 29.339 484 327 11 31 505 57 534 1.23e-54 192
MsG0680033146.01.T01 AT3G16170 30.353 481 286 14 68 514 142 607 1.80e-54 193
MsG0680033146.01.T01 AT4G19010 29.592 490 323 11 30 505 71 552 1.38e-53 190
MsG0680033146.01.T01 AT1G20480 29.243 489 323 13 32 505 75 555 2.75e-53 189
MsG0680033146.01.T01 AT5G38120 31.423 506 319 17 24 514 57 549 4.37e-52 186
MsG0680033146.01.T01 AT1G51680 30.417 503 302 16 33 505 67 551 1.39e-51 184
MsG0680033146.01.T01 AT1G20500 29.243 489 319 13 32 505 64 540 4.06e-51 183
MsG0680033146.01.T01 AT1G65060 29.592 490 316 14 33 505 77 554 5.81e-51 183
MsG0680033146.01.T01 AT5G63380 29.039 489 316 16 31 505 77 548 4.58e-50 181
MsG0680033146.01.T01 AT3G21230 27.308 509 311 16 32 505 74 558 1.28e-46 171
MsG0680033146.01.T01 AT1G65890 27.562 566 323 18 10 514 19 558 1.37e-46 171
MsG0680033146.01.T01 AT1G66120 27.652 528 341 12 10 504 19 538 2.62e-46 170
MsG0680033146.01.T01 AT1G65880 27.037 540 337 13 10 504 19 546 2.46e-45 168
MsG0680033146.01.T01 AT1G20560 29.533 535 315 19 22 513 32 547 3.41e-44 164
MsG0680033146.01.T01 AT5G38120 30.998 471 297 17 24 479 57 514 1.51e-43 162
MsG0680033146.01.T01 AT1G62940 28.261 506 331 15 25 513 48 538 2.90e-43 161
MsG0680033146.01.T01 AT1G51680 29.436 479 290 16 33 481 67 527 1.33e-42 159
MsG0680033146.01.T01 AT1G20510 29.833 419 279 11 31 440 57 469 4.51e-42 157
MsG0680033146.01.T01 AT1G20560 33.428 353 206 15 170 504 116 457 6.83e-42 156
MsG0680033146.01.T01 AT3G21240 29.466 431 259 15 33 437 65 476 1.02e-41 156
MsG0680033146.01.T01 AT3G21240 29.466 431 259 15 33 437 65 476 1.02e-41 156
MsG0680033146.01.T01 AT1G75960 27.580 533 349 13 6 509 15 539 3.02e-40 153
MsG0680033146.01.T01 AT1G51680 31.034 435 252 16 33 437 67 483 3.72e-40 152
MsG0680033146.01.T01 AT5G38120 32.176 432 265 17 24 440 57 475 8.24e-40 150
MsG0680033146.01.T01 AT5G38120 32.176 432 265 17 24 440 57 475 8.24e-40 150
MsG0680033146.01.T01 AT3G16910 25.599 543 358 15 3 507 20 554 1.03e-39 152
MsG0680033146.01.T01 AT3G21230 26.501 483 296 16 32 479 74 532 7.02e-39 149
MsG0680033146.01.T01 AT1G30520 28.780 549 310 20 24 511 25 553 1.34e-37 145
MsG0680033146.01.T01 AT1G30520 28.780 549 310 20 24 511 25 553 1.34e-37 145
MsG0680033146.01.T01 AT1G65060 29.095 409 261 14 33 424 77 473 6.54e-36 140
MsG0680033146.01.T01 AT1G68270 25.824 546 305 14 10 504 19 515 7.12e-36 140
MsG0680033146.01.T01 AT5G16340 26.792 530 347 15 6 504 15 534 7.23e-36 140
MsG0680033146.01.T01 AT1G20510 29.187 418 274 12 31 432 57 468 7.37e-36 139
MsG0680033146.01.T01 AT5G16370 27.374 537 345 16 6 509 15 539 1.76e-35 139
MsG0680033146.01.T01 AT2G17650 26.224 572 335 15 2 507 43 593 2.21e-35 140
MsG0680033146.01.T01 AT3G21230 26.637 443 268 14 32 440 74 493 2.90e-35 138
MsG0680033146.01.T01 AT1G77240 26.923 546 336 19 6 509 15 539 5.11e-34 135
MsG0680033146.01.T01 AT1G21530 25.543 552 344 15 3 509 12 541 2.05e-33 134
MsG0680033146.01.T01 AT1G21530 25.812 554 342 17 3 509 12 543 4.16e-33 132
MsG0680033146.01.T01 AT5G36880 24.857 523 337 16 32 507 198 711 3.03e-31 128
MsG0680033146.01.T01 AT5G36880 24.857 523 337 16 32 507 148 661 3.64e-31 128
MsG0680033146.01.T01 AT5G36880 24.857 523 337 16 32 507 148 661 3.64e-31 128
MsG0680033146.01.T01 AT5G36880 24.857 523 337 16 32 507 148 661 3.64e-31 128
MsG0680033146.01.T01 AT5G36880 24.857 523 337 16 32 507 148 661 3.64e-31 128
MsG0680033146.01.T01 AT1G21540 26.776 549 344 18 3 509 12 544 4.29e-31 127
MsG0680033146.01.T01 AT1G76290 23.464 537 347 16 10 507 19 530 2.66e-28 119
MsG0680033146.01.T01 AT1G20490 28.684 380 238 14 32 392 64 429 4.36e-26 111
MsG0680033146.01.T01 AT1G20490 28.684 380 238 14 32 392 64 429 4.36e-26 111
MsG0680033146.01.T01 AT5G36880 24.508 457 294 14 32 445 148 596 1.80e-23 104
MsG0680033146.01.T01 AT5G27600 24.353 464 281 14 42 444 129 583 3.08e-23 104
MsG0680033146.01.T01 AT4G11030 24.431 483 278 15 10 415 50 522 1.63e-22 102
MsG0680033146.01.T01 AT4G23850 24.138 493 287 17 1 416 41 523 1.04e-21 99.4
MsG0680033146.01.T01 AT1G30520 26.846 447 264 14 24 427 25 451 1.95e-21 97.8
MsG0680033146.01.T01 AT1G30520 26.846 447 264 14 24 427 25 451 1.95e-21 97.8
MsG0680033146.01.T01 AT2G04350 23.739 476 282 14 33 431 131 602 1.48e-19 92.8
MsG0680033146.01.T01 AT2G04350 23.739 476 282 14 33 431 131 602 1.48e-19 92.8
MsG0680033146.01.T01 AT3G05970 25.602 332 192 10 161 444 259 583 2.79e-19 92.0
MsG0680033146.01.T01 AT3G21230 23.980 392 242 13 32 390 74 442 8.82e-18 86.3
MsG0680033146.01.T01 AT1G64400 22.650 468 282 13 20 416 65 523 9.82e-18 87.0
MsG0680033146.01.T01 AT1G77590 23.800 479 286 14 32 437 107 579 1.52e-16 83.2
MsG0680033146.01.T01 AT1G77590 26.036 338 184 11 163 437 99 433 1.57e-16 82.8
MsG0680033146.01.T01 AT4G14070 25.806 248 146 10 295 511 478 718 4.27e-12 69.3
MsG0680033146.01.T01 AT3G23790 29.825 171 103 6 295 451 462 629 6.57e-12 68.6
MsG0680033146.01.T01 AT5G35930 21.269 536 324 19 26 502 63 559 6.96e-12 68.9
MsG0680033146.01.T01 AT5G35930 21.713 502 298 17 58 502 4 467 8.26e-12 68.6

Find 179 sgRNAs with CRISPR-Local

Find 536 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGAGGTGCGGTGGCGTTGC+CGG 0.202257 6:+58097581 MsG0680033146.01.T01:CDS
GAATCAAGAAATGGCTATTT+TGG 0.205551 6:+58101155 MsG0680033146.01.T01:CDS
TTTAATATTCAATCTCTTCT+TGG 0.207036 6:+58106135 MsG0680033146.01.T01:three_prime_UTR
TAATGGTGAGGTTTGTATTA+AGG 0.224207 6:+58101209 MsG0680033146.01.T01:CDS
CATGTTCATGGGTTGATTGC+TGG 0.234186 6:+58097537 MsG0680033146.01.T01:CDS
TACGAATAAACCGGAGTTTC+GGG 0.234905 6:-58097734 None:intergenic
TGCGGTGGCGTTGCCGGCGG+CGG 0.237024 6:+58097587 MsG0680033146.01.T01:CDS
TCGTTGGCTCCGGTTATTCT+AGG 0.239394 6:+58097768 MsG0680033146.01.T01:CDS
CTTATATATTTGATCAATAA+AGG 0.239730 6:+58105984 MsG0680033146.01.T01:three_prime_UTR
CCCACTGAGTCAGCACAATT+TGG 0.242585 6:+58097437 MsG0680033146.01.T01:CDS
GAATCTTGTGGGTCGGATTA+AGG 0.248701 6:+58101344 MsG0680033146.01.T01:CDS
GATGTGTATGCTGCGTTTAA+TGG 0.271483 6:-58097147 None:intergenic
AGTTTCGGGTAAACCGGTTC+AGG 0.285963 6:-58097720 None:intergenic
AGCATTTGGGGCACCCGTTT+TGG 0.295184 6:+58101038 MsG0680033146.01.T01:CDS
CCGGTTCAGGGTTACTTTGA+TGG 0.302954 6:-58097707 None:intergenic
GGATGAATCGGGTCGCGTTA+TGG 0.309186 6:+58101176 MsG0680033146.01.T01:CDS
CCGAGTTCGCTGACTCGGTT+TGG 0.309477 6:-58097335 None:intergenic
TACCATACACCAGATTATAT+TGG 0.313740 6:+58097680 MsG0680033146.01.T01:CDS
GATCGTTTGGAGGAAGCATT+TGG 0.325350 6:+58101024 MsG0680033146.01.T01:intron
AATGGTGAGGTTTGTATTAA+GGG 0.328460 6:+58101210 MsG0680033146.01.T01:CDS
CTACGAATAAACCGGAGTTT+CGG 0.328986 6:-58097735 None:intergenic
ACAAACATTATAAATATTAC+AGG 0.337341 6:+58096322 None:intergenic
GATTCTCTGCATCCACGTTT+TGG 0.339114 6:+58097613 MsG0680033146.01.T01:CDS
CGGCAACGCCACCGCACCTC+CGG 0.343339 6:-58097580 None:intergenic
CTTAATTATACTATGTTAAG+AGG 0.357304 6:+58106060 MsG0680033146.01.T01:three_prime_UTR
GCTTTGTGGGAACCATCTTC+TGG 0.366997 6:-58101111 None:intergenic
GAAACATTGAATCGGTTTAT+CGG 0.369797 6:+58097472 MsG0680033146.01.T01:CDS
GTAGCTCAGGCAGTTGCTTT+CGG 0.374675 6:+58103094 MsG0680033146.01.T01:CDS
CCCAACCGACCCAGCTTTGT+GGG 0.379424 6:-58101124 None:intergenic
TTATATATTTGATCAATAAA+GGG 0.381993 6:+58105985 MsG0680033146.01.T01:three_prime_UTR
CAGCGGATTGGACTAATTCA+TGG 0.384687 6:-58096530 None:intergenic
ATGTTCATGGGTTGATTGCT+GGG 0.386107 6:+58097538 MsG0680033146.01.T01:CDS
AACCGGAGTTTCGGGTAAAC+CGG 0.388792 6:-58097726 None:intergenic
ATGAGAACCTCGATGGTGTT+GGG 0.390806 6:-58096609 None:intergenic
TCAATGTTTGATCCTTCTCT+TGG 0.391023 6:-58105788 None:intergenic
TTGTTTGGTTGGTTTCATAC+TGG 0.391559 6:+58101288 MsG0680033146.01.T01:CDS
CTTCTCTTAACACCATTAGA+AGG 0.392009 6:+58097210 MsG0680033146.01.T01:CDS
GCGGTGGCGTTGCCGGCGGC+GGG 0.392999 6:+58097588 MsG0680033146.01.T01:CDS
GTTATGGAGGCTGATGTTAA+TGG 0.395020 6:+58101192 MsG0680033146.01.T01:CDS
TGGTTTCATACTGGTGATAT+TGG 0.400021 6:+58101297 MsG0680033146.01.T01:CDS
GTATTTGATACTAGATCGTT+TGG 0.401273 6:+58101011 MsG0680033146.01.T01:intron
AAGGGAGAAAATGTTACAAA+AGG 0.405926 6:+58101228 MsG0680033146.01.T01:CDS
GCAGCGTTGTTGCCTTCTAA+TGG 0.415503 6:-58097222 None:intergenic
AGTCATGAAGTCCCTAGCTT+TGG 0.416144 6:+58105958 MsG0680033146.01.T01:exon
ATCGTTTGGAGGAAGCATTT+GGG 0.416524 6:+58101025 MsG0680033146.01.T01:CDS
ATGGAGATTGGAGATGATTA+AGG 0.417149 6:-58096354 None:intergenic
GTGAGAGCGACGACATCGTT+GGG 0.425982 6:-58096582 None:intergenic
AATCTTGCCAGTGGCTGTCT+TGG 0.427611 6:-58105894 None:intergenic
TTAATGGTGCTGCCGTGGCT+CGG 0.428020 6:-58097131 None:intergenic
ATCTTGCCAGTGGCTGTCTT+GGG 0.436181 6:-58105893 None:intergenic
AAACACCAACCTAGAATAAC+CGG 0.441521 6:-58097777 None:intergenic
ATATATAAGCTTCCAAAGCT+AGG 0.444402 6:-58105970 None:intergenic
CGAGTTCGCTGACTCGGTTT+GGG 0.447576 6:-58097334 None:intergenic
TCTTCACCGTATTTCTGATC+TGG 0.450488 6:-58103121 None:intergenic
CTAATTCATGGAGGTGGGAA+TGG 0.451103 6:-58096518 None:intergenic
GATGGGTATTTGAATCTTGT+GGG 0.451734 6:+58101333 MsG0680033146.01.T01:CDS
TGATGGGTATTTGAATCTTG+TGG 0.454977 6:+58101332 MsG0680033146.01.T01:CDS
CCCACAAAGCTGGGTCGGTT+GGG 0.455784 6:+58101124 MsG0680033146.01.T01:CDS
TCAAATCCTTTGCCAGAAGA+TGG 0.456671 6:+58101099 MsG0680033146.01.T01:CDS
TGAAACCGAGTTCGCTGACT+CGG 0.459037 6:-58097340 None:intergenic
ATAGCATAAGCTTCCAAAAC+GGG 0.459307 6:-58101051 None:intergenic
GGTTTATCGGCTCAGTGAGT+TGG 0.459359 6:+58097485 MsG0680033146.01.T01:CDS
GAAGATGGTTCCCACAAAGC+TGG 0.459406 6:+58101114 MsG0680033146.01.T01:CDS
AAAGGGGTTGGAGGGAAACT+TGG 0.461064 6:+58106002 MsG0680033146.01.T01:three_prime_UTR
CTGTAGTGCTTCGTTGGCTC+CGG 0.462620 6:+58097758 MsG0680033146.01.T01:CDS
AGGACAGCATCCACTTCAAT+TGG 0.464151 6:-58103055 None:intergenic
ATAGCCATTTCTTGATTCAC+AGG 0.469607 6:-58101150 None:intergenic
GATTGGAGATGATTAAGGTC+AGG 0.472724 6:-58096349 None:intergenic
AGGGAGAAAATGTTACAAAA+GGG 0.475519 6:+58101229 MsG0680033146.01.T01:CDS
TAATCCGGTGAGGGTGGTTG+CGG 0.477439 6:-58096427 None:intergenic
GTCCAATATAATCTGGTGTA+TGG 0.477662 6:-58097682 None:intergenic
TAATTCATGGAGGTGGGAAT+GGG 0.478760 6:-58096517 None:intergenic
TGATGAATACGAATGGAGAT+TGG 0.480550 6:-58096366 None:intergenic
ATTGGTTACTTTGATTCTGA+TGG 0.480743 6:+58101315 MsG0680033146.01.T01:CDS
TCCCAACCGACCCAGCTTTG+TGG 0.482067 6:-58101125 None:intergenic
TGAGATGATTGGCAGCGGAT+TGG 0.482369 6:-58096542 None:intergenic
GCCAATCATCTCATCTCCGC+TGG 0.486405 6:+58096552 MsG0680033146.01.T01:CDS
GCAACTGCCTGAGCTACGTC+TGG 0.486875 6:-58103088 None:intergenic
GAAACCTGTGAATCAAGAAA+TGG 0.487535 6:+58101146 MsG0680033146.01.T01:CDS
TCCCACAAAGCTGGGTCGGT+TGG 0.487622 6:+58101123 MsG0680033146.01.T01:CDS
CACTACAGCTACGAATAAAC+CGG 0.490534 6:-58097743 None:intergenic
TTCACTCGGCGCCGGAGGTG+CGG 0.490703 6:+58097569 MsG0680033146.01.T01:CDS
CCAAACCGAGTCAGCGAACT+CGG 0.493888 6:+58097335 MsG0680033146.01.T01:CDS
AGGTGCGGTGGCGTTGCCGG+CGG 0.494600 6:+58097584 MsG0680033146.01.T01:CDS
GGCGACGGAGATGGCACGAC+GGG 0.494759 6:-58096478 None:intergenic
TCAGCACAATTTGGTTTCAT+CGG 0.495409 6:+58097446 MsG0680033146.01.T01:CDS
CGGAGATGGCACGACGGGAG+GGG 0.495576 6:-58096473 None:intergenic
ATCGGTTCGAAACATTGAAT+CGG 0.496518 6:+58097464 MsG0680033146.01.T01:CDS
GAAAATATCACCAATTGAAG+TGG 0.497025 6:+58103045 MsG0680033146.01.T01:CDS
TGATCAATAAAGGGGTTGGA+GGG 0.497705 6:+58105994 MsG0680033146.01.T01:three_prime_UTR
AGGAACCACAAGTCGGCCTA+AGG 0.499184 6:+58097410 MsG0680033146.01.T01:CDS
TGAAGTGGATGCTGTCCTCT+TGG 0.501030 6:+58103060 MsG0680033146.01.T01:CDS
TATTTGATCAATAAAGGGGT+TGG 0.501935 6:+58105990 MsG0680033146.01.T01:three_prime_UTR
GATGGCGGTCCAATATAATC+TGG 0.502465 6:-58097689 None:intergenic
CGTCGTGCCATCTCCGTCGC+CGG 0.504409 6:+58096480 MsG0680033146.01.T01:CDS
ACGGAGATGGCACGACGGGA+GGG 0.506136 6:-58096474 None:intergenic
TCGTAGCTGTAGTGCTTCGT+TGG 0.506151 6:+58097752 MsG0680033146.01.T01:CDS
CCATCAAAGTAACCCTGAAC+CGG 0.507611 6:+58097707 MsG0680033146.01.T01:CDS
AATATAATCTGGTGTATGGT+AGG 0.508133 6:-58097678 None:intergenic
GGCACATCCAGACGTAGCTC+AGG 0.509060 6:+58103081 MsG0680033146.01.T01:CDS
TTGGTTACTTTGATTCTGAT+GGG 0.509552 6:+58101316 MsG0680033146.01.T01:CDS
GCAGAGAATCTCCCCGCCGC+CGG 0.511049 6:-58097600 None:intergenic
ATTGGACTAATTCATGGAGG+TGG 0.511984 6:-58096524 None:intergenic
GACGGAGATGGCACGACGGG+AGG 0.512413 6:-58096475 None:intergenic
TTGATCAATAAAGGGGTTGG+AGG 0.512817 6:+58105993 MsG0680033146.01.T01:three_prime_UTR
TTGGATGAAGAAGATGTTTG+TGG 0.515796 6:-58096389 None:intergenic
ATTAAGGAGCTCATCAATAG+AGG 0.517540 6:+58101360 MsG0680033146.01.T01:CDS
TATGAGAACCTCGATGGTGT+TGG 0.518602 6:-58096610 None:intergenic
GTTTCGGGTAAACCGGTTCA+GGG 0.519234 6:-58097719 None:intergenic
TGGGAACCATCTTCTGGCAA+AGG 0.520309 6:-58101105 None:intergenic
TCCAGCGGAGATGAGATGAT+TGG 0.522291 6:-58096553 None:intergenic
TCTTTGCCCAAGACAGCCAC+TGG 0.523439 6:+58105887 MsG0680033146.01.T01:CDS
TTTGATGATTCTTGTGAAGT+GGG 0.524676 6:+58106088 MsG0680033146.01.T01:three_prime_UTR
AGGGAAACTTGGCATATAAG+AGG 0.529132 6:+58106013 MsG0680033146.01.T01:three_prime_UTR
CATGGAGGTGGGAATGGGTG+AGG 0.533828 6:-58096512 None:intergenic
CTGAGTTCACTCGGCGCCGG+AGG 0.533836 6:+58097564 MsG0680033146.01.T01:CDS
ATTGGAGATGATTAAGGTCA+GGG 0.536195 6:-58096348 None:intergenic
TTGCTGAGTTCACTCGGCGC+CGG 0.540398 6:+58097561 MsG0680033146.01.T01:CDS
GGTATTTGAATCTTGTGGGT+CGG 0.540755 6:+58101337 MsG0680033146.01.T01:CDS
GCTGGGTTGCTGAGTTCACT+CGG 0.540934 6:+58097555 MsG0680033146.01.T01:CDS
AACCGGTTTACCCGAAACTC+CGG 0.542049 6:+58097724 MsG0680033146.01.T01:CDS
TATATAAGCTTCCAAAGCTA+GGG 0.542352 6:-58105969 None:intergenic
GAGAAGCTTTGATTCTGAGT+CGG 0.543617 6:-58097193 None:intergenic
ATATAATGCCACGTGGTACA+CGG 0.547796 6:+58097650 MsG0680033146.01.T01:CDS
ACCAAATTGTGCTGACTCAG+TGG 0.548852 6:-58097438 None:intergenic
GGTGAGAGCGACGACATCGT+TGG 0.552550 6:-58096583 None:intergenic
AGCGACGGATTGGAGTAATC+CGG 0.552594 6:-58096442 None:intergenic
AAGATGGTTCCCACAAAGCT+GGG 0.557458 6:+58101115 MsG0680033146.01.T01:CDS
GGAACCACAAGTCGGCCTAA+GGG 0.558582 6:+58097411 MsG0680033146.01.T01:CDS
CGGTGGCGTTGCCGGCGGCG+GGG 0.560878 6:+58097589 MsG0680033146.01.T01:CDS
CATAGCATAAGCTTCCAAAA+CGG 0.561507 6:-58101052 None:intergenic
ACTCGGCGCCGGAGGTGCGG+TGG 0.565629 6:+58097572 MsG0680033146.01.T01:CDS
GAAACCGCAACCACCCTCAC+CGG 0.565734 6:+58096423 MsG0680033146.01.T01:CDS
GGAGTGCCAGATCAGAAATA+CGG 0.571826 6:+58103115 MsG0680033146.01.T01:CDS
TATATATTTGATCAATAAAG+GGG 0.571982 6:+58105986 MsG0680033146.01.T01:three_prime_UTR
ATCAAACATTGATGCTGAAG+AGG 0.574880 6:+58105799 MsG0680033146.01.T01:CDS
GCTCAACATTCCACTCGGTA+CGG 0.575771 6:+58097263 MsG0680033146.01.T01:CDS
TGCGTTTAATGGTGCTGCCG+TGG 0.577990 6:-58097136 None:intergenic
TTTGATACTAGATCGTTTGG+AGG 0.579262 6:+58101014 MsG0680033146.01.T01:intron
GGAGGCTGATGTTAATGGTG+AGG 0.583933 6:+58101197 MsG0680033146.01.T01:CDS
TGTGCAATCATTCCAAGAGA+AGG 0.588851 6:+58105776 MsG0680033146.01.T01:CDS
TTGGACTAATTCATGGAGGT+GGG 0.589620 6:-58096523 None:intergenic
GAACCACAAGTCGGCCTAAG+GGG 0.590064 6:+58097412 MsG0680033146.01.T01:CDS
GGAAGCTTATGCTATGACTG+AGG 0.590906 6:+58101059 MsG0680033146.01.T01:CDS
GACTTGTGGTTCCTGATGTG+TGG 0.592772 6:-58097401 None:intergenic
TGAGAACCTCGATGGTGTTG+GGG 0.598931 6:-58096608 None:intergenic
TCGTTTGGAGGAAGCATTTG+GGG 0.603871 6:+58101026 MsG0680033146.01.T01:CDS
TGGTTCCCACAAAGCTGGGT+CGG 0.604698 6:+58101119 MsG0680033146.01.T01:CDS
TGAATCGGGTCGCGTTATGG+AGG 0.605504 6:+58101179 MsG0680033146.01.T01:CDS
GGAGATGAGATGATTGGCAG+CGG 0.610520 6:-58096547 None:intergenic
AATCATATCCTTCCAAAACG+TGG 0.615080 6:-58097625 None:intergenic
TTGGAGTAATCCGGTGAGGG+TGG 0.621712 6:-58096433 None:intergenic
CGTGGCTCGGACTCGAATCA+CGG 0.622364 6:-58097118 None:intergenic
CCAAATTGTGCTGACTCAGT+GGG 0.623559 6:-58097437 None:intergenic
AGATCAGAAATACGGTGAAG+AGG 0.624099 6:+58103123 MsG0680033146.01.T01:CDS
AACCTCGATGGTGTTGGGGA+AGG 0.626421 6:-58096604 None:intergenic
GTTCAGGGTTACTTTGATGG+CGG 0.626521 6:-58097704 None:intergenic
CGTGATTCGAGTCCGAGCCA+CGG 0.630675 6:+58097119 MsG0680033146.01.T01:CDS
AATGTTGAGCTTTGAAGCTG+CGG 0.631417 6:-58097250 None:intergenic
TGAGATTATGAGAACCTCGA+TGG 0.631642 6:-58096616 None:intergenic
ATCGTTGGGTTTGATTCCAG+CGG 0.634347 6:-58096568 None:intergenic
CTCGGACTCGAATCACGGCA+AGG 0.637388 6:-58097113 None:intergenic
AACCACAAGTCGGCCTAAGG+GGG 0.637615 6:+58097413 MsG0680033146.01.T01:CDS
TTTGTGGTGATGAATACGAA+TGG 0.641534 6:-58096373 None:intergenic
TTGAAGGAAACCGTACCGAG+TGG 0.648170 6:-58097273 None:intergenic
GGATTGGAGTAATCCGGTGA+GGG 0.649795 6:-58096436 None:intergenic
CGGATTGGAGTAATCCGGTG+AGG 0.664563 6:-58096437 None:intergenic
AAGGAGCTCATCAATAGAGG+AGG 0.664962 6:+58101363 MsG0680033146.01.T01:CDS
TCAAAGCTCAACATTCCACT+CGG 0.680518 6:+58097258 MsG0680033146.01.T01:CDS
CGGCGACGGAGATGGCACGA+CGG 0.685641 6:-58096479 None:intergenic
CACCTTCCCCAACACCATCG+AGG 0.689921 6:+58096602 MsG0680033146.01.T01:CDS
ACACATCAGGAACCACAAGT+CGG 0.690817 6:+58097403 MsG0680033146.01.T01:CDS
ACGACGTAAAATCTTGCCAG+TGG 0.697504 6:-58105903 None:intergenic
CTACGTCTGGATGTGCCAAG+AGG 0.697683 6:-58103075 None:intergenic
CATTAACGAACCATCCGACG+TGG 0.710386 6:+58097368 MsG0680033146.01.T01:CDS
CGGATTGGACTAATTCATGG+AGG 0.726280 6:-58096527 None:intergenic
AGGAACCGCCGTGTACCACG+TGG 0.735418 6:-58097658 None:intergenic
TAATGCCACGTGGTACACGG+CGG 0.739866 6:+58097653 MsG0680033146.01.T01:CDS
TGATTCAATATAATGCCACG+TGG 0.785240 6:+58097643 MsG0680033146.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTAAAAATAATTTGAG+GGG + Chr6:58103839-58103858 MsG0680033146.01.T01:intron 10.0%
!! AATAAAATGAAAAAAAACTA+AGG + Chr6:58103806-58103825 MsG0680033146.01.T01:intron 10.0%
!! ATAAAATGAAAAAAAACTAA+GGG + Chr6:58103807-58103826 MsG0680033146.01.T01:intron 10.0%
!! CATTAAATAATTTATGTATT+TGG + Chr6:58098018-58098037 MsG0680033146.01.T01:intron 10.0%
!! GAAATTTAAAAATAATTTGA+GGG + Chr6:58103838-58103857 MsG0680033146.01.T01:intron 10.0%
!! TATTTGGTATATATTATATT+TGG + Chr6:58105677-58105696 MsG0680033146.01.T01:intron 10.0%
!! TGAAATTTAAAAATAATTTG+AGG + Chr6:58103837-58103856 MsG0680033146.01.T01:intron 10.0%
!! TTATATATTTGATCAATAAA+GGG + Chr6:58105985-58106004 MsG0680033146.01.T01:three_prime_UTR 10.0%
!!! AAAAACTATTGTATTTTTTA+TGG - Chr6:58104015-58104034 None:intergenic 10.0%
!!! TAAGAAATTTTTTACATTTT+AGG - Chr6:58103325-58103344 None:intergenic 10.0%
!!! TATATAGAAATTTTTTTTAG+GGG + Chr6:58098937-58098956 MsG0680033146.01.T01:intron 10.0%
!!! TCTACATTTAATTTATTTTT+GGG + Chr6:58101586-58101605 MsG0680033146.01.T01:intron 10.0%
!!! TCTTTAAAAAAAAAAAAAGT+AGG + Chr6:58101823-58101842 MsG0680033146.01.T01:intron 10.0%
!! AAATTATCCTTATTAACTAT+TGG + Chr6:58099192-58099211 MsG0680033146.01.T01:intron 15.0%
!! AATAGTTAATAAGGATAATT+TGG - Chr6:58099193-58099212 None:intergenic 15.0%
!! AATGAAATGATTTCAAAAAA+TGG + Chr6:58105548-58105567 MsG0680033146.01.T01:intron 15.0%
!! AATGATTAAAAGAAATAGAA+TGG + Chr6:58099159-58099178 MsG0680033146.01.T01:intron 15.0%
!! AATTTGAAGAGATAAAAAAA+AGG + Chr6:58100515-58100534 MsG0680033146.01.T01:intron 15.0%
!! ATAAAAACATGTTAGAAAAA+TGG - Chr6:58103881-58103900 None:intergenic 15.0%
!! CAAAAAATAAAGATATGTTA+TGG + Chr6:58098962-58098981 MsG0680033146.01.T01:intron 15.0%
!! CGAAAAATTTGTATTAAATT+TGG - Chr6:58098719-58098738 None:intergenic 15.0%
!! CTTATATATTTGATCAATAA+AGG + Chr6:58105984-58106003 MsG0680033146.01.T01:three_prime_UTR 15.0%
!! GTTATTATCATTAATAAGTA+TGG - Chr6:58105151-58105170 None:intergenic 15.0%
!! TAAAAACATGTTAGAAAAAT+GGG - Chr6:58103880-58103899 None:intergenic 15.0%
!! TAATAACTTCAAAAACATTT+CGG + Chr6:58105164-58105183 MsG0680033146.01.T01:intron 15.0%
!! TAATACAATTACAGAAAATT+TGG + Chr6:58097020-58097039 MsG0680033146.01.T01:intron 15.0%
!! TACATAAATATTTCCTTTAA+GGG + Chr6:58101950-58101969 MsG0680033146.01.T01:intron 15.0%
!! TATATATTTGATCAATAAAG+GGG + Chr6:58105986-58106005 MsG0680033146.01.T01:three_prime_UTR 15.0%
!! TCTAAAAGTAAATATACAAA+CGG - Chr6:58100720-58100739 None:intergenic 15.0%
!! TGATATGAAAAAGAAAATTA+TGG - Chr6:58100371-58100390 None:intergenic 15.0%
!! TTACATAAATATTTCCTTTA+AGG + Chr6:58101949-58101968 MsG0680033146.01.T01:intron 15.0%
!! TTATATTTAAGAGATTGAAT+TGG - Chr6:58096738-58096757 None:intergenic 15.0%
!!! AAACAAAAAAAACACTTTTT+AGG - Chr6:58100232-58100251 None:intergenic 15.0%
!!! AATAATGATGTTTGATTTTT+AGG + Chr6:58101466-58101485 MsG0680033146.01.T01:intron 15.0%
!!! AATTTTTTATCAGTCTAAAT+TGG + Chr6:58101761-58101780 MsG0680033146.01.T01:intron 15.0%
!!! ATAATTTATGTATTTGGTTT+AGG + Chr6:58098024-58098043 MsG0680033146.01.T01:intron 15.0%
!!! ATAATTTTAACTAATATGCA+AGG + Chr6:58098760-58098779 MsG0680033146.01.T01:intron 15.0%
!!! ATGGTAATAATTTTCTTTTA+TGG - Chr6:58100352-58100371 None:intergenic 15.0%
!!! ATTTAACGTAGTTTTTAAAT+TGG + Chr6:58097901-58097920 MsG0680033146.01.T01:intron 15.0%
!!! ATTTATAAATACTACTTTTC+AGG + Chr6:58105636-58105655 MsG0680033146.01.T01:intron 15.0%
!!! ATTTTATTGACATTCAAAAT+AGG + Chr6:58100876-58100895 MsG0680033146.01.T01:intron 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG + Chr6:58099319-58099338 MsG0680033146.01.T01:intron 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG + Chr6:58100052-58100071 MsG0680033146.01.T01:intron 15.0%
!!! CTCTACATTTAATTTATTTT+TGG + Chr6:58101585-58101604 MsG0680033146.01.T01:intron 15.0%
!!! GTAAATTGTTTCTTATTAAT+AGG - Chr6:58097988-58098007 None:intergenic 15.0%
!!! TACAATAGTTTTTTTTTTTG+AGG + Chr6:58104022-58104041 MsG0680033146.01.T01:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + Chr6:58099216-58099235 MsG0680033146.01.T01:intron 15.0%
!!! TATAGGCTAAAATATATTTT+TGG + Chr6:58103492-58103511 MsG0680033146.01.T01:intron 15.0%
!!! TATCATTACTCTTTTTAAAT+TGG + Chr6:58098590-58098609 MsG0680033146.01.T01:intron 15.0%
!!! TATTTTATAAAAGCAAATGT+TGG - Chr6:58098917-58098936 None:intergenic 15.0%
!!! TGTATCAAAATTAAACTTTT+TGG + Chr6:58105489-58105508 MsG0680033146.01.T01:intron 15.0%
!!! TTAGAGATTTTTTAACAAAA+TGG + Chr6:58104310-58104329 MsG0680033146.01.T01:intron 15.0%
!!! TTTCATTTTAATCTCTTAAA+TGG - Chr6:58103734-58103753 None:intergenic 15.0%
!!! TTTGGTCTTTTAATTTTTAT+CGG + Chr6:58103541-58103560 MsG0680033146.01.T01:intron 15.0%
!! AAAAAAAAATCCCAAACAAA+CGG + Chr6:58104408-58104427 MsG0680033146.01.T01:intron 20.0%
!! AAAAAAACACTAGAAATAGT+AGG - Chr6:58104453-58104472 None:intergenic 20.0%
!! AAAAAGTTTAAGAGAAAGAT+TGG - Chr6:58101649-58101668 None:intergenic 20.0%
!! AAAAGCTAATATGAAACAAA+CGG + Chr6:58104270-58104289 MsG0680033146.01.T01:intron 20.0%
!! AAACTAACCAATAGTTAATA+AGG - Chr6:58099202-58099221 None:intergenic 20.0%
!! AAAGAAAAATTGAGTAAACA+AGG + Chr6:58105523-58105542 MsG0680033146.01.T01:intron 20.0%
!! AAATTAACTAGTTAGAATAG+AGG + Chr6:58096911-58096930 MsG0680033146.01.T01:intron 20.0%
!! AAGAAAAATTGAGTAAACAA+GGG + Chr6:58105524-58105543 MsG0680033146.01.T01:intron 20.0%
!! AATAACTTCAAAAACATTTC+GGG + Chr6:58105165-58105184 MsG0680033146.01.T01:intron 20.0%
!! AATTAACTAGTTAGAATAGA+GGG + Chr6:58096912-58096931 MsG0680033146.01.T01:intron 20.0%
!! ACATTGCAAAAGAATAATTA+AGG - Chr6:58102684-58102703 None:intergenic 20.0%
!! ACGATTATTTATGTAACATA+TGG - Chr6:58101977-58101996 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + Chr6:58099279-58099298 MsG0680033146.01.T01:intron 20.0%
!! CATTGAATACATAATGTATT+TGG + Chr6:58100167-58100186 MsG0680033146.01.T01:intron 20.0%
!! CATTGAATACATAATGTATT+TGG - Chr6:58100186-58100167 None:intergenic 20.0%
!! CTAAAAGTAAATATACAAAC+GGG - Chr6:58100719-58100738 None:intergenic 20.0%
!! CTTAATTATACTATGTTAAG+AGG + Chr6:58106060-58106079 MsG0680033146.01.T01:three_prime_UTR 20.0%
!! GTAGTATTTATAAATATGAC+TGG - Chr6:58105631-58105650 None:intergenic 20.0%
!! TAAATAGTGTCTAACATATT+TGG + Chr6:58103987-58104006 MsG0680033146.01.T01:intron 20.0%
!! TAATATATACCAAATACATC+AGG - Chr6:58105673-58105692 None:intergenic 20.0%
!! TATTTATAAATATGACTGGA+GGG - Chr6:58105627-58105646 None:intergenic 20.0%
!! TCTCTATAGTTTATTAAATG+TGG - Chr6:58100600-58100619 None:intergenic 20.0%
!! TTGATCCTTTAAATAACAAA+TGG - Chr6:58103786-58103805 None:intergenic 20.0%
!! TTGTAGAAAATTTCTAATAG+AGG + Chr6:58102986-58103005 MsG0680033146.01.T01:intron 20.0%
!! TTTAATATTCAATCTCTTCT+TGG + Chr6:58106135-58106154 MsG0680033146.01.T01:three_prime_UTR 20.0%
!! TTTAATGATCAAAAATTCGT+GGG + Chr6:58102179-58102198 MsG0680033146.01.T01:intron 20.0%
!! TTTAATTGTTATGTATTGTC+AGG + Chr6:58105390-58105409 MsG0680033146.01.T01:intron 20.0%
!!! AATATGCTGTCTTTTTTTAA+CGG - Chr6:58102881-58102900 None:intergenic 20.0%
!!! AGATTTAGAAATTGTTGTTT+TGG + Chr6:58099037-58099056 MsG0680033146.01.T01:intron 20.0%
!!! ATAAGCAAAAAAGCATTTTT+AGG + Chr6:58100142-58100161 MsG0680033146.01.T01:intron 20.0%
!!! ATTTGTCTTTTATTCTTCAT+GGG - Chr6:58096768-58096787 None:intergenic 20.0%
!!! CATTTTTCTAGAATAGATTA+TGG + Chr6:58102740-58102759 MsG0680033146.01.T01:intron 20.0%
!!! GTCATTTTTATGTTTTACTT+TGG + Chr6:58103523-58103542 MsG0680033146.01.T01:intron 20.0%
!!! TAATCTATTCTAGAAAAATG+CGG - Chr6:58102740-58102759 None:intergenic 20.0%
!!! TCTAACCATTTGTTATTTAA+AGG + Chr6:58103778-58103797 MsG0680033146.01.T01:intron 20.0%
!!! TGAAATTTTTGTTTCTTCTT+CGG - Chr6:58097304-58097323 None:intergenic 20.0%
!!! TTACTCAATTTTTCTTTTTG+CGG - Chr6:58105520-58105539 None:intergenic 20.0%
!!! TTTAGATTTTGTTACTATGT+TGG + Chr6:58102389-58102408 MsG0680033146.01.T01:intron 20.0%
!!! TTTTGTCTTATCAATTTTTC+AGG + Chr6:58103019-58103038 MsG0680033146.01.T01:intron 20.0%
!!! TTTTTTTTTTTGAGAGAATC+TGG - Chr6:58105063-58105082 None:intergenic 20.0%
! AAAATCAAATGTGAGAAGAA+TGG + Chr6:58100818-58100837 MsG0680033146.01.T01:intron 25.0%
! AAATATACAAACGGGAATAA+GGG - Chr6:58100711-58100730 None:intergenic 25.0%
! AAATTGTTAGAAACAAAGGT+AGG + Chr6:58101792-58101811 MsG0680033146.01.T01:intron 25.0%
! AATTATCTATCTAGTAGTGA+AGG + Chr6:58103442-58103461 MsG0680033146.01.T01:intron 25.0%
! ACACAAAAGTTGTTATCAAA+TGG + Chr6:58100541-58100560 MsG0680033146.01.T01:intron 25.0%
! ACGATAAATCATATATCAAG+TGG - Chr6:58102771-58102790 None:intergenic 25.0%
! AGAACAATTGATTGTTTAGT+TGG - Chr6:58102143-58102162 None:intergenic 25.0%
! ATCGTTATTTATTTCCGTTT+AGG + Chr6:58102786-58102805 MsG0680033146.01.T01:intron 25.0%
! ATTCAAAGAAAAAGAGAGAA+AGG - Chr6:58098318-58098337 None:intergenic 25.0%
! ATTCATTACATGTTTGTCTT+TGG - Chr6:58104983-58105002 None:intergenic 25.0%
! CATTAAATACCTGATGTATT+TGG + Chr6:58105661-58105680 MsG0680033146.01.T01:intron 25.0%
! CTTTGAATGATATACTATAC+TGG + Chr6:58102274-58102293 MsG0680033146.01.T01:intron 25.0%
! CTTTGAATGCTATATTGTAT+TGG + Chr6:58102522-58102541 MsG0680033146.01.T01:intron 25.0%
! CTTTGATGTCTTTCTTATTA+AGG + Chr6:58105216-58105235 MsG0680033146.01.T01:intron 25.0%
! GAATAATAGATTGAAAGTGA+TGG + Chr6:58102057-58102076 MsG0680033146.01.T01:intron 25.0%
! GAGACTTGTCAAAAAAAATT+GGG - Chr6:58103419-58103438 None:intergenic 25.0%
! GTACTAATATCATTACTCAA+GGG + Chr6:58100566-58100585 MsG0680033146.01.T01:intron 25.0%
! GTATTTATAAATATGACTGG+AGG - Chr6:58105628-58105647 None:intergenic 25.0%
! GTTGAATCAAATTTCATGAT+TGG - Chr6:58099399-58099418 None:intergenic 25.0%
! GTTTAATGATCAAAAATTCG+TGG + Chr6:58102178-58102197 MsG0680033146.01.T01:intron 25.0%
! TAAATATACAAACGGGAATA+AGG - Chr6:58100712-58100731 None:intergenic 25.0%
! TACATGGTAAATCCAATAAT+AGG - Chr6:58102318-58102337 None:intergenic 25.0%
! TATGATATGCGTATTATTGT+TGG - Chr6:58096868-58096887 None:intergenic 25.0%
! TCAACAAAGTTGTCATTAAA+TGG + Chr6:58098558-58098577 MsG0680033146.01.T01:intron 25.0%
! TCAACATAACACTTAAACTT+CGG - Chr6:58103357-58103376 None:intergenic 25.0%
! TCACTTAAATGAAACTCTTA+GGG - Chr6:58099454-58099473 None:intergenic 25.0%
! TCATGTAAAGGGAAAATAAT+TGG - Chr6:58099633-58099652 None:intergenic 25.0%
! TCATTGATATTTCCTTGATT+TGG + Chr6:58101535-58101554 MsG0680033146.01.T01:intron 25.0%
! TGAAAATGTCAGAATTCAAT+AGG + Chr6:58096817-58096836 MsG0680033146.01.T01:intron 25.0%
! TGAGACTTGTCAAAAAAAAT+TGG - Chr6:58103420-58103439 None:intergenic 25.0%
! TGTACTAATATCATTACTCA+AGG + Chr6:58100565-58100584 MsG0680033146.01.T01:intron 25.0%
! TTAAAAACTACGTTAAATGC+TGG - Chr6:58097899-58097918 None:intergenic 25.0%
! TTCACTACTAGATAGATAAT+TGG - Chr6:58103443-58103462 None:intergenic 25.0%
! TTTAATCTCTTAAATGGCAA+AGG - Chr6:58103728-58103747 None:intergenic 25.0%
! TTTATGTTGAGTTTATCATG+AGG + Chr6:58098833-58098852 MsG0680033146.01.T01:intron 25.0%
!! ATCAGTAATGAAAACCTTTT+TGG - Chr6:58105867-58105886 None:intergenic 25.0%
!! ATCTCTAAAAATCCATTTGT+AGG - Chr6:58104298-58104317 None:intergenic 25.0%
!! GATTTGTCTTTTATTCTTCA+TGG - Chr6:58096769-58096788 None:intergenic 25.0%
!! GTTTTATGTTTGTAACTGAA+AGG - Chr6:58103609-58103628 None:intergenic 25.0%
!! TCAGTAATGAAAACCTTTTT+GGG - Chr6:58105866-58105885 None:intergenic 25.0%
!! TCTCTAAAAATCCATTTGTA+GGG - Chr6:58104297-58104316 None:intergenic 25.0%
!! TTGTTTCTTATTAATAGGAC+CGG - Chr6:58097983-58098002 None:intergenic 25.0%
!! TTTAGCCTATAAAAAAGTGT+GGG - Chr6:58103483-58103502 None:intergenic 25.0%
!! TTTTAGCCTATAAAAAAGTG+TGG - Chr6:58103484-58103503 None:intergenic 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG - Chr6:58100133-58100152 None:intergenic 25.0%
!!! AAAATTGATAATGTGGGTAT+TGG + Chr6:58099680-58099699 MsG0680033146.01.T01:intron 25.0%
!!! AACCATTTTTTGACAACTTT+TGG + Chr6:58098441-58098460 MsG0680033146.01.T01:intron 25.0%
!!! AACTTTTAAGAAATGCTAAC+CGG - Chr6:58100415-58100434 None:intergenic 25.0%
!!! ATCTTTTAAAGTTCCCAAAA+AGG + Chr6:58105850-58105869 MsG0680033146.01.T01:CDS 25.0%
!!! ATTTTCCCACACTTTTTTAT+AGG + Chr6:58103475-58103494 MsG0680033146.01.T01:intron 25.0%
!!! GATGTTTGATTTTTAGGTTT+GGG + Chr6:58101472-58101491 MsG0680033146.01.T01:intron 25.0%
!!! TCTAGCAAAATTGATAATGT+GGG + Chr6:58099674-58099693 MsG0680033146.01.T01:intron 25.0%
!!! TGATGTTTGATTTTTAGGTT+TGG + Chr6:58101471-58101490 MsG0680033146.01.T01:intron 25.0%
!!! TTCTAGCAAAATTGATAATG+TGG + Chr6:58099673-58099692 MsG0680033146.01.T01:intron 25.0%
!!! TTTATTTTTTTGCATGTGTG+AGG + Chr6:58104667-58104686 MsG0680033146.01.T01:intron 25.0%
!!! TTTCTAGAATAGATTATGGT+TGG + Chr6:58102744-58102763 MsG0680033146.01.T01:intron 25.0%
AAAACAATGGAGAGAGAAAA+AGG - Chr6:58098513-58098532 None:intergenic 30.0%
AAATTGTAAACCCTATAGAC+AGG + Chr6:58100666-58100685 MsG0680033146.01.T01:intron 30.0%
AACATGTTGTCTCATATACA+TGG - Chr6:58102334-58102353 None:intergenic 30.0%
AACTTCACTAAGGTTAGAAA+TGG - Chr6:58098884-58098903 None:intergenic 30.0%
AACTTCATAGAAAAAGAGAG+AGG - Chr6:58097819-58097838 None:intergenic 30.0%
AAGGGAGAAAATGTTACAAA+AGG + Chr6:58101228-58101247 MsG0680033146.01.T01:CDS 30.0%
AAGTTTAAGAGAAAGATTGG+AGG - Chr6:58101646-58101665 None:intergenic 30.0%
AATATAATCTGGTGTATGGT+AGG - Chr6:58097681-58097700 None:intergenic 30.0%
AATGGTGAGGTTTGTATTAA+GGG + Chr6:58101210-58101229 MsG0680033146.01.T01:CDS 30.0%
ACCTTCGATGTGATATATAT+TGG - Chr6:58104576-58104595 None:intergenic 30.0%
AGCCAGATATTTACAAATTG+TGG + Chr6:58105093-58105112 MsG0680033146.01.T01:intron 30.0%
AGGGAGAAAATGTTACAAAA+GGG + Chr6:58101229-58101248 MsG0680033146.01.T01:CDS 30.0%
AGTACTACTTAACAAAGAGA+AGG + Chr6:58100270-58100289 MsG0680033146.01.T01:intron 30.0%
AGTTTAAGAGAAAGATTGGA+GGG - Chr6:58101645-58101664 None:intergenic 30.0%
ATATATAAGCTTCCAAAGCT+AGG - Chr6:58105973-58105992 None:intergenic 30.0%
ATCTATTATTCGTGACACAT+TGG - Chr6:58102048-58102067 None:intergenic 30.0%
ATCTCATCAAAACTTCACTA+AGG - Chr6:58098894-58098913 None:intergenic 30.0%
ATTGGAGGGATATAGTATTA+AGG - Chr6:58101631-58101650 None:intergenic 30.0%
ATTTGAGCTATGTCAATTAG+GGG + Chr6:58102498-58102517 MsG0680033146.01.T01:intron 30.0%
CAAAACTGTTGTCCTATTAT+TGG + Chr6:58102303-58102322 MsG0680033146.01.T01:intron 30.0%
CATTTGAGCTATGTCAATTA+GGG + Chr6:58102497-58102516 MsG0680033146.01.T01:intron 30.0%
CCTTCGATGTGATATATATT+GGG - Chr6:58104575-58104594 None:intergenic 30.0%
CTTCGATGTGATATATATTG+GGG - Chr6:58104574-58104593 None:intergenic 30.0%
GAAAATATCACCAATTGAAG+TGG + Chr6:58103045-58103064 MsG0680033146.01.T01:CDS 30.0%
GAGTAAGACTTGTATAGATA+GGG + Chr6:58099734-58099753 MsG0680033146.01.T01:intron 30.0%
GATGTGTTCAAGAAATTGTT+GGG + Chr6:58102365-58102384 MsG0680033146.01.T01:intron 30.0%
GGCAAAATTGTTAGAAACAA+AGG + Chr6:58101788-58101807 MsG0680033146.01.T01:intron 30.0%
GGTGTCTAATGTTTGTAATA+AGG - Chr6:58103641-58103660 None:intergenic 30.0%
GTAAATGTTAAACTGTGTGT+TGG + Chr6:58098785-58098804 MsG0680033146.01.T01:intron 30.0%
GTATTTGATACTAGATCGTT+TGG + Chr6:58101011-58101030 MsG0680033146.01.T01:intron 30.0%
GTCAACTTTCTCTTGTAAAT+AGG + Chr6:58098087-58098106 MsG0680033146.01.T01:intron 30.0%
GTCACTTAAATGAAACTCTT+AGG - Chr6:58099455-58099474 None:intergenic 30.0%
GTCCAAAAGTTGTCAAAAAA+TGG - Chr6:58098446-58098465 None:intergenic 30.0%
GTCTATAGGGTTTACAATTT+GGG - Chr6:58100666-58100685 None:intergenic 30.0%
GTTGCAATATGCAATAGTAA+GGG - Chr6:58102471-58102490 None:intergenic 30.0%
TAAAAGCCAAATTGATCTCA+TGG + Chr6:58104703-58104722 MsG0680033146.01.T01:intron 30.0%
TAACAAATGGTTAGACACTT+AGG - Chr6:58103773-58103792 None:intergenic 30.0%
TAATGGTGAGGTTTGTATTA+AGG + Chr6:58101209-58101228 MsG0680033146.01.T01:CDS 30.0%
TACCATACACCAGATTATAT+TGG + Chr6:58097680-58097699 MsG0680033146.01.T01:CDS 30.0%
TATATAAGCTTCCAAAGCTA+GGG - Chr6:58105972-58105991 None:intergenic 30.0%
TATGAGATTTGAGTGATGAA+TGG - Chr6:58104751-58104770 None:intergenic 30.0%
TATTTGATCAATAAAGGGGT+TGG + Chr6:58105990-58106009 MsG0680033146.01.T01:three_prime_UTR 30.0%
TCATTTGAGCTATGTCAATT+AGG + Chr6:58102496-58102515 MsG0680033146.01.T01:intron 30.0%
TCATTTGAGCTATGTCTAAT+GGG + Chr6:58102249-58102268 MsG0680033146.01.T01:intron 30.0%
TGACTATTTACCTGTCTATA+GGG - Chr6:58100679-58100698 None:intergenic 30.0%
TGAGTAAGACTTGTATAGAT+AGG + Chr6:58099733-58099752 MsG0680033146.01.T01:intron 30.0%
TGATGTGTTCAAGAAATTGT+TGG + Chr6:58102364-58102383 MsG0680033146.01.T01:intron 30.0%
TGTCTATAGGGTTTACAATT+TGG - Chr6:58100667-58100686 None:intergenic 30.0%
TGTTGCAATATGCAATAGTA+AGG - Chr6:58102472-58102491 None:intergenic 30.0%
TGTTTATAAATGTGACCTGA+GGG + Chr6:58100247-58100266 MsG0680033146.01.T01:intron 30.0%
TTATTGATCAAAACTAGCGA+GGG - Chr6:58099795-58099814 None:intergenic 30.0%
TTGGAGGGATATAGTATTAA+GGG - Chr6:58101630-58101649 None:intergenic 30.0%
TTGTATTAAAATACTCCCTC+CGG - Chr6:58098114-58098133 None:intergenic 30.0%
TTGTTTATAAATGTGACCTG+AGG + Chr6:58100246-58100265 MsG0680033146.01.T01:intron 30.0%
TTTATTGATCAAAACTAGCG+AGG - Chr6:58099796-58099815 None:intergenic 30.0%
! AAAGATGAAGACATTAGTCT+TGG - Chr6:58102823-58102842 None:intergenic 30.0%
! AATAAGTCAGCGTTTTTGTT+TGG + Chr6:58101273-58101292 MsG0680033146.01.T01:CDS 30.0%
! GAAACATTGAATCGGTTTAT+CGG + Chr6:58097472-58097491 MsG0680033146.01.T01:CDS 30.0%
! GAATCAAGAAATGGCTATTT+TGG + Chr6:58101155-58101174 MsG0680033146.01.T01:CDS 30.0%
! GGGAGTATGTTATATAACAT+TGG - Chr6:58099086-58099105 None:intergenic 30.0%
! TATTTTCCCTTTACATGACT+TGG + Chr6:58099635-58099654 MsG0680033146.01.T01:intron 30.0%
! TTAGTGTGCAGAGTATTAAT+TGG + Chr6:58099241-58099260 MsG0680033146.01.T01:intron 30.0%
! TTGATTTTATAGACACACGT+TGG + Chr6:58102090-58102109 MsG0680033146.01.T01:intron 30.0%
! TTTGATGATTCTTGTGAAGT+GGG + Chr6:58106088-58106107 MsG0680033146.01.T01:three_prime_UTR 30.0%
! TTTGCAAGTGATAGACATTT+TGG - Chr6:58103675-58103694 None:intergenic 30.0%
! TTTTTGCGAATCACAAATTG+CGG + Chr6:58105587-58105606 MsG0680033146.01.T01:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG + Chr6:58099345-58099364 MsG0680033146.01.T01:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG - Chr6:58099364-58099345 None:intergenic 30.0%
!! AATGGCTATTTTGGATGAAT+CGG + Chr6:58101164-58101183 MsG0680033146.01.T01:CDS 30.0%
!! GAAGTTTTATGTGTTATGCT+AGG - Chr6:58101883-58101902 None:intergenic 30.0%
!! GACATTTTGGTCATCTATTT+TGG - Chr6:58103662-58103681 None:intergenic 30.0%
!! GTTAAACTGTTTTTCTTCGT+TGG + Chr6:58098256-58098275 MsG0680033146.01.T01:intron 30.0%
!! TTCCTCTTTTTCATGTTCAT+GGG + Chr6:58097526-58097545 MsG0680033146.01.T01:CDS 30.0%
!! TTGGCTTTTAGGTAAATGTA+GGG - Chr6:58104693-58104712 None:intergenic 30.0%
!! TTTTGATGATTCTTGTGAAG+TGG + Chr6:58106087-58106106 MsG0680033146.01.T01:three_prime_UTR 30.0%
!!! ATGAGATCAATTTGGCTTTT+AGG - Chr6:58104704-58104723 None:intergenic 30.0%
!!! CAAATCAGTCCATTTTTTTG+TGG - Chr6:58096983-58097002 None:intergenic 30.0%
!!! TATGGTACTCATCTGTTTTT+TGG + Chr6:58101386-58101405 MsG0680033146.01.T01:intron 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + Chr6:58099111-58099130 MsG0680033146.01.T01:intron 30.0%
!!! TTCTTCTTCGGTTTTATTGA+AGG - Chr6:58097292-58097311 None:intergenic 30.0%
!!! TTTGGCTTTTAGGTAAATGT+AGG - Chr6:58104694-58104713 None:intergenic 30.0%
AAACACCAACCTAGAATAAC+CGG - Chr6:58097780-58097799 None:intergenic 35.0%
AAAGAGACCAAGTCATGTAA+AGG - Chr6:58099645-58099664 None:intergenic 35.0%
AAAGTTGGATAGAGATCGAA+TGG - Chr6:58104143-58104162 None:intergenic 35.0%
AAATGAAACTCTTAGGGAGA+GGG - Chr6:58099448-58099467 None:intergenic 35.0%
AACCCATGAACATGAAAAAG+AGG - Chr6:58097531-58097550 None:intergenic 35.0%
AACGTAGAGAATCCAAATCA+AGG - Chr6:58101550-58101569 None:intergenic 35.0%
AAGAGACCAAGTCATGTAAA+GGG - Chr6:58099644-58099663 None:intergenic 35.0%
AATCATATCCTTCCAAAACG+TGG - Chr6:58097628-58097647 None:intergenic 35.0%
AATGATCAAAAATTCGTGGG+TGG + Chr6:58102182-58102201 MsG0680033146.01.T01:intron 35.0%
AATTGATCTCATGGTTCTTG+TGG + Chr6:58104712-58104731 MsG0680033146.01.T01:intron 35.0%
ACACTAGAAATAGTAGGTGT+AGG - Chr6:58104447-58104466 None:intergenic 35.0%
ACTAAGGTTAGAAATGGATG+TGG - Chr6:58098878-58098897 None:intergenic 35.0%
ACTTTGAATTGCCATCCAAA+CGG - Chr6:58102443-58102462 None:intergenic 35.0%
AGAAATAACGTGTCATGAAG+AGG + Chr6:58102001-58102020 MsG0680033146.01.T01:intron 35.0%
AGAATCACGCAAACACATAT+GGG - Chr6:58105271-58105290 None:intergenic 35.0%
ATAGCATAAGCTTCCAAAAC+GGG - Chr6:58101054-58101073 None:intergenic 35.0%
ATAGCCATTTCTTGATTCAC+AGG - Chr6:58101153-58101172 None:intergenic 35.0%
ATCAAACATTGATGCTGAAG+AGG + Chr6:58105799-58105818 MsG0680033146.01.T01:CDS 35.0%
ATCCAAACGGATCCTAAATT+TGG - Chr6:58102430-58102449 None:intergenic 35.0%
ATGGAGATTGGAGATGATTA+AGG - Chr6:58096357-58096376 None:intergenic 35.0%
ATTAAGGAGCTCATCAATAG+AGG + Chr6:58101360-58101379 MsG0680033146.01.T01:CDS 35.0%
ATTGGAGATGATTAAGGTCA+GGG - Chr6:58096351-58096370 None:intergenic 35.0%
CAAGAACCATGAGATCAATT+TGG - Chr6:58104712-58104731 None:intergenic 35.0%
CATAGCATAAGCTTCCAAAA+CGG - Chr6:58101055-58101074 None:intergenic 35.0%
CATGCATTCAGACAACATAA+TGG + Chr6:58102576-58102595 MsG0680033146.01.T01:intron 35.0%
CATTATGTTGTCTGAATGCA+TGG - Chr6:58102578-58102597 None:intergenic 35.0%
CATTTGAGCTATGTCTAATG+GGG + Chr6:58102250-58102269 MsG0680033146.01.T01:intron 35.0%
CCCAATATATATCACATCGA+AGG + Chr6:58104572-58104591 MsG0680033146.01.T01:intron 35.0%
CGCCACAATTTGTAAATATC+TGG - Chr6:58105098-58105117 None:intergenic 35.0%
CTCATTTGAGCTATGTCTAA+TGG + Chr6:58102248-58102267 MsG0680033146.01.T01:intron 35.0%
CTTCTCTTAACACCATTAGA+AGG + Chr6:58097210-58097229 MsG0680033146.01.T01:CDS 35.0%
CTTTCACATTCTTTGTGACT+TGG + Chr6:58102707-58102726 MsG0680033146.01.T01:intron 35.0%
CTTTCTCTTGTAAATAGGAC+CGG + Chr6:58098092-58098111 MsG0680033146.01.T01:intron 35.0%
GAAACCTGTGAATCAAGAAA+TGG + Chr6:58101146-58101165 MsG0680033146.01.T01:CDS 35.0%
GCACAGTTTCATATGACTAT+AGG - Chr6:58101688-58101707 None:intergenic 35.0%
GTCCAATATAATCTGGTGTA+TGG - Chr6:58097685-58097704 None:intergenic 35.0%
GTGACTATTTACCTGTCTAT+AGG - Chr6:58100680-58100699 None:intergenic 35.0%
TAAATGAAACTCTTAGGGAG+AGG - Chr6:58099449-58099468 None:intergenic 35.0%
TAACACCAACCTAGAATAAC+CGG - Chr6:58098284-58098303 None:intergenic 35.0%
TAGTCACGTAACAATGTTTG+TGG - Chr6:58103213-58103232 None:intergenic 35.0%
TATGAAACTGTGCAGAATTC+TGG + Chr6:58101695-58101714 MsG0680033146.01.T01:intron 35.0%
TCAATGTTTGATCCTTCTCT+TGG - Chr6:58105791-58105810 None:intergenic 35.0%
TCTCACTTCGTCAAAAACAA+TGG - Chr6:58098526-58098545 None:intergenic 35.0%
TCTTCATCCAAAAACAGCAA+TGG + Chr6:58096401-58096420 MsG0680033146.01.T01:exon 35.0%
TGATGAATACGAATGGAGAT+TGG - Chr6:58096369-58096388 None:intergenic 35.0%
TGATTCAATATAATGCCACG+TGG + Chr6:58097643-58097662 MsG0680033146.01.T01:CDS 35.0%
TGCACAATGTATCTGTTCAA+AGG - Chr6:58105762-58105781 None:intergenic 35.0%
TGGTTTCATACTGGTGATAT+TGG + Chr6:58101297-58101316 MsG0680033146.01.T01:CDS 35.0%
TGTAACATATGGTCCCTTAA+AGG - Chr6:58101966-58101985 None:intergenic 35.0%
TTATCAGTCTAAATTGGCTG+CGG + Chr6:58101767-58101786 MsG0680033146.01.T01:intron 35.0%
TTCTTATTAATAGGACCGGA+GGG - Chr6:58097979-58097998 None:intergenic 35.0%
TTGACGAAGTGAGAAAAACA+AGG + Chr6:58098532-58098551 MsG0680033146.01.T01:intron 35.0%
TTGATCCATCCACCAAATTT+AGG + Chr6:58102415-58102434 MsG0680033146.01.T01:intron 35.0%
TTGGATGAAGAAGATGTTTG+TGG - Chr6:58096392-58096411 None:intergenic 35.0%
TTTCTTATTAATAGGACCGG+AGG - Chr6:58097980-58097999 None:intergenic 35.0%
TTTGAGCTATGTCAATTAGG+GGG + Chr6:58102499-58102518 MsG0680033146.01.T01:intron 35.0%
TTTGATACTAGATCGTTTGG+AGG + Chr6:58101014-58101033 MsG0680033146.01.T01:intron 35.0%
! AAAAGTGTGGGAAAATGCAT+TGG - Chr6:58103471-58103490 None:intergenic 35.0%
! AAATTTAGGATCCGTTTGGA+TGG + Chr6:58102429-58102448 MsG0680033146.01.T01:intron 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG + Chr6:58099974-58099993 MsG0680033146.01.T01:intron 35.0%
! GTTACTACTGCATTGATAGT+TGG + Chr6:58098367-58098386 MsG0680033146.01.T01:intron 35.0%
! GTTTTATGTGTTATGCTAGG+TGG - Chr6:58101880-58101899 None:intergenic 35.0%
! TCAGCACAATTTGGTTTCAT+CGG + Chr6:58097446-58097465 MsG0680033146.01.T01:CDS 35.0%
! TGTGCAGAGTATTAATTGGA+GGG + Chr6:58099245-58099264 MsG0680033146.01.T01:intron 35.0%
! TTTGTGGTGATGAATACGAA+TGG - Chr6:58096376-58096395 None:intergenic 35.0%
!! ATCGGTTCGAAACATTGAAT+CGG + Chr6:58097464-58097483 MsG0680033146.01.T01:CDS 35.0%
!! ATGGCTATTTTGGATGAATC+GGG + Chr6:58101165-58101184 MsG0680033146.01.T01:CDS 35.0%
!! CTTCCTCTTTTTCATGTTCA+TGG + Chr6:58097525-58097544 MsG0680033146.01.T01:CDS 35.0%
!! TTGTTTGGTTGGTTTCATAC+TGG + Chr6:58101288-58101307 MsG0680033146.01.T01:CDS 35.0%
!!! CTGCATGCTACTTTTATTTG+AGG + Chr6:58101914-58101933 MsG0680033146.01.T01:intron 35.0%
!!! GACACTCATTTTGAAACAGA+GGG + Chr6:58100082-58100101 MsG0680033146.01.T01:intron 35.0%
!!! GTCCATTTTTTTGTGGTGTT+CGG - Chr6:58096976-58096995 None:intergenic 35.0%
AAACAAACGGACCCTACAAA+TGG + Chr6:58104283-58104302 MsG0680033146.01.T01:intron 40.0%
AGATCAGAAATACGGTGAAG+AGG + Chr6:58103123-58103142 MsG0680033146.01.T01:CDS 40.0%
AGATTCAGGTCCGTTTGTTT+GGG - Chr6:58104421-58104440 None:intergenic 40.0%
AGCTATGTTGCAATGTGCAA+CGG - Chr6:58102230-58102249 None:intergenic 40.0%
AGGGAAACTTGGCATATAAG+AGG + Chr6:58106013-58106032 MsG0680033146.01.T01:three_prime_UTR 40.0%
ATATAATGCCACGTGGTACA+CGG + Chr6:58097650-58097669 MsG0680033146.01.T01:CDS 40.0%
ATGGCAAAGGTTACACACTT+TGG - Chr6:58103715-58103734 None:intergenic 40.0%
ATTGGACTAATTCATGGAGG+TGG - Chr6:58096527-58096546 None:intergenic 40.0%
CAAACGGATCCTAAATTTGG+TGG - Chr6:58102427-58102446 None:intergenic 40.0%
CACTACAGCTACGAATAAAC+CGG - Chr6:58097746-58097765 None:intergenic 40.0%
CTACGAATAAACCGGAGTTT+CGG - Chr6:58097738-58097757 None:intergenic 40.0%
CTACGTTAAATGCTGGATCT+TGG - Chr6:58097892-58097911 None:intergenic 40.0%
CTCCGAACACCACAAAAAAA+TGG + Chr6:58096971-58096990 MsG0680033146.01.T01:intron 40.0%
GAGAATCACGCAAACACATA+TGG - Chr6:58105272-58105291 None:intergenic 40.0%
GATGTGTATGCTGCGTTTAA+TGG - Chr6:58097150-58097169 None:intergenic 40.0%
GATTGGAGATGATTAAGGTC+AGG - Chr6:58096352-58096371 None:intergenic 40.0%
GGACTTAGAACAAAGTTGCA+TGG - Chr6:58104553-58104572 None:intergenic 40.0%
GGTATTTGAATCTTGTGGGT+CGG + Chr6:58101337-58101356 MsG0680033146.01.T01:CDS 40.0%
GTTATGGAGGCTGATGTTAA+TGG + Chr6:58101192-58101211 MsG0680033146.01.T01:CDS 40.0%
TAATTCATGGAGGTGGGAAT+GGG - Chr6:58096520-58096539 None:intergenic 40.0%
TACGAATAAACCGGAGTTTC+GGG - Chr6:58097737-58097756 None:intergenic 40.0%
TACTAATACTCTACTCCCTC+CGG + Chr6:58100111-58100130 MsG0680033146.01.T01:intron 40.0%
TCAAAGCTCAACATTCCACT+CGG + Chr6:58097258-58097277 MsG0680033146.01.T01:CDS 40.0%
TCAAATCCTTTGCCAGAAGA+TGG + Chr6:58101099-58101118 MsG0680033146.01.T01:CDS 40.0%
TCAGACAACATAATGGCACT+TGG + Chr6:58102583-58102602 MsG0680033146.01.T01:intron 40.0%
TCATATCATTAACCAGTGCC+CGG + Chr6:58100383-58100402 MsG0680033146.01.T01:intron 40.0%
TCTAGTCGATCGTTCAAAGT+TGG - Chr6:58104158-58104177 None:intergenic 40.0%
TGAGACAACATGTTGACACT+TGG + Chr6:58102340-58102359 MsG0680033146.01.T01:intron 40.0%
TGAGATTATGAGAACCTCGA+TGG - Chr6:58096619-58096638 None:intergenic 40.0%
TGATCAATAAAGGGGTTGGA+GGG + Chr6:58105994-58106013 MsG0680033146.01.T01:three_prime_UTR 40.0%
TGCTTATAAATGTGACCGGA+GGG - Chr6:58100129-58100148 None:intergenic 40.0%
TGGCTTAGGCAAAACCTAAA+CGG - Chr6:58102803-58102822 None:intergenic 40.0%
TGTGCAATCATTCCAAGAGA+AGG + Chr6:58105776-58105795 MsG0680033146.01.T01:CDS 40.0%
TTGATCAATAAAGGGGTTGG+AGG + Chr6:58105993-58106012 MsG0680033146.01.T01:three_prime_UTR 40.0%
TTGCTTATAAATGTGACCGG+AGG - Chr6:58100130-58100149 None:intergenic 40.0%
TTGGACTAATTCATGGAGGT+GGG - Chr6:58096526-58096545 None:intergenic 40.0%
TTGTTAAGTAGTACTCCCTC+AGG - Chr6:58100265-58100284 None:intergenic 40.0%
! AATCTGGCTCATTGCATGTT+TGG - Chr6:58105047-58105066 None:intergenic 40.0%
! CAAGATTTTACGTCGTCTTG+TGG + Chr6:58105910-58105929 MsG0680033146.01.T01:CDS 40.0%
! CACCAAATTTAGGATCCGTT+TGG + Chr6:58102425-58102444 MsG0680033146.01.T01:intron 40.0%
! CATCACTCTGCATTGATAGT+TGG + Chr6:58097865-58097884 MsG0680033146.01.T01:intron 40.0%
! GAGAAGCTTTGATTCTGAGT+CGG - Chr6:58097196-58097215 None:intergenic 40.0%
! GGGTGAGAAGTATGTATTTG+TGG - Chr6:58103399-58103418 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG + Chr6:58099244-58099263 MsG0680033146.01.T01:intron 40.0%
! TCTTCACCGTATTTCTGATC+TGG - Chr6:58103124-58103143 None:intergenic 40.0%
!! AATGTTGAGCTTTGAAGCTG+CGG - Chr6:58097253-58097272 None:intergenic 40.0%
!! AGTCAGCGTTTTTGTTTGGT+TGG + Chr6:58101277-58101296 MsG0680033146.01.T01:CDS 40.0%
!! ATCGTTTGGAGGAAGCATTT+GGG + Chr6:58101025-58101044 MsG0680033146.01.T01:CDS 40.0%
!! ATGTTCATGGGTTGATTGCT+GGG + Chr6:58097538-58097557 MsG0680033146.01.T01:CDS 40.0%
!! ATTGATTTGTCGTCCTCGTA+AGG + Chr6:58096935-58096954 MsG0680033146.01.T01:intron 40.0%
!! GAAGACATTAGTCTTGGCTT+AGG - Chr6:58102817-58102836 None:intergenic 40.0%
!!! CGACACTCATTTTGAAACAG+AGG + Chr6:58100081-58100100 MsG0680033146.01.T01:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + Chr6:58099349-58099368 MsG0680033146.01.T01:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - Chr6:58099368-58099349 None:intergenic 40.0%
!!! TGCATGTTTGGTGCACTTTT+AGG - Chr6:58105035-58105054 None:intergenic 40.0%
AACGGTGAGGGTTCAAACTT+CGG - Chr6:58102212-58102231 None:intergenic 45.0%
AAGATGGTTCCCACAAAGCT+GGG + Chr6:58101115-58101134 MsG0680033146.01.T01:CDS 45.0%
AAGGAGCTCATCAATAGAGG+AGG + Chr6:58101363-58101382 MsG0680033146.01.T01:CDS 45.0%
ACACATCAGGAACCACAAGT+CGG + Chr6:58097403-58097422 MsG0680033146.01.T01:CDS 45.0%
ACGACGTAAAATCTTGCCAG+TGG - Chr6:58105906-58105925 None:intergenic 45.0%
AGGACAGCATCCACTTCAAT+TGG - Chr6:58103058-58103077 None:intergenic 45.0%
AGTCATGAAGTCCCTAGCTT+TGG + Chr6:58105958-58105977 MsG0680033146.01.T01:exon 45.0%
ATATCATTAACCAGTGCCCG+GGG + Chr6:58100385-58100404 MsG0680033146.01.T01:intron 45.0%
ATCAAAACTAGCGAGGGTTG+TGG - Chr6:58099789-58099808 None:intergenic 45.0%
ATCGTTGGGTTTGATTCCAG+CGG - Chr6:58096571-58096590 None:intergenic 45.0%
ATGAGAACCTCGATGGTGTT+GGG - Chr6:58096612-58096631 None:intergenic 45.0%
CAAACAAACGGACCTGAATC+TGG + Chr6:58104420-58104439 MsG0680033146.01.T01:intron 45.0%
CAGATTCAGGTCCGTTTGTT+TGG - Chr6:58104422-58104441 None:intergenic 45.0%
CATATCATTAACCAGTGCCC+GGG + Chr6:58100384-58100403 MsG0680033146.01.T01:intron 45.0%
CCATCAAAGTAACCCTGAAC+CGG + Chr6:58097707-58097726 MsG0680033146.01.T01:CDS 45.0%
CTAATTCATGGAGGTGGGAA+TGG - Chr6:58096521-58096540 None:intergenic 45.0%
CTCTTGTAAATAGGACCGGA+GGG + Chr6:58098096-58098115 MsG0680033146.01.T01:intron 45.0%
GAATCTTGTGGGTCGGATTA+AGG + Chr6:58101344-58101363 MsG0680033146.01.T01:CDS 45.0%
GCTCATCAATAGAGGAGGTA+TGG + Chr6:58101368-58101387 MsG0680033146.01.T01:intron 45.0%
GGAAGCTTATGCTATGACTG+AGG + Chr6:58101059-58101078 MsG0680033146.01.T01:CDS 45.0%
GGCACTTGGATGATGTGTTT+AGG + Chr6:58102597-58102616 MsG0680033146.01.T01:intron 45.0%
GGCGTACAAGAAAACTCTTC+TGG + Chr6:58105114-58105133 MsG0680033146.01.T01:intron 45.0%
GTACTAACACATACTCCCTC+CGG + Chr6:58097961-58097980 MsG0680033146.01.T01:intron 45.0%
TATGAGAACCTCGATGGTGT+TGG - Chr6:58096613-58096632 None:intergenic 45.0%
TCTCTTGTAAATAGGACCGG+AGG + Chr6:58098095-58098114 MsG0680033146.01.T01:intron 45.0%
TGAACGATCGACTAGAGTGA+GGG + Chr6:58104162-58104181 MsG0680033146.01.T01:intron 45.0%
TTGAACGATCGACTAGAGTG+AGG + Chr6:58104161-58104180 MsG0680033146.01.T01:intron 45.0%
! ATGGGTGAGGTCGAATTTTC+CGG - Chr6:58096502-58096521 None:intergenic 45.0%
! CGGATCCTAAATTTGGTGGA+TGG - Chr6:58102423-58102442 None:intergenic 45.0%
! CGGATTGGACTAATTCATGG+AGG - Chr6:58096530-58096549 None:intergenic 45.0%
! GATGGCGGTCCAATATAATC+TGG - Chr6:58097692-58097711 None:intergenic 45.0%
! GATTCTCTGCATCCACGTTT+TGG + Chr6:58097613-58097632 MsG0680033146.01.T01:CDS 45.0%
! GGAGTGCCAGATCAGAAATA+CGG + Chr6:58103115-58103134 MsG0680033146.01.T01:CDS 45.0%
! GTTCAGGGTTACTTTGATGG+CGG - Chr6:58097707-58097726 None:intergenic 45.0%
!! AAGACGTGGGGTTCTAAACA+GGG + Chr6:58102115-58102134 MsG0680033146.01.T01:intron 45.0%
!! ACCAAATTGTGCTGACTCAG+TGG - Chr6:58097441-58097460 None:intergenic 45.0%
!! ATGGGTTGTGAGTTGATGCT+AGG - Chr6:58105253-58105272 None:intergenic 45.0%
!! CAGCGGATTGGACTAATTCA+TGG - Chr6:58096533-58096552 None:intergenic 45.0%
!! CATGTTCATGGGTTGATTGC+TGG + Chr6:58097537-58097556 MsG0680033146.01.T01:CDS 45.0%
!! CCAAATTGTGCTGACTCAGT+GGG - Chr6:58097440-58097459 None:intergenic 45.0%
!! GATCGTTTGGAGGAAGCATT+TGG + Chr6:58101024-58101043 MsG0680033146.01.T01:intron 45.0%
!! GGAATTTTTCAGCGACGGAT+TGG - Chr6:58096455-58096474 None:intergenic 45.0%
!! TCGTTTGGAGGAAGCATTTG+GGG + Chr6:58101026-58101045 MsG0680033146.01.T01:CDS 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + Chr6:58099348-58099367 MsG0680033146.01.T01:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - Chr6:58099367-58099348 None:intergenic 45.0%
!!! CTGTTTTTCTTCGTTGGCTC+CGG + Chr6:58098262-58098281 MsG0680033146.01.T01:intron 45.0%
!!! GCACTTTTTCTCCACACATC+AGG + Chr6:58097390-58097409 MsG0680033146.01.T01:CDS 45.0%
!!! GCGGTTTCCATTGCTGTTTT+TGG - Chr6:58096411-58096430 None:intergenic 45.0%
!! ATTTATATAAAAAAAATGAA+TGG + Chr6:58104075-58104094 MsG0680033146.01.T01:intron 5.0%
!!! ATATATAGAAATTTTTTTTA+GGG + Chr6:58098936-58098955 MsG0680033146.01.T01:intron 5.0%
!!! ATTATTTTTAAATTTCATTT+TGG - Chr6:58103834-58103853 None:intergenic 5.0%
!!! ATTTTTTTTATATAAATATC+TGG - Chr6:58104072-58104091 None:intergenic 5.0%
!!! TAAAAAAAAAAATAGATTTT+GGG + Chr6:58104201-58104220 MsG0680033146.01.T01:intron 5.0%
!!! TATATATAGAAATTTTTTTT+AGG + Chr6:58098935-58098954 MsG0680033146.01.T01:intron 5.0%
!!! TTAAAAAAAAAAATAGATTT+TGG + Chr6:58104200-58104219 MsG0680033146.01.T01:intron 5.0%
!!! TTATATACATTATTTTATTT+CGG + Chr6:58101425-58101444 MsG0680033146.01.T01:intron 5.0%
!!! TTGTTAATTATTTATTTTTT+TGG + Chr6:58100741-58100760 MsG0680033146.01.T01:intron 5.0%
!!! TTTTTTTTATATAAATATCT+GGG - Chr6:58104071-58104090 None:intergenic 5.0%
AAAGGGGTTGGAGGGAAACT+TGG + Chr6:58106002-58106021 MsG0680033146.01.T01:three_prime_UTR 50.0%
AATCTTGCCAGTGGCTGTCT+TGG - Chr6:58105897-58105916 None:intergenic 50.0%
ACACACGTTGGAGAAGACGT+GGG + Chr6:58102102-58102121 MsG0680033146.01.T01:intron 50.0%
ATCTTGCCAGTGGCTGTCTT+GGG - Chr6:58105896-58105915 None:intergenic 50.0%
CATAGTAGCAGCAAGCCATG+AGG - Chr6:58099763-58099782 None:intergenic 50.0%
CATTAACGAACCATCCGACG+TGG + Chr6:58097368-58097387 MsG0680033146.01.T01:CDS 50.0%
CCCACTGAGTCAGCACAATT+TGG + Chr6:58097437-58097456 MsG0680033146.01.T01:CDS 50.0%
GAAGATGGTTCCCACAAAGC+TGG + Chr6:58101114-58101133 MsG0680033146.01.T01:CDS 50.0%
GACTTGTGGTTCCTGATGTG+TGG - Chr6:58097404-58097423 None:intergenic 50.0%
GCAGCGTTGTTGCCTTCTAA+TGG - Chr6:58097225-58097244 None:intergenic 50.0%
GCTCAACATTCCACTCGGTA+CGG + Chr6:58097263-58097282 MsG0680033146.01.T01:CDS 50.0%
GCTTTGTGGGAACCATCTTC+TGG - Chr6:58101114-58101133 None:intergenic 50.0%
GGAGATGAGATGATTGGCAG+CGG - Chr6:58096550-58096569 None:intergenic 50.0%
GGAGGCTGATGTTAATGGTG+AGG + Chr6:58101197-58101216 MsG0680033146.01.T01:CDS 50.0%
GGATTGGAGTAATCCGGTGA+GGG - Chr6:58096439-58096458 None:intergenic 50.0%
GGTATGCTTAACCAGTGTCC+CGG - Chr6:58100331-58100350 None:intergenic 50.0%
GTAGGTGTAGGACCAGATTC+AGG - Chr6:58104435-58104454 None:intergenic 50.0%
GTATAGATAGGGACGCCTCA+TGG + Chr6:58099745-58099764 MsG0680033146.01.T01:intron 50.0%
GTATGCTTAACCAGTGTCCC+GGG - Chr6:58100330-58100349 None:intergenic 50.0%
GTGTTCGGAGTTTGAACCTC+AGG - Chr6:58096961-58096980 None:intergenic 50.0%
GTTGCAATGTGCAACGGTGA+GGG - Chr6:58102224-58102243 None:intergenic 50.0%
TATGCTTAACCAGTGTCCCG+GGG - Chr6:58100329-58100348 None:intergenic 50.0%
TCCAGCGGAGATGAGATGAT+TGG - Chr6:58096556-58096575 None:intergenic 50.0%
TCGTAGCTGTAGTGCTTCGT+TGG + Chr6:58097752-58097771 MsG0680033146.01.T01:CDS 50.0%
TGAAGTGGATGCTGTCCTCT+TGG + Chr6:58103060-58103079 MsG0680033146.01.T01:CDS 50.0%
TGAGATGATTGGCAGCGGAT+TGG - Chr6:58096545-58096564 None:intergenic 50.0%
TGGCTCCGGTTATTCTAGGT+TGG + Chr6:58097772-58097791 MsG0680033146.01.T01:intron 50.0%
TGGGAACCATCTTCTGGCAA+AGG - Chr6:58101108-58101127 None:intergenic 50.0%
TGTTGCAATGTGCAACGGTG+AGG - Chr6:58102225-58102244 None:intergenic 50.0%
TTGAAGGAAACCGTACCGAG+TGG - Chr6:58097276-58097295 None:intergenic 50.0%
TTTGAACCTCAGGCCTTACG+AGG - Chr6:58096951-58096970 None:intergenic 50.0%
! AACCGGAGTTTCGGGTAAAC+CGG - Chr6:58097729-58097748 None:intergenic 50.0%
! AACCGGTTTACCCGAAACTC+CGG + Chr6:58097724-58097743 MsG0680033146.01.T01:CDS 50.0%
! AGTTTCGGGTAAACCGGTTC+AGG - Chr6:58097723-58097742 None:intergenic 50.0%
! CCGGTTCAGGGTTACTTTGA+TGG - Chr6:58097710-58097729 None:intergenic 50.0%
! GTAGCTCAGGCAGTTGCTTT+CGG + Chr6:58103094-58103113 MsG0680033146.01.T01:CDS 50.0%
! GTTTCGGGTAAACCGGTTCA+GGG - Chr6:58097722-58097741 None:intergenic 50.0%
! TGAAACCGAGTTCGCTGACT+CGG - Chr6:58097343-58097362 None:intergenic 50.0%
! TGAGAACCTCGATGGTGTTG+GGG - Chr6:58096611-58096630 None:intergenic 50.0%
!! AGAAAAAGTGCCACGTCGGA+TGG - Chr6:58097381-58097400 None:intergenic 50.0%
!! AGAGGTGTCGACGTTACTTG+AGG + Chr6:58102019-58102038 MsG0680033146.01.T01:intron 50.0%
!! AGCGACGGATTGGAGTAATC+CGG - Chr6:58096445-58096464 None:intergenic 50.0%
!! CTCTGCATCCACGTTTTGGA+AGG + Chr6:58097617-58097636 MsG0680033146.01.T01:CDS 50.0%
!! GAAGACGTGGGGTTCTAAAC+AGG + Chr6:58102114-58102133 MsG0680033146.01.T01:intron 50.0%
!! GGAGGGGAATTTTTCAGCGA+CGG - Chr6:58096460-58096479 None:intergenic 50.0%
!! GGTTTATCGGCTCAGTGAGT+TGG + Chr6:58097485-58097504 MsG0680033146.01.T01:CDS 50.0%
!! GTGGAGAAAAAGTGCCACGT+CGG - Chr6:58097385-58097404 None:intergenic 50.0%
!! TCGTTGGCTCCGGTTATTCT+AGG + Chr6:58097768-58097787 MsG0680033146.01.T01:CDS 50.0%
AAATGCTAACCGGTGCTCCC+CGG - Chr6:58100405-58100424 None:intergenic 55.0%
AACCACAAGTCGGCCTAAGG+GGG + Chr6:58097413-58097432 MsG0680033146.01.T01:CDS 55.0%
AGGAACCACAAGTCGGCCTA+AGG + Chr6:58097410-58097429 MsG0680033146.01.T01:CDS 55.0%
ATGCTTAACCAGTGTCCCGG+GGG - Chr6:58100328-58100347 None:intergenic 55.0%
CACACGTTGGAGAAGACGTG+GGG + Chr6:58102103-58102122 MsG0680033146.01.T01:intron 55.0%
CCAAACCGAGTCAGCGAACT+CGG + Chr6:58097335-58097354 MsG0680033146.01.T01:CDS 55.0%
CTACGTCTGGATGTGCCAAG+AGG - Chr6:58103078-58103097 None:intergenic 55.0%
GAACCACAAGTCGGCCTAAG+GGG + Chr6:58097412-58097431 MsG0680033146.01.T01:CDS 55.0%
GACACACGTTGGAGAAGACG+TGG + Chr6:58102101-58102120 MsG0680033146.01.T01:intron 55.0%
GCCAATCATCTCATCTCCGC+TGG + Chr6:58096552-58096571 MsG0680033146.01.T01:CDS 55.0%
GCTGGGTTGCTGAGTTCACT+CGG + Chr6:58097555-58097574 MsG0680033146.01.T01:CDS 55.0%
GGAACCACAAGTCGGCCTAA+GGG + Chr6:58097411-58097430 MsG0680033146.01.T01:CDS 55.0%
GGATGAATCGGGTCGCGTTA+TGG + Chr6:58101176-58101195 MsG0680033146.01.T01:CDS 55.0%
GTGAGAGCGACGACATCGTT+GGG - Chr6:58096585-58096604 None:intergenic 55.0%
TAATCCGGTGAGGGTGGTTG+CGG - Chr6:58096430-58096449 None:intergenic 55.0%
TAATGCCACGTGGTACACGG+CGG + Chr6:58097653-58097672 MsG0680033146.01.T01:CDS 55.0%
TCTTTGCCCAAGACAGCCAC+TGG + Chr6:58105887-58105906 MsG0680033146.01.T01:CDS 55.0%
TGAATCGGGTCGCGTTATGG+AGG + Chr6:58101179-58101198 MsG0680033146.01.T01:CDS 55.0%
TGGTTCCCACAAAGCTGGGT+CGG + Chr6:58101119-58101138 MsG0680033146.01.T01:CDS 55.0%
TTGGAGTAATCCGGTGAGGG+TGG - Chr6:58096436-58096455 None:intergenic 55.0%
! AACCTCGATGGTGTTGGGGA+AGG - Chr6:58096607-58096626 None:intergenic 55.0%
! CGGATTGGAGTAATCCGGTG+AGG - Chr6:58096440-58096459 None:intergenic 55.0%
! GAATTTTCCGGCGACGGAGA+TGG - Chr6:58096490-58096509 None:intergenic 55.0%
! GAGGTCGAATTTTCCGGCGA+CGG - Chr6:58096496-58096515 None:intergenic 55.0%
!! AGCATTTGGGGCACCCGTTT+TGG + Chr6:58101038-58101057 MsG0680033146.01.T01:CDS 55.0%
!! CGAGTTCGCTGACTCGGTTT+GGG - Chr6:58097337-58097356 None:intergenic 55.0%
!! CTGTAGTGCTTCGTTGGCTC+CGG + Chr6:58097758-58097777 MsG0680033146.01.T01:CDS 55.0%
!! TGCGTTTAATGGTGCTGCCG+TGG - Chr6:58097139-58097158 None:intergenic 55.0%
!! TTAATGGTGCTGCCGTGGCT+CGG - Chr6:58097134-58097153 None:intergenic 55.0%
AATGCTAACCGGTGCTCCCC+GGG - Chr6:58100404-58100423 None:intergenic 60.0%
CACCTTCCCCAACACCATCG+AGG + Chr6:58096602-58096621 MsG0680033146.01.T01:CDS 60.0%
CATGGAGGTGGGAATGGGTG+AGG - Chr6:58096515-58096534 None:intergenic 60.0%
CCCACAAAGCTGGGTCGGTT+GGG + Chr6:58101124-58101143 MsG0680033146.01.T01:CDS 60.0%
CGTGATTCGAGTCCGAGCCA+CGG + Chr6:58097119-58097138 MsG0680033146.01.T01:CDS 60.0%
CTCGGACTCGAATCACGGCA+AGG - Chr6:58097116-58097135 None:intergenic 60.0%
GAAACCGCAACCACCCTCAC+CGG + Chr6:58096423-58096442 MsG0680033146.01.T01:CDS 60.0%
GCAACTGCCTGAGCTACGTC+TGG - Chr6:58103091-58103110 None:intergenic 60.0%
GGCACATCCAGACGTAGCTC+AGG + Chr6:58103081-58103100 MsG0680033146.01.T01:CDS 60.0%
GGTGAGAGCGACGACATCGT+TGG - Chr6:58096586-58096605 None:intergenic 60.0%
TCCCAACCGACCCAGCTTTG+TGG - Chr6:58101128-58101147 None:intergenic 60.0%
TCCCACAAAGCTGGGTCGGT+TGG + Chr6:58101123-58101142 MsG0680033146.01.T01:CDS 60.0%
TGACTCAGTGGGACCCCCTT+AGG - Chr6:58097429-58097448 None:intergenic 60.0%
TGTCGTCCTCGTAAGGCCTG+AGG + Chr6:58096942-58096961 MsG0680033146.01.T01:intron 60.0%
TTGCTGAGTTCACTCGGCGC+CGG + Chr6:58097561-58097580 MsG0680033146.01.T01:CDS 60.0%
! CCCAACCGACCCAGCTTTGT+GGG - Chr6:58101127-58101146 None:intergenic 60.0%
! CGTGGCTCGGACTCGAATCA+CGG - Chr6:58097121-58097140 None:intergenic 60.0%
!! CCGAGTTCGCTGACTCGGTT+TGG - Chr6:58097338-58097357 None:intergenic 60.0%
ACGGAGATGGCACGACGGGA+GGG - Chr6:58096477-58096496 None:intergenic 65.0%
AGGAACCGCCGTGTACCACG+TGG - Chr6:58097661-58097680 None:intergenic 65.0%
GTCCTGCTAACCGATGCCCC+CGG + Chr6:58100309-58100328 MsG0680033146.01.T01:intron 65.0%
TCCTGCTAACCGATGCCCCC+GGG + Chr6:58100310-58100329 MsG0680033146.01.T01:intron 65.0%
! AACCAGTGTCCCGGGGGCAT+CGG - Chr6:58100322-58100341 None:intergenic 65.0%
!! GACCCCCTTAGGCCGACTTG+TGG - Chr6:58097418-58097437 None:intergenic 65.0%
AACCGATGCCCCCGGGACAC+TGG + Chr6:58100317-58100336 MsG0680033146.01.T01:intron 70.0%
CGGAGATGGCACGACGGGAG+GGG - Chr6:58096476-58096495 None:intergenic 70.0%
CGGCGACGGAGATGGCACGA+CGG - Chr6:58096482-58096501 None:intergenic 70.0%
CGTCGTGCCATCTCCGTCGC+CGG + Chr6:58096480-58096499 MsG0680033146.01.T01:CDS 70.0%
GACGGAGATGGCACGACGGG+AGG - Chr6:58096478-58096497 None:intergenic 70.0%
GCAGAGAATCTCCCCGCCGC+CGG - Chr6:58097603-58097622 None:intergenic 70.0%
GGCGACGGAGATGGCACGAC+GGG - Chr6:58096481-58096500 None:intergenic 70.0%
! AACCAGTGCCCGGGGAGCAC+CGG + Chr6:58100393-58100412 MsG0680033146.01.T01:intron 70.0%
! CTGAGTTCACTCGGCGCCGG+AGG + Chr6:58097564-58097583 MsG0680033146.01.T01:CDS 70.0%
! TTCACTCGGCGCCGGAGGTG+CGG + Chr6:58097569-58097588 MsG0680033146.01.T01:CDS 70.0%
!! TCCCGGGGGCATCGGTTAGC+AGG - Chr6:58100314-58100333 None:intergenic 70.0%
AACCGGTGCTCCCCGGGCAC+TGG - Chr6:58100398-58100417 None:intergenic 75.0%
AGGTGCGGTGGCGTTGCCGG+CGG + Chr6:58097584-58097603 MsG0680033146.01.T01:CDS 75.0%
CGGCAACGCCACCGCACCTC+CGG - Chr6:58097583-58097602 None:intergenic 75.0%
! CGGAGGTGCGGTGGCGTTGC+CGG + Chr6:58097581-58097600 MsG0680033146.01.T01:CDS 75.0%
! TGCGGTGGCGTTGCCGGCGG+CGG + Chr6:58097587-58097606 MsG0680033146.01.T01:CDS 80.0%
!! ACTCGGCGCCGGAGGTGCGG+TGG + Chr6:58097572-58097591 MsG0680033146.01.T01:CDS 80.0%
! CGGTGGCGTTGCCGGCGGCG+GGG + Chr6:58097589-58097608 MsG0680033146.01.T01:CDS 85.0%
! GCGGTGGCGTTGCCGGCGGC+GGG + Chr6:58097588-58097607 MsG0680033146.01.T01:CDS 85.0%
Chromosome Type Strat End Strand Name
Chr6 gene 58096337 58106155 58096337 ID=MsG0680033146.01;Name=MsG0680033146.01
Chr6 mRNA 58096337 58106155 58096337 ID=MsG0680033146.01.T01;Parent=MsG0680033146.01;Name=MsG0680033146.01.T01;_AED=0.42;_eAED=0.42;_QI=83|1|1|1|1|1|5|197|515
Chr6 exon 58096337 58096623 58096337 ID=MsG0680033146.01.T01:exon:4630;Parent=MsG0680033146.01.T01
Chr6 exon 58097099 58097789 58097099 ID=MsG0680033146.01.T01:exon:4631;Parent=MsG0680033146.01.T01
Chr6 exon 58101025 58101384 58101025 ID=MsG0680033146.01.T01:exon:4632;Parent=MsG0680033146.01.T01
Chr6 exon 58103041 58103144 58103041 ID=MsG0680033146.01.T01:exon:4633;Parent=MsG0680033146.01.T01
Chr6 exon 58105770 58106155 58105770 ID=MsG0680033146.01.T01:exon:4634;Parent=MsG0680033146.01.T01
Chr6 five_prime_UTR 58096337 58096419 58096337 ID=MsG0680033146.01.T01:five_prime_utr;Parent=MsG0680033146.01.T01
Chr6 CDS 58096420 58096623 58096420 ID=MsG0680033146.01.T01:cds;Parent=MsG0680033146.01.T01
Chr6 CDS 58097099 58097789 58097099 ID=MsG0680033146.01.T01:cds;Parent=MsG0680033146.01.T01
Chr6 CDS 58101025 58101384 58101025 ID=MsG0680033146.01.T01:cds;Parent=MsG0680033146.01.T01
Chr6 CDS 58103041 58103144 58103041 ID=MsG0680033146.01.T01:cds;Parent=MsG0680033146.01.T01
Chr6 CDS 58105770 58105958 58105770 ID=MsG0680033146.01.T01:cds;Parent=MsG0680033146.01.T01
Chr6 three_prime_UTR 58105959 58106155 58105959 ID=MsG0680033146.01.T01:three_prime_utr;Parent=MsG0680033146.01.T01
Gene Sequence

>MsG0680033146.01.T01

ATGGAAACCGCAACCACCCTCACCGGATTACTCCAATCCGTCGCTGAAAAATTCCCCTCCCGTCGTGCCATCTCCGTCGCCGGAAAATTCGACCTCACCCATTCCCACCTCCATGAATTAGTCCAATCCGCTGCCAATCATCTCATCTCCGCTGGAATCAAACCCAACGATGTCGTCGCTCTCACCTTCCCCAACACCATCGAGTATGTTATCATGTTCCTTGCCGTGATTCGAGTCCGAGCCACGGCAGCACCATTAAACGCAGCATACACATCAGAAGAATTCGAGTTTTATCTCTCCGACTCAGAATCAAAGCTTCTCTTAACACCATTAGAAGGCAACAACGCTGCTCAAACCGCAGCTTCAAAGCTCAACATTCCACTCGGTACGGTTTCCTTCAATAAAACCGAAGAAGAAACAAAAATTTCAATCTCGCTGACCCAAACCGAGTCAGCGAACTCGGTTTCAGAACTCATTAACGAACCATCCGACGTGGCACTTTTTCTCCACACATCAGGAACCACAAGTCGGCCTAAGGGGGTCCCACTGAGTCAGCACAATTTGGTTTCATCGGTTCGAAACATTGAATCGGTTTATCGGCTCAGTGAGTTGGATTCGACTGTGATTGTTCTTCCTCTTTTTCATGTTCATGGGTTGATTGCTGGGTTGCTGAGTTCACTCGGCGCCGGAGGTGCGGTGGCGTTGCCGGCGGCGGGGAGATTCTCTGCATCCACGTTTTGGAAGGATATGATTCAATATAATGCCACGTGGTACACGGCGGTTCCTACCATACACCAGATTATATTGGACCGCCATCAAAGTAACCCTGAACCGGTTTACCCGAAACTCCGGTTTATTCGTAGCTGTAGTGCTTCGTTGGCTCCGGTTATTCTAGATCGTTTGGAGGAAGCATTTGGGGCACCCGTTTTGGAAGCTTATGCTATGACTGAGGCTACTCATTTGATGTGTTCAAATCCTTTGCCAGAAGATGGTTCCCACAAAGCTGGGTCGGTTGGGAAACCTGTGAATCAAGAAATGGCTATTTTGGATGAATCGGGTCGCGTTATGGAGGCTGATGTTAATGGTGAGGTTTGTATTAAGGGAGAAAATGTTACAAAAGGGTATAAGAATAATGAAGAAGCTAATAAGTCAGCGTTTTTGTTTGGTTGGTTTCATACTGGTGATATTGGTTACTTTGATTCTGATGGGTATTTGAATCTTGTGGGTCGGATTAAGGAGCTCATCAATAGAGGAGGAGAGAAAATATCACCAATTGAAGTGGATGCTGTCCTCTTGGCACATCCAGACGTAGCTCAGGCAGTTGCTTTCGGAGTGCCAGATCAGAAATACGGTGAAGAGATACATTGTGCAATCATTCCAAGAGAAGGATCAAACATTGATGCTGAAGAGGTGCTAAAATATTGCAAGAAGAATCTCACATCTTTTAAAGTTCCCAAAAAGGTTTTCATTACTGATTCTTTGCCCAAGACAGCCACTGGCAAGATTTTACGTCGTCTTGTGGCAGAACACTTTGTCTCTCAAGCTTGA
Protein sequence

>MsG0680033146.01.T01

METATTLTGLLQSVAEKFPSRRAISVAGKFDLTHSHLHELVQSAANHLISAGIKPNDVVALTFPNTIEYVIMFLAVIRVRATAAPLNAAYTSEEFEFYLSDSESKLLLTPLEGNNAAQTAASKLNIPLGTVSFNKTEEETKISISLTQTESANSVSELINEPSDVALFLHTSGTTSRPKGVPLSQHNLVSSVRNIESVYRLSELDSTVIVLPLFHVHGLIAGLLSSLGAGGAVALPAAGRFSASTFWKDMIQYNATWYTAVPTIHQIILDRHQSNPEPVYPKLRFIRSCSASLAPVILDRLEEAFGAPVLEAYAMTEATHLMCSNPLPEDGSHKAGSVGKPVNQEMAILDESGRVMEADVNGEVCIKGENVTKGYKNNEEANKSAFLFGWFHTGDIGYFDSDGYLNLVGRIKELINRGGEKISPIEVDAVLLAHPDVAQAVAFGVPDQKYGEEIHCAIIPREGSNIDAEEVLKYCKKNLTSFKVPKKVFITDSLPKTATGKILRRLVAEHFVSQA*