AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680033744.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680033744.01.T01 MTR_3g089075 53.200 250 109 5 190 437 342 585 6.85e-88 291
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680033744.01.T01 AT4G25515 56.042 480 168 9 63 522 57 513 2.23e-152 454
MsG0680033744.01.T01 AT5G62090 60.811 370 131 7 190 556 309 667 2.37e-149 451
MsG0680033744.01.T01 AT5G62090 60.811 370 131 7 190 556 309 667 2.37e-149 451
MsG0680033744.01.T01 AT5G62090 60.811 370 131 7 190 556 309 667 2.37e-149 451
MsG0680033744.01.T01 AT4G25520 51.873 534 178 12 63 542 85 593 4.01e-139 422
MsG0680033744.01.T01 AT4G25520 51.873 534 178 12 63 542 85 593 4.01e-139 422
MsG0680033744.01.T01 AT1G43850 54.000 250 107 5 190 437 323 566 3.37e-84 281
MsG0680033744.01.T01 AT1G43850 54.000 250 107 5 190 437 323 566 3.37e-84 281

Find 141 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTAACTGTGGATTACGATTT+TGG 0.087200 6:-72518979 None:intergenic
AGCAGGTGGGATATATTATT+TGG 0.184102 6:-72518866 None:intergenic
AAGAAGCTGGTGAGGGATTC+TGG 0.224369 6:-72522468 None:intergenic
CATCAGAAGATTCTGGTAAT+TGG 0.243250 6:-72522377 None:intergenic
AGACTTAACGTAGTCAAATT+TGG 0.255462 6:+72520289 MsG0680033744.01.T01:CDS
TGCACAAGGGTCCTGACTGC+TGG 0.272148 6:+72521614 MsG0680033744.01.T01:intron
CCAGCTTCTTTGCAAGGTGC+TGG 0.274078 6:+72522481 MsG0680033744.01.T01:CDS
AAGCAATAGTAATCACAATA+TGG 0.277217 6:+72522306 MsG0680033744.01.T01:CDS
TTTGAGCAACCTGAACTAAT+TGG 0.280593 6:-72521141 None:intergenic
TTTGCCTCATCAGAAGATTC+TGG 0.314520 6:-72522384 None:intergenic
CAGCTTCTTTGCAAGGTGCT+GGG 0.325798 6:+72522482 MsG0680033744.01.T01:CDS
AAGATTTGTTAGAACTTTGC+AGG 0.331751 6:+72521694 MsG0680033744.01.T01:CDS
CTATTGCTTATGTGATTGTT+TGG 0.343559 6:-72522292 None:intergenic
CGTGAAGTAAGATTTCCTTC+TGG 0.348949 6:+72520352 MsG0680033744.01.T01:CDS
AAATTTGACTACGTTAAGTC+TGG 0.354883 6:-72520287 None:intergenic
GTGAAGTAAGATTTCCTTCT+GGG 0.355713 6:+72520353 MsG0680033744.01.T01:CDS
GAAACTGCATTCGCTGAGCC+TGG 0.360815 6:-72519090 None:intergenic
AAATCTGGAAGAAGGGGATT+TGG 0.370643 6:+72520142 MsG0680033744.01.T01:CDS
GACATATGCGGAACTAAATC+TGG 0.370733 6:+72520127 MsG0680033744.01.T01:CDS
AAATCGTAATCCACAGTTAC+AGG 0.371291 6:+72518982 MsG0680033744.01.T01:CDS
GGCAATCGTGGTGCTTTGAC+CGG 0.380864 6:+72522328 MsG0680033744.01.T01:CDS
CACACACTCTTGAACTGCTT+TGG 0.381564 6:-72520395 None:intergenic
ACAGGTCAACCAATTAGTTC+AGG 0.385319 6:+72521132 MsG0680033744.01.T01:intron
GCGTCAGCTTGCGAAGAGTT+TGG 0.390189 6:+72521637 MsG0680033744.01.T01:CDS
GTCGCTGCTGTAGTGAGGGT+AGG 0.398217 6:-72522571 None:intergenic
GATGAGCCAGCTTGAGAAGC+AGG 0.407901 6:-72518770 None:intergenic
CAGGCACTTGTGCACCCGTT+TGG 0.413768 6:-72518799 None:intergenic
CACTTAATGAGCGCTGTTGA+AGG 0.436350 6:-72522622 None:intergenic
TCGCTGCTGTAGTGAGGGTA+GGG 0.437448 6:-72522570 None:intergenic
TTCACGGGTGCACAAGTGCC+TGG 0.440431 6:+72518827 MsG0680033744.01.T01:CDS
TGAAAGATTTGTTGCTGAGC+CGG 0.442598 6:-72519058 None:intergenic
ATTTGTTTCTTCAGCATGCT+TGG 0.442668 6:+72520098 MsG0680033744.01.T01:intron
CCGTATGATGGTGGTGGTGT+TGG 0.444125 6:+72519202 MsG0680033744.01.T01:CDS
GGCTCATCTTCGCACCAAAC+GGG 0.445319 6:+72518785 MsG0680033744.01.T01:CDS
AGGATAATAGTATTGCATAT+TGG 0.445753 6:+72519539 MsG0680033744.01.T01:intron
CCTTCTCGATGAAGTGAGCC+AGG 0.450422 6:-72522424 None:intergenic
TGGCTCATCTTCGCACCAAA+CGG 0.451424 6:+72518784 MsG0680033744.01.T01:CDS
CAAGCTGACGCCCAGCAGTC+AGG 0.451494 6:-72521625 None:intergenic
AGCAATAGTAATCACAATAT+GGG 0.454584 6:+72522307 MsG0680033744.01.T01:CDS
GAAAGATTTGTTGCTGAGCC+GGG 0.456474 6:-72519057 None:intergenic
CGGGCCATCACAAGCTGCTA+TGG 0.456754 6:+72522348 MsG0680033744.01.T01:CDS
CTTATGTGATTGTTTGGTCC+AGG 0.461142 6:-72522286 None:intergenic
AAGCTGATGGCATTGAATCC+TGG 0.461911 6:+72522268 MsG0680033744.01.T01:CDS
CGTATTTACTCAAGACCTAA+AGG 0.464821 6:+72520459 MsG0680033744.01.T01:CDS
TTTCTTGGGATTTCTGTGTA+AGG 0.470095 6:+72520572 MsG0680033744.01.T01:CDS
GCACAAGGGTCCTGACTGCT+GGG 0.470817 6:+72521615 MsG0680033744.01.T01:intron
CAAACGGGTGCACAAGTGCC+TGG 0.476595 6:+72518800 MsG0680033744.01.T01:CDS
AGCTTCTTTGCAAGGTGCTG+GGG 0.481337 6:+72522483 MsG0680033744.01.T01:CDS
TGCATATTGGAGAAAATTTG+TGG 0.481757 6:+72519552 MsG0680033744.01.T01:CDS
ACAAGTGCCTGGATCTTTCA+CGG 0.484466 6:+72518811 MsG0680033744.01.T01:CDS
CAAATGATGCAGCCCTCAGC+TGG 0.484505 6:+72519169 MsG0680033744.01.T01:CDS
AAAACTGACCGTAGTTGCCT+GGG 0.493407 6:-72519659 None:intergenic
GGTGAATTCTGCATAGAGCC+TGG 0.493626 6:-72522517 None:intergenic
CGGAACTAAATCTGGAAGAA+GGG 0.496413 6:+72520135 MsG0680033744.01.T01:CDS
GGATCTTGAGTGAAAGATCC+AGG 0.501934 6:-72518845 None:intergenic
GCGGAACTAAATCTGGAAGA+AGG 0.502603 6:+72520134 MsG0680033744.01.T01:CDS
GCAGAATCAACAGAAGCTGC+AGG 0.503705 6:+72518724 MsG0680033744.01.T01:CDS
CCCTCACCAGCTTCTTTGCA+AGG 0.504492 6:+72522475 MsG0680033744.01.T01:CDS
CAGAGTACAATTTCTGAAAG+TGG 0.504850 6:+72521169 MsG0680033744.01.T01:CDS
AAAGATGCAGGAGATGGAAC+AGG 0.505007 6:+72522201 MsG0680033744.01.T01:CDS
TTCGAGGAAGAAGTTCTTCG+TGG 0.507746 6:-72520597 None:intergenic
CCAGCACCTTGCAAAGAAGC+TGG 0.510142 6:-72522481 None:intergenic
TTTCTGAAAGTGGGTCAGAT+GGG 0.511298 6:+72521179 MsG0680033744.01.T01:CDS
TCTGGGTCACCTGCAATGGA+TGG 0.512455 6:+72518647 None:intergenic
AAACTGCATTCGCTGAGCCT+GGG 0.515879 6:-72519089 None:intergenic
TGTGCACCCGTGAAAGATCC+AGG 0.516894 6:-72518818 None:intergenic
GATCACAACGTTGGAGCACT+TGG 0.519657 6:+72521887 MsG0680033744.01.T01:CDS
TCGAAAGTTAGTTGCACCAC+AGG 0.521019 6:+72520615 MsG0680033744.01.T01:CDS
CTGCTGTCGCTGCTGTAGTG+AGG 0.521333 6:-72522576 None:intergenic
CATAGCAGCTTGTGATGGCC+CGG 0.526818 6:-72522347 None:intergenic
TTCTGGTTTGAGTTACTGAA+AGG 0.529945 6:-72522451 None:intergenic
ATTTCTGAAAGTGGGTCAGA+TGG 0.531570 6:+72521178 MsG0680033744.01.T01:CDS
TGTGGTGCAACTAACTTTCG+AGG 0.533250 6:-72520613 None:intergenic
AATCTTTCAGTCGTTGCCCC+CGG 0.533553 6:+72519039 MsG0680033744.01.T01:CDS
GCAATCGTGGTGCTTTGACC+GGG 0.534883 6:+72522329 MsG0680033744.01.T01:CDS
AACTCAATGAATTCAAGCCC+TGG 0.537180 6:+72522406 MsG0680033744.01.T01:CDS
AATGCAAAAGATGCAGGAGA+TGG 0.538660 6:+72522195 MsG0680033744.01.T01:CDS
TATGATGGTGGTGGTGTTGG+AGG 0.540568 6:+72519205 MsG0680033744.01.T01:CDS
GCTGGGGCTGCTATAATCCC+AGG 0.542056 6:+72522499 MsG0680033744.01.T01:CDS
GAGATGGAACAGGCAGCAAA+TGG 0.542386 6:+72522211 MsG0680033744.01.T01:CDS
TGCTGTCGCTGCTGTAGTGA+GGG 0.543007 6:-72522575 None:intergenic
AGCAACAACAGCAAATGCAG+AGG 0.545148 6:+72519131 MsG0680033744.01.T01:CDS
CGCTGCTGTAGTGAGGGTAG+GGG 0.547014 6:-72522569 None:intergenic
GGGGTAAAACACCAGCTGAA+TGG 0.548295 6:-72519639 None:intergenic
CACTTTCAGAAATTGTACTC+TGG 0.552295 6:-72521168 None:intergenic
AAAGATTTGTTGCTGAGCCG+GGG 0.553303 6:-72519056 None:intergenic
AGATGATATAATGCAACAGC+AGG 0.555604 6:+72518916 MsG0680033744.01.T01:CDS
GCTCCAAATGCAAAAGATGC+AGG 0.558369 6:+72522189 MsG0680033744.01.T01:CDS
GCTACAATCACTAAATGACT+TGG 0.559114 6:+72521661 MsG0680033744.01.T01:CDS
CTGGCTCACTTCATCGAGAA+GGG 0.559974 6:+72522425 MsG0680033744.01.T01:CDS
CTGGTTTGAGTTACTGAAAG+GGG 0.562385 6:-72522449 None:intergenic
AACGTTGGACACCATTCAGC+TGG 0.563736 6:+72519628 MsG0680033744.01.T01:CDS
AGAGTACAATTTCTGAAAGT+GGG 0.568485 6:+72521170 MsG0680033744.01.T01:CDS
CAGCTTCGTGTTGTTCGTGA+GGG 0.569042 6:+72520424 MsG0680033744.01.T01:CDS
CCTGGCTCACTTCATCGAGA+AGG 0.569293 6:+72522424 MsG0680033744.01.T01:CDS
AACGTAGTCAAATTTGGTGG+TGG 0.570431 6:+72520295 MsG0680033744.01.T01:CDS
TCTGGTTTGAGTTACTGAAA+GGG 0.570960 6:-72522450 None:intergenic
GGTGTGAAGCGTCCGTATGA+TGG 0.574656 6:+72519190 MsG0680033744.01.T01:CDS
CAAGTGCCTGGATCTTTCAC+GGG 0.575073 6:+72518812 MsG0680033744.01.T01:CDS
GTGAATTCTGCATAGAGCCT+GGG 0.577345 6:-72522516 None:intergenic
ACCTTGCAAAGAAGCTGGTG+AGG 0.579868 6:-72522476 None:intergenic
CCAACACCACCACCATCATA+CGG 0.581250 6:-72519202 None:intergenic
CTACAATCACTAAATGACTT+GGG 0.582087 6:+72521662 MsG0680033744.01.T01:CDS
GCAGCTTCGTGTTGTTCGTG+AGG 0.582229 6:+72520423 MsG0680033744.01.T01:CDS
CTTAACGTAGTCAAATTTGG+TGG 0.585857 6:+72520292 MsG0680033744.01.T01:CDS
AATTTGACTACGTTAAGTCT+GGG 0.586300 6:-72520286 None:intergenic
AAACACACTTAATAAGCTGA+TGG 0.587295 6:+72522255 MsG0680033744.01.T01:CDS
CACCATCGTTGCTTTGCACG+AGG 0.589596 6:-72519589 None:intergenic
GCTGCTGTAGTGAGGGTAGG+GGG 0.595276 6:-72522568 None:intergenic
CTCCTCGTGCAAAGCAACGA+TGG 0.595692 6:+72519587 MsG0680033744.01.T01:CDS
AACTGCATTCGCTGAGCCTG+GGG 0.596330 6:-72519088 None:intergenic
TTGCATTTGGAGCTTTGGGG+TGG 0.597799 6:-72522179 None:intergenic
AATCTTTCAGTCATTACCCC+AGG 0.598170 6:+72519072 MsG0680033744.01.T01:CDS
GGACGCTTCACACCAGCTGA+GGG 0.602363 6:-72519181 None:intergenic
CGGACGCTTCACACCAGCTG+AGG 0.603211 6:-72519182 None:intergenic
GGAACTAAATCTGGAAGAAG+GGG 0.603444 6:+72520136 MsG0680033744.01.T01:CDS
CCTTGCAAAGAAGCTGGTGA+GGG 0.606576 6:-72522475 None:intergenic
TTCTGAAAGTGGGTCAGATG+GGG 0.619067 6:+72521180 MsG0680033744.01.T01:CDS
GAACAGGCAGCAAATGGTCA+AGG 0.623367 6:+72522217 MsG0680033744.01.T01:CDS
ATTGCCATAGCAGCTTGTGA+TGG 0.623500 6:-72522352 None:intergenic
TCACCTCACAACAGTAGTGG+TGG 0.625883 6:+72522535 MsG0680033744.01.T01:CDS
AATCACAATATGGGCAATCG+TGG 0.626493 6:+72522316 MsG0680033744.01.T01:CDS
ATTACCAGAATCTTCTGATG+AGG 0.627608 6:+72522380 MsG0680033744.01.T01:CDS
AAGCGTCCGTATGATGGTGG+TGG 0.627811 6:+72519196 MsG0680033744.01.T01:CDS
GAGGGCTGCATCATTTGCTG+TGG 0.628092 6:-72519163 None:intergenic
TCTAACATCATCAACCCAGA+AGG 0.631328 6:-72520367 None:intergenic
CAGAATCAACAGAAGCTGCA+GGG 0.632025 6:+72518725 MsG0680033744.01.T01:CDS
AAGATTTGTTGCTGAGCCGG+GGG 0.632626 6:-72519055 None:intergenic
AGGCTATGTTTCAGCAACAG+AGG 0.635240 6:+72519002 MsG0680033744.01.T01:CDS
CTTCTCGATGAAGTGAGCCA+GGG 0.649483 6:-72522423 None:intergenic
TGAAACATAGCCTGTAACTG+TGG 0.653059 6:-72518992 None:intergenic
AATGAGCGCTGTTGAAGGTG+TGG 0.653128 6:-72522617 None:intergenic
AATTCACCTCACAACAGTAG+TGG 0.664907 6:+72522532 MsG0680033744.01.T01:CDS
GTGAAGCGTCCGTATGATGG+TGG 0.666690 6:+72519193 MsG0680033744.01.T01:CDS
AGAATTCTGCTGTACTACAG+AGG 0.673615 6:-72518672 None:intergenic
GAAGGAAATCTTACTTCACG+CGG 0.674498 6:-72520349 None:intergenic
TTAGCATTATATAGTAACGT+TGG 0.685696 6:+72519613 MsG0680033744.01.T01:CDS
AAACTGACCGTAGTTGCCTG+GGG 0.689698 6:-72519658 None:intergenic
AATCCACCACTACTGTTGTG+AGG 0.715466 6:-72522538 None:intergenic
AATCAACAGAAGCTGCAGGG+TGG 0.731716 6:+72518728 MsG0680033744.01.T01:CDS
GCTTGGCAGTGTGACATATG+CGG 0.756800 6:+72520115 MsG0680033744.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGAAAAGTTATAAAACTT+TGG + Chr6:72521391-72521410 MsG0680033744.01.T01:intron 15.0%
!! ATATAATTAATTGACTATGA+TGG - Chr6:72520838-72520857 None:intergenic 15.0%
!! ATCATAGTCAATTAATTATA+TGG + Chr6:72520837-72520856 MsG0680033744.01.T01:intron 15.0%
!! ATCATTATCTTCATAAATAT+TGG + Chr6:72521927-72521946 MsG0680033744.01.T01:intron 15.0%
!! GGATTTGATTAAATAAATTA+TGG - Chr6:72521786-72521805 None:intergenic 15.0%
!! TCTTTAATTCAAAGATTTAA+TGG + Chr6:72519751-72519770 MsG0680033744.01.T01:intron 15.0%
!!! AAAGTTTTATAACTTTTCTT+TGG - Chr6:72521392-72521411 None:intergenic 15.0%
!!! AAATTATGGAAAATGAATTT+TGG - Chr6:72521772-72521791 None:intergenic 15.0%
!!! AATTATATGGTTAAACTTTT+GGG + Chr6:72520850-72520869 MsG0680033744.01.T01:intron 15.0%
!!! ATAACATATTTTTAACGTTT+TGG + Chr6:72519454-72519473 MsG0680033744.01.T01:intron 15.0%
!!! GCTTTTTCAAAAAAAAAAAA+AGG - Chr6:72522079-72522098 None:intergenic 15.0%
!!! TAATTATATGGTTAAACTTT+TGG + Chr6:72520849-72520868 MsG0680033744.01.T01:intron 15.0%
!!! TAATTTTTACCTTTTTTTAC+AGG + Chr6:72521114-72521133 MsG0680033744.01.T01:intron 15.0%
!! AAAAAAAAAAAAAGGAACAG+AGG - Chr6:72522071-72522090 None:intergenic 20.0%
!! AATCCTATAATTTATGAGTT+TGG - Chr6:72519999-72520018 None:intergenic 20.0%
!! ACAGTAAATATAGTTAGATA+TGG - Chr6:72520498-72520517 None:intergenic 20.0%
!! CAAATAAAAAAACTGACATT+TGG - Chr6:72519280-72519299 None:intergenic 20.0%
!! CTGTAAAAAACAGTAAAAAA+TGG - Chr6:72521421-72521440 None:intergenic 20.0%
!!! GTATGATTCATTTTATTTAG+TGG + Chr6:72519912-72519931 MsG0680033744.01.T01:intron 20.0%
! AAAAGAAACTCCATCATTTA+GGG - Chr6:72520980-72520999 None:intergenic 25.0%
! AAGCAATAGTAATCACAATA+TGG + Chr6:72522306-72522325 MsG0680033744.01.T01:CDS 25.0%
! AAGCCAAACTCATAAATTAT+AGG + Chr6:72519993-72520012 MsG0680033744.01.T01:intron 25.0%
! AGCAATAGTAATCACAATAT+GGG + Chr6:72522307-72522326 MsG0680033744.01.T01:CDS 25.0%
! AGGATAATAGTATTGCATAT+TGG + Chr6:72519539-72519558 MsG0680033744.01.T01:intron 25.0%
! ATCTGTAAAAACATAACAGA+AGG - Chr6:72521821-72521840 None:intergenic 25.0%
! CATAAACTAAAGAAATCATG+TGG - Chr6:72519321-72519340 None:intergenic 25.0%
! CTATTCATGGAATAACATAA+AGG - Chr6:72519702-72519721 None:intergenic 25.0%
! CTTTATGTTATTCCATGAAT+AGG + Chr6:72519700-72519719 MsG0680033744.01.T01:intron 25.0%
! TATAACATTATCGCACAAAA+GGG - Chr6:72520215-72520234 None:intergenic 25.0%
! TATATTTCATAGTTTCTGCA+GGG + Chr6:72521730-72521749 MsG0680033744.01.T01:intron 25.0%
! TGTTATCATCATGTAATTGT+AGG + Chr6:72519783-72519802 MsG0680033744.01.T01:intron 25.0%
! TTAATTGACTATGATGGTAA+TGG - Chr6:72520832-72520851 None:intergenic 25.0%
! TTAGCATTATATAGTAACGT+TGG + Chr6:72519613-72519632 MsG0680033744.01.T01:CDS 25.0%
! TTATACATGGTCAACTAATA+AGG + Chr6:72521481-72521500 MsG0680033744.01.T01:intron 25.0%
! TTATACTAATATCTGCATTC+TGG + Chr6:72520230-72520249 MsG0680033744.01.T01:intron 25.0%
! TTATATTTCATAGTTTCTGC+AGG + Chr6:72521729-72521748 MsG0680033744.01.T01:intron 25.0%
!! AATGTGTTTGAAGTTATACA+TGG + Chr6:72521468-72521487 MsG0680033744.01.T01:intron 25.0%
!! ATAATGTTTCTTTTGCACAA+GGG + Chr6:72521601-72521620 MsG0680033744.01.T01:intron 25.0%
!! ATTTGCTCAGATATTTTCTT+GGG + Chr6:72520558-72520577 MsG0680033744.01.T01:intron 25.0%
!! CAAATTATCAAGATTTTCAG+TGG - Chr6:72520543-72520562 None:intergenic 25.0%
!! CACATGATTTCTTTAGTTTA+TGG + Chr6:72519319-72519338 MsG0680033744.01.T01:intron 25.0%
!! CTTCTTTTAACATCTAGATT+AGG + Chr6:72519480-72519499 MsG0680033744.01.T01:intron 25.0%
!!! AATTTGCTCAGATATTTTCT+TGG + Chr6:72520557-72520576 MsG0680033744.01.T01:intron 25.0%
!!! AGTTTCTTTTGAAAATCTTG+GGG + Chr6:72520990-72521009 MsG0680033744.01.T01:intron 25.0%
!!! ATAGTGTAGAGGTATTATTT+TGG + Chr6:72521078-72521097 MsG0680033744.01.T01:intron 25.0%
!!! ATGTTTTGAACAATCAAGAA+TGG - Chr6:72520804-72520823 None:intergenic 25.0%
!!! GAGTTTCTTTTGAAAATCTT+GGG + Chr6:72520989-72521008 MsG0680033744.01.T01:intron 25.0%
!!! TTATTAAGTGTGTTTTGATC+AGG - Chr6:72522250-72522269 None:intergenic 25.0%
AAACACACTTAATAAGCTGA+TGG + Chr6:72522255-72522274 MsG0680033744.01.T01:CDS 30.0%
AAACATCCCCAAATCATAAA+AGG - Chr6:72519353-72519372 None:intergenic 30.0%
AAAGAAACTCCATCATTTAG+GGG - Chr6:72520979-72520998 None:intergenic 30.0%
AAAGTTCTATCCACTTTAAC+TGG + Chr6:72520927-72520946 MsG0680033744.01.T01:intron 30.0%
AAATTTGACTACGTTAAGTC+TGG - Chr6:72520290-72520309 None:intergenic 30.0%
AATTTGACTACGTTAAGTCT+GGG - Chr6:72520289-72520308 None:intergenic 30.0%
ACAAATGGACAATAACTAGA+TGG - Chr6:72519864-72519883 None:intergenic 30.0%
AGACTTAACGTAGTCAAATT+TGG + Chr6:72520289-72520308 MsG0680033744.01.T01:CDS 30.0%
AGTATTAATCTCTACAAACC+TGG - Chr6:72521555-72521574 None:intergenic 30.0%
ATGGTCAACTAATAAGGATA+GGG + Chr6:72521487-72521506 MsG0680033744.01.T01:intron 30.0%
ATTAATAAACACAGGAACAG+AGG - Chr6:72522109-72522128 None:intergenic 30.0%
ATTGGTTGACCTGTAAAAAA+AGG - Chr6:72521126-72521145 None:intergenic 30.0%
CAAAAGAAACTCCATCATTT+AGG - Chr6:72520981-72521000 None:intergenic 30.0%
CTACAATCACTAAATGACTT+GGG + Chr6:72521662-72521681 MsG0680033744.01.T01:CDS 30.0%
CTATTGCTTATGTGATTGTT+TGG - Chr6:72522295-72522314 None:intergenic 30.0%
GTAGTAGGATTAATAAACAC+AGG - Chr6:72522117-72522136 None:intergenic 30.0%
GTATAACATTATCGCACAAA+AGG - Chr6:72520216-72520235 None:intergenic 30.0%
GTTCTATCTCTCTCATAAAT+GGG + Chr6:72519956-72519975 MsG0680033744.01.T01:intron 30.0%
TCTCATAAATGGGGAATAAA+TGG + Chr6:72519966-72519985 MsG0680033744.01.T01:intron 30.0%
TGCATATTGGAGAAAATTTG+TGG + Chr6:72519552-72519571 MsG0680033744.01.T01:CDS 30.0%
TGCTGAAGAAACAAATATCA+AGG - Chr6:72520094-72520113 None:intergenic 30.0%
TGTTCTATCTCTCTCATAAA+TGG + Chr6:72519955-72519974 MsG0680033744.01.T01:intron 30.0%
TTCTATCTCTCTCATAAATG+GGG + Chr6:72519957-72519976 MsG0680033744.01.T01:intron 30.0%
! AGAACAAGTGATAGCTTTTA+TGG - Chr6:72519941-72519960 None:intergenic 30.0%
! AGAGTACAATTTCTGAAAGT+GGG + Chr6:72521170-72521189 MsG0680033744.01.T01:CDS 30.0%
! AGCAACAACCTTTTATGATT+TGG + Chr6:72519342-72519361 MsG0680033744.01.T01:intron 30.0%
! CAACAACCTTTTATGATTTG+GGG + Chr6:72519344-72519363 MsG0680033744.01.T01:intron 30.0%
! GAACAAGTGATAGCTTTTAT+GGG - Chr6:72519940-72519959 None:intergenic 30.0%
! GATAATGTTTCTTTTGCACA+AGG + Chr6:72521600-72521619 MsG0680033744.01.T01:intron 30.0%
! GCAACAACCTTTTATGATTT+GGG + Chr6:72519343-72519362 MsG0680033744.01.T01:intron 30.0%
! TTTTGTCGCTGATAACTTTA+TGG + Chr6:72521035-72521054 MsG0680033744.01.T01:intron 30.0%
! TTTTGTTGATCTGTTTTCTC+AGG + Chr6:72519519-72519538 MsG0680033744.01.T01:intron 30.0%
!! AAGATTTGTTAGAACTTTGC+AGG + Chr6:72521694-72521713 MsG0680033744.01.T01:CDS 30.0%
!! AGAAGTACCATGACAATAAA+AGG - Chr6:72520045-72520064 None:intergenic 30.0%
!! GGAGTTTCTTTTGAAAATCT+TGG + Chr6:72520988-72521007 MsG0680033744.01.T01:intron 30.0%
!! TAATTTTTCAAACTCTCTGC+AGG - Chr6:72522145-72522164 None:intergenic 30.0%
!!! AGAGGTATTATTTTGGAATG+TGG + Chr6:72521085-72521104 MsG0680033744.01.T01:intron 30.0%
!!! ATAATTTGTTTTCTTGAGCC+AGG + Chr6:72521534-72521553 MsG0680033744.01.T01:intron 30.0%
!!! ATATGTTTTGATCACAACGT+TGG + Chr6:72521878-72521897 MsG0680033744.01.T01:CDS 30.0%
!!! ATTACGATTTTGGAATTGTG+TGG - Chr6:72518972-72518991 None:intergenic 30.0%
!!! GATCGATGAACTTTTGTTTT+TGG + Chr6:72520321-72520340 MsG0680033744.01.T01:CDS 30.0%
!!! GTATAATGCTTCCTGTTTTT+TGG + Chr6:72521346-72521365 MsG0680033744.01.T01:intron 30.0%
!!! TTACGATTTTGGAATTGTGT+GGG - Chr6:72518971-72518990 None:intergenic 30.0%
AAAAAAGGAACAGAGGCTAA+TGG - Chr6:72522064-72522083 None:intergenic 35.0%
AAATCGTAATCCACAGTTAC+AGG + Chr6:72518982-72519001 MsG0680033744.01.T01:CDS 35.0%
AACAGAAGGCAGAGAAAAAA+AGG - Chr6:72521807-72521826 None:intergenic 35.0%
AAGAAACTCCATCATTTAGG+GGG - Chr6:72520978-72520997 None:intergenic 35.0%
AATTTACAGCTCTTGTCTAG+AGG - Chr6:72519824-72519843 None:intergenic 35.0%
ACTAAAGAAATCATGTGGAC+AGG - Chr6:72519316-72519335 None:intergenic 35.0%
AGATGATATAATGCAACAGC+AGG + Chr6:72518916-72518935 MsG0680033744.01.T01:CDS 35.0%
AGCAGGTGGGATATATTATT+TGG - Chr6:72518869-72518888 None:intergenic 35.0%
ATACCTCTACACTATCATTC+AGG - Chr6:72521073-72521092 None:intergenic 35.0%
ATCAAGAGATAGTGAATCTG+AGG - Chr6:72521294-72521313 None:intergenic 35.0%
ATTACCAGAATCTTCTGATG+AGG + Chr6:72522380-72522399 MsG0680033744.01.T01:CDS 35.0%
CAACTCAATTGCCAAAAAAC+AGG - Chr6:72521360-72521379 None:intergenic 35.0%
CACTTTCAGAAATTGTACTC+TGG - Chr6:72521171-72521190 None:intergenic 35.0%
CAGTTCTTGAAATTTCCCAA+AGG + Chr6:72520900-72520919 MsG0680033744.01.T01:intron 35.0%
CATCAGAAGATTCTGGTAAT+TGG - Chr6:72522380-72522399 None:intergenic 35.0%
CATCTAGATTAGGTACAACA+CGG + Chr6:72519490-72519509 MsG0680033744.01.T01:intron 35.0%
CATGGTCAACTAATAAGGAT+AGG + Chr6:72521486-72521505 MsG0680033744.01.T01:intron 35.0%
CGTATTTACTCAAGACCTAA+AGG + Chr6:72520459-72520478 MsG0680033744.01.T01:CDS 35.0%
CTTAACGTAGTCAAATTTGG+TGG + Chr6:72520292-72520311 MsG0680033744.01.T01:CDS 35.0%
GAATCTTGTAGTGTAGCTAA+AGG - Chr6:72520766-72520785 None:intergenic 35.0%
GATAGAACTTTCACACCTTT+GGG - Chr6:72520918-72520937 None:intergenic 35.0%
GCTACAATCACTAAATGACT+TGG + Chr6:72521661-72521680 MsG0680033744.01.T01:CDS 35.0%
GGTACTTCTGATTCTTTGAA+GGG + Chr6:72520056-72520075 MsG0680033744.01.T01:intron 35.0%
GGTGAAGATCTATAACCTTT+AGG - Chr6:72520477-72520496 None:intergenic 35.0%
GTGAAGTAAGATTTCCTTCT+GGG + Chr6:72520353-72520372 MsG0680033744.01.T01:CDS 35.0%
TACCATGACAATAAAAGGCA+AGG - Chr6:72520040-72520059 None:intergenic 35.0%
TGGTACTTCTGATTCTTTGA+AGG + Chr6:72520055-72520074 MsG0680033744.01.T01:intron 35.0%
TGGTCAACTAATAAGGATAG+GGG + Chr6:72521488-72521507 MsG0680033744.01.T01:intron 35.0%
TTGCAGTATCATCCTATTCA+TGG - Chr6:72519715-72519734 None:intergenic 35.0%
TTTCTTGGGATTTCTGTGTA+AGG + Chr6:72520572-72520591 MsG0680033744.01.T01:CDS 35.0%
TTTGAGCAACCTGAACTAAT+TGG - Chr6:72521144-72521163 None:intergenic 35.0%
! AATCCTGAATGATAGTGTAG+AGG + Chr6:72521067-72521086 MsG0680033744.01.T01:intron 35.0%
! ATTCTGGATTTGCTTAACAG+AGG + Chr6:72520246-72520265 MsG0680033744.01.T01:intron 35.0%
! ATTTGTTTCTTCAGCATGCT+TGG + Chr6:72520098-72520117 MsG0680033744.01.T01:intron 35.0%
! CAGAGTACAATTTCTGAAAG+TGG + Chr6:72521169-72521188 MsG0680033744.01.T01:CDS 35.0%
! TCTGGTTTGAGTTACTGAAA+GGG - Chr6:72522453-72522472 None:intergenic 35.0%
! TTCCTTGCCTTTTATTGTCA+TGG + Chr6:72520035-72520054 MsG0680033744.01.T01:intron 35.0%
!! ATCTTTTGCATTTGGAGCTT+TGG - Chr6:72522187-72522206 None:intergenic 35.0%
!! GTAACATGTAAGTTGATGCA+TGG + Chr6:72521231-72521250 MsG0680033744.01.T01:intron 35.0%
!! GTAACTGTGGATTACGATTT+TGG - Chr6:72518982-72519001 None:intergenic 35.0%
!! TCTTTTGCATTTGGAGCTTT+GGG - Chr6:72522186-72522205 None:intergenic 35.0%
!! TTCTGGTTTGAGTTACTGAA+AGG - Chr6:72522454-72522473 None:intergenic 35.0%
!! TTTGGTTCTTCCAGTTAAAG+TGG - Chr6:72520940-72520959 None:intergenic 35.0%
!!! CTGTTTTTTGGCAATTGAGT+TGG + Chr6:72521358-72521377 MsG0680033744.01.T01:intron 35.0%
!!! TAAGTGTGTTTTGATCAGGT+GGG - Chr6:72522246-72522265 None:intergenic 35.0%
!!! TACGATTTTGGAATTGTGTG+GGG - Chr6:72518970-72518989 None:intergenic 35.0%
!!! TTAAGTGTGTTTTGATCAGG+TGG - Chr6:72522247-72522266 None:intergenic 35.0%
AAATCTGGAAGAAGGGGATT+TGG + Chr6:72520142-72520161 MsG0680033744.01.T01:CDS 40.0%
AACTCAATGAATTCAAGCCC+TGG + Chr6:72522406-72522425 MsG0680033744.01.T01:CDS 40.0%
AATCACAATATGGGCAATCG+TGG + Chr6:72522316-72522335 MsG0680033744.01.T01:CDS 40.0%
AATCTTTCAGTCATTACCCC+AGG + Chr6:72519072-72519091 MsG0680033744.01.T01:CDS 40.0%
AATGCAAAAGATGCAGGAGA+TGG + Chr6:72522195-72522214 MsG0680033744.01.T01:CDS 40.0%
AATTCACCTCACAACAGTAG+TGG + Chr6:72522532-72522551 MsG0680033744.01.T01:CDS 40.0%
ACAGGTCAACCAATTAGTTC+AGG + Chr6:72521132-72521151 MsG0680033744.01.T01:intron 40.0%
AGAATTCTGCTGTACTACAG+AGG - Chr6:72518675-72518694 None:intergenic 40.0%
AGATAGTGAATCTGAGGAAG+AGG - Chr6:72521288-72521307 None:intergenic 40.0%
CAGCTGTGTTCAAATTACAC+AGG + Chr6:72521952-72521971 MsG0680033744.01.T01:intron 40.0%
CGGAACTAAATCTGGAAGAA+GGG + Chr6:72520135-72520154 MsG0680033744.01.T01:CDS 40.0%
CGTGAAGTAAGATTTCCTTC+TGG + Chr6:72520352-72520371 MsG0680033744.01.T01:CDS 40.0%
CTTAGATCCAACATAGCATG+CGG - Chr6:72520650-72520669 None:intergenic 40.0%
CTTATGTGATTGTTTGGTCC+AGG - Chr6:72522289-72522308 None:intergenic 40.0%
GAAGGAAATCTTACTTCACG+CGG - Chr6:72520352-72520371 None:intergenic 40.0%
GACATATGCGGAACTAAATC+TGG + Chr6:72520127-72520146 MsG0680033744.01.T01:CDS 40.0%
GGAACTAAATCTGGAAGAAG+GGG + Chr6:72520136-72520155 MsG0680033744.01.T01:CDS 40.0%
GGATAGAACTTTCACACCTT+TGG - Chr6:72520919-72520938 None:intergenic 40.0%
TATGATTCCGCATGCTATGT+TGG + Chr6:72520640-72520659 MsG0680033744.01.T01:intron 40.0%
TCTAACATCATCAACCCAGA+AGG - Chr6:72520370-72520389 None:intergenic 40.0%
TGAAACATAGCCTGTAACTG+TGG - Chr6:72518995-72519014 None:intergenic 40.0%
TTGTCCATTTGTGAGAGAGA+TGG + Chr6:72519872-72519891 MsG0680033744.01.T01:intron 40.0%
TTTGCCTCATCAGAAGATTC+TGG - Chr6:72522387-72522406 None:intergenic 40.0%
! AACGTAGTCAAATTTGGTGG+TGG + Chr6:72520295-72520314 MsG0680033744.01.T01:CDS 40.0%
! ATTTCTGAAAGTGGGTCAGA+TGG + Chr6:72521178-72521197 MsG0680033744.01.T01:CDS 40.0%
! CTGGTTTGAGTTACTGAAAG+GGG - Chr6:72522452-72522471 None:intergenic 40.0%
! TCTCCTGCATCTTTTGCATT+TGG - Chr6:72522195-72522214 None:intergenic 40.0%
! TTTCTGAAAGTGGGTCAGAT+GGG + Chr6:72521179-72521198 MsG0680033744.01.T01:CDS 40.0%
!! CTTTTGCATTTGGAGCTTTG+GGG - Chr6:72522185-72522204 None:intergenic 40.0%
!! TGAAAGATTTGTTGCTGAGC+CGG - Chr6:72519061-72519080 None:intergenic 40.0%
!!! AAGTGTGTTTTGATCAGGTG+GGG - Chr6:72522245-72522264 None:intergenic 40.0%
AAAAACTGACCGTAGTTGCC+TGG - Chr6:72519663-72519682 None:intergenic 45.0%
AAAACTGACCGTAGTTGCCT+GGG - Chr6:72519662-72519681 None:intergenic 45.0%
AAAGACGACAGGTTACTCAG+TGG - Chr6:72521016-72521035 None:intergenic 45.0%
AAAGATGCAGGAGATGGAAC+AGG + Chr6:72522201-72522220 MsG0680033744.01.T01:CDS 45.0%
AATCCACCACTACTGTTGTG+AGG - Chr6:72522541-72522560 None:intergenic 45.0%
ACAAGTGCCTGGATCTTTCA+CGG + Chr6:72518811-72518830 MsG0680033744.01.T01:CDS 45.0%
AGCAACAACAGCAAATGCAG+AGG + Chr6:72519131-72519150 MsG0680033744.01.T01:CDS 45.0%
AGGCTATGTTTCAGCAACAG+AGG + Chr6:72519002-72519021 MsG0680033744.01.T01:CDS 45.0%
ATTGCCATAGCAGCTTGTGA+TGG - Chr6:72522355-72522374 None:intergenic 45.0%
CACACACTCTTGAACTGCTT+TGG - Chr6:72520398-72520417 None:intergenic 45.0%
CAGAATCAACAGAAGCTGCA+GGG + Chr6:72518725-72518744 MsG0680033744.01.T01:CDS 45.0%
CATGCGGAATCATATACCTG+TGG - Chr6:72520634-72520653 None:intergenic 45.0%
GCACAAAGACACACAGAATG+TGG - Chr6:72520718-72520737 None:intergenic 45.0%
GCGGAACTAAATCTGGAAGA+AGG + Chr6:72520134-72520153 MsG0680033744.01.T01:CDS 45.0%
GCTCCAAATGCAAAAGATGC+AGG + Chr6:72522189-72522208 MsG0680033744.01.T01:CDS 45.0%
GGATCTTGAGTGAAAGATCC+AGG - Chr6:72518848-72518867 None:intergenic 45.0%
GTGAATTCTGCATAGAGCCT+GGG - Chr6:72522519-72522538 None:intergenic 45.0%
GTGTCCATCTCTCTCACAAA+TGG - Chr6:72519879-72519898 None:intergenic 45.0%
TCAGCGACAAAAAAGACGAC+AGG - Chr6:72521027-72521046 None:intergenic 45.0%
TCGAAAGTTAGTTGCACCAC+AGG + Chr6:72520615-72520634 MsG0680033744.01.T01:CDS 45.0%
TCTCTGCAGGCAAATGTAGT+AGG - Chr6:72522132-72522151 None:intergenic 45.0%
TGTGGTGCAACTAACTTTCG+AGG - Chr6:72520616-72520635 None:intergenic 45.0%
TTCGAGGAAGAAGTTCTTCG+TGG - Chr6:72520600-72520619 None:intergenic 45.0%
! AAGCTGATGGCATTGAATCC+TGG + Chr6:72522268-72522287 MsG0680033744.01.T01:CDS 45.0%
! CACTTAATGAGCGCTGTTGA+AGG - Chr6:72522625-72522644 None:intergenic 45.0%
! GTCGCTGTCTTTGATGATAG+AGG - Chr6:72519258-72519277 None:intergenic 45.0%
! TGGAAGAAGGGGATTTGGTA+TGG + Chr6:72520147-72520166 MsG0680033744.01.T01:intron 45.0%
! TGTTTTACCCCAGGCAACTA+CGG + Chr6:72519651-72519670 MsG0680033744.01.T01:CDS 45.0%
! TTCTGAAAGTGGGTCAGATG+GGG + Chr6:72521180-72521199 MsG0680033744.01.T01:CDS 45.0%
!! AAAGATTTGTTGCTGAGCCG+GGG - Chr6:72519059-72519078 None:intergenic 45.0%
!! AGAGGTACTGCATCAATCGA+CGG - Chr6:72519240-72519259 None:intergenic 45.0%
!! GAAAGATTTGTTGCTGAGCC+GGG - Chr6:72519060-72519079 None:intergenic 45.0%
!!! AGTGTGTTTTGATCAGGTGG+GGG - Chr6:72522244-72522263 None:intergenic 45.0%
!!! CCTACGTTTTTTCAGCAGGT+GGG - Chr6:72518882-72518901 None:intergenic 45.0%
AAACTGACCGTAGTTGCCTG+GGG - Chr6:72519661-72519680 None:intergenic 50.0%
AAACTGCATTCGCTGAGCCT+GGG - Chr6:72519092-72519111 None:intergenic 50.0%
AACGTTGGACACCATTCAGC+TGG + Chr6:72519628-72519647 MsG0680033744.01.T01:CDS 50.0%
AAGAAGCTGGTGAGGGATTC+TGG - Chr6:72522471-72522490 None:intergenic 50.0%
AATCAACAGAAGCTGCAGGG+TGG + Chr6:72518728-72518747 MsG0680033744.01.T01:CDS 50.0%
AATCTTTCAGTCGTTGCCCC+CGG + Chr6:72519039-72519058 MsG0680033744.01.T01:CDS 50.0%
ACCTTGCAAAGAAGCTGGTG+AGG - Chr6:72522479-72522498 None:intergenic 50.0%
CAAGTGCCTGGATCTTTCAC+GGG + Chr6:72518812-72518831 MsG0680033744.01.T01:CDS 50.0%
CCAACACCACCACCATCATA+CGG - Chr6:72519205-72519224 None:intergenic 50.0%
CCCACCTGCTGAAAAAACGT+AGG + Chr6:72518879-72518898 MsG0680033744.01.T01:CDS 50.0%
CCTGCTGAAAAAACGTAGGC+TGG + Chr6:72518883-72518902 MsG0680033744.01.T01:CDS 50.0%
CCTTGCAAAGAAGCTGGTGA+GGG - Chr6:72522478-72522497 None:intergenic 50.0%
CTGGCTCACTTCATCGAGAA+GGG + Chr6:72522425-72522444 MsG0680033744.01.T01:CDS 50.0%
CTTCTCGATGAAGTGAGCCA+GGG - Chr6:72522426-72522445 None:intergenic 50.0%
GAACAGGCAGCAAATGGTCA+AGG + Chr6:72522217-72522236 MsG0680033744.01.T01:CDS 50.0%
GAGATGGAACAGGCAGCAAA+TGG + Chr6:72522211-72522230 MsG0680033744.01.T01:CDS 50.0%
GATTCGTGCCCCCTAAATGA+TGG + Chr6:72520967-72520986 MsG0680033744.01.T01:intron 50.0%
GCAGAATCAACAGAAGCTGC+AGG + Chr6:72518724-72518743 MsG0680033744.01.T01:CDS 50.0%
GCTTGGCAGTGTGACATATG+CGG + Chr6:72520115-72520134 MsG0680033744.01.T01:CDS 50.0%
GGGCACGAATCTGGTACATT+TGG - Chr6:72520958-72520977 None:intergenic 50.0%
GGGGTAAAACACCAGCTGAA+TGG - Chr6:72519642-72519661 None:intergenic 50.0%
GGTGAATTCTGCATAGAGCC+TGG - Chr6:72522520-72522539 None:intergenic 50.0%
TCACCTCACAACAGTAGTGG+TGG + Chr6:72522535-72522554 MsG0680033744.01.T01:CDS 50.0%
TGGCTCATCTTCGCACCAAA+CGG + Chr6:72518784-72518803 MsG0680033744.01.T01:CDS 50.0%
! AATGAGCGCTGTTGAAGGTG+TGG - Chr6:72522620-72522639 None:intergenic 50.0%
! CAGCTTCGTGTTGTTCGTGA+GGG + Chr6:72520424-72520443 MsG0680033744.01.T01:CDS 50.0%
! CAGCTTCTTTGCAAGGTGCT+GGG + Chr6:72522482-72522501 MsG0680033744.01.T01:CDS 50.0%
! CTTTTGCCTGCTTCTCAAGC+TGG + Chr6:72518764-72518783 MsG0680033744.01.T01:CDS 50.0%
! GATCACAACGTTGGAGCACT+TGG + Chr6:72521887-72521906 MsG0680033744.01.T01:CDS 50.0%
! TCATTTAGGGGGCACGAATC+TGG - Chr6:72520967-72520986 None:intergenic 50.0%
! TTCAGCTGGTGTTTTACCCC+AGG + Chr6:72519642-72519661 MsG0680033744.01.T01:CDS 50.0%
!! AAGATTTGTTGCTGAGCCGG+GGG - Chr6:72519058-72519077 None:intergenic 50.0%
!! AGCTTCTTTGCAAGGTGCTG+GGG + Chr6:72522483-72522502 MsG0680033744.01.T01:CDS 50.0%
!! GAGGTACTGCATCAATCGAC+GGG - Chr6:72519239-72519258 None:intergenic 50.0%
!! TATGATGGTGGTGGTGTTGG+AGG + Chr6:72519205-72519224 MsG0680033744.01.T01:CDS 50.0%
!! TTGCATTTGGAGCTTTGGGG+TGG - Chr6:72522182-72522201 None:intergenic 50.0%
!!! CCAGCCTACGTTTTTTCAGC+AGG - Chr6:72518886-72518905 None:intergenic 50.0%
!!! GCCTACGTTTTTTCAGCAGG+TGG - Chr6:72518883-72518902 None:intergenic 50.0%
AACTGCATTCGCTGAGCCTG+GGG - Chr6:72519091-72519110 None:intergenic 55.0%
CAAATGATGCAGCCCTCAGC+TGG + Chr6:72519169-72519188 MsG0680033744.01.T01:CDS 55.0%
CATAGCAGCTTGTGATGGCC+CGG - Chr6:72522350-72522369 None:intergenic 55.0%
CCAGCACCTTGCAAAGAAGC+TGG - Chr6:72522484-72522503 None:intergenic 55.0%
CCAGCTTCTTTGCAAGGTGC+TGG + Chr6:72522481-72522500 MsG0680033744.01.T01:CDS 55.0%
CCCTCACCAGCTTCTTTGCA+AGG + Chr6:72522475-72522494 MsG0680033744.01.T01:CDS 55.0%
CCTGGCTCACTTCATCGAGA+AGG + Chr6:72522424-72522443 MsG0680033744.01.T01:CDS 55.0%
CCTTCTCGATGAAGTGAGCC+AGG - Chr6:72522427-72522446 None:intergenic 55.0%
CTCCTCGTGCAAAGCAACGA+TGG + Chr6:72519587-72519606 MsG0680033744.01.T01:CDS 55.0%
GAAACTGCATTCGCTGAGCC+TGG - Chr6:72519093-72519112 None:intergenic 55.0%
GATGAGCCAGCTTGAGAAGC+AGG - Chr6:72518773-72518792 None:intergenic 55.0%
GCAATCGTGGTGCTTTGACC+GGG + Chr6:72522329-72522348 MsG0680033744.01.T01:CDS 55.0%
GCGTCAGCTTGCGAAGAGTT+TGG + Chr6:72521637-72521656 MsG0680033744.01.T01:CDS 55.0%
GGCAATCGTGGTGCTTTGAC+CGG + Chr6:72522328-72522347 MsG0680033744.01.T01:CDS 55.0%
GGCTCATCTTCGCACCAAAC+GGG + Chr6:72518785-72518804 MsG0680033744.01.T01:CDS 55.0%
TCGCTGCTGTAGTGAGGGTA+GGG - Chr6:72522573-72522592 None:intergenic 55.0%
TGCTGTCGCTGCTGTAGTGA+GGG - Chr6:72522578-72522597 None:intergenic 55.0%
TGTGCACCCGTGAAAGATCC+AGG - Chr6:72518821-72518840 None:intergenic 55.0%
! CACCATCGTTGCTTTGCACG+AGG - Chr6:72519592-72519611 None:intergenic 55.0%
! GAGGGCTGCATCATTTGCTG+TGG - Chr6:72519166-72519185 None:intergenic 55.0%
! GCAGCTTCGTGTTGTTCGTG+AGG + Chr6:72520423-72520442 MsG0680033744.01.T01:CDS 55.0%
! GGTGTGAAGCGTCCGTATGA+TGG + Chr6:72519190-72519209 MsG0680033744.01.T01:CDS 55.0%
! GTGAAGCGTCCGTATGATGG+TGG + Chr6:72519193-72519212 MsG0680033744.01.T01:CDS 55.0%
!! AAGCGTCCGTATGATGGTGG+TGG + Chr6:72519196-72519215 MsG0680033744.01.T01:CDS 55.0%
!! CCGTATGATGGTGGTGGTGT+TGG + Chr6:72519202-72519221 MsG0680033744.01.T01:CDS 55.0%
CAAACGGGTGCACAAGTGCC+TGG + Chr6:72518800-72518819 MsG0680033744.01.T01:CDS 60.0%
CAGGCACTTGTGCACCCGTT+TGG - Chr6:72518802-72518821 None:intergenic 60.0%
CGCTGCTGTAGTGAGGGTAG+GGG - Chr6:72522572-72522591 None:intergenic 60.0%
CGGGCCATCACAAGCTGCTA+TGG + Chr6:72522348-72522367 MsG0680033744.01.T01:CDS 60.0%
CTGCTGTCGCTGCTGTAGTG+AGG - Chr6:72522579-72522598 None:intergenic 60.0%
GCACAAGGGTCCTGACTGCT+GGG + Chr6:72521615-72521634 MsG0680033744.01.T01:intron 60.0%
GCTGCTGTAGTGAGGGTAGG+GGG - Chr6:72522571-72522590 None:intergenic 60.0%
GCTGGGGCTGCTATAATCCC+AGG + Chr6:72522499-72522518 MsG0680033744.01.T01:CDS 60.0%
GGACGCTTCACACCAGCTGA+GGG - Chr6:72519184-72519203 None:intergenic 60.0%
GTCGCTGCTGTAGTGAGGGT+AGG - Chr6:72522574-72522593 None:intergenic 60.0%
TGCACAAGGGTCCTGACTGC+TGG + Chr6:72521614-72521633 MsG0680033744.01.T01:intron 60.0%
TTCACGGGTGCACAAGTGCC+TGG + Chr6:72518827-72518846 MsG0680033744.01.T01:CDS 60.0%
CAAGCTGACGCCCAGCAGTC+AGG - Chr6:72521628-72521647 None:intergenic 65.0%
CGGACGCTTCACACCAGCTG+AGG - Chr6:72519185-72519204 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr6 gene 72518662 72522651 72518662 ID=MsG0680033744.01;Name=MsG0680033744.01
Chr6 mRNA 72518662 72522651 72518662 ID=MsG0680033744.01.T01;Parent=MsG0680033744.01;Name=MsG0680033744.01.T01;_AED=0.31;_eAED=0.31;_QI=0|0.75|0.77|1|1|1|9|0|598
Chr6 exon 72522149 72522651 72522149 ID=MsG0680033744.01.T01:exon:4111;Parent=MsG0680033744.01.T01
Chr6 exon 72521839 72521908 72521839 ID=MsG0680033744.01.T01:exon:4110;Parent=MsG0680033744.01.T01
Chr6 exon 72521622 72521715 72521622 ID=MsG0680033744.01.T01:exon:4109;Parent=MsG0680033744.01.T01
Chr6 exon 72521136 72521230 72521136 ID=MsG0680033744.01.T01:exon:4108;Parent=MsG0680033744.01.T01
Chr6 exon 72520568 72520636 72520568 ID=MsG0680033744.01.T01:exon:4107;Parent=MsG0680033744.01.T01
Chr6 exon 72520266 72520480 72520266 ID=MsG0680033744.01.T01:exon:4106;Parent=MsG0680033744.01.T01
Chr6 exon 72520112 72520163 72520112 ID=MsG0680033744.01.T01:exon:4105;Parent=MsG0680033744.01.T01
Chr6 exon 72519541 72519672 72519541 ID=MsG0680033744.01.T01:exon:4104;Parent=MsG0680033744.01.T01
Chr6 exon 72518662 72519228 72518662 ID=MsG0680033744.01.T01:exon:4103;Parent=MsG0680033744.01.T01
Chr6 CDS 72518662 72519228 72518662 ID=MsG0680033744.01.T01:cds;Parent=MsG0680033744.01.T01
Chr6 CDS 72519541 72519672 72519541 ID=MsG0680033744.01.T01:cds;Parent=MsG0680033744.01.T01
Chr6 CDS 72520112 72520163 72520112 ID=MsG0680033744.01.T01:cds;Parent=MsG0680033744.01.T01
Chr6 CDS 72520266 72520480 72520266 ID=MsG0680033744.01.T01:cds;Parent=MsG0680033744.01.T01
Chr6 CDS 72520568 72520636 72520568 ID=MsG0680033744.01.T01:cds;Parent=MsG0680033744.01.T01
Chr6 CDS 72521136 72521230 72521136 ID=MsG0680033744.01.T01:cds;Parent=MsG0680033744.01.T01
Chr6 CDS 72521622 72521715 72521622 ID=MsG0680033744.01.T01:cds;Parent=MsG0680033744.01.T01
Chr6 CDS 72521839 72521908 72521839 ID=MsG0680033744.01.T01:cds;Parent=MsG0680033744.01.T01
Chr6 CDS 72522149 72522651 72522149 ID=MsG0680033744.01.T01:cds;Parent=MsG0680033744.01.T01
Gene Sequence

>MsG0680033744.01.T01

ATGGATGGTTCCTCTGTAGTACAGCAGAATTCTCATCAAGATCAGAATGCTCAACAGTTGCAGCAGAATCAACAGAAGCTGCAGGGTGGTTCAAGTTCTATGCTTTTGCCTGCTTCTCAAGCTGGCTCATCTTCGCACCAAACGGGTGCACAAGTGCCTGGATCTTTCACGGGTGCACAAGTGCCTGGATCTTTCACTCAAGATCCAAATAATATATCCCACCTGCTGAAAAAACGTAGGCTGGATATCAAACAAGATGATATAATGCAACAGCAGGTAATACAGCAGCTTCTTCAGAGACAAGACCCCACACAATTCCAAAATCGTAATCCACAGTTACAGGCTATGTTTCAGCAACAGAGGCTGAAGCAACAACAAATCTTTCAGTCGTTGCCCCCGGCTCAGCAACAAATCTTTCAGTCATTACCCCAGGCTCAGCGAATGCAGTTTCTGCAGCAACAACAGCAGCAGCAACAACAGCAAATGCAGAGGCAGCAAATACCACAGCAAATGATGCAGCCCTCAGCTGGTGTGAAGCGTCCGTATGATGGTGGTGGTGTTGGAGGTGATAATAGTATTGCATATTGGAGAAAATTTGTGGCTGAATATTACTCTCCTCGTGCAAAGCAACGATGGTGCTTAGCATTATATAGTAACGTTGGACACCATTCAGCTGGTGTTTTACCCCAGGCAACTACGCATGCTTGGCAGTGTGACATATGCGGAACTAAATCTGGAAGAAGGGGATTTGAGGCAACTTTTGATATACTACCCAGACTTAACGTAGTCAAATTTGGTGGTGGAGTGATCGATGAACTTTTGTTTTTGGACTTGCCGCGTGAAGTAAGATTTCCTTCTGGGTTGATGATGTTAGAATATACCAAAGCAGTTCAAGAGTGTGTGTATGAGCAGCTTCGTGTTGTTCGTGAGGGTCAACTTCGTATCGTATTTACTCAAGACCTAAAGATATTTTCTTGGGATTTCTGTGTAAGGCGCCACGAAGAACTTCTTCCTCGAAAGTTAGTTGCACCACAGGTCAACCAATTAGTTCAGGTTGCTCAAAAATGCCAGAGTACAATTTCTGAAAGTGGGTCAGATGGGGTCTCTCAGCAAGACTTGCAAAACAAACAGGTCCTGACTGCTGGGCGTCAGCTTGCGAAGAGTTTGGAGCTACAATCACTAAATGACTTGGGATTTTCGAAAAGATTTGTTAGAACTTTGCAGATTTCTGAAGTTTGCAATAGCATGAAAGATCTAATCGATATATGTTTTGATCACAACGTTGGAGCACTTGAGAGTTTGAAAAATTATTCTCAATATTCAACCACCCCAAAGCTCCAAATGCAAAAGATGCAGGAGATGGAACAGGCAGCAAATGGTCAAGGACCCCCACCTGATCAAAACACACTTAATAAGCTGATGGCATTGAATCCTGGACCAAACAATCACATAAGCAATAGTAATCACAATATGGGCAATCGTGGTGCTTTGACCGGGCCATCACAAGCTGCTATGGCAATGTCCAATTACCAGAATCTTCTGATGAGGCAAAACTCAATGAATTCAAGCCCTGGCTCACTTCATCGAGAAGGGTCCCCTTTCAGTAACTCAAACCAGAATCCCTCACCAGCTTCTTTGCAAGGTGCTGGGGCTGCTATAATCCCAGGCTCTATGCAGAATTCACCTCACAACAGTAGTGGTGGATTCTCAAATCCCCCTACCCTCACTACAGCAGCGACAGCAGCAGCAGCAGCAGCAACAACCACACCTTCAACAGCGCTCATTAAGTGCAAATAA
Protein sequence

>MsG0680033744.01.T01

MDGSSVVQQNSHQDQNAQQLQQNQQKLQGGSSSMLLPASQAGSSSHQTGAQVPGSFTGAQVPGSFTQDPNNISHLLKKRRLDIKQDDIMQQQVIQQLLQRQDPTQFQNRNPQLQAMFQQQRLKQQQIFQSLPPAQQQIFQSLPQAQRMQFLQQQQQQQQQQMQRQQIPQQMMQPSAGVKRPYDGGGVGGDNSIAYWRKFVAEYYSPRAKQRWCLALYSNVGHHSAGVLPQATTHAWQCDICGTKSGRRGFEATFDILPRLNVVKFGGGVIDELLFLDLPREVRFPSGLMMLEYTKAVQECVYEQLRVVREGQLRIVFTQDLKIFSWDFCVRRHEELLPRKLVAPQVNQLVQVAQKCQSTISESGSDGVSQQDLQNKQVLTAGRQLAKSLELQSLNDLGFSKRFVRTLQISEVCNSMKDLIDICFDHNVGALESLKNYSQYSTTPKLQMQKMQEMEQAANGQGPPPDQNTLNKLMALNPGPNNHISNSNHNMGNRGALTGPSQAAMAMSNYQNLLMRQNSMNSSPGSLHREGSPFSNSNQNPSPASLQGAGAAIIPGSMQNSPHNSSGGFSNPPTLTTAATAAAAAATTTPSTALIKCK*