AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004954.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004954.01.T01 MTR_1g090340 47.166 441 58 12 162 435 396 828 3.05e-90 298
MsG0180004954.01.T01 MTR_1g090340 85.526 76 11 0 8 83 87 162 1.30e-36 143
MsG0180004954.01.T01 MTR_1g090340 38.983 177 55 4 10 137 105 277 1.69e-23 104
MsG0180004954.01.T01 MTR_1g040610 46.078 102 49 3 203 304 478 573 4.01e-11 65.9
MsG0180004954.01.T01 MTR_1g040610 46.078 102 49 3 203 304 328 423 4.35e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 259 sgRNAs with CRISPR-Local

Find 569 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACCCAGCAATTCTCTATT+TGG 0.157350 1:+84922994 MsG0180004954.01.T01:three_prime_UTR
AAGACCATTGTTTATGAAAA+TGG 0.179777 1:+84923594 MsG0180004954.01.T01:three_prime_UTR
ATATCATACAATAACAAAAT+TGG 0.202564 1:-84923784 None:intergenic
ACCAATAGTATATTCAAATT+TGG 0.208383 1:+84922092 MsG0180004954.01.T01:three_prime_UTR
CCTTCTCCATTTCAGGCTTC+TGG 0.214633 1:+84923460 MsG0180004954.01.T01:three_prime_UTR
CCTAACCCTGTCTTTGCTTT+TGG 0.214706 1:+84923176 MsG0180004954.01.T01:three_prime_UTR
ACAGAACCCTTCTCCATTTC+AGG 0.224310 1:+84923453 MsG0180004954.01.T01:three_prime_UTR
GGCACAGGCTCTAGTTTATT+GGG 0.249498 1:+84922959 MsG0180004954.01.T01:three_prime_UTR
AACAGTTCAAATCAAAATAA+TGG 0.254853 1:+84922202 MsG0180004954.01.T01:three_prime_UTR
AATAATTTGGATGGCACATT+TGG 0.263943 1:+84920240 MsG0180004954.01.T01:CDS
GGTAAGACAGATATTTCTTC+TGG 0.266025 1:+84922781 MsG0180004954.01.T01:three_prime_UTR
CATAGTTCAAATCAAAATAA+TGG 0.267600 1:+84922116 MsG0180004954.01.T01:three_prime_UTR
GCCTTATAGTGTTGCTCATT+TGG 0.267780 1:+84923687 MsG0180004954.01.T01:three_prime_UTR
TTGTAACATTACCAGAATTA+GGG 0.274150 1:+84923908 MsG0180004954.01.T01:three_prime_UTR
AACAACTTCCCTTTCAAATT+CGG 0.289444 1:+84922430 MsG0180004954.01.T01:three_prime_UTR
TCTGCATCATCCCCATTGTT+TGG 0.293412 1:+84922751 MsG0180004954.01.T01:three_prime_UTR
GGTTTATCTGTATCATCTTC+TGG 0.293884 1:+84922474 MsG0180004954.01.T01:three_prime_UTR
GGCTCAAAACCACTGGAAAC+TGG 0.296758 1:+84922495 MsG0180004954.01.T01:three_prime_UTR
ATAACTTCATCCCCTAATTC+TGG 0.299480 1:-84923919 None:intergenic
CAGTTTACAAGGAAATAATT+TGG 0.305513 1:+84920227 MsG0180004954.01.T01:CDS
TTTCAATTCGGTACAACATT+TGG 0.315610 1:+84922893 MsG0180004954.01.T01:three_prime_UTR
TCATCACCTTTGTCCGGGTT+TGG 0.321223 1:+84923030 MsG0180004954.01.T01:three_prime_UTR
GCCAAATTTGAATATACTAT+TGG 0.321685 1:-84922093 None:intergenic
GTTGTAACATTACCAGAATT+AGG 0.322761 1:+84923907 MsG0180004954.01.T01:three_prime_UTR
CTGCAGCTTACTACTGTTGC+TGG 0.325566 1:+84921938 MsG0180004954.01.T01:intron
TCACAGGTTTCCACTCCTTC+AGG 0.336019 1:+84923388 MsG0180004954.01.T01:three_prime_UTR
TGGCACAGGCTCTAGTTTAT+TGG 0.336715 1:+84922958 MsG0180004954.01.T01:three_prime_UTR
TGCTTTCTATCACCTGCTTC+AGG 0.337816 1:+84923618 MsG0180004954.01.T01:three_prime_UTR
GACTTGATTGCTTGACTTTG+TGG 0.340249 1:-84920385 None:intergenic
GCCAAATGAGCAACACTATA+AGG 0.341938 1:-84923688 None:intergenic
ATTGCGGACAAAGTTTCTTC+TGG 0.345155 1:+84920865 MsG0180004954.01.T01:CDS
ACTACTGTTGCTGGTTCAAC+TGG 0.345652 1:+84921947 MsG0180004954.01.T01:CDS
ATTGGAGCATCCACTCATTC+AGG 0.346007 1:+84923325 MsG0180004954.01.T01:three_prime_UTR
CCAAAAGCAAAGACAGGGTT+AGG 0.346106 1:-84923176 None:intergenic
AATACAAAATTTGATTGAAC+CGG 0.346637 1:-84923305 None:intergenic
CTCATCTGATCATTATTAAC+TGG 0.351705 1:-84923206 None:intergenic
AAATAATGGGTCCTTGCTTC+AGG 0.353132 1:+84922216 MsG0180004954.01.T01:three_prime_UTR
AGCCAGTCTCAGAGTTATTT+CGG 0.355955 1:+84922641 MsG0180004954.01.T01:three_prime_UTR
ATTTCAGGCTTCTGGCAGTC+TGG 0.356218 1:+84923468 MsG0180004954.01.T01:three_prime_UTR
TGTTCTGTTGACTTGCAAAC+TGG 0.358081 1:-84923360 None:intergenic
GCACCTACAATAACAACTTT+TGG 0.358854 1:+84921032 MsG0180004954.01.T01:CDS
TCAAAAGAAGCACCAAATTT+CGG 0.367481 1:-84921319 None:intergenic
GCTGCCAGTGGTTCTCTGTT+TGG 0.373016 1:+84922665 MsG0180004954.01.T01:three_prime_UTR
CTGCATCATCCCCATTGTTT+GGG 0.382516 1:+84922752 MsG0180004954.01.T01:three_prime_UTR
AGACCAAAAGTTGTTATTGT+AGG 0.387403 1:-84921035 None:intergenic
CACCTCCACACAGCCTGCTT+TGG 0.389391 1:+84923149 MsG0180004954.01.T01:three_prime_UTR
TTCTTTCCTGTCACATCAGC+AGG 0.390669 1:+84922453 MsG0180004954.01.T01:three_prime_UTR
GGTGAGTCTACTCCGAAATT+TGG 0.393110 1:+84921307 MsG0180004954.01.T01:CDS
TACAATAGGAACCGATTCAT+TGG 0.400103 1:-84920349 None:intergenic
GGAACCAAATAGAGAATTGC+TGG 0.400476 1:-84922998 None:intergenic
GGATTAGCAGTTGACCCATT+TGG 0.402733 1:-84921073 None:intergenic
TGGAGGCAAACATGGTGAAC+TGG 0.403850 1:-84923078 None:intergenic
ACAGTTCAAATCAAAATAAT+GGG 0.411948 1:+84922203 MsG0180004954.01.T01:three_prime_UTR
TTTAGTTCATCACCTTTGTC+CGG 0.413750 1:+84923024 MsG0180004954.01.T01:three_prime_UTR
GACAAGCCTGCTTTACCAAA+TGG 0.414744 1:+84921058 MsG0180004954.01.T01:CDS
TTAACTTTATCTAGCAGAAC+AGG 0.416107 1:-84919958 None:intergenic
GAAGAAGCAACAAGTTTCAA+TGG 0.417783 1:-84920327 None:intergenic
AATCAAAATAATGGGTCTCT+TGG 0.417923 1:+84922125 MsG0180004954.01.T01:three_prime_UTR
AATAATGGGTCTCTTGGTTC+AGG 0.418508 1:+84922131 MsG0180004954.01.T01:three_prime_UTR
ATACCTCGTGTGCACTCATA+TGG 0.418721 1:-84920473 None:intergenic
ATAGTTCAAATCAAAATAAT+GGG 0.419081 1:+84922117 MsG0180004954.01.T01:three_prime_UTR
GCTGTACTTGTAGTGATTCT+AGG 0.419671 1:+84923821 MsG0180004954.01.T01:three_prime_UTR
TCAACAGAACATTGCTTCAC+AGG 0.421946 1:+84923372 MsG0180004954.01.T01:three_prime_UTR
GATGAAGTTATAAGCTTAGC+TGG 0.424310 1:+84923931 MsG0180004954.01.T01:three_prime_UTR
TGTTCTGTTGACTAGCAAAC+TGG 0.425438 1:-84923423 None:intergenic
GGTGAAGCAACATCCTCAAT+AGG 0.426725 1:-84919215 None:intergenic
GGTAGATGCGTCAAAATTGC+CGG 0.431208 1:+84920203 MsG0180004954.01.T01:CDS
TATCATACAATAACAAAATT+GGG 0.432126 1:-84923783 None:intergenic
TACCGAATTGAAAACGTTAG+TGG 0.433668 1:-84922883 None:intergenic
TGTTGCTTCTTCCAATGAAT+CGG 0.436206 1:+84920338 MsG0180004954.01.T01:CDS
TCCCCATTGTTTGGGTCGAC+TGG 0.438863 1:+84922760 MsG0180004954.01.T01:three_prime_UTR
CACCACTGGGGTGGAGGAAG+AGG 0.441878 1:-84922393 None:intergenic
ATCAGCATATCGAAACTTGT+TGG 0.443393 1:+84923737 MsG0180004954.01.T01:three_prime_UTR
GTCAATTTCACATAGAGATA+AGG 0.443437 1:+84920293 MsG0180004954.01.T01:CDS
GATGAGTATGGTGGACAGTA+TGG 0.443452 1:+84923223 MsG0180004954.01.T01:three_prime_UTR
GCAGTGCTCTATCTGTCTAT+AGG 0.444056 1:+84919884 MsG0180004954.01.T01:intron
AATTGTTCTGACTCGGATCA+AGG 0.444719 1:+84917952 MsG0180004954.01.T01:CDS
ATCTGTCTATAGGAACGGAT+TGG 0.444900 1:+84919894 MsG0180004954.01.T01:CDS
TACCAGTCGACCCAAACAAT+GGG 0.445027 1:-84922762 None:intergenic
TCCCAAGCTTCTCCTTCTGC+CGG 0.445602 1:+84922689 MsG0180004954.01.T01:three_prime_UTR
GGCTCTTCGAAGCTTGGAAA+TGG 0.446069 1:+84920182 MsG0180004954.01.T01:intron
TCAATTTCACATAGAGATAA+GGG 0.446895 1:+84920294 MsG0180004954.01.T01:CDS
TAATAATGATCAGATGAGTA+TGG 0.453027 1:+84923211 MsG0180004954.01.T01:three_prime_UTR
TTATACCCCTTGTGTAGATC+CGG 0.453677 1:-84919663 None:intergenic
AAATTTGATTGAACCGGGGC+AGG 0.459067 1:-84923299 None:intergenic
GAATTTAATGCAGGAGGAGG+AGG 0.460153 1:+84923490 MsG0180004954.01.T01:three_prime_UTR
TTATTTCCTTGTAAACTGTC+CGG 0.461528 1:-84920222 None:intergenic
CAGGTTGCAAAAGAATCTTC+TGG 0.461777 1:+84917889 MsG0180004954.01.T01:intron
GTAAGACAGATATTTCTTCT+GGG 0.463753 1:+84922782 MsG0180004954.01.T01:three_prime_UTR
GGCAGTTCTTCTGCTGCAGT+TGG 0.466285 1:+84922563 MsG0180004954.01.T01:three_prime_UTR
GGGACAGGCTCTTCGAAGCT+TGG 0.467458 1:+84920176 MsG0180004954.01.T01:intron
AGAGCTTGCAAAAGCTTACA+TGG 0.468352 1:+84919241 MsG0180004954.01.T01:CDS
CTCTTCCTCCACCCCAGTGG+TGG 0.468523 1:+84922394 MsG0180004954.01.T01:three_prime_UTR
TAGTTTAGCAGCACTGCATT+TGG 0.470905 1:+84922542 MsG0180004954.01.T01:three_prime_UTR
AACCACTGGAAACTGGGAAC+AGG 0.470991 1:+84922502 MsG0180004954.01.T01:three_prime_UTR
CAAAGCAGGCTGTGTGGAGG+TGG 0.472012 1:-84923148 None:intergenic
AGACTGCCAGAAGCCTGAAA+TGG 0.477481 1:-84923466 None:intergenic
ACTGAAGTGCGGCCTGAAGC+AGG 0.478306 1:-84923630 None:intergenic
AGCTCTTCATCAATGACAGC+TGG 0.480057 1:+84922614 MsG0180004954.01.T01:three_prime_UTR
GTTGACCCATTTGGTAAAGC+AGG 0.480336 1:-84921064 None:intergenic
CTCAGCCGGGAGGATCAATC+AGG 0.481155 1:+84921344 MsG0180004954.01.T01:CDS
TTGAGGGACTTTCATGTGCA+TGG 0.481883 1:-84920896 None:intergenic
ACAAGCCTGCTTTACCAAAT+GGG 0.484505 1:+84921059 MsG0180004954.01.T01:CDS
CGGCACATCTGCTTCCTCTT+CGG 0.484850 1:+84922919 MsG0180004954.01.T01:three_prime_UTR
CCGCCTGCGAGTCCTATGTT+TGG 0.486080 1:+84923269 MsG0180004954.01.T01:three_prime_UTR
AGCAGGCTGTGTGGAGGTGG+AGG 0.487226 1:-84923145 None:intergenic
GTCTCTGTAGTGGTTACAAT+AGG 0.489396 1:-84920363 None:intergenic
AGGGTTAGGGCTTCCAAAGC+AGG 0.491858 1:-84923162 None:intergenic
AAAACTGAGGACTGAGGCAC+TGG 0.492380 1:-84923104 None:intergenic
ACCGGCAGAAGGAGAAGCTT+GGG 0.492443 1:-84922690 None:intergenic
TGGGGAAGCAACAGTAGTAC+TGG 0.495615 1:-84923058 None:intergenic
TGACTTCTGATTCTGAGCAC+TGG 0.498162 1:-84920274 None:intergenic
TGGCATGATCCATTGCAGAC+TGG 0.498197 1:-84919635 None:intergenic
GGAAAGAACCGAATTTGAAA+GGG 0.498862 1:-84922438 None:intergenic
AATGCCACCACTTGCAGAAA+GGG 0.499032 1:-84922301 None:intergenic
CGTCTTCACCCAGTCTGCAA+TGG 0.499268 1:+84919626 MsG0180004954.01.T01:CDS
TCATGCACTTCATTGATATG+TGG 0.501062 1:+84916702 None:intergenic
CAAAAGCTTACATGGGGAGC+AGG 0.501625 1:+84919249 MsG0180004954.01.T01:CDS
GAGGACTGAGGCACTGGTCG+TGG 0.501906 1:-84923098 None:intergenic
TCAGGTGGTGGTGATAAGTC+TGG 0.504936 1:+84923528 MsG0180004954.01.T01:three_prime_UTR
GCTCAAAACCACTGGAAACT+GGG 0.505159 1:+84922496 MsG0180004954.01.T01:three_prime_UTR
GAAGACGAAGTTGCCACCAC+TGG 0.505229 1:-84922407 None:intergenic
GGCATGATCCATTGCAGACT+GGG 0.507556 1:-84919634 None:intergenic
GGAGGCAAACATGGTGAACT+GGG 0.510626 1:-84923077 None:intergenic
AAATTGCCGGACAGTTTACA+AGG 0.511006 1:+84920216 MsG0180004954.01.T01:CDS
ATCTTCTGGCTCAAAACCAC+TGG 0.517539 1:+84922488 MsG0180004954.01.T01:three_prime_UTR
AACAGGCAAGATGCAGGAAT+CGG 0.519078 1:+84922519 MsG0180004954.01.T01:three_prime_UTR
TATTGATATGAGAGATGGAA+AGG 0.519589 1:-84922171 None:intergenic
TGTTGACTTGCAAACTGGAA+AGG 0.519749 1:-84923355 None:intergenic
TGACTTTGTGGTCTCTGTAG+TGG 0.520401 1:-84920373 None:intergenic
TCTGTCTATAGGAACGGATT+GGG 0.521019 1:+84919895 MsG0180004954.01.T01:CDS
GGCAGTCTGGAATTTAATGC+AGG 0.521137 1:+84923481 MsG0180004954.01.T01:three_prime_UTR
AGGAGGAGGGAGTTCTCGTT+AGG 0.522409 1:+84923504 MsG0180004954.01.T01:three_prime_UTR
AAATTTGAATATACTATTGG+TGG 0.523387 1:-84922090 None:intergenic
GCTGAACCAAAAGCAAAGAC+AGG 0.524662 1:-84923182 None:intergenic
AGTTGCCACCACTGGGGTGG+AGG 0.525704 1:-84922399 None:intergenic
CACCGGCAGAAGGAGAAGCT+TGG 0.526121 1:-84922691 None:intergenic
AGCTCGTCCCTTTCTGCAAG+TGG 0.528280 1:+84922294 MsG0180004954.01.T01:three_prime_UTR
TTACTTGATGCAGCAAGCGC+AGG 0.528307 1:-84922363 None:intergenic
TTACAAGGAAATAATTTGGA+TGG 0.528392 1:+84920231 MsG0180004954.01.T01:CDS
AGGGAGTTCTCGTTAGGCTC+AGG 0.528781 1:+84923510 MsG0180004954.01.T01:three_prime_UTR
AAAGTTATTGATATGAGAGA+TGG 0.529563 1:-84922176 None:intergenic
GGCAATCAACAAAGAGCAGT+TGG 0.530558 1:+84917910 MsG0180004954.01.T01:CDS
GCACAGGCTCTAGTTTATTG+GGG 0.531493 1:+84922960 MsG0180004954.01.T01:three_prime_UTR
AGGAAAGAACCGAATTTGAA+AGG 0.532363 1:-84922439 None:intergenic
TCAAATTAATTGTTCTGACT+CGG 0.532747 1:+84917945 MsG0180004954.01.T01:CDS
GAATCTGATAGTGGTGATGC+TGG 0.533520 1:+84921989 MsG0180004954.01.T01:CDS
AATGCCACTTCTGCTTCCAC+TGG 0.537743 1:+84922324 MsG0180004954.01.T01:three_prime_UTR
TTAGTTCATCACCTTTGTCC+GGG 0.539929 1:+84923025 MsG0180004954.01.T01:three_prime_UTR
ATATTCAGCAGATCGCTCAT+TGG 0.540089 1:-84923971 None:intergenic
TAATGCCACCACTTGCAGAA+AGG 0.540251 1:-84922302 None:intergenic
GATAAACCTGCTGATGTGAC+AGG 0.541608 1:-84922459 None:intergenic
CCAGAAGCCTGAAATGGAGA+AGG 0.542747 1:-84923460 None:intergenic
ACGTTAGTGGTAGAACTTGA+AGG 0.544064 1:-84922870 None:intergenic
GGAAAGGAAGAAGAAAATGA+AGG 0.544776 1:-84922155 None:intergenic
AAGACGAAGTTGCCACCACT+GGG 0.547031 1:-84922406 None:intergenic
ACTGGGAACAGGCAAGATGC+AGG 0.547845 1:+84922513 MsG0180004954.01.T01:three_prime_UTR
TAGCATTGATGAGGATACAT+TGG 0.548947 1:-84919276 None:intergenic
TCAAGAAGAAGCTGTAGAGA+TGG 0.549972 1:+84916770 MsG0180004954.01.T01:CDS
TTCCAAAGCAGGCTGTGTGG+AGG 0.550135 1:-84923151 None:intergenic
GATGGAACAAGAAATGAGAC+AGG 0.553317 1:+84916788 MsG0180004954.01.T01:CDS
TTCTCGTTAGGCTCAGGTGG+TGG 0.553483 1:+84923516 MsG0180004954.01.T01:three_prime_UTR
ATTGTTCTGACTCGGATCAA+GGG 0.555820 1:+84917953 MsG0180004954.01.T01:CDS
CAAAGGTGATGAACTAAATG+AGG 0.556255 1:-84923019 None:intergenic
GTTTGGTCAACAACCTGCCC+CGG 0.557893 1:+84923286 MsG0180004954.01.T01:three_prime_UTR
ATGCAGATGATTGAACTGAC+TGG 0.558405 1:-84922735 None:intergenic
ATGTCCATAGGTTCCTATTG+AGG 0.560616 1:+84919202 MsG0180004954.01.T01:intron
AATTCCAGTGGAAGCAGAAG+TGG 0.561345 1:-84922328 None:intergenic
CGTGCGATATCCTGCTCGTA+GGG 0.564190 1:+84919301 MsG0180004954.01.T01:CDS
AGGCTTATGCAAGGAAGATG+AGG 0.564196 1:-84919938 None:intergenic
GGAACGGAAGAAGAGAATGA+AGG 0.564570 1:-84922240 None:intergenic
ACTGGTCGTGGAGGCAAACA+TGG 0.565282 1:-84923086 None:intergenic
AAAGTTTGTGAATCTGATAG+TGG 0.567452 1:+84921980 MsG0180004954.01.T01:CDS
AAGTTATTTGATACAAGAGA+TGG 0.567482 1:-84922261 None:intergenic
CACCGAAATAACTCTGAGAC+TGG 0.567532 1:-84922643 None:intergenic
AGTTATTTCGGTGCTGCCAG+TGG 0.568361 1:+84922653 MsG0180004954.01.T01:three_prime_UTR
TGCCTGTTCCCAGTTTCCAG+TGG 0.568878 1:-84922504 None:intergenic
GTCAACTCTAGTAGTGGCAC+AGG 0.569586 1:+84922944 MsG0180004954.01.T01:three_prime_UTR
AGAATGAAGGGCCTGAAGCA+AGG 0.570812 1:-84922227 None:intergenic
AGTACTGGACGTTCCAAACC+CGG 0.574845 1:-84923043 None:intergenic
AATGGATCATGCCATGTCAC+CGG 0.576155 1:+84919644 MsG0180004954.01.T01:CDS
ATACAAAATTTGATTGAACC+GGG 0.578119 1:-84923304 None:intergenic
GTTGTGTCTTCCCTACGAGC+AGG 0.579803 1:-84919311 None:intergenic
TTGTTCTGACTCGGATCAAG+GGG 0.579850 1:+84917954 MsG0180004954.01.T01:CDS
ACTTGCAAACTGGAAAGGAC+TGG 0.580401 1:-84923350 None:intergenic
CTGGAATTTAATGCAGGAGG+AGG 0.581117 1:+84923487 MsG0180004954.01.T01:three_prime_UTR
GGAACCAAACAGAGAACCAC+TGG 0.582317 1:-84922669 None:intergenic
GACTGAGGCACTGGTCGTGG+AGG 0.583882 1:-84923095 None:intergenic
AATTTAATGCAGGAGGAGGA+GGG 0.587411 1:+84923491 MsG0180004954.01.T01:three_prime_UTR
CTTGTGTAGATCCGGTGACA+TGG 0.589070 1:-84919655 None:intergenic
TGGAAAGGACTGGTTCCTGA+AGG 0.589778 1:-84923403 None:intergenic
AATGTATCCTCATCAATGCT+AGG 0.589876 1:+84919278 MsG0180004954.01.T01:CDS
GCTCTATCTGTCTATAGGAA+CGG 0.590357 1:+84919889 MsG0180004954.01.T01:CDS
ATTTGATACAAGAGATGGAA+CGG 0.591195 1:-84922256 None:intergenic
GAAAGGAAGAAGAAAATGAA+GGG 0.591845 1:-84922154 None:intergenic
CGAAGTTGCCACCACTGGGG+TGG 0.592898 1:-84922402 None:intergenic
CACAGGATACAAAACATGCC+TGG 0.594794 1:-84918019 None:intergenic
TTCGGTACAACATTTGGACT+CGG 0.596719 1:+84922899 MsG0180004954.01.T01:three_prime_UTR
ACTAGAGTTGACTGCCGAAG+AGG 0.598696 1:-84922933 None:intergenic
TTTGTTGCGCTACTGAAGTG+CGG 0.603596 1:-84923641 None:intergenic
TGCAGATGATTGAACTGACT+GGG 0.603948 1:-84922734 None:intergenic
AGGACTGGTTCCTGAAGGAG+TGG 0.605017 1:-84923398 None:intergenic
AACTTTGTCCGCAATAACAA+TGG 0.606109 1:-84920857 None:intergenic
CAAAAGCAAAGACAGGGTTA+GGG 0.607195 1:-84923175 None:intergenic
AATCTGATAGTGGTGATGCT+GGG 0.607337 1:+84921990 MsG0180004954.01.T01:CDS
GAACGGAAGAAGAGAATGAA+GGG 0.607896 1:-84922239 None:intergenic
CAATACCACAGATGATGTTG+AGG 0.608435 1:-84920913 None:intergenic
TTTCCGCAGAAGAAAAGAGA+CGG 0.608543 1:-84920819 None:intergenic
GTTGGAACAAGAAATGAGAC+AGG 0.613639 1:+84916740 MsG0180004954.01.T01:CDS
CAGAAGCCTGAAATGGAGAA+GGG 0.613804 1:-84923459 None:intergenic
GGCTTCCAAAGCAGGCTGTG+TGG 0.614263 1:-84923154 None:intergenic
GTGTTGCTCATTTGGCGATG+TGG 0.614347 1:+84923695 MsG0180004954.01.T01:three_prime_UTR
ACTAACCTGATTGATCCTCC+CGG 0.615018 1:-84921349 None:intergenic
GTCCTCTTCCTCCACCCCAG+TGG 0.615422 1:+84922391 MsG0180004954.01.T01:three_prime_UTR
AATACCACAGATGATGTTGA+GGG 0.616813 1:-84920912 None:intergenic
AGGACTGGTTCCTGAATGAG+TGG 0.618361 1:-84923335 None:intergenic
AGTGTAAATACACCGGCAGA+AGG 0.619272 1:-84922701 None:intergenic
TGAAATGGAGAAGGGTTCTG+TGG 0.619865 1:-84923451 None:intergenic
CAAAATTGGGAACATATCGA+AGG 0.621874 1:-84923770 None:intergenic
GACGTTCCAAACCCGGACAA+AGG 0.621900 1:-84923036 None:intergenic
TGACCAAACATAGGACTCGC+AGG 0.622086 1:-84923272 None:intergenic
GAGCTTGCAAAAGCTTACAT+GGG 0.622577 1:+84919242 MsG0180004954.01.T01:CDS
GCGTGCGATATCCTGCTCGT+AGG 0.623393 1:+84919300 MsG0180004954.01.T01:CDS
AGTTGTCATGCTAATTCCAG+TGG 0.625982 1:-84922340 None:intergenic
GCAGGTTGTTGACCAAACAT+AGG 0.627604 1:-84923281 None:intergenic
TCGGCAGTCAACTCTAGTAG+TGG 0.628156 1:+84922938 MsG0180004954.01.T01:three_prime_UTR
CATGTCACCGGATCTACACA+AGG 0.629012 1:+84919656 MsG0180004954.01.T01:CDS
TCGTCCCTTTCTGCAAGTGG+TGG 0.630857 1:+84922297 MsG0180004954.01.T01:three_prime_UTR
ACTAGCAAACTGGAAAGGAC+TGG 0.630992 1:-84923413 None:intergenic
TGTAACATTACCAGAATTAG+GGG 0.633164 1:+84923909 MsG0180004954.01.T01:three_prime_UTR
GAGTTCTCGTTAGGCTCAGG+TGG 0.635103 1:+84923513 MsG0180004954.01.T01:three_prime_UTR
TTACCAGTCGACCCAAACAA+TGG 0.636268 1:-84922763 None:intergenic
TGTTGACTAGCAAACTGGAA+AGG 0.636542 1:-84923418 None:intergenic
TAGCAGAACAGGCTTATGCA+AGG 0.642482 1:-84919947 None:intergenic
GGCTTATGCAAGGAAGATGA+GGG 0.642655 1:-84919937 None:intergenic
GAACCAAATAGAGAATTGCT+GGG 0.645460 1:-84922997 None:intergenic
CTGAACCAAAAGCAAAGACA+GGG 0.645570 1:-84923181 None:intergenic
AATGTTACAACTTACAAGTG+AGG 0.645695 1:-84923895 None:intergenic
TACAAAATTTGATTGAACCG+GGG 0.650279 1:-84923303 None:intergenic
TAATGATCAGATGAGTATGG+TGG 0.652388 1:+84923214 MsG0180004954.01.T01:three_prime_UTR
AGTCTGGAATTTAATGCAGG+AGG 0.655425 1:+84923484 MsG0180004954.01.T01:three_prime_UTR
ATTCCATATGAGTGCACACG+AGG 0.656885 1:+84920470 MsG0180004954.01.T01:CDS
AAGTCCCTCAACATCATCTG+TGG 0.664811 1:+84920908 MsG0180004954.01.T01:CDS
AATGGAGAAGGGTTCTGTGG+AGG 0.665595 1:-84923448 None:intergenic
AGCTTGCAAAAGCTTACATG+GGG 0.668348 1:+84919243 MsG0180004954.01.T01:CDS
TGCAGACTGGGTGAAGACGA+AGG 0.668350 1:-84919622 None:intergenic
GAGTAGAAGTGTAAATACAC+CGG 0.669170 1:-84922708 None:intergenic
TATGGTGGACAGTATGGCTG+AGG 0.670674 1:+84923229 MsG0180004954.01.T01:three_prime_UTR
TGAAGCATAAGACTTTCACC+AGG 0.685974 1:+84918001 MsG0180004954.01.T01:CDS
TCGCACGCCTAGCATTGATG+AGG 0.686079 1:-84919285 None:intergenic
TGTCACCGGATCTACACAAG+GGG 0.688584 1:+84919658 MsG0180004954.01.T01:CDS
GAGGCAAACATGGTGAACTG+GGG 0.709251 1:-84923076 None:intergenic
ATGTCACCGGATCTACACAA+GGG 0.713040 1:+84919657 MsG0180004954.01.T01:CDS
ACCAGTCGACCCAAACAATG+GGG 0.714983 1:-84922761 None:intergenic
TGTTCTGACTCGGATCAAGG+GGG 0.729066 1:+84917955 MsG0180004954.01.T01:CDS
GCTGAAGTGAATGAAAACTG+AGG 0.730359 1:-84923117 None:intergenic
TGAATGAAAACTGAGGACTG+AGG 0.758223 1:-84923110 None:intergenic
CCAAACATAGGACTCGCAGG+CGG 0.769585 1:-84923269 None:intergenic
AGACGAAGTTGCCACCACTG+GGG 0.787620 1:-84922405 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAATCAAACAAATAAATTA+GGG - Chr1:84919119-84919138 None:intergenic 15.0%
!! ATAGTTCAAATCAAAATAAT+GGG + Chr1:84922117-84922136 MsG0180004954.01.T01:three_prime_UTR 15.0%
!! ATATCATACAATAACAAAAT+TGG - Chr1:84923787-84923806 None:intergenic 15.0%
!! ATTATGATACAAAATAATTC+AGG - Chr1:84919529-84919548 None:intergenic 15.0%
!! CTATATTATATATTGAGTAT+TGG + Chr1:84917787-84917806 MsG0180004954.01.T01:intron 15.0%
!! GATAATTTATAGTAAAATGT+TGG + Chr1:84918141-84918160 MsG0180004954.01.T01:intron 15.0%
!! TAAATCAAAGTAAAAACAAA+TGG - Chr1:84921463-84921482 None:intergenic 15.0%
!! TAGAATCAAACAAATAAATT+AGG - Chr1:84919120-84919139 None:intergenic 15.0%
!! TATCATACAATAACAAAATT+GGG - Chr1:84923786-84923805 None:intergenic 15.0%
!!! AAATCAATCTTTATTTCTAT+TGG + Chr1:84917761-84917780 MsG0180004954.01.T01:intron 15.0%
!!! AAATTCTTTTATGATGAAAT+CGG + Chr1:84920419-84920438 MsG0180004954.01.T01:CDS 15.0%
!!! ATATCTTGAAAGATTATTTT+TGG + Chr1:84916871-84916890 MsG0180004954.01.T01:intron 15.0%
!!! TATAAGTAAAAGCATAAATT+TGG - Chr1:84917035-84917054 None:intergenic 15.0%
!!! TATCTTGAAAGATTATTTTT+GGG + Chr1:84916872-84916891 MsG0180004954.01.T01:intron 15.0%
!!! TTTTTACTTTGATTTAGTTT+GGG + Chr1:84921467-84921486 MsG0180004954.01.T01:intron 15.0%
!! AAAAACTTCAAAAACTAAAG+CGG - Chr1:84918238-84918257 None:intergenic 20.0%
!! AAATGATATTTACTAACCAT+GGG + Chr1:84920598-84920617 MsG0180004954.01.T01:intron 20.0%
!! AAATTTGAATATACTATTGG+TGG - Chr1:84922093-84922112 None:intergenic 20.0%
!! AACAGTTCAAATCAAAATAA+TGG + Chr1:84922202-84922221 MsG0180004954.01.T01:three_prime_UTR 20.0%
!! AATACAAAATTTGATTGAAC+CGG - Chr1:84923308-84923327 None:intergenic 20.0%
!! ACAGTTCAAATCAAAATAAT+GGG + Chr1:84922203-84922222 MsG0180004954.01.T01:three_prime_UTR 20.0%
!! ACCAATAGTATATTCAAATT+TGG + Chr1:84922092-84922111 MsG0180004954.01.T01:three_prime_UTR 20.0%
!! AGACTTTGAATTATGAATAT+TGG - Chr1:84919066-84919085 None:intergenic 20.0%
!! ATACAAAATAATTCAGGAAA+AGG - Chr1:84919523-84919542 None:intergenic 20.0%
!! CATAATTATTTAGGAGTAAA+TGG - Chr1:84920637-84920656 None:intergenic 20.0%
!! CATAGTTCAAATCAAAATAA+TGG + Chr1:84922116-84922135 MsG0180004954.01.T01:three_prime_UTR 20.0%
!! CATATTCAAGCATAAAATTA+AGG - Chr1:84918830-84918849 None:intergenic 20.0%
!! CTAGAAAAATTAAACAAAGA+AGG - Chr1:84921097-84921116 None:intergenic 20.0%
!! GAATAATGTTTATAAGTGAT+GGG + Chr1:84917366-84917385 MsG0180004954.01.T01:intron 20.0%
!! TAAATGATATTTACTAACCA+TGG + Chr1:84920597-84920616 MsG0180004954.01.T01:intron 20.0%
!! TCAGTTCTTAGATATTTATT+TGG + Chr1:84920678-84920697 MsG0180004954.01.T01:intron 20.0%
!! TGAATAATGTTTATAAGTGA+TGG + Chr1:84917365-84917384 MsG0180004954.01.T01:intron 20.0%
!! TTGTAACTAAAATGTGTAAT+GGG - Chr1:84918891-84918910 None:intergenic 20.0%
!! TTTAGCATGGATAATAATAT+AGG + Chr1:84919785-84919804 MsG0180004954.01.T01:intron 20.0%
!!! ACAAAATACATTTTTTCTTC+TGG + Chr1:84922834-84922853 MsG0180004954.01.T01:three_prime_UTR 20.0%
!!! AGAAGAAAAAATGTATTTTG+TGG - Chr1:84922835-84922854 None:intergenic 20.0%
!!! ATCTTGAAAGATTATTTTTG+GGG + Chr1:84916873-84916892 MsG0180004954.01.T01:intron 20.0%
!!! ATTTGTTTGATTCTATTTTG+TGG + Chr1:84919125-84919144 MsG0180004954.01.T01:intron 20.0%
!!! ATTTTATATTTCATCATGTC+TGG + Chr1:84916942-84916961 MsG0180004954.01.T01:intron 20.0%
!!! CAAAATACATTTTTTCTTCT+GGG + Chr1:84922835-84922854 MsG0180004954.01.T01:three_prime_UTR 20.0%
!!! CATTATTTTGATTTGAACTA+TGG - Chr1:84922118-84922137 None:intergenic 20.0%
!!! CTGATATTATCTTAAGTTTT+GGG - Chr1:84917241-84917260 None:intergenic 20.0%
!!! GTTTTTACTTTGATTTAGTT+TGG + Chr1:84921466-84921485 MsG0180004954.01.T01:intron 20.0%
!!! TCTGATATTATCTTAAGTTT+TGG - Chr1:84917242-84917261 None:intergenic 20.0%
!!! TTTTACTTTGATTTAGTTTG+GGG + Chr1:84921468-84921487 MsG0180004954.01.T01:intron 20.0%
!!! TTTTATTTTCCTTGATAGTA+TGG + Chr1:84920713-84920732 MsG0180004954.01.T01:intron 20.0%
! AAAAAAATCATAATCAAGCC+AGG - Chr1:84918192-84918211 None:intergenic 25.0%
! AAAAAACTAGGAGACTAAAA+TGG - Chr1:84918287-84918306 None:intergenic 25.0%
! AAAGTTATTGATATGAGAGA+TGG - Chr1:84922179-84922198 None:intergenic 25.0%
! AACTAAACATAAACACAGAT+AGG - Chr1:84917075-84917094 None:intergenic 25.0%
! AAGAACGATTTCAAAAGATA+TGG - Chr1:84918413-84918432 None:intergenic 25.0%
! AAGACCATTGTTTATGAAAA+TGG + Chr1:84923594-84923613 MsG0180004954.01.T01:three_prime_UTR 25.0%
! AAGTTATTTGATACAAGAGA+TGG - Chr1:84922264-84922283 None:intergenic 25.0%
! AATATAACAAGCATTCTACA+TGG - Chr1:84917572-84917591 None:intergenic 25.0%
! AATCTTTCAAGATATGCAAA+TGG - Chr1:84916866-84916885 None:intergenic 25.0%
! AGAACGATTTCAAAAAAACT+AGG - Chr1:84918299-84918318 None:intergenic 25.0%
! AGAATGGAATGAAATTGATA+TGG - Chr1:84918523-84918542 None:intergenic 25.0%
! ATACAAAATTTGATTGAACC+GGG - Chr1:84923307-84923326 None:intergenic 25.0%
! ATGTAGCTAAACATATGAAA+TGG - Chr1:84921633-84921652 None:intergenic 25.0%
! ATTATTTAGGAGTAAATGGA+AGG - Chr1:84920633-84920652 None:intergenic 25.0%
! CAGTTTACAAGGAAATAATT+TGG + Chr1:84920227-84920246 MsG0180004954.01.T01:CDS 25.0%
! CATAAATCAAAGACTAAGAA+TGG - Chr1:84918539-84918558 None:intergenic 25.0%
! CCATATTCTTAGTATTATCA+TGG + Chr1:84918951-84918970 MsG0180004954.01.T01:intron 25.0%
! CCATGATAATACTAAGAATA+TGG - Chr1:84918954-84918973 None:intergenic 25.0%
! CTTGTAACTAAAATGTGTAA+TGG - Chr1:84918892-84918911 None:intergenic 25.0%
! GAAACTAACAAAGACATTTA+AGG - Chr1:84917696-84917715 None:intergenic 25.0%
! GAGAAGAATTAAGCTAAAAA+TGG - Chr1:84917613-84917632 None:intergenic 25.0%
! GATAATAATATAGGATCTGT+TGG + Chr1:84919794-84919813 MsG0180004954.01.T01:intron 25.0%
! GCCAAATTTGAATATACTAT+TGG - Chr1:84922096-84922115 None:intergenic 25.0%
! GTATCATAATGTTCATGTAT+TGG + Chr1:84919539-84919558 MsG0180004954.01.T01:intron 25.0%
! GTGAGATATCAATAATAACA+CGG - Chr1:84917843-84917862 None:intergenic 25.0%
! GTTCTTAGATATTTATTTGG+TGG + Chr1:84920681-84920700 MsG0180004954.01.T01:intron 25.0%
! TAATAATGATCAGATGAGTA+TGG + Chr1:84923211-84923230 MsG0180004954.01.T01:three_prime_UTR 25.0%
! TCAAATTAATTGTTCTGACT+CGG + Chr1:84917945-84917964 MsG0180004954.01.T01:CDS 25.0%
! TCAATTTCACATAGAGATAA+GGG + Chr1:84920294-84920313 MsG0180004954.01.T01:CDS 25.0%
! TCTAATCTTCTATATTCCAA+AGG + Chr1:84919842-84919861 MsG0180004954.01.T01:intron 25.0%
! TGCTTCACTCATAATTATTT+AGG - Chr1:84920646-84920665 None:intergenic 25.0%
! TTAATTGCATGTTTCATGAT+GGG + Chr1:84917723-84917742 MsG0180004954.01.T01:intron 25.0%
! TTACAAGGAAATAATTTGGA+TGG + Chr1:84920231-84920250 MsG0180004954.01.T01:CDS 25.0%
! TTGTAACATTACCAGAATTA+GGG + Chr1:84923908-84923927 MsG0180004954.01.T01:three_prime_UTR 25.0%
! TTTAATTGCATGTTTCATGA+TGG + Chr1:84917722-84917741 MsG0180004954.01.T01:intron 25.0%
!! AAAAATACGGATTTTCTGTT+AGG + Chr1:84922019-84922038 MsG0180004954.01.T01:CDS 25.0%
!! AAAATACGGATTTTCTGTTA+GGG + Chr1:84922020-84922039 MsG0180004954.01.T01:CDS 25.0%
!! ATAGAAGATTAGACTTTTGA+CGG - Chr1:84919835-84919854 None:intergenic 25.0%
!! CATTCTTAGTCTTTGATTTA+TGG + Chr1:84918537-84918556 MsG0180004954.01.T01:intron 25.0%
!! GGTTCAATCAAATTTTGTAT+TGG + Chr1:84923307-84923326 MsG0180004954.01.T01:three_prime_UTR 25.0%
!! TGGTTGGAATTGATAATTAA+GGG + Chr1:84917096-84917115 MsG0180004954.01.T01:intron 25.0%
!!! ATGTAGAATGCTTGTTATAT+TGG + Chr1:84917571-84917590 MsG0180004954.01.T01:intron 25.0%
!!! CATTACACATTTTAGTTACA+AGG + Chr1:84918890-84918909 MsG0180004954.01.T01:intron 25.0%
!!! GGTTTATTTTCCTATGTAAT+GGG + Chr1:84918972-84918991 MsG0180004954.01.T01:intron 25.0%
!!! TGAATATTGGTTGATAAGAT+TGG - Chr1:84919053-84919072 None:intergenic 25.0%
!!! TGGATTAGGAATAATGTTTT+TGG + Chr1:84918040-84918059 MsG0180004954.01.T01:intron 25.0%
!!! TGGTTTATTTTCCTATGTAA+TGG + Chr1:84918971-84918990 MsG0180004954.01.T01:intron 25.0%
!!! TGTTTTCTCTTATTTTCACA+GGG + Chr1:84919747-84919766 MsG0180004954.01.T01:intron 25.0%
AAACATTATTCCTAATCCAC+AGG - Chr1:84918039-84918058 None:intergenic 30.0%
AAAGTTTGTGAATCTGATAG+TGG + Chr1:84921980-84921999 MsG0180004954.01.T01:CDS 30.0%
AACAACTTCCCTTTCAAATT+CGG + Chr1:84922430-84922449 MsG0180004954.01.T01:three_prime_UTR 30.0%
AATAATTTGGATGGCACATT+TGG + Chr1:84920240-84920259 MsG0180004954.01.T01:CDS 30.0%
AATATTACCTTCTGGACAAA+AGG + Chr1:84918714-84918733 MsG0180004954.01.T01:intron 30.0%
AATGTTACAACTTACAAGTG+AGG - Chr1:84923898-84923917 None:intergenic 30.0%
ATATGTCTCTCTAATTCTAC+AGG + Chr1:84919574-84919593 MsG0180004954.01.T01:intron 30.0%
ATCTACACTATCAAAGTTTG+AGG - Chr1:84921778-84921797 None:intergenic 30.0%
ATGAAATTGATATGGACATC+AGG - Chr1:84918515-84918534 None:intergenic 30.0%
ATTAAAGAATTCTCTGGACT+GGG + Chr1:84920779-84920798 MsG0180004954.01.T01:intron 30.0%
ATTAAGCTGTAAAGAAACTG+AGG - Chr1:84916972-84916991 None:intergenic 30.0%
ATTTGATACAAGAGATGGAA+CGG - Chr1:84922259-84922278 None:intergenic 30.0%
CAGATCTGCAATTTATAGTA+TGG + Chr1:84919448-84919467 MsG0180004954.01.T01:intron 30.0%
CTCATCTGATCATTATTAAC+TGG - Chr1:84923209-84923228 None:intergenic 30.0%
GAAAGGAAGAAGAAAATGAA+GGG - Chr1:84922157-84922176 None:intergenic 30.0%
GAGAAAAATCATCTGAATCA+AGG + Chr1:84920101-84920120 MsG0180004954.01.T01:intron 30.0%
GCAAAATTTACTACAGTGTA+TGG + Chr1:84916997-84917016 MsG0180004954.01.T01:intron 30.0%
GTAAGACAGATATTTCTTCT+GGG + Chr1:84922782-84922801 MsG0180004954.01.T01:three_prime_UTR 30.0%
GTCAATTTCACATAGAGATA+AGG + Chr1:84920293-84920312 MsG0180004954.01.T01:CDS 30.0%
GTTGGATAAATTCTGGTATA+CGG - Chr1:84919482-84919501 None:intergenic 30.0%
GTTGTAACATTACCAGAATT+AGG + Chr1:84923907-84923926 MsG0180004954.01.T01:three_prime_UTR 30.0%
TAAAGCGTAGAAATTTAGCA+TGG + Chr1:84919772-84919791 MsG0180004954.01.T01:intron 30.0%
TACAAAATTTGATTGAACCG+GGG - Chr1:84923306-84923325 None:intergenic 30.0%
TAGAATTAGAGAGACATATC+AGG - Chr1:84919573-84919592 None:intergenic 30.0%
TAGCTACATATACCTTTACT+TGG + Chr1:84921644-84921663 MsG0180004954.01.T01:intron 30.0%
TATGTCTCTCTAATTCTACA+GGG + Chr1:84919575-84919594 MsG0180004954.01.T01:intron 30.0%
TATTAAAGAATTCTCTGGAC+TGG + Chr1:84920778-84920797 MsG0180004954.01.T01:intron 30.0%
TATTGATATGAGAGATGGAA+AGG - Chr1:84922174-84922193 None:intergenic 30.0%
TCAATGCAATCTTAGAAACT+GGG - Chr1:84917440-84917459 None:intergenic 30.0%
TCCAGAGAATTCTTTAATAG+AGG - Chr1:84920777-84920796 None:intergenic 30.0%
TCCTCTATTAAAGAATTCTC+TGG + Chr1:84920773-84920792 MsG0180004954.01.T01:intron 30.0%
TCGACTCAATTACACAAAAT+CGG - Chr1:84917212-84917231 None:intergenic 30.0%
TCTGTGTTTATGTTTAGTTG+TGG + Chr1:84917076-84917095 MsG0180004954.01.T01:intron 30.0%
TGAAAGTTCAAACCAAGTAA+AGG - Chr1:84921659-84921678 None:intergenic 30.0%
TGTAACATTACCAGAATTAG+GGG + Chr1:84923909-84923928 MsG0180004954.01.T01:three_prime_UTR 30.0%
TGTTTATGTTTAGTTGTGGT+TGG + Chr1:84917080-84917099 MsG0180004954.01.T01:intron 30.0%
TTAACTTTATCTAGCAGAAC+AGG - Chr1:84919961-84919980 None:intergenic 30.0%
TTATTTCCTTGTAAACTGTC+CGG - Chr1:84920225-84920244 None:intergenic 30.0%
TTTCAAAAGATATGGACATC+AGG - Chr1:84918405-84918424 None:intergenic 30.0%
TTTCAATTCGGTACAACATT+TGG + Chr1:84922893-84922912 MsG0180004954.01.T01:three_prime_UTR 30.0%
! AACTTTTACATCCACAATGT+AGG - Chr1:84917672-84917691 None:intergenic 30.0%
! AGACCAAAAGTTGTTATTGT+AGG - Chr1:84921038-84921057 None:intergenic 30.0%
! ATATGTGGTTTTTATGATGC+AGG + Chr1:84916717-84916736 MsG0180004954.01.T01:CDS 30.0%
! ATTGCAGAATTGGCTTAATT+TGG + Chr1:84917516-84917535 MsG0180004954.01.T01:intron 30.0%
! CAATGGTCTTTTACTTCTTA+CGG - Chr1:84923584-84923603 None:intergenic 30.0%
! GATTCAGATGATTTTTCTCT+GGG - Chr1:84920100-84920119 None:intergenic 30.0%
! GCAACCATTTTCATAAACAA+TGG - Chr1:84923601-84923620 None:intergenic 30.0%
! GGTTGATTGTGTATATGTTT+TGG + Chr1:84918581-84918600 MsG0180004954.01.T01:intron 30.0%
! GTGGTTGGAATTGATAATTA+AGG + Chr1:84917095-84917114 MsG0180004954.01.T01:intron 30.0%
! TACCACTAACGTTTTCAATT+CGG + Chr1:84922881-84922900 MsG0180004954.01.T01:three_prime_UTR 30.0%
! TATGTGGTTTTTATGATGCA+GGG + Chr1:84916718-84916737 MsG0180004954.01.T01:CDS 30.0%
! TGATTCAGATGATTTTTCTC+TGG - Chr1:84920101-84920120 None:intergenic 30.0%
! TGATTTATGGTGTACCTTTT+GGG + Chr1:84918550-84918569 MsG0180004954.01.T01:intron 30.0%
! TTGATTTATGGTGTACCTTT+TGG + Chr1:84918549-84918568 MsG0180004954.01.T01:intron 30.0%
! TTTACTTGGTTTGAACTTTC+AGG + Chr1:84921658-84921677 MsG0180004954.01.T01:intron 30.0%
! TTTTGTCCAGAAGGTAATAT+TGG - Chr1:84918715-84918734 None:intergenic 30.0%
!! AATCAAAATAATGGGTCTCT+TGG + Chr1:84922125-84922144 MsG0180004954.01.T01:three_prime_UTR 30.0%
!! TCAAAAGAAGCACCAAATTT+CGG - Chr1:84921322-84921341 None:intergenic 30.0%
!!! ACATCTAGACTGTGTTTTTT+GGG + Chr1:84921422-84921441 MsG0180004954.01.T01:intron 30.0%
!!! AGGTATCTTATTAGCTTTTG+TGG + Chr1:84919724-84919743 MsG0180004954.01.T01:intron 30.0%
!!! GGAGATTTTTCACTTTTTAG+AGG - Chr1:84919338-84919357 None:intergenic 30.0%
!!! GTGTTTTCTCTTATTTTCAC+AGG + Chr1:84919746-84919765 MsG0180004954.01.T01:intron 30.0%
!!! GTTTTCTCTTATTTTCACAG+GGG + Chr1:84919748-84919767 MsG0180004954.01.T01:intron 30.0%
AACCTTCTCCAAACAAATAC+TGG - Chr1:84921186-84921205 None:intergenic 35.0%
AACTTGCATGAAACTGCAAA+CGG - Chr1:84920554-84920573 None:intergenic 35.0%
AACTTTGTCCGCAATAACAA+TGG - Chr1:84920860-84920879 None:intergenic 35.0%
AAGAGAACAATCATGATCTG+AGG - Chr1:84920743-84920762 None:intergenic 35.0%
AATACCACAGATGATGTTGA+GGG - Chr1:84920915-84920934 None:intergenic 35.0%
AATCAGCTCCAGTATTTGTT+TGG + Chr1:84921175-84921194 MsG0180004954.01.T01:intron 35.0%
AATGTATCCTCATCAATGCT+AGG + Chr1:84919278-84919297 MsG0180004954.01.T01:CDS 35.0%
ACACCAAGCAAAATGTTTCA+AGG + Chr1:84921246-84921265 MsG0180004954.01.T01:intron 35.0%
ACCTGTATTATCTGAAAGAC+AGG - Chr1:84919708-84919727 None:intergenic 35.0%
AGAAGAGGTTGGATAAATTC+TGG - Chr1:84919489-84919508 None:intergenic 35.0%
AGCTAATGTTAAGACATCTG+TGG + Chr1:84920992-84921011 MsG0180004954.01.T01:intron 35.0%
AGGAAAGAACCGAATTTGAA+AGG - Chr1:84922442-84922461 None:intergenic 35.0%
AGTTATCACCTTCAATGCTA+CGG + Chr1:84920155-84920174 MsG0180004954.01.T01:intron 35.0%
ATAACAAGCTACTAGATCGT+GGG - Chr1:84917491-84917510 None:intergenic 35.0%
ATAACTTCATCCCCTAATTC+TGG - Chr1:84923922-84923941 None:intergenic 35.0%
ATCAGCATATCGAAACTTGT+TGG + Chr1:84923737-84923756 MsG0180004954.01.T01:three_prime_UTR 35.0%
ATGTCTCTCTAATTCTACAG+GGG + Chr1:84919576-84919595 MsG0180004954.01.T01:intron 35.0%
ATTCATATCACGATCCGATT+TGG - Chr1:84917345-84917364 None:intergenic 35.0%
CAAAATTGGGAACATATCGA+AGG - Chr1:84923773-84923792 None:intergenic 35.0%
CAAAGGTGATGAACTAAATG+AGG - Chr1:84923022-84923041 None:intergenic 35.0%
CAATCTTAGAAACTGGGTTT+GGG - Chr1:84917434-84917453 None:intergenic 35.0%
CACACTGCAATTCATGAAAA+CGG + Chr1:84919402-84919421 MsG0180004954.01.T01:intron 35.0%
CTCAATGCAATCTTAGAAAC+TGG - Chr1:84917441-84917460 None:intergenic 35.0%
CTGCAATGTTACCTATTGAT+TGG + Chr1:84917812-84917831 MsG0180004954.01.T01:intron 35.0%
GAACCAAATAGAGAATTGCT+GGG - Chr1:84923000-84923019 None:intergenic 35.0%
GAAGAAGCAACAAGTTTCAA+TGG - Chr1:84920330-84920349 None:intergenic 35.0%
GATGAAGTTATAAGCTTAGC+TGG + Chr1:84923931-84923950 MsG0180004954.01.T01:three_prime_UTR 35.0%
GATTACTTCGTAATGTCCAT+AGG + Chr1:84919190-84919209 MsG0180004954.01.T01:intron 35.0%
GGAAAGAACCGAATTTGAAA+GGG - Chr1:84922441-84922460 None:intergenic 35.0%
GGAAAGGAAGAAGAAAATGA+AGG - Chr1:84922158-84922177 None:intergenic 35.0%
GGTAAGACAGATATTTCTTC+TGG + Chr1:84922781-84922800 MsG0180004954.01.T01:three_prime_UTR 35.0%
GGTTTATCTGTATCATCTTC+TGG + Chr1:84922474-84922493 MsG0180004954.01.T01:three_prime_UTR 35.0%
GTATAACATCTCTTGTTACG+AGG + Chr1:84921493-84921512 MsG0180004954.01.T01:intron 35.0%
GTTATGTTGGATTGCAGAAT+TGG + Chr1:84917506-84917525 MsG0180004954.01.T01:intron 35.0%
TAATGATCAGATGAGTATGG+TGG + Chr1:84923214-84923233 MsG0180004954.01.T01:three_prime_UTR 35.0%
TACCGAATTGAAAACGTTAG+TGG - Chr1:84922886-84922905 None:intergenic 35.0%
TACCGTCTTCAGTCTTTATT+GGG + Chr1:84921718-84921737 MsG0180004954.01.T01:intron 35.0%
TCAACCAAAAACATCCCAAA+AGG - Chr1:84918567-84918586 None:intergenic 35.0%
TCAGAACCAATATTACCTTC+TGG + Chr1:84918706-84918725 MsG0180004954.01.T01:intron 35.0%
TCCTGTCTTTCAGATAATAC+AGG + Chr1:84919704-84919723 MsG0180004954.01.T01:intron 35.0%
TCGACATAATAGGGGATTTA+CGG - Chr1:84919359-84919378 None:intergenic 35.0%
TGCTGGGACTGATAAAAATA+CGG + Chr1:84922006-84922025 MsG0180004954.01.T01:CDS 35.0%
TTACCGTCTTCAGTCTTTAT+TGG + Chr1:84921717-84921736 MsG0180004954.01.T01:intron 35.0%
TTAGACCCAATTCCCTTAAA+TGG + Chr1:84921541-84921560 MsG0180004954.01.T01:intron 35.0%
TTGGCACAATCGACATAATA+GGG - Chr1:84919368-84919387 None:intergenic 35.0%
TTTACTGCATCATCATCAGT+TGG + Chr1:84921283-84921302 MsG0180004954.01.T01:intron 35.0%
! AAATTTTGTAGCCATCTCAC+TGG - Chr1:84920051-84920070 None:intergenic 35.0%
! AACTTCTGTTGCTTCATCAA+AGG + Chr1:84921144-84921163 MsG0180004954.01.T01:intron 35.0%
! ACTGATGATGATGCAGTAAA+TGG - Chr1:84921283-84921302 None:intergenic 35.0%
! CTGATGATGATGCAGTAAAT+GGG - Chr1:84921282-84921301 None:intergenic 35.0%
! GAACCTTGAAACATTTTGCT+TGG - Chr1:84921252-84921271 None:intergenic 35.0%
! GAGTAGAAGTGTAAATACAC+CGG - Chr1:84922711-84922730 None:intergenic 35.0%
! GCACCTACAATAACAACTTT+TGG + Chr1:84921032-84921051 MsG0180004954.01.T01:CDS 35.0%
! GTTTTCAGTCCCATTTTCTA+CGG - Chr1:84918761-84918780 None:intergenic 35.0%
! TACAATAGGAACCGATTCAT+TGG - Chr1:84920352-84920371 None:intergenic 35.0%
! TATTATGTCGATTGTGCCAA+GGG + Chr1:84919368-84919387 MsG0180004954.01.T01:intron 35.0%
! TATTCTTCCTTTTGTCCAGA+AGG - Chr1:84918724-84918743 None:intergenic 35.0%
! TCTGTTCAAGTTTGATCGTA+TGG - Chr1:84921848-84921867 None:intergenic 35.0%
! TGGCTTAATTTGGATTGTGA+TGG + Chr1:84917526-84917545 MsG0180004954.01.T01:intron 35.0%
! TGTTGCTTCTTCCAATGAAT+CGG + Chr1:84920338-84920357 MsG0180004954.01.T01:CDS 35.0%
! TGTTTTGTATCCTGTGGATT+AGG + Chr1:84918026-84918045 MsG0180004954.01.T01:intron 35.0%
! TTTAGTTCATCACCTTTGTC+CGG + Chr1:84923024-84923043 MsG0180004954.01.T01:three_prime_UTR 35.0%
!! AAAAAGCGCCATTGTTATTG+CGG + Chr1:84920849-84920868 MsG0180004954.01.T01:CDS 35.0%
!! GATCTAGTAGCTTGTTATGT+TGG + Chr1:84917493-84917512 MsG0180004954.01.T01:intron 35.0%
!! GGGAAAGTTTTGTGTTTTTG+GGG + Chr1:84921569-84921588 MsG0180004954.01.T01:intron 35.0%
!! GGGGAAAGTTTTGTGTTTTT+GGG + Chr1:84921568-84921587 MsG0180004954.01.T01:intron 35.0%
!! TAGCATTGATGAGGATACAT+TGG - Chr1:84919279-84919298 None:intergenic 35.0%
!! TTGGTGTCAAAGTTTACTGA+TGG - Chr1:84921233-84921252 None:intergenic 35.0%
!! TTTTCCTATGTAATGGGACT+TGG + Chr1:84918978-84918997 MsG0180004954.01.T01:intron 35.0%
!!! CACATCTAGACTGTGTTTTT+TGG + Chr1:84921421-84921440 MsG0180004954.01.T01:intron 35.0%
!!! CTCACTTTTATTTTTCCCGT+AGG + Chr1:84917630-84917649 MsG0180004954.01.T01:intron 35.0%
!!! GGAAAGTTTTGTGTTTTTGG+GGG + Chr1:84921570-84921589 MsG0180004954.01.T01:intron 35.0%
!!! TATGTTTTGGTCCATACAAC+AGG + Chr1:84918594-84918613 MsG0180004954.01.T01:intron 35.0%
!!! TATTGCGCTGATTCTGATTT+TGG + Chr1:84918257-84918276 MsG0180004954.01.T01:intron 35.0%
!!! TGTACCTTTTGGGATGTTTT+TGG + Chr1:84918560-84918579 MsG0180004954.01.T01:intron 35.0%
AAAACACCCACCGTAGAAAA+TGG + Chr1:84918748-84918767 MsG0180004954.01.T01:intron 40.0%
AAACACCCACCGTAGAAAAT+GGG + Chr1:84918749-84918768 MsG0180004954.01.T01:intron 40.0%
AAATTGCCGGACAGTTTACA+AGG + Chr1:84920216-84920235 MsG0180004954.01.T01:CDS 40.0%
AAGATATGGACATCAGGAAG+AGG - Chr1:84918399-84918418 None:intergenic 40.0%
AATTCCCTTAAATGGTTGCG+GGG + Chr1:84921549-84921568 MsG0180004954.01.T01:intron 40.0%
AATTTAATGCAGGAGGAGGA+GGG + Chr1:84923491-84923510 MsG0180004954.01.T01:three_prime_UTR 40.0%
ACAAGCCTGCTTTACCAAAT+GGG + Chr1:84921059-84921078 MsG0180004954.01.T01:CDS 40.0%
ACACGGTTTCACCAATCAAT+AGG - Chr1:84917826-84917845 None:intergenic 40.0%
ACATCCTCAATAGGAACCTA+TGG - Chr1:84919209-84919228 None:intergenic 40.0%
ACCGTCTTCAGTCTTTATTG+GGG + Chr1:84921719-84921738 MsG0180004954.01.T01:intron 40.0%
ACGAAGTAATCCATGTGAGA+TGG - Chr1:84919181-84919200 None:intergenic 40.0%
ACGTTAGTGGTAGAACTTGA+AGG - Chr1:84922873-84922892 None:intergenic 40.0%
AGAAGAGAAGAGGTCAGAAA+TGG + Chr1:84918678-84918697 MsG0180004954.01.T01:intron 40.0%
AGAGCTTGCAAAAGCTTACA+TGG + Chr1:84919241-84919260 MsG0180004954.01.T01:CDS 40.0%
AGAGTCTATTCTAGATCCGT+TGG + Chr1:84917259-84917278 MsG0180004954.01.T01:intron 40.0%
AGCCAGTCTCAGAGTTATTT+CGG + Chr1:84922641-84922660 MsG0180004954.01.T01:three_prime_UTR 40.0%
AGCTTGCAAAAGCTTACATG+GGG + Chr1:84919243-84919262 MsG0180004954.01.T01:CDS 40.0%
AGTTGTCATGCTAATTCCAG+TGG - Chr1:84922343-84922362 None:intergenic 40.0%
AGTTGTTCAAATAGCATGCC+TGG + Chr1:84918171-84918190 MsG0180004954.01.T01:intron 40.0%
ATATTCAGCAGATCGCTCAT+TGG - Chr1:84923974-84923993 None:intergenic 40.0%
ATCTGTCTATAGGAACGGAT+TGG + Chr1:84919894-84919913 MsG0180004954.01.T01:CDS 40.0%
ATGCAGATGATTGAACTGAC+TGG - Chr1:84922738-84922757 None:intergenic 40.0%
ATGTCCATAGGTTCCTATTG+AGG + Chr1:84919202-84919221 MsG0180004954.01.T01:intron 40.0%
ATTGCGGACAAAGTTTCTTC+TGG + Chr1:84920865-84920884 MsG0180004954.01.T01:CDS 40.0%
CAAAAGCAAAGACAGGGTTA+GGG - Chr1:84923178-84923197 None:intergenic 40.0%
CAACCCAGCAATTCTCTATT+TGG + Chr1:84922994-84923013 MsG0180004954.01.T01:three_prime_UTR 40.0%
CAATACCACAGATGATGTTG+AGG - Chr1:84920916-84920935 None:intergenic 40.0%
CAATTCCCTTAAATGGTTGC+GGG + Chr1:84921548-84921567 MsG0180004954.01.T01:intron 40.0%
CAGGTTGCAAAAGAATCTTC+TGG + Chr1:84917889-84917908 MsG0180004954.01.T01:intron 40.0%
CATAACAAGCTACTAGATCG+TGG - Chr1:84917492-84917511 None:intergenic 40.0%
CATGTTAAGACAACTGATGG+TGG + Chr1:84920969-84920988 MsG0180004954.01.T01:intron 40.0%
CCAATTCCCTTAAATGGTTG+CGG + Chr1:84921547-84921566 MsG0180004954.01.T01:intron 40.0%
CGCAACCATTTAAGGGAATT+GGG - Chr1:84921549-84921568 None:intergenic 40.0%
CTCCAGTATTTGTTTGGAGA+AGG + Chr1:84921181-84921200 MsG0180004954.01.T01:intron 40.0%
CTGAACCAAAAGCAAAGACA+GGG - Chr1:84923184-84923203 None:intergenic 40.0%
CTTGGCACAATCGACATAAT+AGG - Chr1:84919369-84919388 None:intergenic 40.0%
GAACGGAAGAAGAGAATGAA+GGG - Chr1:84922242-84922261 None:intergenic 40.0%
GACTTGATTGCTTGACTTTG+TGG - Chr1:84920388-84920407 None:intergenic 40.0%
GAGCTTGCAAAAGCTTACAT+GGG + Chr1:84919242-84919261 MsG0180004954.01.T01:CDS 40.0%
GAGTCTATTCTAGATCCGTT+GGG + Chr1:84917260-84917279 MsG0180004954.01.T01:intron 40.0%
GATGAACTATCACTCACAAC+TGG - Chr1:84920130-84920149 None:intergenic 40.0%
GATGATGCAGTAAATGGGAT+TGG - Chr1:84921277-84921296 None:intergenic 40.0%
GATGGAACAAGAAATGAGAC+AGG + Chr1:84916788-84916807 MsG0180004954.01.T01:CDS 40.0%
GCAATCTTAGAAACTGGGTT+TGG - Chr1:84917435-84917454 None:intergenic 40.0%
GCCAAATGAGCAACACTATA+AGG - Chr1:84923691-84923710 None:intergenic 40.0%
GCTCATGTTAAGACAACTGA+TGG + Chr1:84920966-84920985 MsG0180004954.01.T01:intron 40.0%
GCTCTATCTGTCTATAGGAA+CGG + Chr1:84919889-84919908 MsG0180004954.01.T01:CDS 40.0%
GCTGAAGTGAATGAAAACTG+AGG - Chr1:84923120-84923139 None:intergenic 40.0%
GCTGTACTTGTAGTGATTCT+AGG + Chr1:84923821-84923840 MsG0180004954.01.T01:three_prime_UTR 40.0%
GGAACCAAATAGAGAATTGC+TGG - Chr1:84923001-84923020 None:intergenic 40.0%
GTCTCTGTAGTGGTTACAAT+AGG - Chr1:84920366-84920385 None:intergenic 40.0%
GTGTGGTAAGAGTTCCAAAT+CGG + Chr1:84917328-84917347 MsG0180004954.01.T01:intron 40.0%
GTTATCACCTTCAATGCTAC+GGG + Chr1:84920156-84920175 MsG0180004954.01.T01:intron 40.0%
GTTGGAACAAGAAATGAGAC+AGG + Chr1:84916740-84916759 MsG0180004954.01.T01:CDS 40.0%
TAAGGCAAGTTCACATACAC+TGG - Chr1:84918812-84918831 None:intergenic 40.0%
TAAGTAGTACGCATATGGCT+TGG + Chr1:84917166-84917185 MsG0180004954.01.T01:intron 40.0%
TAGTTTAGCAGCACTGCATT+TGG + Chr1:84922542-84922561 MsG0180004954.01.T01:three_prime_UTR 40.0%
TCAACAGAACATTGCTTCAC+AGG + Chr1:84923372-84923391 MsG0180004954.01.T01:three_prime_UTR 40.0%
TCAAGAAGAAGCTGTAGAGA+TGG + Chr1:84916770-84916789 MsG0180004954.01.T01:CDS 40.0%
TCAATCTCAGACCTGTTGTA+TGG - Chr1:84918608-84918627 None:intergenic 40.0%
TCACATACACTGGAAGTAAC+AGG - Chr1:84918802-84918821 None:intergenic 40.0%
TCATTTCCCATACGAGAAAC+AGG + Chr1:84917870-84917889 MsG0180004954.01.T01:intron 40.0%
TGAAGAGCTGAACCCAAAAA+TGG - Chr1:84922603-84922622 None:intergenic 40.0%
TGAAGCATAAGACTTTCACC+AGG + Chr1:84918001-84918020 MsG0180004954.01.T01:CDS 40.0%
TGAATGAAAACTGAGGACTG+AGG - Chr1:84923113-84923132 None:intergenic 40.0%
TGCAGATGATTGAACTGACT+GGG - Chr1:84922737-84922756 None:intergenic 40.0%
TGGCACAATCGACATAATAG+GGG - Chr1:84919367-84919386 None:intergenic 40.0%
TGGCTTAAGTAGTACGCATA+TGG + Chr1:84917161-84917180 MsG0180004954.01.T01:intron 40.0%
TGTCTCTCTAATTCTACAGG+GGG + Chr1:84919577-84919596 MsG0180004954.01.T01:intron 40.0%
TTAGTTCATCACCTTTGTCC+GGG + Chr1:84923025-84923044 MsG0180004954.01.T01:three_prime_UTR 40.0%
TTATACCCCTTGTGTAGATC+CGG - Chr1:84919666-84919685 None:intergenic 40.0%
TTATCCAACCTCTTCTCTCA+AGG + Chr1:84919493-84919512 MsG0180004954.01.T01:intron 40.0%
TTCGGTACAACATTTGGACT+CGG + Chr1:84922899-84922918 MsG0180004954.01.T01:three_prime_UTR 40.0%
TTTCCGCAGAAGAAAAGAGA+CGG - Chr1:84920822-84920841 None:intergenic 40.0%
! AATGCTCGCTTCTTTTGTGT+AGG - Chr1:84920453-84920472 None:intergenic 40.0%
! AGTCTGGAATTTAATGCAGG+AGG + Chr1:84923484-84923503 MsG0180004954.01.T01:three_prime_UTR 40.0%
! AGTTCCACTCACGTTTTCTT+CGG - Chr1:84919992-84920011 None:intergenic 40.0%
! ATGCTCGCTTCTTTTGTGTA+GGG - Chr1:84920452-84920471 None:intergenic 40.0%
! ATTTTCTACGGTGGGTGTTT+TGG - Chr1:84918749-84918768 None:intergenic 40.0%
! CAGGTTGAGTTAATGCAAGA+TGG - Chr1:84918783-84918802 None:intergenic 40.0%
! CTATTATGTCGATTGTGCCA+AGG + Chr1:84919367-84919386 MsG0180004954.01.T01:intron 40.0%
! GAACAATCATGATCTGAGGT+TGG - Chr1:84920739-84920758 None:intergenic 40.0%
! GCCTTATAGTGTTGCTCATT+TGG + Chr1:84923687-84923706 MsG0180004954.01.T01:three_prime_UTR 40.0%
! TAAGCTTTTGCAAGCTCTAC+AGG - Chr1:84919239-84919258 None:intergenic 40.0%
! TCTGTCTATAGGAACGGATT+GGG + Chr1:84919895-84919914 MsG0180004954.01.T01:CDS 40.0%
! TGGTTTTTATGATGCAGGGT+TGG + Chr1:84916722-84916741 MsG0180004954.01.T01:CDS 40.0%
! TGTTCTGTTGACTAGCAAAC+TGG - Chr1:84923426-84923445 None:intergenic 40.0%
! TGTTGACTAGCAAACTGGAA+AGG - Chr1:84923421-84923440 None:intergenic 40.0%
! TTGCAACCTGTTTCTCGTAT+GGG - Chr1:84917879-84917898 None:intergenic 40.0%
! TTTGCAACCTGTTTCTCGTA+TGG - Chr1:84917880-84917899 None:intergenic 40.0%
! TTTTCTACGGTGGGTGTTTT+GGG - Chr1:84918748-84918767 None:intergenic 40.0%
!! AAAGCTGGCTTGTAAGGTAA+GGG - Chr1:84917395-84917414 None:intergenic 40.0%
!! AAATAATGGGTCCTTGCTTC+AGG + Chr1:84922216-84922235 MsG0180004954.01.T01:three_prime_UTR 40.0%
!! AATAATGGGTCTCTTGGTTC+AGG + Chr1:84922131-84922150 MsG0180004954.01.T01:three_prime_UTR 40.0%
!! AATCTGATAGTGGTGATGCT+GGG + Chr1:84921990-84922009 MsG0180004954.01.T01:CDS 40.0%
!! AATTGTTCTGACTCGGATCA+AGG + Chr1:84917952-84917971 MsG0180004954.01.T01:CDS 40.0%
!! ATTGTTCTGACTCGGATCAA+GGG + Chr1:84917953-84917972 MsG0180004954.01.T01:CDS 40.0%
!! CGGGGAAAGTTTTGTGTTTT+TGG + Chr1:84921567-84921586 MsG0180004954.01.T01:intron 40.0%
!! TGTTCTGTTGACTTGCAAAC+TGG - Chr1:84923363-84923382 None:intergenic 40.0%
!! TGTTGACTTGCAAACTGGAA+AGG - Chr1:84923358-84923377 None:intergenic 40.0%
!!! GATTAGACTTTTGACGGACT+CGG - Chr1:84919829-84919848 None:intergenic 40.0%
AAATTTGATTGAACCGGGGC+AGG - Chr1:84923302-84923321 None:intergenic 45.0%
AACAGGCAAGATGCAGGAAT+CGG + Chr1:84922519-84922538 MsG0180004954.01.T01:three_prime_UTR 45.0%
AAGGCAAACCTTGAGAGAAG+AGG - Chr1:84919504-84919523 None:intergenic 45.0%
AAGTCCCTCAACATCATCTG+TGG + Chr1:84920908-84920927 MsG0180004954.01.T01:CDS 45.0%
AAGTCCGAAGAAAACGTGAG+TGG + Chr1:84919985-84920004 MsG0180004954.01.T01:intron 45.0%
AATGCCACCACTTGCAGAAA+GGG - Chr1:84922304-84922323 None:intergenic 45.0%
AATGGATCATGCCATGTCAC+CGG + Chr1:84919644-84919663 MsG0180004954.01.T01:CDS 45.0%
AATTCCAGTGGAAGCAGAAG+TGG - Chr1:84922331-84922350 None:intergenic 45.0%
ACAGAACCCTTCTCCATTTC+AGG + Chr1:84923453-84923472 MsG0180004954.01.T01:three_prime_UTR 45.0%
ACTAACCTGATTGATCCTCC+CGG - Chr1:84921352-84921371 None:intergenic 45.0%
ACTAGCAAACTGGAAAGGAC+TGG - Chr1:84923416-84923435 None:intergenic 45.0%
ACTGCATCATCATCAGTTGG+TGG + Chr1:84921286-84921305 MsG0180004954.01.T01:intron 45.0%
ACTTGCAAACTGGAAAGGAC+TGG - Chr1:84923353-84923372 None:intergenic 45.0%
ACTTTCCCCGCAACCATTTA+AGG - Chr1:84921557-84921576 None:intergenic 45.0%
AGCATCTATCGTAAACCCTG+TGG - Chr1:84920943-84920962 None:intergenic 45.0%
AGCCACATCTTCAGTCGATA+TGG - Chr1:84917146-84917165 None:intergenic 45.0%
AGCTCTTCATCAATGACAGC+TGG + Chr1:84922614-84922633 MsG0180004954.01.T01:three_prime_UTR 45.0%
AGGCTTATGCAAGGAAGATG+AGG - Chr1:84919941-84919960 None:intergenic 45.0%
AGTGTAAATACACCGGCAGA+AGG - Chr1:84922704-84922723 None:intergenic 45.0%
ATACCTCGTGTGCACTCATA+TGG - Chr1:84920476-84920495 None:intergenic 45.0%
ATGTCACCGGATCTACACAA+GGG + Chr1:84919657-84919676 MsG0180004954.01.T01:CDS 45.0%
ATTCCATATGAGTGCACACG+AGG + Chr1:84920470-84920489 MsG0180004954.01.T01:CDS 45.0%
CAAACCTTGAGAGAAGAGGT+TGG - Chr1:84919500-84919519 None:intergenic 45.0%
CACAGGATACAAAACATGCC+TGG - Chr1:84918022-84918041 None:intergenic 45.0%
CAGAAGCCTGAAATGGAGAA+GGG - Chr1:84923462-84923481 None:intergenic 45.0%
CCAAAAGCAAAGACAGGGTT+AGG - Chr1:84923179-84923198 None:intergenic 45.0%
CCGCAACCATTTAAGGGAAT+TGG - Chr1:84921550-84921569 None:intergenic 45.0%
CGTATGGCACATGTGACATA+TGG - Chr1:84921832-84921851 None:intergenic 45.0%
CTAACTCATCCTCACAAAGC+TGG - Chr1:84917410-84917429 None:intergenic 45.0%
CTCCTCAAAATCCAGTGAGA+TGG + Chr1:84920037-84920056 MsG0180004954.01.T01:intron 45.0%
CTGCATCATCCCCATTGTTT+GGG + Chr1:84922752-84922771 MsG0180004954.01.T01:three_prime_UTR 45.0%
CTGGAATTTAATGCAGGAGG+AGG + Chr1:84923487-84923506 MsG0180004954.01.T01:three_prime_UTR 45.0%
CTTTCCCCGCAACCATTTAA+GGG - Chr1:84921556-84921575 None:intergenic 45.0%
GAATTTAATGCAGGAGGAGG+AGG + Chr1:84923490-84923509 MsG0180004954.01.T01:three_prime_UTR 45.0%
GACAAGCCTGCTTTACCAAA+TGG + Chr1:84921058-84921077 MsG0180004954.01.T01:CDS 45.0%
GACTCCAAGTCCCATTACAT+AGG - Chr1:84918985-84919004 None:intergenic 45.0%
GACTGTAGATGCAGCTGTTA+GGG + Chr1:84918655-84918674 MsG0180004954.01.T01:intron 45.0%
GATAAACCTGCTGATGTGAC+AGG - Chr1:84922462-84922481 None:intergenic 45.0%
GATGCAGTAAATGGGATTGG+TGG - Chr1:84921274-84921293 None:intergenic 45.0%
GCAGGTTGTTGACCAAACAT+AGG - Chr1:84923284-84923303 None:intergenic 45.0%
GCAGTGCTCTATCTGTCTAT+AGG + Chr1:84919884-84919903 MsG0180004954.01.T01:intron 45.0%
GCCACATCTTCAGTCGATAT+GGG - Chr1:84917145-84917164 None:intergenic 45.0%
GCCCCAATAAAGACTGAAGA+CGG - Chr1:84921723-84921742 None:intergenic 45.0%
GCTCAAAACCACTGGAAACT+GGG + Chr1:84922496-84922515 MsG0180004954.01.T01:three_prime_UTR 45.0%
GCTGAACCAAAAGCAAAGAC+AGG - Chr1:84923185-84923204 None:intergenic 45.0%
GGAACGGAAGAAGAGAATGA+AGG - Chr1:84922243-84922262 None:intergenic 45.0%
GGCAATCAACAAAGAGCAGT+TGG + Chr1:84917910-84917929 MsG0180004954.01.T01:CDS 45.0%
GGCTTATGCAAGGAAGATGA+GGG - Chr1:84919940-84919959 None:intergenic 45.0%
GGTAGATGCGTCAAAATTGC+CGG + Chr1:84920203-84920222 MsG0180004954.01.T01:CDS 45.0%
GGTGAAGCAACATCCTCAAT+AGG - Chr1:84919218-84919237 None:intergenic 45.0%
GGTGAGTCTACTCCGAAATT+TGG + Chr1:84921307-84921326 MsG0180004954.01.T01:CDS 45.0%
GTTGACCCATTTGGTAAAGC+AGG - Chr1:84921067-84921086 None:intergenic 45.0%
TAAATTGCAGATCTGCCACG+AGG - Chr1:84919443-84919462 None:intergenic 45.0%
TAATGCCACCACTTGCAGAA+AGG - Chr1:84922305-84922324 None:intergenic 45.0%
TACCAGTCGACCCAAACAAT+GGG - Chr1:84922765-84922784 None:intergenic 45.0%
TAGCAGAACAGGCTTATGCA+AGG - Chr1:84919950-84919969 None:intergenic 45.0%
TCTATCGTAAACCCTGTGGA+TGG - Chr1:84920939-84920958 None:intergenic 45.0%
TCTGCATCATCCCCATTGTT+TGG + Chr1:84922751-84922770 MsG0180004954.01.T01:three_prime_UTR 45.0%
TGAAATGGAGAAGGGTTCTG+TGG - Chr1:84923454-84923473 None:intergenic 45.0%
TGAAGAGAATTGTGTTCGCG+AGG - Chr1:84921403-84921422 None:intergenic 45.0%
TGACAGCACTTATGCAGTCA+AGG + Chr1:84918633-84918652 MsG0180004954.01.T01:intron 45.0%
TGACTTCTGATTCTGAGCAC+TGG - Chr1:84920277-84920296 None:intergenic 45.0%
TGACTTTGTGGTCTCTGTAG+TGG - Chr1:84920376-84920395 None:intergenic 45.0%
TGCTTTCTATCACCTGCTTC+AGG + Chr1:84923618-84923637 MsG0180004954.01.T01:three_prime_UTR 45.0%
TGGAAGGAATCAAATGCCCA+TGG - Chr1:84920617-84920636 None:intergenic 45.0%
TTACCAGTCGACCCAAACAA+TGG - Chr1:84922766-84922785 None:intergenic 45.0%
TTACCCCACAACAACACCTA+CGG - Chr1:84917649-84917668 None:intergenic 45.0%
TTCTTTCCTGTCACATCAGC+AGG + Chr1:84922453-84922472 MsG0180004954.01.T01:three_prime_UTR 45.0%
TTGAGGGACTTTCATGTGCA+TGG - Chr1:84920899-84920918 None:intergenic 45.0%
TTGTGGGGTAACCTACATTG+TGG + Chr1:84917658-84917677 MsG0180004954.01.T01:intron 45.0%
TTTGTACTCCTGAGCGTGAA+GGG + Chr1:84917304-84917323 MsG0180004954.01.T01:intron 45.0%
TTTGTTGCGCTACTGAAGTG+CGG - Chr1:84923644-84923663 None:intergenic 45.0%
! AGATTCGACCTGTGGGTTAT+AGG + Chr1:84917465-84917484 MsG0180004954.01.T01:intron 45.0%
! AGCCATCTCACTGGATTTTG+AGG - Chr1:84920042-84920061 None:intergenic 45.0%
! ATTGGAGCATCCACTCATTC+AGG + Chr1:84923325-84923344 MsG0180004954.01.T01:three_prime_UTR 45.0%
! CAGGCATGTTTTGTATCCTG+TGG + Chr1:84918020-84918039 MsG0180004954.01.T01:intron 45.0%
! CCTAACCCTGTCTTTGCTTT+TGG + Chr1:84923176-84923195 MsG0180004954.01.T01:three_prime_UTR 45.0%
! CGGATTTTCTGTTAGGGCAT+CGG + Chr1:84922026-84922045 MsG0180004954.01.T01:CDS 45.0%
! GAAGGTTGATCCTTCAAAGG+AGG + Chr1:84921199-84921218 MsG0180004954.01.T01:intron 45.0%
! GCACAGGCTCTAGTTTATTG+GGG + Chr1:84922960-84922979 MsG0180004954.01.T01:three_prime_UTR 45.0%
! GGAGAAGGTTGATCCTTCAA+AGG + Chr1:84921196-84921215 MsG0180004954.01.T01:intron 45.0%
! GGATTAGCAGTTGACCCATT+TGG - Chr1:84921076-84921095 None:intergenic 45.0%
! GGCACAGGCTCTAGTTTATT+GGG + Chr1:84922959-84922978 MsG0180004954.01.T01:three_prime_UTR 45.0%
! GGCAGTCTGGAATTTAATGC+AGG + Chr1:84923481-84923500 MsG0180004954.01.T01:three_prime_UTR 45.0%
! GGGACTTGGAGTCTTGTAAA+GGG + Chr1:84918992-84919011 MsG0180004954.01.T01:intron 45.0%
! TCAGTCCCATTTTCTACGGT+GGG - Chr1:84918757-84918776 None:intergenic 45.0%
! TCCCATATCGACTGAAGATG+TGG + Chr1:84917141-84917160 MsG0180004954.01.T01:intron 45.0%
! TGAGGTTGGCCATACTATCA+AGG - Chr1:84920725-84920744 None:intergenic 45.0%
! TGGCACAGGCTCTAGTTTAT+TGG + Chr1:84922958-84922977 MsG0180004954.01.T01:three_prime_UTR 45.0%
! TGGGACTTGGAGTCTTGTAA+AGG + Chr1:84918991-84919010 MsG0180004954.01.T01:intron 45.0%
! TTCAGTCCCATTTTCTACGG+TGG - Chr1:84918758-84918777 None:intergenic 45.0%
!! ACTACTGTTGCTGGTTCAAC+TGG + Chr1:84921947-84921966 MsG0180004954.01.T01:CDS 45.0%
!! ACTGGATTTTGAGGAGGAAG+GGG - Chr1:84920033-84920052 None:intergenic 45.0%
!! AGATAGAGCACTGCAGAAAG+AGG - Chr1:84919878-84919897 None:intergenic 45.0%
!! ATCTTCTGGCTCAAAACCAC+TGG + Chr1:84922488-84922507 MsG0180004954.01.T01:three_prime_UTR 45.0%
!! CAAAGCTGGCTTGTAAGGTA+AGG - Chr1:84917396-84917415 None:intergenic 45.0%
!! CACCGAAATAACTCTGAGAC+TGG - Chr1:84922646-84922665 None:intergenic 45.0%
!! CACTGGATTTTGAGGAGGAA+GGG - Chr1:84920034-84920053 None:intergenic 45.0%
!! CATCTCACTGGATTTTGAGG+AGG - Chr1:84920039-84920058 None:intergenic 45.0%
!! GAATCTGATAGTGGTGATGC+TGG + Chr1:84921989-84922008 MsG0180004954.01.T01:CDS 45.0%
!! GATGAGTATGGTGGACAGTA+TGG + Chr1:84923223-84923242 MsG0180004954.01.T01:three_prime_UTR 45.0%
!! TCACTGGATTTTGAGGAGGA+AGG - Chr1:84920035-84920054 None:intergenic 45.0%
!! TGCTTCTTTTGACTCTCAGC+CGG + Chr1:84921330-84921349 MsG0180004954.01.T01:CDS 45.0%
!! TTGTTCTGACTCGGATCAAG+GGG + Chr1:84917954-84917973 MsG0180004954.01.T01:CDS 45.0%
!! TTTCCCGTAGGTGTTGTTGT+GGG + Chr1:84917642-84917661 MsG0180004954.01.T01:intron 45.0%
!!! TTTTCCCGTAGGTGTTGTTG+TGG + Chr1:84917641-84917660 MsG0180004954.01.T01:intron 45.0%
AAAACTGAGGACTGAGGCAC+TGG - Chr1:84923107-84923126 None:intergenic 50.0%
AACCACTGGAAACTGGGAAC+AGG + Chr1:84922502-84922521 MsG0180004954.01.T01:three_prime_UTR 50.0%
AACCTAGAGCTTGACCCAAG+TGG - Chr1:84917286-84917305 None:intergenic 50.0%
AAGACGAAGTTGCCACCACT+GGG - Chr1:84922409-84922428 None:intergenic 50.0%
AATGGAGAAGGGTTCTGTGG+AGG - Chr1:84923451-84923470 None:intergenic 50.0%
ACCAGTCGACCCAAACAATG+GGG - Chr1:84922764-84922783 None:intergenic 50.0%
ACTAGAGTTGACTGCCGAAG+AGG - Chr1:84922936-84922955 None:intergenic 50.0%
AGAATGAAGGGCCTGAAGCA+AGG - Chr1:84922230-84922249 None:intergenic 50.0%
AGACTGCCAGAAGCCTGAAA+TGG - Chr1:84923469-84923488 None:intergenic 50.0%
ATTGTGCCAAGGGCTACTAC+TGG + Chr1:84919378-84919397 MsG0180004954.01.T01:intron 50.0%
ATTTCAGGCTTCTGGCAGTC+TGG + Chr1:84923468-84923487 MsG0180004954.01.T01:three_prime_UTR 50.0%
CAAAAGCTTACATGGGGAGC+AGG + Chr1:84919249-84919268 MsG0180004954.01.T01:CDS 50.0%
CATGTCACCGGATCTACACA+AGG + Chr1:84919656-84919675 MsG0180004954.01.T01:CDS 50.0%
CCAGAAGCCTGAAATGGAGA+AGG - Chr1:84923463-84923482 None:intergenic 50.0%
CCTTCTCCATTTCAGGCTTC+TGG + Chr1:84923460-84923479 MsG0180004954.01.T01:three_prime_UTR 50.0%
CTCTCTAATTCTACAGGGGG+CGG + Chr1:84919580-84919599 MsG0180004954.01.T01:intron 50.0%
CTGCAGCTTACTACTGTTGC+TGG + Chr1:84921938-84921957 MsG0180004954.01.T01:intron 50.0%
CTGTGGTATTGCCATCCACA+GGG + Chr1:84920925-84920944 MsG0180004954.01.T01:intron 50.0%
CTTGTGTAGATCCGGTGACA+TGG - Chr1:84919658-84919677 None:intergenic 50.0%
GAGAGTCAGATTCGACCTGT+GGG + Chr1:84917458-84917477 MsG0180004954.01.T01:intron 50.0%
GAGGCAAACATGGTGAACTG+GGG - Chr1:84923079-84923098 None:intergenic 50.0%
GCTGTTAGGGAGAAGAGAAG+AGG + Chr1:84918668-84918687 MsG0180004954.01.T01:intron 50.0%
GGAACCAAACAGAGAACCAC+TGG - Chr1:84922672-84922691 None:intergenic 50.0%
GGACTGTAGATGCAGCTGTT+AGG + Chr1:84918654-84918673 MsG0180004954.01.T01:intron 50.0%
GGAGGCAAACATGGTGAACT+GGG - Chr1:84923080-84923099 None:intergenic 50.0%
GGCATGATCCATTGCAGACT+GGG - Chr1:84919637-84919656 None:intergenic 50.0%
GGCTCAAAACCACTGGAAAC+TGG + Chr1:84922495-84922514 MsG0180004954.01.T01:three_prime_UTR 50.0%
GGCTCTTCGAAGCTTGGAAA+TGG + Chr1:84920182-84920201 MsG0180004954.01.T01:intron 50.0%
GTCAACTCTAGTAGTGGCAC+AGG + Chr1:84922944-84922963 MsG0180004954.01.T01:three_prime_UTR 50.0%
GTTGATCCTTCAAAGGAGGC+TGG + Chr1:84921203-84921222 MsG0180004954.01.T01:intron 50.0%
GTTTGTACTCCTGAGCGTGA+AGG + Chr1:84917303-84917322 MsG0180004954.01.T01:intron 50.0%
TACCCCACAACAACACCTAC+GGG - Chr1:84917648-84917667 None:intergenic 50.0%
TCACAGGTTTCCACTCCTTC+AGG + Chr1:84923388-84923407 MsG0180004954.01.T01:three_prime_UTR 50.0%
TCATCACCTTTGTCCGGGTT+TGG + Chr1:84923030-84923049 MsG0180004954.01.T01:three_prime_UTR 50.0%
TCGGCAGTCAACTCTAGTAG+TGG + Chr1:84922938-84922957 MsG0180004954.01.T01:three_prime_UTR 50.0%
TCTCTAATTCTACAGGGGGC+GGG + Chr1:84919581-84919600 MsG0180004954.01.T01:intron 50.0%
TCTGTGGTATTGCCATCCAC+AGG + Chr1:84920924-84920943 MsG0180004954.01.T01:intron 50.0%
TGACCAAACATAGGACTCGC+AGG - Chr1:84923275-84923294 None:intergenic 50.0%
TGAGAGTCAGATTCGACCTG+TGG + Chr1:84917457-84917476 MsG0180004954.01.T01:intron 50.0%
TGGAGGCAAACATGGTGAAC+TGG - Chr1:84923081-84923100 None:intergenic 50.0%
TGGCATGATCCATTGCAGAC+TGG - Chr1:84919638-84919657 None:intergenic 50.0%
TGGGGAAGCAACAGTAGTAC+TGG - Chr1:84923061-84923080 None:intergenic 50.0%
TGTCACCGGATCTACACAAG+GGG + Chr1:84919658-84919677 MsG0180004954.01.T01:CDS 50.0%
TTACTTGATGCAGCAAGCGC+AGG - Chr1:84922366-84922385 None:intergenic 50.0%
TTGTGCCAAGGGCTACTACT+GGG + Chr1:84919379-84919398 MsG0180004954.01.T01:intron 50.0%
! AATGCCACTTCTGCTTCCAC+TGG + Chr1:84922324-84922343 MsG0180004954.01.T01:three_prime_UTR 50.0%
! AGTACTGGACGTTCCAAACC+CGG - Chr1:84923046-84923065 None:intergenic 50.0%
! CCTTACAAGCCAGCTTTGTG+AGG + Chr1:84917398-84917417 MsG0180004954.01.T01:intron 50.0%
! GAGCCGTCTCTTTTCTTCTG+CGG + Chr1:84920816-84920835 MsG0180004954.01.T01:intron 50.0%
! GTGTTGCTCATTTGGCGATG+TGG + Chr1:84923695-84923714 MsG0180004954.01.T01:three_prime_UTR 50.0%
! TCAGGTGGTGGTGATAAGTC+TGG + Chr1:84923528-84923547 MsG0180004954.01.T01:three_prime_UTR 50.0%
! TTTTGTGACCCAAGACCTCG+TGG + Chr1:84919425-84919444 MsG0180004954.01.T01:intron 50.0%
!! AGGACTGGTTCCTGAATGAG+TGG - Chr1:84923338-84923357 None:intergenic 50.0%
!! AGTTATTTCGGTGCTGCCAG+TGG + Chr1:84922653-84922672 MsG0180004954.01.T01:three_prime_UTR 50.0%
!! CCTCACAAAGCTGGCTTGTA+AGG - Chr1:84917401-84917420 None:intergenic 50.0%
!! GCTTCTTTTGACTCTCAGCC+GGG + Chr1:84921331-84921350 MsG0180004954.01.T01:CDS 50.0%
!! TATGGTGGACAGTATGGCTG+AGG + Chr1:84923229-84923248 MsG0180004954.01.T01:three_prime_UTR 50.0%
!! TGGAAAGGACTGGTTCCTGA+AGG - Chr1:84923343-84923362 None:intergenic 50.0%
!! TGTTCTGACTCGGATCAAGG+GGG + Chr1:84917955-84917974 MsG0180004954.01.T01:CDS 50.0%
!! TTCCCGTAGGTGTTGTTGTG+GGG + Chr1:84917643-84917662 MsG0180004954.01.T01:intron 50.0%
!!! AGCACAGCGAGTGCCATTTT+TGG + Chr1:84922587-84922606 MsG0180004954.01.T01:three_prime_UTR 50.0%
!!! GCACAGCGAGTGCCATTTTT+GGG + Chr1:84922588-84922607 MsG0180004954.01.T01:three_prime_UTR 50.0%
!!! TAGACTTTTGACGGACTCGG+CGG - Chr1:84919826-84919845 None:intergenic 50.0%
AAGAGGTGAGCTGGAGCCTT+TGG - Chr1:84919861-84919880 None:intergenic 55.0%
ACCGGCAGAAGGAGAAGCTT+GGG - Chr1:84922693-84922712 None:intergenic 55.0%
ACTGGGAACAGGCAAGATGC+AGG + Chr1:84922513-84922532 MsG0180004954.01.T01:three_prime_UTR 55.0%
ACTGGTCGTGGAGGCAAACA+TGG - Chr1:84923089-84923108 None:intergenic 55.0%
AGACGAAGTTGCCACCACTG+GGG - Chr1:84922408-84922427 None:intergenic 55.0%
AGCTCGTCCCTTTCTGCAAG+TGG + Chr1:84922294-84922313 MsG0180004954.01.T01:three_prime_UTR 55.0%
AGGAAGGGGAAAGCTCGTAC+TGG - Chr1:84920019-84920038 None:intergenic 55.0%
AGGAGGAGGGAGTTCTCGTT+AGG + Chr1:84923504-84923523 MsG0180004954.01.T01:three_prime_UTR 55.0%
AGGGAGTTCTCGTTAGGCTC+AGG + Chr1:84923510-84923529 MsG0180004954.01.T01:three_prime_UTR 55.0%
AGGGTTAGGGCTTCCAAAGC+AGG - Chr1:84923165-84923184 None:intergenic 55.0%
ATCGTGGGCCTATAACCCAC+AGG - Chr1:84917476-84917495 None:intergenic 55.0%
CACCTTCAATGCTACGGGAC+AGG + Chr1:84920161-84920180 MsG0180004954.01.T01:intron 55.0%
CACTGCAGAAAGAGGTGAGC+TGG - Chr1:84919870-84919889 None:intergenic 55.0%
CAGATCTGCCACGAGGTCTT+GGG - Chr1:84919436-84919455 None:intergenic 55.0%
CCAAACATAGGACTCGCAGG+CGG - Chr1:84923272-84923291 None:intergenic 55.0%
CCACTCTGAGCCATCTCACA+TGG + Chr1:84919168-84919187 MsG0180004954.01.T01:intron 55.0%
CCATGTGAGATGGCTCAGAG+TGG - Chr1:84919171-84919190 None:intergenic 55.0%
CGGCACATCTGCTTCCTCTT+CGG + Chr1:84922919-84922938 MsG0180004954.01.T01:three_prime_UTR 55.0%
CGTCTTCACCCAGTCTGCAA+TGG + Chr1:84919626-84919645 MsG0180004954.01.T01:CDS 55.0%
CGTGCGATATCCTGCTCGTA+GGG + Chr1:84919301-84919320 MsG0180004954.01.T01:CDS 55.0%
CTAGATCCGTTGGGCCACTT+GGG + Chr1:84917269-84917288 MsG0180004954.01.T01:intron 55.0%
GAAGACGAAGTTGCCACCAC+TGG - Chr1:84922410-84922429 None:intergenic 55.0%
GACGTTCCAAACCCGGACAA+AGG - Chr1:84923039-84923058 None:intergenic 55.0%
GAGTTCTCGTTAGGCTCAGG+TGG + Chr1:84923513-84923532 MsG0180004954.01.T01:three_prime_UTR 55.0%
GATCCTTCAAAGGAGGCTGG+TGG + Chr1:84921206-84921225 MsG0180004954.01.T01:intron 55.0%
GCTGCCAGTGGTTCTCTGTT+TGG + Chr1:84922665-84922684 MsG0180004954.01.T01:three_prime_UTR 55.0%
GGCAGTTCTTCTGCTGCAGT+TGG + Chr1:84922563-84922582 MsG0180004954.01.T01:three_prime_UTR 55.0%
GTTGTGTCTTCCCTACGAGC+AGG - Chr1:84919314-84919333 None:intergenic 55.0%
GTTTGGTCAACAACCTGCCC+CGG + Chr1:84923286-84923305 MsG0180004954.01.T01:three_prime_UTR 55.0%
TCCCAAGCTTCTCCTTCTGC+CGG + Chr1:84922689-84922708 MsG0180004954.01.T01:three_prime_UTR 55.0%
TCCCCATTGTTTGGGTCGAC+TGG + Chr1:84922760-84922779 MsG0180004954.01.T01:three_prime_UTR 55.0%
TCGTCCCTTTCTGCAAGTGG+TGG + Chr1:84922297-84922316 MsG0180004954.01.T01:three_prime_UTR 55.0%
TCTAGATCCGTTGGGCCACT+TGG + Chr1:84917268-84917287 MsG0180004954.01.T01:intron 55.0%
TGCAGACTGGGTGAAGACGA+AGG - Chr1:84919625-84919644 None:intergenic 55.0%
TGCCTGTTCCCAGTTTCCAG+TGG - Chr1:84922507-84922526 None:intergenic 55.0%
TTCCAAAGCAGGCTGTGTGG+AGG - Chr1:84923154-84923173 None:intergenic 55.0%
TTCTCGTTAGGCTCAGGTGG+TGG + Chr1:84923516-84923535 MsG0180004954.01.T01:three_prime_UTR 55.0%
! AGCCTGTCCCGTAGCATTGA+AGG - Chr1:84920166-84920185 None:intergenic 55.0%
!! AGGACTGGTTCCTGAAGGAG+TGG - Chr1:84923401-84923420 None:intergenic 55.0%
!! TCGCACGCCTAGCATTGATG+AGG - Chr1:84919288-84919307 None:intergenic 55.0%
!! TCTTTTGACTCTCAGCCGGG+AGG + Chr1:84921334-84921353 MsG0180004954.01.T01:CDS 55.0%
!!! TTTTGACGGACTCGGCGGAT+AGG - Chr1:84919821-84919840 None:intergenic 55.0%
ACCACACACCCTTCACGCTC+AGG - Chr1:84917315-84917334 None:intergenic 60.0%
ACTGAAGTGCGGCCTGAAGC+AGG - Chr1:84923633-84923652 None:intergenic 60.0%
CAAAGCAGGCTGTGTGGAGG+TGG - Chr1:84923151-84923170 None:intergenic 60.0%
CACCGGCAGAAGGAGAAGCT+TGG - Chr1:84922694-84922713 None:intergenic 60.0%
CACCTCCACACAGCCTGCTT+TGG + Chr1:84923149-84923168 MsG0180004954.01.T01:three_prime_UTR 60.0%
CCGCCTGCGAGTCCTATGTT+TGG + Chr1:84923269-84923288 MsG0180004954.01.T01:three_prime_UTR 60.0%
CTCAGCCGGGAGGATCAATC+AGG + Chr1:84921344-84921363 MsG0180004954.01.T01:CDS 60.0%
GCAGATCTGCCACGAGGTCT+TGG - Chr1:84919437-84919456 None:intergenic 60.0%
GCGTGCGATATCCTGCTCGT+AGG + Chr1:84919300-84919319 MsG0180004954.01.T01:CDS 60.0%
GCTTGACCCAAGTGGCCCAA+CGG - Chr1:84917278-84917297 None:intergenic 60.0%
GGACCACCAGCCTCCTTTGA+AGG - Chr1:84921212-84921231 None:intergenic 60.0%
GGCCACTTGGGTCAAGCTCT+AGG + Chr1:84917281-84917300 MsG0180004954.01.T01:intron 60.0%
GGCTTCCAAAGCAGGCTGTG+TGG - Chr1:84923157-84923176 None:intergenic 60.0%
GGGACAGGCTCTTCGAAGCT+TGG + Chr1:84920176-84920195 MsG0180004954.01.T01:intron 60.0%
GTGTGCCCAGTAGTAGCCCT+TGG - Chr1:84919387-84919406 None:intergenic 60.0%
! TCCTGAGCGTGAAGGGTGTG+TGG + Chr1:84917311-84917330 MsG0180004954.01.T01:intron 60.0%
AGCAGGCTGTGTGGAGGTGG+AGG - Chr1:84923148-84923167 None:intergenic 65.0%
AGTTGCCACCACTGGGGTGG+AGG - Chr1:84922402-84922421 None:intergenic 65.0%
CACCACTGGGGTGGAGGAAG+AGG - Chr1:84922396-84922415 None:intergenic 65.0%
CGAAGTTGCCACCACTGGGG+TGG - Chr1:84922405-84922424 None:intergenic 65.0%
CTCTTCCTCCACCCCAGTGG+TGG + Chr1:84922394-84922413 MsG0180004954.01.T01:three_prime_UTR 65.0%
GTCCTCTTCCTCCACCCCAG+TGG + Chr1:84922391-84922410 MsG0180004954.01.T01:three_prime_UTR 65.0%
!! GACTGAGGCACTGGTCGTGG+AGG - Chr1:84923098-84923117 None:intergenic 65.0%
!! GAGGACTGAGGCACTGGTCG+TGG - Chr1:84923101-84923120 None:intergenic 65.0%
!! GGGGGCGGGCTTGCTGTTCA+TGG + Chr1:84919595-84919614 MsG0180004954.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 84916714 84924030 84916714 ID=MsG0180004954.01;Name=MsG0180004954.01
Chr1 mRNA 84916714 84924030 84916714 ID=MsG0180004954.01.T01;Parent=MsG0180004954.01;Name=MsG0180004954.01.T01;_AED=0.31;_eAED=0.33;_QI=0|0.11|0.2|1|0.88|0.9|10|1976|438
Chr1 exon 84916714 84916830 84916714 ID=MsG0180004954.01.T01:exon:27968;Parent=MsG0180004954.01.T01
Chr1 exon 84917892 84918038 84917892 ID=MsG0180004954.01.T01:exon:27969;Parent=MsG0180004954.01.T01
Chr1 exon 84919212 84919357 84919212 ID=MsG0180004954.01.T01:exon:27970;Parent=MsG0180004954.01.T01
Chr1 exon 84919596 84919679 84919596 ID=MsG0180004954.01.T01:exon:27971;Parent=MsG0180004954.01.T01
Chr1 exon 84919888 84919999 84919888 ID=MsG0180004954.01.T01:exon:27972;Parent=MsG0180004954.01.T01
Chr1 exon 84920183 84920491 84920183 ID=MsG0180004954.01.T01:exon:27973;Parent=MsG0180004954.01.T01
Chr1 exon 84920817 84920929 84920817 ID=MsG0180004954.01.T01:exon:27974;Parent=MsG0180004954.01.T01
Chr1 exon 84921021 84921115 84921021 ID=MsG0180004954.01.T01:exon:27975;Parent=MsG0180004954.01.T01
Chr1 exon 84921302 84921384 84921302 ID=MsG0180004954.01.T01:exon:27976;Parent=MsG0180004954.01.T01
Chr1 exon 84921944 84924030 84921944 ID=MsG0180004954.01.T01:exon:27977;Parent=MsG0180004954.01.T01
Chr1 CDS 84916714 84916830 84916714 ID=MsG0180004954.01.T01:cds;Parent=MsG0180004954.01.T01
Chr1 CDS 84917892 84918038 84917892 ID=MsG0180004954.01.T01:cds;Parent=MsG0180004954.01.T01
Chr1 CDS 84919212 84919357 84919212 ID=MsG0180004954.01.T01:cds;Parent=MsG0180004954.01.T01
Chr1 CDS 84919596 84919679 84919596 ID=MsG0180004954.01.T01:cds;Parent=MsG0180004954.01.T01
Chr1 CDS 84919888 84919999 84919888 ID=MsG0180004954.01.T01:cds;Parent=MsG0180004954.01.T01
Chr1 CDS 84920183 84920491 84920183 ID=MsG0180004954.01.T01:cds;Parent=MsG0180004954.01.T01
Chr1 CDS 84920817 84920929 84920817 ID=MsG0180004954.01.T01:cds;Parent=MsG0180004954.01.T01
Chr1 CDS 84921021 84921115 84921021 ID=MsG0180004954.01.T01:cds;Parent=MsG0180004954.01.T01
Chr1 CDS 84921302 84921384 84921302 ID=MsG0180004954.01.T01:cds;Parent=MsG0180004954.01.T01
Chr1 CDS 84921944 84922054 84921944 ID=MsG0180004954.01.T01:cds;Parent=MsG0180004954.01.T01
Chr1 three_prime_UTR 84922055 84924030 84922055 ID=MsG0180004954.01.T01:three_prime_utr;Parent=MsG0180004954.01.T01
Gene Sequence

>MsG0180004954.01.T01

TTGATATGTGGTTTTTATGATGCAGGGTTGGAACAAGAAATGAGACAGGACAATCATCAAGAAGAAGCTGTAGAGATGGAACAAGAAATGAGACAGGACAATCATCAAGAAGAAGCTGTTGCAAAAGAATCTTCTGGCAATCAACAAAGAGCAGTTGGTGAAAGTAATGTTCAAATTAATTGTTCTGACTCGGATCAAGGGGGATTGACTGATCTTGAGAAACTGTTGAAGCATAAGACTTTCACCAGGCATGTTTTGTATCCTGTTCCTATTGAGGATGTTGCTTCACCTGTAGAGCTTGCAAAAGCTTACATGGGGAGCAGGCAATCCAATGTATCCTCATCAATGCTAGGCGTGCGATATCCTGCTCGTAGGGAAGACACAACTCCTCTAAAAAGTGAAAAATCTCCGGGGCGGGCTTGCTGTTCATGGCGAGCCTTCGTCTTCACCCAGTCTGCAATGGATCATGCCATGTCACCGGATCTACACAAGGGTGCTCTATCTGTCTATAGGAACGGATTGGGTATTGAAGCTGCTCAGCAACCCTCATCTTCCTTGCATAAGCCTGTTCTGCTAGATAAAGTTAAGCACAAGTCCGAAGAAAACGCTCTTCGAAGCTTGGAAATGGTAGATGCGTCAAAATTGCCGGACAGTTTACAAGGAAATAATTTGGATGGCACATTTGGAAATTTTACTTCCAGTGCTCAGAATCAGAAGTCAATTTCACATAGAGATAAGGGTGAAAACAGTCCATTGAAACTTGTTGCTTCTTCCAATGAATCGGTTCCTATTGTAACCACTACAGAGACCACAAAGTCAAGCAATCAAGTCTTGTCTAGTGAAAATTCTTTTATGATGAAATCGGTTTCTAACCCTACACAAAAGAAGCGAGCATTCCATATGAGTGCACACGAGAGCCGTCTCTTTTCTTCTGCGGAAAAAGAATCAAAAAGCGCCATTGTTATTGCGGACAAAGTTTCTTCTGGTTCTGAAGCCATGCACATGAAAGTCCCTCAACATCATCTGTGTTGCAGTTACAGCACCTACAATAACAACTTTTGGTCTGACAAGCCTGCTTTACCAAATGGGTCAACTGCTAATCCTTCTTTGTTTAATTTTTCTATTGGTGGTGAGTCTACTCCGAAATTTGGTGCTTCTTTTGACTCTCAGCCGGGAGGATCAATCAGGTTAGTCTATGTTTCTTTACTTACTACTGTTGCTGGTTCAACTGGTTCTATGCAAAAAGTTTGTGAATCTGATAGTGGTGATGCTGGGACTGATAAAAATACGGATTTTCTGTTAGGGCATCGGAACTAG
Protein sequence

>MsG0180004954.01.T01

LICGFYDAGLEQEMRQDNHQEEAVEMEQEMRQDNHQEEAVAKESSGNQQRAVGESNVQINCSDSDQGGLTDLEKLLKHKTFTRHVLYPVPIEDVASPVELAKAYMGSRQSNVSSSMLGVRYPARREDTTPLKSEKSPGRACCSWRAFVFTQSAMDHAMSPDLHKGALSVYRNGLGIEAAQQPSSSLHKPVLLDKVKHKSEENALRSLEMVDASKLPDSLQGNNLDGTFGNFTSSAQNQKSISHRDKGENSPLKLVASSNESVPIVTTTETTKSSNQVLSSENSFMMKSVSNPTQKKRAFHMSAHESRLFSSAEKESKSAIVIADKVSSGSEAMHMKVPQHHLCCSYSTYNNNFWSDKPALPNGSTANPSLFNFSIGGESTPKFGASFDSQPGGSIRLVYVSLLTTVAGSTGSMQKVCESDSGDAGTDKNTDFLLGHRN*