AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680035897.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035897.01.T01 MTR_6g092940 89.956 229 20 1 1 226 114 342 3.18e-134 393
MsG0680035897.01.T01 MTR_6g092940 70.423 142 12 1 225 336 404 545 1.56e-61 205
MsG0680035897.01.T01 MTR_6g092840 66.535 254 71 4 1 241 113 365 2.07e-104 317
MsG0680035897.01.T01 MTR_6g092840 64.539 141 21 2 225 336 410 550 1.42e-52 182
MsG0680035897.01.T01 MTR_6g092820 66.667 228 61 3 1 224 102 318 2.68e-93 287
MsG0680035897.01.T01 MTR_6g092820 56.954 151 36 1 214 335 371 521 3.23e-50 175
MsG0680035897.01.T01 MTR_6g092970 42.174 230 100 4 1 225 16 217 3.68e-42 151
MsG0680035897.01.T01 MTR_6g092970 49.265 136 47 1 222 335 277 412 1.45e-38 142
MsG0680035897.01.T01 MTR_6g092890 39.526 253 100 5 1 250 106 308 7.37e-38 138
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035897.01.T01 AT4G10310 38.462 234 111 4 1 226 89 297 7.03e-38 141
MsG0680035897.01.T01 AT4G10310 42.657 143 50 4 225 335 359 501 1.53e-26 110

Find 59 sgRNAs with CRISPR-Local

Find 343 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTCATGTGATTTAATATT+TGG 0.111690 6:-114112653 None:intergenic
GTATTTGTCTATGAAATATT+TGG 0.172984 6:+114112703 MsG0680035897.01.T01:CDS
GGATTGGATTTGTTGGAAAA+TGG 0.247031 6:+114118900 MsG0680035897.01.T01:CDS
CTCATTCCACAAGTACTTCT+TGG 0.250746 6:+114112953 MsG0680035897.01.T01:CDS
GAAATCTTTACCTCCATGTT+AGG 0.285989 6:+114112482 MsG0680035897.01.T01:CDS
TATTTGGGTTATATAATTCT+TGG 0.297370 6:+114112719 MsG0680035897.01.T01:CDS
CTCCAAATAGACCTATAAAA+TGG 0.306144 6:-114112757 None:intergenic
GAAACACACTCTTTATCTTA+TGG 0.324424 6:+114113102 MsG0680035897.01.T01:CDS
TATTTGTCTATGAAATATTT+GGG 0.336831 6:+114112704 MsG0680035897.01.T01:CDS
AACAAATGGATTGGATTTGT+TGG 0.352409 6:+114118893 MsG0680035897.01.T01:CDS
TCAGAACGTAGGATTTACTA+TGG 0.370500 6:+114118826 MsG0680035897.01.T01:CDS
CTTATACTTGTTACGTTGCT+TGG 0.387137 6:+114118944 MsG0680035897.01.T01:CDS
AATTCAGATTGAAGTTGAAA+TGG 0.415458 6:+114112592 MsG0680035897.01.T01:CDS
CTGAATTTGATCAACAATGA+TGG 0.416216 6:-114112576 None:intergenic
CAAGGGAGGAATGAGGTATA+AGG 0.417015 6:-114114268 None:intergenic
TTTAATATTTGGCTTTGATA+AGG 0.417107 6:-114112642 None:intergenic
TCATTCCACAAGTACTTCTT+GGG 0.420368 6:+114112954 MsG0680035897.01.T01:CDS
AGGCAAATTGTGAAAACAAA+TGG 0.428571 6:+114118879 MsG0680035897.01.T01:CDS
ATATTGCTGTTGAAGTTGTC+AGG 0.430083 6:+114114467 MsG0680035897.01.T01:CDS
CTTATACCTCATTCCTCCCT+TGG 0.433883 6:+114114269 MsG0680035897.01.T01:CDS
AATTGTGAAAACAAATGGAT+TGG 0.439853 6:+114118884 MsG0680035897.01.T01:CDS
CTCACTGCTTTCTGACAATC+CGG 0.446157 6:-114114302 None:intergenic
TGAATTTGATCAACAATGAT+GGG 0.452048 6:-114112575 None:intergenic
GTAGCACAAGTGAAAATTTG+AGG 0.459197 6:+114112681 MsG0680035897.01.T01:CDS
AAATCTTTACCTCCATGTTA+GGG 0.460275 6:+114112483 MsG0680035897.01.T01:CDS
GTTTCAACATTTGCAAGTTG+TGG 0.462060 6:+114112869 MsG0680035897.01.T01:CDS
CTCCCTTGGAAAGACGGATC+CGG 0.464536 6:+114114283 MsG0680035897.01.T01:CDS
ATTACCGTATTAATGTTCAT+AGG 0.473350 6:+114112455 None:intergenic
TTGAACAATGTAGAGGAGGT+TGG 0.493563 6:+114113058 MsG0680035897.01.T01:CDS
TTTATAAGAAGAAAGAGTGT+AGG 0.516889 6:+114113029 MsG0680035897.01.T01:CDS
AATCCGGATCCGTCTTTCCA+AGG 0.531162 6:-114114286 None:intergenic
TTTAGTACTTGTTTAGCACT+AGG 0.532880 6:-114112803 None:intergenic
ATGAATCAGAGAAGTTTCCA+TGG 0.537160 6:-114119001 None:intergenic
TACAAAATCTCAAGCATGGA+GGG 0.537636 6:-114112988 None:intergenic
TTGAAGACATTGAAATTGAG+AGG 0.543741 6:-114114445 None:intergenic
AACTGAGAGGAAACAATTGA+AGG 0.543924 6:+114114417 MsG0680035897.01.T01:CDS
ACAGAGATGCAGATAATCCA+TGG 0.550388 6:+114118984 MsG0680035897.01.T01:CDS
TATTCCAACAAATGAAAACA+TGG 0.552785 6:+114112895 MsG0680035897.01.T01:CDS
TCATTCCTCCCTTGGAAAGA+CGG 0.556186 6:+114114277 MsG0680035897.01.T01:CDS
CATATACAAAATCTCAAGCA+TGG 0.570855 6:-114112992 None:intergenic
TAGCACTAGGAATCATTGAA+AGG 0.574930 6:-114112790 None:intergenic
TTGATAAGGAAGTTATGTGA+AGG 0.575813 6:-114112628 None:intergenic
ATCCGGATCCGTCTTTCCAA+GGG 0.578745 6:-114114285 None:intergenic
GTTGGAAAATGGAGTGATGA+GGG 0.582784 6:+114118911 MsG0680035897.01.T01:CDS
GAATTTGATCAACAATGATG+GGG 0.595346 6:-114112574 None:intergenic
AATGAAATAAAGCCCTAACA+TGG 0.597904 6:-114112495 None:intergenic
TGTTGGAAAATGGAGTGATG+AGG 0.598002 6:+114118910 MsG0680035897.01.T01:CDS
GTGTTCCCAAGAAGTACTTG+TGG 0.605805 6:-114112959 None:intergenic
ACCGTATTAATGTTCATAGG+TGG 0.623963 6:+114112458 None:intergenic
CAGAACGTAGGATTTACTAT+GGG 0.630658 6:+114118827 MsG0680035897.01.T01:CDS
GGGAGGAATGAGGTATAAGG+TGG 0.631476 6:-114114265 None:intergenic
CGGATCCGTCTTTCCAAGGG+AGG 0.634629 6:-114114282 None:intergenic
GTCTTTCCAAGGGAGGAATG+AGG 0.635044 6:-114114275 None:intergenic
GGAATGAGGTATAAGGTGGA+AGG 0.636325 6:-114114261 None:intergenic
TACTAGTTTGCATAACTGAG+AGG 0.669787 6:+114114404 MsG0680035897.01.T01:intron
TGAACGACAATTGCATCCAG+AGG 0.689750 6:+114118859 MsG0680035897.01.T01:CDS
ATACAAAATCTCAAGCATGG+AGG 0.690104 6:-114112989 None:intergenic
GAAATAAAGCCCTAACATGG+AGG 0.692954 6:-114112492 None:intergenic
GACAGTGCATATCAGAACGT+AGG 0.730512 6:+114118815 MsG0680035897.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTATTATTTTTATTATT+AGG + Chr6:114113375-114113394 MsG0680035897.01.T01:intron 0.0%
!! AAGATTTAATAAAAAAATTG+AGG + Chr6:114113562-114113581 MsG0680035897.01.T01:intron 10.0%
!! AATAATATATATTATCAACT+AGG + Chr6:114114764-114114783 MsG0680035897.01.T01:intron 10.0%
!! AATTATTATCAAAAATTGAT+TGG + Chr6:114113205-114113224 MsG0680035897.01.T01:intron 10.0%
!! AGATTTAATAAAAAAATTGA+GGG + Chr6:114113563-114113582 MsG0680035897.01.T01:intron 10.0%
!! CTAATTCATTAAAAATAATA+AGG + Chr6:114115492-114115511 MsG0680035897.01.T01:intron 10.0%
!!! ATTTTAATCATATTTTGTTA+TGG - Chr6:114115117-114115136 None:intergenic 10.0%
!!! ATTTTAATGTAAAAAATATG+TGG - Chr6:114113503-114113522 None:intergenic 10.0%
!! AAAAAATTGTCATTAATACA+TGG + Chr6:114117963-114117982 MsG0680035897.01.T01:intron 15.0%
!! AACAACAAAATGATTATTAT+TGG - Chr6:114116434-114116453 None:intergenic 15.0%
!! ACAACAAAATGATTATTATT+GGG - Chr6:114116433-114116452 None:intergenic 15.0%
!! ACTAACTTCTTATAATAATT+TGG + Chr6:114116781-114116800 MsG0680035897.01.T01:intron 15.0%
!! ATAAAATGATCCAAAATAAA+TGG - Chr6:114117201-114117220 None:intergenic 15.0%
!! ATAACATTTGCAATATTAAT+GGG + Chr6:114113855-114113874 MsG0680035897.01.T01:intron 15.0%
!! CATATGTATCTTTATAATAT+AGG + Chr6:114118315-114118334 MsG0680035897.01.T01:intron 15.0%
!! TAAACTAAAAAAAACCAATA+TGG - Chr6:114118380-114118399 None:intergenic 15.0%
!! TAAGAATAAGAAATAAAAGA+TGG + Chr6:114116599-114116618 MsG0680035897.01.T01:intron 15.0%
!! TAATTAAGTTTGATGAAAAA+AGG - Chr6:114118471-114118490 None:intergenic 15.0%
!! TATAACATTTGCAATATTAA+TGG + Chr6:114113854-114113873 MsG0680035897.01.T01:intron 15.0%
!! TATAGTAATTATTACTACTA+TGG + Chr6:114117704-114117723 MsG0680035897.01.T01:intron 15.0%
!! TATTAAAAAATTACAATCCA+AGG + Chr6:114113608-114113627 MsG0680035897.01.T01:intron 15.0%
!! TATTTGTCTATGAAATATTT+GGG + Chr6:114112704-114112723 MsG0680035897.01.T01:CDS 15.0%
!! TCATCTAAATTATACTATTT+AGG - Chr6:114114150-114114169 None:intergenic 15.0%
!!! AAGTAACATTGATATTTTAT+TGG + Chr6:114118053-114118072 MsG0680035897.01.T01:intron 15.0%
!!! AATTTGTTTTAAATTAAGAC+TGG - Chr6:114118576-114118595 None:intergenic 15.0%
!!! AGTCTTAATTTAAAACAAAT+TGG + Chr6:114118575-114118594 MsG0680035897.01.T01:intron 15.0%
!!! ATTAAAAAGAATCTCTTTTT+TGG + Chr6:114114528-114114547 MsG0680035897.01.T01:intron 15.0%
!!! ATTATAATTCTCCATTTTAT+AGG + Chr6:114112746-114112765 MsG0680035897.01.T01:CDS 15.0%
!!! ATTTGTTTTAAATTAAGACT+GGG - Chr6:114118575-114118594 None:intergenic 15.0%
!!! GAAAAAAAAATCATGAATTT+TGG - Chr6:114116288-114116307 None:intergenic 15.0%
!!! TGGTTTTTTTTAGTTTAAAT+TGG + Chr6:114118383-114118402 MsG0680035897.01.T01:intron 15.0%
!!! TGTATACCTTTAATTTAATT+AGG + Chr6:114118260-114118279 MsG0680035897.01.T01:intron 15.0%
!!! TTAAAAAGAATCTCTTTTTT+GGG + Chr6:114114529-114114548 MsG0680035897.01.T01:intron 15.0%
!!! TTTCATTTTCTTAATGTTTT+GGG + Chr6:114116223-114116242 MsG0680035897.01.T01:intron 15.0%
!!! TTTTCATTTTCTTAATGTTT+TGG + Chr6:114116222-114116241 MsG0680035897.01.T01:intron 15.0%
!!! TTTTTGTTTATCATAATGAT+CGG - Chr6:114114866-114114885 None:intergenic 15.0%
!! AAAATACAAGAGAGAAAATA+TGG - Chr6:114117759-114117778 None:intergenic 20.0%
!! AAACAAGTACTAAAAAACAA+GGG + Chr6:114112812-114112831 MsG0680035897.01.T01:CDS 20.0%
!! AAATATGATTAAAATCAGCA+TGG + Chr6:114115122-114115141 MsG0680035897.01.T01:intron 20.0%
!! AAGTACAAGATAGAAATAAA+TGG - Chr6:114117118-114117137 None:intergenic 20.0%
!! AATAAGAAATAAAAGATGGT+GGG + Chr6:114116603-114116622 MsG0680035897.01.T01:intron 20.0%
!! AATTATTATACCAGAGATAA+AGG + Chr6:114117829-114117848 MsG0680035897.01.T01:intron 20.0%
!! ACAAAAATATCATTCACTAA+TGG + Chr6:114116928-114116947 MsG0680035897.01.T01:intron 20.0%
!! AGTAAACAGTATTATATACT+AGG - Chr6:114114189-114114208 None:intergenic 20.0%
!! AGTATAGAAAAATCCAATAT+AGG - Chr6:114113981-114114000 None:intergenic 20.0%
!! ATAAATAAATGACACAAAGT+GGG - Chr6:114115255-114115274 None:intergenic 20.0%
!! ATGTAAAAAATATGTGGATA+TGG - Chr6:114113497-114113516 None:intergenic 20.0%
!! CTTAATGTTAAAATGTATGT+AGG + Chr6:114118722-114118741 MsG0680035897.01.T01:intron 20.0%
!! GATTCATGTGATTTAATATT+TGG - Chr6:114112656-114112675 None:intergenic 20.0%
!! GTATTTGTCTATGAAATATT+TGG + Chr6:114112703-114112722 MsG0680035897.01.T01:CDS 20.0%
!! TAAACAAGTACTAAAAAACA+AGG + Chr6:114112811-114112830 MsG0680035897.01.T01:CDS 20.0%
!! TATAAATAAATGACACAAAG+TGG - Chr6:114115256-114115275 None:intergenic 20.0%
!! TATAGTAAAAATTGAGAAAG+TGG - Chr6:114112849-114112868 None:intergenic 20.0%
!! TCAAATGTAGAGAATTATAT+GGG - Chr6:114113685-114113666 None:intergenic 20.0%
!! TGAACACCTAATTAAATTAA+AGG - Chr6:114118269-114118288 None:intergenic 20.0%
!! TGTAAAACGACTTATAATTT+GGG + Chr6:114118079-114118098 MsG0680035897.01.T01:intron 20.0%
!! TGTGAATTAGTAGAAAAATA+TGG + Chr6:114114724-114114743 MsG0680035897.01.T01:intron 20.0%
!! TTACTTTATCTAGGTTTAAT+TGG + Chr6:114113928-114113947 MsG0680035897.01.T01:intron 20.0%
!! TTGTAAAACGACTTATAATT+TGG + Chr6:114118078-114118097 MsG0680035897.01.T01:intron 20.0%
!!! AAAGAGATTCTTTTTAATGT+TGG - Chr6:114114526-114114545 None:intergenic 20.0%
!!! AATAGAGCATTAAAAACAAA+AGG + Chr6:114115620-114115639 MsG0680035897.01.T01:intron 20.0%
!!! ATACATATGAGTTAGTTTTA+AGG - Chr6:114118304-114118323 None:intergenic 20.0%
!!! ATACTATTTAGGTTTTACTT+TGG - Chr6:114114139-114114158 None:intergenic 20.0%
!!! ATATTTTGTTATGGTGTAAA+TGG - Chr6:114115108-114115127 None:intergenic 20.0%
!!! CAATATTAATGGGTTTATAT+AGG + Chr6:114113865-114113884 MsG0680035897.01.T01:intron 20.0%
!!! CAGAATTATATGTCATTTTA+CGG - Chr6:114117626-114117645 None:intergenic 20.0%
!!! CTACATACATTTTAACATTA+AGG - Chr6:114118724-114118743 None:intergenic 20.0%
!!! GAAATATAATTTAGAACAGA+GGG + Chr6:114117669-114117688 MsG0680035897.01.T01:intron 20.0%
!!! TACATATGAGTTAGTTTTAA+GGG - Chr6:114118303-114118322 None:intergenic 20.0%
!!! TACTAGGCTAAATTTTATTT+TGG - Chr6:114114173-114114192 None:intergenic 20.0%
!!! TATTTGGGTTATATAATTCT+TGG + Chr6:114112719-114112738 MsG0680035897.01.T01:CDS 20.0%
!!! TGAAATATAATTTAGAACAG+AGG + Chr6:114117668-114117687 MsG0680035897.01.T01:intron 20.0%
!!! TGTTGTTTTTACTTTTTACA+CGG + Chr6:114115335-114115354 MsG0680035897.01.T01:intron 20.0%
!!! TTCACTATAGTTTTTATAAC+TGG + Chr6:114117415-114117434 MsG0680035897.01.T01:intron 20.0%
!!! TTCTATCTTGTACTTTTTTT+CGG + Chr6:114117123-114117142 MsG0680035897.01.T01:intron 20.0%
!!! TTTAATATTTGGCTTTGATA+AGG - Chr6:114112645-114112664 None:intergenic 20.0%
!!! TTTTATTACACTAAATGAGT+CGG - Chr6:114118212-114118231 None:intergenic 20.0%
!!! TTTTTTTTAACCATTGTACA+TGG + Chr6:114116744-114116763 MsG0680035897.01.T01:intron 20.0%
! AAAAATGACGAGTTAAACTA+AGG - Chr6:114113716-114113735 None:intergenic 25.0%
! AAATGATCCAAAATAAATGG+TGG - Chr6:114117198-114117217 None:intergenic 25.0%
! AACTTGAATGTGCAATATAT+GGG - Chr6:114113910-114113929 None:intergenic 25.0%
! AAGCGTTCAAAAAATGTTTA+TGG - Chr6:114118699-114118718 None:intergenic 25.0%
! AATATCATTCACTAATGGTA+TGG + Chr6:114116933-114116952 MsG0680035897.01.T01:intron 25.0%
! AATGTAAACCATACCTATAT+TGG + Chr6:114113965-114113984 MsG0680035897.01.T01:intron 25.0%
! AATTATATCACAAGCAATCT+TGG + Chr6:114113285-114113304 MsG0680035897.01.T01:intron 25.0%
! AATTCAGATTGAAGTTGAAA+TGG + Chr6:114112592-114112611 MsG0680035897.01.T01:CDS 25.0%
! AATTGTGAAAACAAATGGAT+TGG + Chr6:114118884-114118903 MsG0680035897.01.T01:CDS 25.0%
! AGAAAAATCCAATATAGGTA+TGG - Chr6:114113976-114113995 None:intergenic 25.0%
! ATAAGAAATAAAAGATGGTG+GGG + Chr6:114116604-114116623 MsG0680035897.01.T01:intron 25.0%
! ATGGGTTTATATAGGTTTAA+TGG + Chr6:114113873-114113892 MsG0680035897.01.T01:intron 25.0%
! ATGTGAAATATTGCACAAAT+TGG - Chr6:114113775-114113794 None:intergenic 25.0%
! ATGTTGAATGATAAAACCAT+TGG + Chr6:114116631-114116650 MsG0680035897.01.T01:intron 25.0%
! ATTAACCTGAATTTAAACTC+AGG - Chr6:114115009-114115028 None:intergenic 25.0%
! CAGATATTCATAGGAATATA+CGG + Chr6:114114927-114114946 MsG0680035897.01.T01:intron 25.0%
! CTCAAATGTAGAGAATTATA+TGG - Chr6:114113684-114113665 None:intergenic 25.0%
! GAATAAGAAATAAAAGATGG+TGG + Chr6:114116602-114116621 MsG0680035897.01.T01:intron 25.0%
! GCATATATATTATGATCCAA+AGG - Chr6:114118440-114118459 None:intergenic 25.0%
! GTTTGATGAAAAAAGGATAA+TGG - Chr6:114118464-114118483 None:intergenic 25.0%
! TAACTTGAATGTGCAATATA+TGG - Chr6:114113911-114113930 None:intergenic 25.0%
! TATTCCAACAAATGAAAACA+TGG + Chr6:114112895-114112914 MsG0680035897.01.T01:CDS 25.0%
! TGAATTTGATCAACAATGAT+GGG - Chr6:114112578-114112597 None:intergenic 25.0%
! TGGGTTTATATAGGTTTAAT+GGG + Chr6:114113874-114113893 MsG0680035897.01.T01:intron 25.0%
! TGTTTAATCTTGCTTTCAAT+AGG - Chr6:114115968-114115987 None:intergenic 25.0%
! TTTAATGTTGGAATTAGAGA+GGG - Chr6:114114514-114114533 None:intergenic 25.0%
!! AATGAAAAGTGTAGATTACA+TGG + Chr6:114117801-114117820 MsG0680035897.01.T01:intron 25.0%
!! ACATTCAAGTTACTTTATCT+AGG + Chr6:114113919-114113938 MsG0680035897.01.T01:intron 25.0%
!! AGATTTTGTATATGGGTATT+AGG + Chr6:114113001-114113020 MsG0680035897.01.T01:CDS 25.0%
!! ATGCGTTAGTGTTATATTTT+CGG - Chr6:114118786-114118805 None:intergenic 25.0%
!! ATGCTTGAGATTTTGTATAT+GGG + Chr6:114112994-114113013 MsG0680035897.01.T01:CDS 25.0%
!! GATTTTGTATATGGGTATTA+GGG + Chr6:114113002-114113021 MsG0680035897.01.T01:CDS 25.0%
!! TGTATTTTACTGATATCCTT+TGG + Chr6:114115547-114115566 MsG0680035897.01.T01:intron 25.0%
!! TTTATAAGAAGAAAGAGTGT+AGG + Chr6:114113029-114113048 MsG0680035897.01.T01:CDS 25.0%
!! TTTTAATGTTGGAATTAGAG+AGG - Chr6:114114515-114114534 None:intergenic 25.0%
!!! AACGAAGAAAGTACTTTTTT+AGG - Chr6:114117859-114117878 None:intergenic 25.0%
!!! ACACGGTAATTTTTTTATAG+TGG + Chr6:114115352-114115371 MsG0680035897.01.T01:intron 25.0%
!!! ACTAATCATTCGAGTTTTAT+AGG - Chr6:114115062-114115081 None:intergenic 25.0%
!!! AGTTACTTTGTTTTGTCTAA+TGG + Chr6:114113153-114113172 MsG0680035897.01.T01:intron 25.0%
!!! ATTATTAGGCCATTTTGAAT+GGG + Chr6:114113389-114113408 MsG0680035897.01.T01:intron 25.0%
!!! CTACATTTGAGTATTTTAGT+GGG - Chr6:114113656-114113675 None:intergenic 25.0%
!!! GTTGTTTTTAGAAAGAATGT+AGG + Chr6:114112917-114112936 MsG0680035897.01.T01:CDS 25.0%
!!! TAGTTTAACTCGTCATTTTT+AGG + Chr6:114113716-114113735 MsG0680035897.01.T01:intron 25.0%
!!! TATTATTAGGCCATTTTGAA+TGG + Chr6:114113388-114113407 MsG0680035897.01.T01:intron 25.0%
!!! TATTTTTTGTGGATTCTCTT+AGG + Chr6:114114084-114114103 MsG0680035897.01.T01:intron 25.0%
!!! TCTACATTTGAGTATTTTAG+TGG - Chr6:114113657-114113676 None:intergenic 25.0%
!!! TCTATCTTGTACTTTTTTTC+GGG + Chr6:114117124-114117143 MsG0680035897.01.T01:intron 25.0%
!!! TTATTAGAGTGTTGTACATT+TGG - Chr6:114113454-114113473 None:intergenic 25.0%
AAAGAACCTCGAGATATATT+TGG - Chr6:114118341-114118360 None:intergenic 30.0%
AAAGAGAGGAGAAAAAGTAA+CGG + Chr6:114114336-114114355 MsG0680035897.01.T01:intron 30.0%
AAATCTTTACCTCCATGTTA+GGG + Chr6:114112483-114112502 MsG0680035897.01.T01:CDS 30.0%
AAATTAAATCTGTTCCGTAG+AGG + Chr6:114117032-114117051 MsG0680035897.01.T01:intron 30.0%
AATAAGTGTGTTGAATAGGT+AGG + Chr6:114113424-114113443 MsG0680035897.01.T01:intron 30.0%
AATGAAATAAAGCCCTAACA+TGG - Chr6:114112498-114112517 None:intergenic 30.0%
ACACAATAAGTGTGTTGAAT+AGG + Chr6:114113420-114113439 MsG0680035897.01.T01:intron 30.0%
ACCTGTACAAATTATCATGA+TGG - Chr6:114114240-114114259 None:intergenic 30.0%
AGATCTCATGAAGAATATGT+TGG + Chr6:114115659-114115678 MsG0680035897.01.T01:intron 30.0%
AGGCAAATTGTGAAAACAAA+TGG + Chr6:114118879-114118898 MsG0680035897.01.T01:CDS 30.0%
ATATTATGATCCAAAGGACT+AGG - Chr6:114118434-114118453 None:intergenic 30.0%
CAACAACGAAAATTGATTGA+TGG + Chr6:114115864-114115883 MsG0680035897.01.T01:intron 30.0%
CATATACAAAATCTCAAGCA+TGG - Chr6:114112995-114113014 None:intergenic 30.0%
CTCCAAATAGACCTATAAAA+TGG - Chr6:114112760-114112779 None:intergenic 30.0%
CTGAATTTGATCAACAATGA+TGG - Chr6:114112579-114112598 None:intergenic 30.0%
CTTAACCTGAGTTTAAATTC+AGG + Chr6:114115001-114115020 MsG0680035897.01.T01:intron 30.0%
CTTATAATAATTACTCCTCG+CGG + Chr6:114116817-114116836 MsG0680035897.01.T01:intron 30.0%
GAAACACACTCTTTATCTTA+TGG + Chr6:114113102-114113121 MsG0680035897.01.T01:CDS 30.0%
GAATTTGATCAACAATGATG+GGG - Chr6:114112577-114112596 None:intergenic 30.0%
GACAATGCATAAAATATGCA+AGG - Chr6:114115398-114115417 None:intergenic 30.0%
GATTAAACATGTTGAACCAT+TGG + Chr6:114115979-114115998 MsG0680035897.01.T01:intron 30.0%
GATTAAGAGAGTGAAAAACT+TGG - Chr6:114116358-114116377 None:intergenic 30.0%
GTTTAACGTTTGTACCATAT+TGG + Chr6:114118363-114118382 MsG0680035897.01.T01:intron 30.0%
TATACGGCTATTAAAAAGTG+CGG + Chr6:114114943-114114962 MsG0680035897.01.T01:intron 30.0%
TCCACATAACAGATATTCAT+AGG + Chr6:114114918-114114937 MsG0680035897.01.T01:intron 30.0%
TCCTATGAATATCTGTTATG+TGG - Chr6:114114922-114114941 None:intergenic 30.0%
TTAAGAGAGAGAAAATGATG+TGG + Chr6:114116681-114116700 MsG0680035897.01.T01:intron 30.0%
TTAGGTATTCCCATTCAAAA+TGG - Chr6:114113401-114113420 None:intergenic 30.0%
TTATCCTTCTAAACAAAACC+AGG - Chr6:114115302-114115321 None:intergenic 30.0%
TTCAACACACTTATTGTGTT+AGG - Chr6:114113419-114113438 None:intergenic 30.0%
TTCGGTTCTTCTATATGTTA+CGG + Chr6:114117225-114117244 MsG0680035897.01.T01:intron 30.0%
TTGAAGACATTGAAATTGAG+AGG - Chr6:114114448-114114467 None:intergenic 30.0%
TTGATAAGGAAGTTATGTGA+AGG - Chr6:114112631-114112650 None:intergenic 30.0%
TTGCTTGTGATATAATTGAG+AGG - Chr6:114113282-114113301 None:intergenic 30.0%
TTTAGTACTTGTTTAGCACT+AGG - Chr6:114112806-114112825 None:intergenic 30.0%
! ACAACCATGTTTTCATTTGT+TGG - Chr6:114112902-114112921 None:intergenic 30.0%
! ACCATCATGATAATTTGTAC+AGG + Chr6:114114236-114114255 MsG0680035897.01.T01:intron 30.0%
! AGAAAACTTTTATCCACCAA+AGG - Chr6:114115566-114115585 None:intergenic 30.0%
! AGTAGATCCACCATTTATTT+TGG + Chr6:114117188-114117207 MsG0680035897.01.T01:intron 30.0%
! ATATATAATTTAGAACCGCG+AGG - Chr6:114116835-114116854 None:intergenic 30.0%
! ATTTTACTGATATCCTTTGG+TGG + Chr6:114115550-114115569 MsG0680035897.01.T01:intron 30.0%
! CATGCTTGAGATTTTGTATA+TGG + Chr6:114112993-114113012 MsG0680035897.01.T01:CDS 30.0%
! CTCCATTTTATAGGTCTATT+TGG + Chr6:114112755-114112774 MsG0680035897.01.T01:CDS 30.0%
! CTTAATTAAAAGCGTGTATG+TGG + Chr6:114118483-114118502 MsG0680035897.01.T01:intron 30.0%
! GCTACATGGATTAAAATGTA+TGG - Chr6:114115280-114115299 None:intergenic 30.0%
! GTATCTTTTGAACAATGTAG+AGG + Chr6:114113051-114113070 MsG0680035897.01.T01:CDS 30.0%
! TATCTTATGGCTACTGTTTT+TGG + Chr6:114113115-114113134 MsG0680035897.01.T01:CDS 30.0%
! TCCAAATTATACGACGTTTT+GGG + Chr6:114117878-114117897 MsG0680035897.01.T01:intron 30.0%
! TTCAATTTTATCCACTCCAA+TGG - Chr6:114116650-114116669 None:intergenic 30.0%
! TTCCAAATTATACGACGTTT+TGG + Chr6:114117877-114117896 MsG0680035897.01.T01:intron 30.0%
! TTGGATCATTTTATCCAGTT+CGG + Chr6:114117207-114117226 MsG0680035897.01.T01:intron 30.0%
! TTTAGGTTTACCTTTATCTC+TGG - Chr6:114117842-114117861 None:intergenic 30.0%
!! AACAAATGGATTGGATTTGT+TGG + Chr6:114118893-114118912 MsG0680035897.01.T01:CDS 30.0%
!! ATCTTATGGCTACTGTTTTT+GGG + Chr6:114113116-114113135 MsG0680035897.01.T01:CDS 30.0%
!! CGGAACAGATTTAATTTTGA+AGG - Chr6:114117029-114117048 None:intergenic 30.0%
!! GATTTAATTTTGAAGGCAGA+CGG - Chr6:114117022-114117041 None:intergenic 30.0%
!! TTACTTTGGTTCTCAGTTTA+TGG - Chr6:114114125-114114144 None:intergenic 30.0%
!!! CTTTGTTTTGTCTAATGGAT+TGG + Chr6:114113158-114113177 MsG0680035897.01.T01:intron 30.0%
!!! GTAATTTTTTTATAGTGGCC+CGG + Chr6:114115357-114115376 MsG0680035897.01.T01:intron 30.0%
!!! TAATTTTTTTATAGTGGCCC+GGG + Chr6:114115358-114115377 MsG0680035897.01.T01:intron 30.0%
AAAGATATCTTGCTAGCTAC+TGG + Chr6:114115781-114115800 MsG0680035897.01.T01:intron 35.0%
AACATATAGAAGAACCGAAC+TGG - Chr6:114117224-114117243 None:intergenic 35.0%
AACTGAGAGGAAACAATTGA+AGG + Chr6:114114417-114114436 MsG0680035897.01.T01:CDS 35.0%
ATACAAAATCTCAAGCATGG+AGG - Chr6:114112992-114113011 None:intergenic 35.0%
ATTCATCGCTCTTGAAACTA+AGG + Chr6:114118534-114118553 MsG0680035897.01.T01:intron 35.0%
ATTCTCCAGAAGTTGCATAA+GGG - Chr6:114117349-114117368 None:intergenic 35.0%
CAGAACGTAGGATTTACTAT+GGG + Chr6:114118827-114118846 MsG0680035897.01.T01:CDS 35.0%
CGTGTCTTGAATTTATGCTT+TGG - Chr6:114113240-114113259 None:intergenic 35.0%
CTAGGTTATCTATTGAGGAA+CGG - Chr6:114114568-114114587 None:intergenic 35.0%
GAAATCTTTACCTCCATGTT+AGG + Chr6:114112482-114112501 MsG0680035897.01.T01:CDS 35.0%
GAATGATAAAACCATTGGAG+TGG + Chr6:114116636-114116655 MsG0680035897.01.T01:intron 35.0%
GACGGAGATAGATTAAAAGT+TGG + Chr6:114118135-114118154 MsG0680035897.01.T01:intron 35.0%
GAGAAAGAGACTTTGGATAA+TGG + Chr6:114116163-114116182 MsG0680035897.01.T01:intron 35.0%
GAGACTTGGATCATTTGATT+TGG + Chr6:114116318-114116337 MsG0680035897.01.T01:intron 35.0%
GATCATTGAGATTACTCTCT+TGG - Chr6:114115526-114115545 None:intergenic 35.0%
GGAATTCAGAAGGTTTGAAA+GGG + Chr6:114113179-114113198 MsG0680035897.01.T01:intron 35.0%
GTAGCACAAGTGAAAATTTG+AGG + Chr6:114112681-114112700 MsG0680035897.01.T01:CDS 35.0%
GTCAACTAGGTTATCTATTG+AGG - Chr6:114114573-114114592 None:intergenic 35.0%
GTGGATGTCTATTTCAAAGT+TGG + Chr6:114118502-114118521 MsG0680035897.01.T01:intron 35.0%
GTGTTGGGAATTGAAAAAGT+GGG + Chr6:114116705-114116724 MsG0680035897.01.T01:intron 35.0%
GTTTCAACATTTGCAAGTTG+TGG + Chr6:114112869-114112888 MsG0680035897.01.T01:CDS 35.0%
TAACCATTGTACATGGTCTA+AGG + Chr6:114116751-114116770 MsG0680035897.01.T01:intron 35.0%
TACAAAATCTCAAGCATGGA+GGG - Chr6:114112991-114113010 None:intergenic 35.0%
TAGCACTAGGAATCATTGAA+AGG - Chr6:114112793-114112812 None:intergenic 35.0%
TATAGGCCAAATATATCTCG+AGG + Chr6:114118332-114118351 MsG0680035897.01.T01:intron 35.0%
TCAGAACGTAGGATTTACTA+TGG + Chr6:114118826-114118845 MsG0680035897.01.T01:CDS 35.0%
TCATTCCACAAGTACTTCTT+GGG + Chr6:114112954-114112973 MsG0680035897.01.T01:CDS 35.0%
TGAGAGAAACTAACATCATG+AGG - Chr6:114113321-114113340 None:intergenic 35.0%
TGCATAAAATATGCAAGGTC+CGG - Chr6:114115393-114115412 None:intergenic 35.0%
TGGAATTCAGAAGGTTTGAA+AGG + Chr6:114113178-114113197 MsG0680035897.01.T01:intron 35.0%
TTTCCTTAGACCATGTACAA+TGG - Chr6:114116757-114116776 None:intergenic 35.0%
TTTCTCTACAGATAGAGACT+TGG + Chr6:114116304-114116323 MsG0680035897.01.T01:intron 35.0%
! AAAGAGACTTTGGATAATGG+AGG + Chr6:114116166-114116185 MsG0680035897.01.T01:intron 35.0%
! AGAAAATGATGTGGAGTGTT+GGG + Chr6:114116690-114116709 MsG0680035897.01.T01:intron 35.0%
! AGGAATGCTAGAATTTTCAG+AGG + Chr6:114117312-114117331 MsG0680035897.01.T01:intron 35.0%
! AGTGTTGGGAATTGAAAAAG+TGG + Chr6:114116704-114116723 MsG0680035897.01.T01:intron 35.0%
! ATACGGCTATTAAAAAGTGC+GGG + Chr6:114114944-114114963 MsG0680035897.01.T01:intron 35.0%
! ATATTGCTGTTGAAGTTGTC+AGG + Chr6:114114467-114114486 MsG0680035897.01.T01:CDS 35.0%
! CAAAATCCTTTGTTATGTGC+AGG + Chr6:114117441-114117460 MsG0680035897.01.T01:intron 35.0%
! CTGCACATAACAAAGGATTT+TGG - Chr6:114117443-114117462 None:intergenic 35.0%
! CTTATACTTGTTACGTTGCT+TGG + Chr6:114118944-114118963 MsG0680035897.01.T01:CDS 35.0%
! GCTCTTTTATGCATTTGATC+TGG + Chr6:114117259-114117278 MsG0680035897.01.T01:intron 35.0%
! TACTAGTTTGCATAACTGAG+AGG + Chr6:114114404-114114423 MsG0680035897.01.T01:intron 35.0%
! TCTTTTGAACAATGTAGAGG+AGG + Chr6:114113054-114113073 MsG0680035897.01.T01:CDS 35.0%
! TGTTGAACACTGACTGTATT+TGG + Chr6:114117485-114117504 MsG0680035897.01.T01:intron 35.0%
! TTGTTTTCACAATTTGCCTC+TGG - Chr6:114118878-114118897 None:intergenic 35.0%
!! AAGAGACTTTGGATAATGGA+GGG + Chr6:114116167-114116186 MsG0680035897.01.T01:intron 35.0%
!! ACATTTTAATCCATGTAGCC+TGG + Chr6:114115281-114115300 MsG0680035897.01.T01:intron 35.0%
!! ATTGAAAAAGTGGGTGTTGA+AGG + Chr6:114116714-114116733 MsG0680035897.01.T01:intron 35.0%
!! CTAATGGATTGGAATTCAGA+AGG + Chr6:114113169-114113188 MsG0680035897.01.T01:intron 35.0%
!! GGATTGGATTTGTTGGAAAA+TGG + Chr6:114118900-114118919 MsG0680035897.01.T01:CDS 35.0%
!!! AATTTTTTTATAGTGGCCCG+GGG + Chr6:114115359-114115378 MsG0680035897.01.T01:intron 35.0%
!!! GAGCGATTTTTAATTTGCGA+CGG + Chr6:114118117-114118136 MsG0680035897.01.T01:intron 35.0%
!!! TAATCCTAGCTGTCTTGTTT+TGG - Chr6:114115217-114115236 None:intergenic 35.0%
!!! TACTTTTTTTCGGGCATCTT+TGG + Chr6:114117133-114117152 MsG0680035897.01.T01:intron 35.0%
AACATGTTGAACCATTGGAG+TGG + Chr6:114115984-114116003 MsG0680035897.01.T01:intron 40.0%
ACACAGAGAGAAAGAGACTT+TGG + Chr6:114116156-114116175 MsG0680035897.01.T01:intron 40.0%
ACAGAGATGCAGATAATCCA+TGG + Chr6:114118984-114119003 MsG0680035897.01.T01:CDS 40.0%
ACATGTTGAACCATTGGAGT+GGG + Chr6:114115985-114116004 MsG0680035897.01.T01:intron 40.0%
AGCATAAATTCAAGACACGC+TGG + Chr6:114113241-114113260 MsG0680035897.01.T01:intron 40.0%
ATGCCACAACTTGGGTAATT+TGG + Chr6:114117283-114117302 MsG0680035897.01.T01:intron 40.0%
ATGTCAAACAGCTTTCCTTC+TGG + Chr6:114117367-114117386 MsG0680035897.01.T01:intron 40.0%
CACAACTTGGGTAATTTGGA+AGG + Chr6:114117287-114117306 MsG0680035897.01.T01:intron 40.0%
CAGGAAGAATGATACCTCTA+CGG - Chr6:114117049-114117068 None:intergenic 40.0%
CATAAAATATGCAAGGTCCG+GGG - Chr6:114115391-114115410 None:intergenic 40.0%
CATTCTCCAGAAGTTGCATA+AGG - Chr6:114117350-114117369 None:intergenic 40.0%
CCAATTCCTGCACATAACAA+AGG - Chr6:114117450-114117469 None:intergenic 40.0%
CTAAACAAAACCAGGCTACA+TGG - Chr6:114115294-114115313 None:intergenic 40.0%
CTCATTCCACAAGTACTTCT+TGG + Chr6:114112953-114112972 MsG0680035897.01.T01:CDS 40.0%
CTTCCAAATTACCCAAGTTG+TGG - Chr6:114117289-114117308 None:intergenic 40.0%
CTTGGGTAATTTGGAAGGAT+AGG + Chr6:114117292-114117311 MsG0680035897.01.T01:intron 40.0%
GAAATAAAGCCCTAACATGG+AGG - Chr6:114112495-114112514 None:intergenic 40.0%
GAGAAAATGATGTGGAGTGT+TGG + Chr6:114116689-114116708 MsG0680035897.01.T01:intron 40.0%
GAGAGGATGTAGAAAAAGAG+AGG + Chr6:114114322-114114341 MsG0680035897.01.T01:intron 40.0%
GCATAAAATATGCAAGGTCC+GGG - Chr6:114115392-114115411 None:intergenic 40.0%
GCCCAAAACGTCGTATAATT+TGG - Chr6:114117882-114117901 None:intergenic 40.0%
GCTTTCAATAGGCTCATTGT+GGG - Chr6:114115957-114115976 None:intergenic 40.0%
GGTTATTGAAGATGAGATGG+AGG + Chr6:114116007-114116026 MsG0680035897.01.T01:intron 40.0%
GTCTTCTATTGAGTGACGAA+TGG + Chr6:114114786-114114805 MsG0680035897.01.T01:intron 40.0%
GTTGGAAAATGGAGTGATGA+GGG + Chr6:114118911-114118930 MsG0680035897.01.T01:CDS 40.0%
TACATGTGTCAGAGTCAACT+AGG - Chr6:114114586-114114605 None:intergenic 40.0%
TCAACCAAAACAAGACAGCT+AGG + Chr6:114115210-114115229 MsG0680035897.01.T01:intron 40.0%
TGCGTGTACGATATTCATCT+TGG + Chr6:114115172-114115191 MsG0680035897.01.T01:intron 40.0%
TGCTTTCAATAGGCTCATTG+TGG - Chr6:114115958-114115977 None:intergenic 40.0%
TGGGGTTATTGAAGATGAGA+TGG + Chr6:114116004-114116023 MsG0680035897.01.T01:intron 40.0%
TGTTGGAAAATGGAGTGATG+AGG + Chr6:114118910-114118929 MsG0680035897.01.T01:CDS 40.0%
TTGAACAATGTAGAGGAGGT+TGG + Chr6:114113058-114113077 MsG0680035897.01.T01:CDS 40.0%
TTTGGCAAATGGTGAGGAAT+TGG + Chr6:114117151-114117170 MsG0680035897.01.T01:intron 40.0%
! ACTTGCTTTAAACCACCAGA+AGG - Chr6:114117385-114117404 None:intergenic 40.0%
! CCTTTGTTATGTGCAGGAAT+TGG + Chr6:114117447-114117466 MsG0680035897.01.T01:intron 40.0%
! TATTTGGTGAGCATTCTCTC+TGG + Chr6:114117501-114117520 MsG0680035897.01.T01:intron 40.0%
!! CTTTGGTTCTCAGTTTATGG+AGG - Chr6:114114122-114114141 None:intergenic 40.0%
!! GAAATAAAAGATGGTGGGGT+AGG + Chr6:114116608-114116627 MsG0680035897.01.T01:intron 40.0%
!! TAGAGGTATCATTCTTCCTG+AGG + Chr6:114117049-114117068 MsG0680035897.01.T01:intron 40.0%
!!! GTAGCCTGGTTTTGTTTAGA+AGG + Chr6:114115295-114115314 MsG0680035897.01.T01:intron 40.0%
ACACGCTGGAGAAACTATTG+TGG + Chr6:114113255-114113274 MsG0680035897.01.T01:intron 45.0%
ACCAATCATGTAGCAACACG+TGG - Chr6:114116193-114116212 None:intergenic 45.0%
CAAATGGTGAGGAATTGGCT+TGG + Chr6:114117156-114117175 MsG0680035897.01.T01:intron 45.0%
CAAGGGAGGAATGAGGTATA+AGG - Chr6:114114271-114114290 None:intergenic 45.0%
CATGTTGAACCATTGGAGTG+GGG + Chr6:114115986-114116005 MsG0680035897.01.T01:intron 45.0%
CGTAATTGTGTCAGTGGTTG+TGG + Chr6:114117074-114117093 MsG0680035897.01.T01:intron 45.0%
CTCACACAAGTGCATATCCT+TGG - Chr6:114113628-114113647 None:intergenic 45.0%
CTCACTGCTTTCTGACAATC+CGG - Chr6:114114305-114114324 None:intergenic 45.0%
CTTATACCTCATTCCTCCCT+TGG + Chr6:114114269-114114288 MsG0680035897.01.T01:CDS 45.0%
CTTCAATAACCCCACTCCAA+TGG - Chr6:114115998-114116017 None:intergenic 45.0%
GAAGATGAGATGGAGGAAAG+AGG + Chr6:114116014-114116033 MsG0680035897.01.T01:intron 45.0%
GACAGTGCATATCAGAACGT+AGG + Chr6:114118815-114118834 MsG0680035897.01.T01:intron 45.0%
GAGTTCCCTTATGCAACTTC+TGG + Chr6:114117341-114117360 MsG0680035897.01.T01:intron 45.0%
GATCTGGTATGCCACAACTT+GGG + Chr6:114117275-114117294 MsG0680035897.01.T01:intron 45.0%
GATTGTCAGAAAGCAGTGAG+AGG + Chr6:114114305-114114324 MsG0680035897.01.T01:intron 45.0%
GGAATGAGGTATAAGGTGGA+AGG - Chr6:114114264-114114283 None:intergenic 45.0%
GGTTATCTATTGAGGAACGG+AGG - Chr6:114114565-114114584 None:intergenic 45.0%
TACACCTTGTACCTGGAAGA+TGG + Chr6:114117524-114117543 MsG0680035897.01.T01:intron 45.0%
TCAAACAGCTTTCCTTCTGG+TGG + Chr6:114117370-114117389 MsG0680035897.01.T01:intron 45.0%
TCATTCCTCCCTTGGAAAGA+CGG + Chr6:114114277-114114296 MsG0680035897.01.T01:CDS 45.0%
TGAAACAAGAGCCATCTTCC+AGG - Chr6:114117538-114117557 None:intergenic 45.0%
TGAACGACAATTGCATCCAG+AGG + Chr6:114118859-114118878 MsG0680035897.01.T01:CDS 45.0%
TGATCTGGTATGCCACAACT+TGG + Chr6:114117274-114117293 MsG0680035897.01.T01:intron 45.0%
TTCAATAGGCTCATTGTGGG+TGG - Chr6:114115954-114115973 None:intergenic 45.0%
TTTCGGGCATCTTTGGCAAA+TGG + Chr6:114117140-114117159 MsG0680035897.01.T01:intron 45.0%
! GCTCACGAGGACTTTTTACA+CGG + Chr6:114115435-114115454 MsG0680035897.01.T01:intron 45.0%
!! GATTCTCTTAGGAGCGTCAA+TGG + Chr6:114114095-114114114 MsG0680035897.01.T01:intron 45.0%
!! GTGTTCCCAAGAAGTACTTG+TGG - Chr6:114112962-114112981 None:intergenic 45.0%
!! AAAAAAAATTATGAAAAATA+TGG + Chr6:114114647-114114666 MsG0680035897.01.T01:intron 5.0%
!! ATAATAATAATAATAATTAG+TGG - Chr6:114113362-114113381 None:intergenic 5.0%
!! GTTTATAATTAAATTAAAAA+AGG - Chr6:114116536-114116555 None:intergenic 5.0%
!! TAAATAATTAATTGTATAAT+AGG + Chr6:114118028-114118047 MsG0680035897.01.T01:intron 5.0%
!!! TTTTTTATTTTTATTTTTTG+TGG + Chr6:114114073-114114092 MsG0680035897.01.T01:intron 5.0%
AATCCGGATCCGTCTTTCCA+AGG - Chr6:114114289-114114308 None:intergenic 50.0%
AGAGCCATCTTCCAGGTACA+AGG - Chr6:114117531-114117550 None:intergenic 50.0%
ATCCGGATCCGTCTTTCCAA+GGG - Chr6:114114288-114114307 None:intergenic 50.0%
CAAGTGTGCACCTAGTCCTT+TGG + Chr6:114118421-114118440 MsG0680035897.01.T01:intron 50.0%
CCAGTTGAGTTAAGCTCACG+AGG + Chr6:114115422-114115441 MsG0680035897.01.T01:intron 50.0%
CCTCGTGAGCTTAACTCAAC+TGG - Chr6:114115425-114115444 None:intergenic 50.0%
CTGACACAATTACGAGCCTC+AGG - Chr6:114117068-114117087 None:intergenic 50.0%
GAATCATGGTTGGGCAAAGC+TGG + Chr6:114116087-114116106 MsG0680035897.01.T01:intron 50.0%
GACAAGGCACGTGAATTGAC+AGG + Chr6:114116129-114116148 MsG0680035897.01.T01:intron 50.0%
GAGGCTCGTAATTGTGTCAG+TGG + Chr6:114117068-114117087 MsG0680035897.01.T01:intron 50.0%
GGCATCTTTGGCAAATGGTG+AGG + Chr6:114117145-114117164 MsG0680035897.01.T01:intron 50.0%
GGGAGGAATGAGGTATAAGG+TGG - Chr6:114114268-114114287 None:intergenic 50.0%
GTCAATTCACGTGCCTTGTC+TGG - Chr6:114116129-114116148 None:intergenic 50.0%
GTCTTTCCAAGGGAGGAATG+AGG - Chr6:114114278-114114297 None:intergenic 50.0%
TCTCTGGTACACCTTGTACC+TGG + Chr6:114117517-114117536 MsG0680035897.01.T01:intron 50.0%
! GCCACGTGTTGCTACATGAT+TGG + Chr6:114116189-114116208 MsG0680035897.01.T01:intron 50.0%
! TGTTGAAACTCTGCACCGAC+AGG + Chr6:114116055-114116074 MsG0680035897.01.T01:intron 50.0%
CCACGTGGCGAATCATGGTT+GGG + Chr6:114116078-114116097 MsG0680035897.01.T01:intron 55.0%
CTCCCTTGGAAAGACGGATC+CGG + Chr6:114114283-114114302 MsG0680035897.01.T01:CDS 55.0%
AAGGTCCGGGGTTCAAACCC+CGG - Chr6:114115379-114115398 None:intergenic 60.0%
ACAGGCCACGTGGCGAATCA+TGG + Chr6:114116073-114116092 MsG0680035897.01.T01:intron 60.0%
CCCAACCATGATTCGCCACG+TGG - Chr6:114116081-114116100 None:intergenic 60.0%
CGGATCCGTCTTTCCAAGGG+AGG - Chr6:114114285-114114304 None:intergenic 60.0%
GCCACGTGGCGAATCATGGT+TGG + Chr6:114116077-114116096 MsG0680035897.01.T01:intron 60.0%
GTGAGCTGCACAGCCAGACA+AGG + Chr6:114116113-114116132 MsG0680035897.01.T01:intron 60.0%
TGATTCGCCACGTGGCCTGT+CGG - Chr6:114116073-114116092 None:intergenic 60.0%
AGGTCCGGGGTTCAAACCCC+GGG - Chr6:114115378-114115397 None:intergenic 65.0%
GTGGCCCGGGGTTTGAACCC+CGG + Chr6:114115371-114115390 MsG0680035897.01.T01:intron 70.0%
! CTCTGCACCGACAGGCCACG+TGG + Chr6:114116063-114116082 MsG0680035897.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr6 gene 114112467 114119018 114112467 ID=MsG0680035897.01;Name=MsG0680035897.01
Chr6 mRNA 114112467 114119018 114112467 ID=MsG0680035897.01.T01;Parent=MsG0680035897.01;Name=MsG0680035897.01.T01;_AED=0.43;_eAED=0.43;_QI=0|0|0|1|1|1|4|0|336
Chr6 exon 114112467 114113137 114112467 ID=MsG0680035897.01.T01:exon:10057;Parent=MsG0680035897.01.T01
Chr6 exon 114114258 114114319 114114258 ID=MsG0680035897.01.T01:exon:10058;Parent=MsG0680035897.01.T01
Chr6 exon 114114410 114114488 114114410 ID=MsG0680035897.01.T01:exon:10059;Parent=MsG0680035897.01.T01
Chr6 exon 114118820 114119018 114118820 ID=MsG0680035897.01.T01:exon:10060;Parent=MsG0680035897.01.T01
Chr6 CDS 114112467 114113137 114112467 ID=MsG0680035897.01.T01:cds;Parent=MsG0680035897.01.T01
Chr6 CDS 114114258 114114319 114114258 ID=MsG0680035897.01.T01:cds;Parent=MsG0680035897.01.T01
Chr6 CDS 114114410 114114488 114114410 ID=MsG0680035897.01.T01:cds;Parent=MsG0680035897.01.T01
Chr6 CDS 114118820 114119018 114118820 ID=MsG0680035897.01.T01:cds;Parent=MsG0680035897.01.T01
Gene Sequence

>MsG0680035897.01.T01

ATGTTCATAGGTGGTGAAATCTTTACCTCCATGTTAGGGCTTTATTTCATTAGATCAAAGCTCAAAACTGATATCGATTCTTCTCATGCACGTTTTGCTTTTGCAAACCCCATCATTGTTGATCAAATTCAGATTGAAGTTGAAATGGTCACAAATTCTAACCTTCACATAACTTCCTTATCAAAGCCAAATATTAAATCACATGAATCATTGAGTAGCACAAGTGAAAATTTGAGGTATTTGTCTATGAAATATTTGGGTTATATAATTCTTGGTTACATTATAATTCTCCATTTTATAGGTCTATTTGGAGTGTCTCTTTACCTTTCAATGATTCCTAGTGCTAAACAAGTACTAAAAAACAAGGGTATAAATATGTCCACTTTCTCAATTTTTACTATAGTTTCAACATTTGCAAGTTGTGGATTTATTCCAACAAATGAAAACATGGTTGTTTTTAGAAAGAATGTAGGTCTTCTTCTTATTCTCATTCCACAAGTACTTCTTGGGAACACATTATACCCTCCATGCTTGAGATTTTGTATATGGGTATTAGGGAAATTTTATAAGAAGAAAGAGTGTAGGTATCTTTTGAACAATGTAGAGGAGGTTGGTTACAAACACTTGTTACATGAGAAACACACTCTTTATCTTATGGCTACTGTTTTTGGGTACCTTCCACCTTATACCTCATTCCTCCCTTGGAAAGACGGATCCGGATTGTCAGAAAGCATTTGCATAACTGAGAGGAAACAATTGAAGGAAGATCCTCTCAATTTCAATGTCTTCAATATTGCTGTTGAAGTTGTCAGTGCATATCAGAACGTAGGATTTACTATGGGATACAGTTGTGAACGACAATTGCATCCAGAGGCAAATTGTGAAAACAAATGGATTGGATTTGTTGGAAAATGGAGTGATGAGGGTAAGATCATTCTTATACTTGTTACGTTGCTTGGAAGACTCAAGAGATTCAACAGAGATGCAGATAATCCATGGAAACTTCTCTGA
Protein sequence

>MsG0680035897.01.T01

MFIGGEIFTSMLGLYFIRSKLKTDIDSSHARFAFANPIIVDQIQIEVEMVTNSNLHITSLSKPNIKSHESLSSTSENLRYLSMKYLGYIILGYIIILHFIGLFGVSLYLSMIPSAKQVLKNKGINMSTFSIFTIVSTFASCGFIPTNENMVVFRKNVGLLLILIPQVLLGNTLYPPCLRFCIWVLGKFYKKKECRYLLNNVEEVGYKHLLHEKHTLYLMATVFGYLPPYTSFLPWKDGSGLSESICITERKQLKEDPLNFNVFNIAVEVVSAYQNVGFTMGYSCERQLHPEANCENKWIGFVGKWSDEGKIILILVTLLGRLKRFNRDADNPWKLL*