AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040414.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040414.01.T01 MTR_7g090300 93.225 369 25 0 1 369 1 369 0.0 711
MsG0780040414.01.T01 MTR_7g490350 89.160 369 40 0 1 369 1 369 0.0 676
MsG0780040414.01.T01 MTR_7g490330 69.780 364 65 2 6 369 7 325 0.0 506
MsG0780040414.01.T01 MTR_5g091980 70.879 364 59 3 6 369 7 323 1.18e-180 504
MsG0780040414.01.T01 MTR_2g087780 52.273 352 155 5 28 369 47 395 7.25e-117 345
MsG0780040414.01.T01 MTR_4g050190 51.765 340 153 5 38 369 55 391 8.91e-114 337
MsG0780040414.01.T01 MTR_7g090310 43.377 385 201 7 1 368 1 385 2.74e-106 318
MsG0780040414.01.T01 MTR_2g099030 49.844 321 151 4 53 364 82 401 1.32e-105 317
MsG0780040414.01.T01 MTR_7g090320 47.590 332 161 6 50 368 55 386 1.81e-104 313
MsG0780040414.01.T01 MTR_4g112670 39.812 319 165 5 53 367 39 334 5.88e-74 233
MsG0780040414.01.T01 MTR_4g112650 36.314 369 189 8 1 363 1 329 9.05e-70 222
MsG0780040414.01.T01 MTR_2g058450 40.557 323 162 5 52 369 39 336 1.36e-68 219
MsG0780040414.01.T01 MTR_4g112630 37.037 324 162 4 52 368 37 325 9.09e-68 217
MsG0780040414.01.T01 MTR_4g112620 32.915 319 151 3 53 368 42 300 2.50e-53 179
MsG0780040414.01.T01 MTR_8g074270 33.516 364 208 13 5 364 28 361 1.67e-42 152
MsG0780040414.01.T01 MTR_2g058410 34.646 254 141 3 114 366 1 230 3.71e-41 145
MsG0780040414.01.T01 MTR_8g074170 34.899 298 169 8 5 299 28 303 7.40e-40 145
MsG0780040414.01.T01 MTR_8g074210 30.814 344 195 11 29 364 53 361 3.00e-36 135
MsG0780040414.01.T01 MTR_0003s0530 35.294 204 110 3 158 361 2 183 1.06e-33 124
MsG0780040414.01.T01 MTR_2g042420 26.757 370 244 9 2 369 5 349 6.27e-29 115
MsG0780040414.01.T01 MTR_2g042370 27.907 387 231 13 1 369 1 357 1.04e-27 112
MsG0780040414.01.T01 MTR_2g042430 28.435 313 198 8 54 365 77 364 1.96e-27 111
MsG0780040414.01.T01 MTR_1g075865 42.453 106 60 1 162 267 7 111 1.34e-23 95.1
MsG0780040414.01.T01 MTR_4g112840 47.778 90 47 0 191 280 63 152 1.19e-22 94.0
MsG0780040414.01.T01 MTR_8g074320 37.692 130 76 3 111 237 95 222 6.49e-18 82.0
MsG0780040414.01.T01 MTR_2g058430 43.038 79 45 0 105 183 52 130 5.45e-14 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040414.01.T01 AT3G57030 63.056 360 130 3 13 369 15 374 4.65e-163 461
MsG0780040414.01.T01 AT1G08470 53.824 340 147 4 37 369 53 389 3.35e-120 353
MsG0780040414.01.T01 AT5G22020 51.895 343 151 5 36 369 58 395 6.57e-118 347
MsG0780040414.01.T01 AT5G22020 51.895 343 151 5 36 369 58 395 6.57e-118 347
MsG0780040414.01.T01 AT5G22020 51.895 343 151 5 36 369 58 395 6.57e-118 347
MsG0780040414.01.T01 AT3G57010 47.671 365 180 6 5 366 11 367 3.26e-109 325
MsG0780040414.01.T01 AT2G41300 52.581 310 142 3 59 366 84 390 6.07e-109 325
MsG0780040414.01.T01 AT3G57020 46.341 369 190 6 1 366 3 366 5.06e-108 321
MsG0780040414.01.T01 AT2G41290 51.786 336 151 6 44 369 42 376 2.78e-107 320
MsG0780040414.01.T01 AT3G57020 44.986 369 181 6 1 366 3 352 2.17e-101 304
MsG0780040414.01.T01 AT3G59530 45.921 331 158 5 43 364 74 392 1.60e-97 296
MsG0780040414.01.T01 AT3G59530 45.921 331 158 5 43 364 74 392 1.60e-97 296
MsG0780040414.01.T01 AT3G59530 45.921 331 158 5 43 364 74 392 1.60e-97 296
MsG0780040414.01.T01 AT1G74020 39.441 322 158 7 53 369 38 327 1.01e-63 206
MsG0780040414.01.T01 AT1G74010 38.509 322 160 8 53 369 37 325 8.31e-61 199
MsG0780040414.01.T01 AT1G74000 36.923 325 164 9 52 369 39 329 2.48e-57 190
MsG0780040414.01.T01 AT3G51420 30.033 303 180 8 29 318 43 326 9.34e-32 123
MsG0780040414.01.T01 AT3G51440 32.353 272 162 7 29 297 43 295 1.14e-31 123
MsG0780040414.01.T01 AT3G51430 30.795 302 177 10 29 318 43 324 1.49e-30 120
MsG0780040414.01.T01 AT3G51430 30.363 303 179 8 29 318 43 326 3.10e-30 119
MsG0780040414.01.T01 AT3G51450 30.556 288 168 9 29 313 43 301 7.51e-28 112

Find 104 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAAAGATTATTGATGTTTA+TGG 0.179399 7:-77203447 MsG0780040414.01.T01:three_prime_UTR
GAATTGTCTTTAGACTTATT+TGG 0.197192 7:-77203532 MsG0780040414.01.T01:three_prime_UTR
TTAACTTAGGAGAGTTAATT+AGG 0.222998 7:-77203501 MsG0780040414.01.T01:three_prime_UTR
GAAATTCAGAAGGGCAGTTT+TGG 0.258450 7:-77203880 MsG0780040414.01.T01:CDS
CAAAGATGGTTCATTTCTTC+TGG 0.289224 7:-77204011 MsG0780040414.01.T01:CDS
ATTCTGAGGCTTTGGCTTCA+TGG 0.293429 7:-77203965 MsG0780040414.01.T01:CDS
TCTTCCCTTCACAATCTTCC+AGG 0.315508 7:+77203687 None:intergenic
GAAGACATCCACTTCGTAAA+AGG 0.316670 7:+77203833 None:intergenic
TAGCCGAAACCTCGATTTGC+AGG 0.335341 7:-77203988 MsG0780040414.01.T01:CDS
CATATGCTTGTAACTCTTAG+TGG 0.361968 7:-77204130 MsG0780040414.01.T01:CDS
AGTGGTGAAGTTACCTTCTC+TGG 0.362490 7:+77204855 None:intergenic
TTTGCAGGATTCTGAGGCTT+TGG 0.376258 7:-77203973 MsG0780040414.01.T01:CDS
GAAGCCGTTGCAAGCGTTGT+TGG 0.400226 7:-77203768 MsG0780040414.01.T01:CDS
CTTTCACTTCACCAATGACT+TGG 0.405228 7:-77204930 MsG0780040414.01.T01:CDS
AGTGGATGTCTTCTAATCTC+TGG 0.412498 7:-77203823 MsG0780040414.01.T01:CDS
CTCAACGTCGTAGGACCTGC+AGG 0.415420 7:-77204995 MsG0780040414.01.T01:CDS
AATCCTGCAAATCGAGGTTT+CGG 0.418573 7:+77203985 None:intergenic
TTGCTTAAAGCAACACCATT+GGG 0.429285 7:+77204031 None:intergenic
TTGCTGTCACAAGTTCCAAT+AGG 0.432694 7:-77207761 MsG0780040414.01.T01:intron
TGAATTTCTCCTTATATTGT+CGG 0.434223 7:+77203895 None:intergenic
CTTATATTGTCGGGAAAACC+TGG 0.434775 7:+77203905 None:intergenic
ATTGAATGAGGTGAAAATAA+TGG 0.436574 7:+77207977 None:intergenic
CCGGAGTTGGAGTATATTTG+TGG 0.436645 7:-77205085 MsG0780040414.01.T01:CDS
TTCACTGATGTCCAAGTCAT+TGG 0.437367 7:+77204919 None:intergenic
GTATCGACTTGGCCAACATT+AGG 0.446245 7:+77203941 None:intergenic
CAAGTTCAGTTTACCAGAGA+AGG 0.447117 7:-77204868 MsG0780040414.01.T01:intron
TACTCCAACTCCGGTGCGAA+TGG 0.448701 7:+77205094 None:intergenic
GCTATAAAGCTGAGTGATGA+AGG 0.452061 7:-77203725 MsG0780040414.01.T01:CDS
GAATTTCTCCTTATATTGTC+GGG 0.453954 7:+77203896 None:intergenic
TGGCTTCATGGACCTAATGT+TGG 0.454561 7:-77203953 MsG0780040414.01.T01:CDS
GGTGTTGCTTTAAGCAAAGA+TGG 0.456261 7:-77204025 MsG0780040414.01.T01:CDS
TATATTTCTGATGCCTACCT+TGG 0.457019 7:-77205019 MsG0780040414.01.T01:CDS
TTAGATGAGTGGAGGAAAAG+TGG 0.458175 7:+77208052 None:intergenic
TTCATGTTTGTTTAGATGAG+TGG 0.459716 7:+77208041 None:intergenic
ACTCTCCGGCCCAACGGCTC+CGG 0.460954 7:+77207878 None:intergenic
CCTCGATTTGCAGGATTCTG+AGG 0.468038 7:-77203979 MsG0780040414.01.T01:CDS
GCGTCCATTCGCACCGGAGT+TGG 0.475804 7:-77205098 MsG0780040414.01.T01:CDS
TGGAGAGTGTAGTTTGTTTG+CGG 0.475880 7:+77208094 None:intergenic
AAGAGAAAGATGGAAAACTT+TGG 0.476666 7:-77203640 MsG0780040414.01.T01:CDS
TGGAGGTTATTCTTCGATCC+AGG 0.480959 7:+77207924 None:intergenic
AGGGGAAATATTAGAAAGCC+TGG 0.482098 7:-77203705 MsG0780040414.01.T01:CDS
TTCGATCCAGGAATGGAAAC+CGG 0.482510 7:+77207936 None:intergenic
AAACTATAAACACCAATGTA+AGG 0.492649 7:+77203599 None:intergenic
CGTCACCGGAGCCGTTGGGC+CGG 0.493433 7:-77207883 MsG0780040414.01.T01:CDS
GTCCTACGACGTTGAGGCCA+AGG 0.495996 7:+77205002 None:intergenic
CAAGTCATTGGTGAAGTGAA+AGG 0.503899 7:+77204931 None:intergenic
CCGTACACTGGCGTGGCGGA+TGG 0.506485 7:-77207828 MsG0780040414.01.T01:CDS
GAAGTAAAGGTCTTATTAAG+TGG 0.510585 7:-77204064 MsG0780040414.01.T01:CDS
TAAACGTCACCGGAGCCGTT+GGG 0.514621 7:-77207887 MsG0780040414.01.T01:CDS
GTGGATGTCTTCTAATCTCT+GGG 0.517275 7:-77203822 MsG0780040414.01.T01:CDS
CGGAGTTGGAGTATATTTGT+GGG 0.518755 7:-77205084 MsG0780040414.01.T01:CDS
TTTGCTTAAAGCAACACCAT+TGG 0.519201 7:+77204030 None:intergenic
CCATCCGCCACGCCAGTGTA+CGG 0.522937 7:+77207828 None:intergenic
GAAGTGGTGAAGTCAGCAAA+TGG 0.523294 7:+77208074 None:intergenic
AAGATTATTGATGTTTATGG+AGG 0.528465 7:-77203444 MsG0780040414.01.T01:three_prime_UTR
TATATTTGTGGGAGGCCACT+AGG 0.529369 7:-77205073 MsG0780040414.01.T01:CDS
GAGTGGAGGAAAAGTGGAAG+TGG 0.536761 7:+77208058 None:intergenic
ACTCTTAGTGGAGACAAGAC+TGG 0.538861 7:-77204118 MsG0780040414.01.T01:CDS
AGTGAAGTGGAAGAGAAAGA+TGG 0.540337 7:-77203650 MsG0780040414.01.T01:CDS
AGCTTTATAGCTGCAGCATG+AGG 0.541139 7:+77203737 None:intergenic
AATGGTGATGGGCCGTACAC+TGG 0.541935 7:-77207840 MsG0780040414.01.T01:CDS
TAAGTCGACTAAAGAAGTAA+AGG 0.548933 7:-77204077 MsG0780040414.01.T01:CDS
GAAAGATGGAAAACTTTGGA+TGG 0.549433 7:-77203636 MsG0780040414.01.T01:CDS
ATTGAAGTTCATCAGTGAAG+TGG 0.549801 7:-77203663 MsG0780040414.01.T01:CDS
AAGTCATTGGTGAAGTGAAA+GGG 0.553850 7:+77204932 None:intergenic
GTTATTCTTCGATCCAGGAA+TGG 0.556853 7:+77207929 None:intergenic
TTATCAAACTTTAGTCCTAG+TGG 0.560456 7:+77205058 None:intergenic
CTAAACGTCACCGGAGCCGT+TGG 0.562202 7:-77207888 MsG0780040414.01.T01:CDS
TCAACGTCGTAGGACCTGCA+GGG 0.563338 7:-77204994 MsG0780040414.01.T01:CDS
CATTGGTGAAGTGAAAGGGC+TGG 0.572810 7:+77204936 None:intergenic
ACACTGGCGTGGCGGATGGT+CGG 0.573856 7:-77207824 MsG0780040414.01.T01:CDS
ATGTTTGTTTAGATGAGTGG+AGG 0.577121 7:+77208044 None:intergenic
GGGAAGGAGAGGAACGTGGT+TGG 0.580741 7:-77207791 MsG0780040414.01.T01:CDS
CTATAAAGCTGAGTGATGAA+GGG 0.586876 7:-77203724 MsG0780040414.01.T01:CDS
ATTTGAAACATGCGTGCACG+AGG 0.588862 7:+77208121 None:intergenic
GAACAGCAAAAGTATCGACT+TGG 0.589428 7:+77203930 None:intergenic
CCACAAATATACTCCAACTC+CGG 0.590022 7:+77205085 None:intergenic
TCAGGTAGCAACTGAAGCTG+AGG 0.591033 7:-77204960 MsG0780040414.01.T01:CDS
AAATGGGAAGGAGAGGAACG+TGG 0.596866 7:-77207795 MsG0780040414.01.T01:CDS
GTCGCCAACAACGCTTGCAA+CGG 0.597981 7:+77203764 None:intergenic
CGTTTAGTAACTTAGCAGCA+TGG 0.599980 7:+77207904 None:intergenic
CAACGTCGTAGGACCTGCAG+GGG 0.602016 7:-77204993 MsG0780040414.01.T01:CDS
AATATAAGGAGAAATTCAGA+AGG 0.602446 7:-77203890 MsG0780040414.01.T01:CDS
GAAAGCCTGGAAGATTGTGA+AGG 0.604737 7:-77203692 MsG0780040414.01.T01:CDS
AGCTTCAGTTGCTACCTGAG+TGG 0.606041 7:+77204964 None:intergenic
CTGTGTGCGTCCATTCGCAC+CGG 0.607037 7:-77205104 MsG0780040414.01.T01:CDS
TATAAAGCTGAGTGATGAAG+GGG 0.611274 7:-77203723 MsG0780040414.01.T01:CDS
CTGCAGGTCCTACGACGTTG+AGG 0.627691 7:+77204996 None:intergenic
AACAAGACTCTCCGGCCCAA+CGG 0.631984 7:+77207872 None:intergenic
CCTCAGAATCCTGCAAATCG+AGG 0.632523 7:+77203979 None:intergenic
TGATGGGCCGTACACTGGCG+TGG 0.634372 7:-77207835 MsG0780040414.01.T01:CDS
TCAGTGTTAATGCCTTACAT+TGG 0.635695 7:-77203611 MsG0780040414.01.T01:CDS
TACCTTGGCCTCAACGTCGT+AGG 0.642314 7:-77205004 MsG0780040414.01.T01:CDS
GCTAAGTTACTAAACGTCAC+CGG 0.644658 7:-77207897 MsG0780040414.01.T01:CDS
AAAGCCTGGAAGATTGTGAA+GGG 0.647318 7:-77203691 MsG0780040414.01.T01:CDS
CAGGTAGCAACTGAAGCTGA+GGG 0.648267 7:-77204959 MsG0780040414.01.T01:CDS
AGTTGGAGTATATTTGTGGG+AGG 0.653488 7:-77205081 MsG0780040414.01.T01:CDS
TACGACGTTGAGGCCAAGGT+AGG 0.668648 7:+77205006 None:intergenic
TTAGTGGAGACAAGACTGGA+CGG 0.686980 7:-77204114 MsG0780040414.01.T01:CDS
TTTGAAACATGCGTGCACGA+GGG 0.689300 7:+77208122 None:intergenic
ATATAAGGAGAAATTCAGAA+GGG 0.701748 7:-77203889 MsG0780040414.01.T01:CDS
AACGTCGTAGGACCTGCAGG+GGG 0.727874 7:-77204992 MsG0780040414.01.T01:CDS
TGGGCCGTACACTGGCGTGG+CGG 0.729607 7:-77207832 MsG0780040414.01.T01:CDS
TTAGTAACTTAGCAGCATGG+AGG 0.737177 7:+77207907 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATGGAAATAATTTAAA+TGG - Chr7:77205363-77205382 MsG0780040414.01.T01:intron 10.0%
!!! AAATTATTTCCATTTTTTTA+TGG + Chr7:77205360-77205379 None:intergenic 10.0%
!!! AATGAAAAATTAGAAATTTT+AGG + Chr7:77204736-77204755 None:intergenic 10.0%
!!! ATGAAAAATTAGAAATTTTA+GGG + Chr7:77204735-77204754 None:intergenic 10.0%
!!! TACTTTTAAATACAATTAAA+AGG + Chr7:77204390-77204409 None:intergenic 10.0%
!!! TTAAAGTGTTAAATTAAAAT+TGG + Chr7:77204073-77204092 None:intergenic 10.0%
!!! TTCTTTATTTAATTTATGTT+TGG - Chr7:77204002-77204021 MsG0780040414.01.T01:CDS 10.0%
!!! TTTTTGTTCTAAAAAATTTA+AGG - Chr7:77203893-77203912 MsG0780040414.01.T01:CDS 10.0%
!! AAAATCATTATCCAATTAAA+TGG + Chr7:77205449-77205468 None:intergenic 15.0%
!! AAAATTATTTGTTTACTCAT+TGG - Chr7:77203862-77203881 MsG0780040414.01.T01:CDS 15.0%
!! AAACAAAATAATCAGTTATA+TGG + Chr7:77206352-77206371 None:intergenic 15.0%
!! AGTTTACATTTATTAAAACA+TGG + Chr7:77205726-77205745 None:intergenic 15.0%
!! ATAAAGATTATTGATGTTTA+TGG - Chr7:77208117-77208136 MsG0780040414.01.T01:five_prime_UTR 15.0%
!! TAAAAAATAATTAATAGTGG+TGG + Chr7:77205284-77205303 None:intergenic 15.0%
!! TATTCTTAACATAAATCAAT+AGG + Chr7:77207120-77207139 None:intergenic 15.0%
!!! AAACAAATAATTTTAAAACC+TGG + Chr7:77203856-77203875 None:intergenic 15.0%
!!! GTAATAGTAATATTCATTTT+TGG - Chr7:77203825-77203844 MsG0780040414.01.T01:CDS 15.0%
!!! TAATTTTACTCTAAATAACA+TGG - Chr7:77205746-77205765 MsG0780040414.01.T01:intron 15.0%
!! AAAGTTAACAAATCTTTAGT+TGG + Chr7:77206979-77206998 None:intergenic 20.0%
!! AAATAAGAAGGAGAAATTAA+TGG - Chr7:77204840-77204859 MsG0780040414.01.T01:intron 20.0%
!! AAGTTAACAAATCTTTAGTT+GGG + Chr7:77206978-77206997 None:intergenic 20.0%
!! AGTGTTAACTTAAAAACTAT+AGG + Chr7:77207090-77207109 None:intergenic 20.0%
!! ATACAATTAAAAGGATAGTT+TGG + Chr7:77204381-77204400 None:intergenic 20.0%
!! CTAAAGTTTGATAAGAAAAA+TGG - Chr7:77206515-77206534 MsG0780040414.01.T01:intron 20.0%
!! GATTGAAGAAAATAATATCA+AGG - Chr7:77207249-77207268 MsG0780040414.01.T01:intron 20.0%
!! GTGTTAACTTAAAAACTATA+GGG + Chr7:77207089-77207108 None:intergenic 20.0%
!! TCAAAATCCTCTATATTTAA+TGG - Chr7:77204099-77204118 MsG0780040414.01.T01:CDS 20.0%
!! TCAGAATTGTTTAAATGAAA+AGG + Chr7:77206831-77206850 None:intergenic 20.0%
!! TGAATATTACTATTACCTAT+TGG + Chr7:77203821-77203840 None:intergenic 20.0%
!! TGTTAACTTAAAAACTATAG+GGG + Chr7:77207088-77207107 None:intergenic 20.0%
!! TTCACATTTGTAACATTAAA+TGG + Chr7:77206890-77206909 None:intergenic 20.0%
!!! ACAAGATTGCTTTATTTTTA+CGG + Chr7:77207003-77207022 None:intergenic 20.0%
!!! AGAAATTTTGATCTATATGT+TGG - Chr7:77207391-77207410 MsG0780040414.01.T01:intron 20.0%
!!! GATGTAAATTGATTTATGTT+TGG - Chr7:77204274-77204293 MsG0780040414.01.T01:intron 20.0%
!!! TAATTTTTCATTCTTTGTGT+TGG - Chr7:77204744-77204763 MsG0780040414.01.T01:intron 20.0%
!!! TTTGGATTAACTTTTAACTT+AGG - Chr7:77208050-77208069 MsG0780040414.01.T01:five_prime_UTR 20.0%
! AAACTATAAACACCAATGTA+AGG + Chr7:77207968-77207987 None:intergenic 25.0%
! AAGATGAAAAAGAAGATCAT+GGG - Chr7:77205020-77205039 MsG0780040414.01.T01:CDS 25.0%
! AAGATTATTGATGTTTATGG+AGG - Chr7:77208120-77208139 MsG0780040414.01.T01:five_prime_UTR 25.0%
! AATATAAGGAGAAATTCAGA+AGG - Chr7:77207674-77207693 MsG0780040414.01.T01:intron 25.0%
! ATAGACAAATATTATCATGC+TGG + Chr7:77207328-77207347 None:intergenic 25.0%
! ATATAAGGAGAAATTCAGAA+GGG - Chr7:77207675-77207694 MsG0780040414.01.T01:intron 25.0%
! ATCATTATCCAATTAAATGG+TGG + Chr7:77205446-77205465 None:intergenic 25.0%
! ATTGAATGAGGTGAAAATAA+TGG + Chr7:77203590-77203609 None:intergenic 25.0%
! CCAGATCTAAAAAAATAAGA+AGG - Chr7:77204828-77204847 MsG0780040414.01.T01:intron 25.0%
! CTCTTTAGTGTCTTAAAATA+CGG + Chr7:77205934-77205953 None:intergenic 25.0%
! GAATTGTCTTTAGACTTATT+TGG - Chr7:77208032-77208051 MsG0780040414.01.T01:exon 25.0%
! GTTAACTTAAAAACTATAGG+GGG + Chr7:77207087-77207106 None:intergenic 25.0%
! GTTCATACTCAATAATAATG+TGG + Chr7:77206782-77206801 None:intergenic 25.0%
! GTTCTTGTCTTATGAAAAAT+TGG - Chr7:77208092-77208111 MsG0780040414.01.T01:five_prime_UTR 25.0%
! TAATACTTTGTAGGTGATAA+AGG + Chr7:77205530-77205549 None:intergenic 25.0%
! TGAATTTATCACTCTCTAAA+TGG + Chr7:77204131-77204150 None:intergenic 25.0%
! TGAATTTCTCCTTATATTGT+CGG + Chr7:77207672-77207691 None:intergenic 25.0%
! TGGAAATAATTTAAATGGAG+AGG - Chr7:77205368-77205387 MsG0780040414.01.T01:intron 25.0%
! TGTAAACTATCTTTCTTCAA+GGG + Chr7:77205985-77206004 None:intergenic 25.0%
! TTAACTTAGGAGAGTTAATT+AGG - Chr7:77208063-77208082 MsG0780040414.01.T01:five_prime_UTR 25.0%
!! TATCACCTACAAAGTATTAA+TGG - Chr7:77205531-77205550 MsG0780040414.01.T01:intron 25.0%
!! TTCTTGAATTCAATTTTGTG+TGG + Chr7:77205068-77205087 None:intergenic 25.0%
!!! ACATTAAATGGATTGAATGT+TGG + Chr7:77206878-77206897 None:intergenic 25.0%
!!! ACTGCATTTATTTCTTTTGA+CGG + Chr7:77204599-77204618 None:intergenic 25.0%
!!! AGTCTTGTTTTTGATAGTAA+TGG - Chr7:77203706-77203725 MsG0780040414.01.T01:CDS 25.0%
!!! CCTTCTTATTTTTTTAGATC+TGG + Chr7:77204831-77204850 None:intergenic 25.0%
!!! CTGTGTTGTTTACAATTTTT+TGG - Chr7:77204997-77205016 MsG0780040414.01.T01:CDS 25.0%
!!! GAGTTTGAGATAATTGATTT+TGG - Chr7:77204237-77204256 MsG0780040414.01.T01:intron 25.0%
!!! TGATTTTAGTAAAGTTAGCT+AGG - Chr7:77205462-77205481 MsG0780040414.01.T01:intron 25.0%
!!! TTTTATGAGTTGATGTTGTT+TGG - Chr7:77204318-77204337 MsG0780040414.01.T01:intron 25.0%
!!! TTTTTGATAGTAATGGTGAT+GGG - Chr7:77203713-77203732 MsG0780040414.01.T01:CDS 25.0%
AAACTTCATTATTCTCTCTC+TGG + Chr7:77204899-77204918 None:intergenic 30.0%
AACTTCATTATTCTCTCTCT+GGG + Chr7:77204898-77204917 None:intergenic 30.0%
AAGAGAAAGATGGAAAACTT+TGG - Chr7:77207924-77207943 MsG0780040414.01.T01:CDS 30.0%
ACCAACAAATATGCAGTTTA+TGG - Chr7:77206029-77206048 MsG0780040414.01.T01:intron 30.0%
ATGGTCGAGAAAATAAATTG+AGG - Chr7:77204949-77204968 MsG0780040414.01.T01:CDS 30.0%
ATGGTTAACTATGTTGTATG+AGG - Chr7:77207167-77207186 MsG0780040414.01.T01:intron 30.0%
CATAGTTAACCATTCCAAAA+CGG + Chr7:77207160-77207179 None:intergenic 30.0%
CTGTAAACTATCTTTCTTCA+AGG + Chr7:77205986-77206005 None:intergenic 30.0%
GAAAACTGTGCAATTATCTT+AGG - Chr7:77207271-77207290 MsG0780040414.01.T01:intron 30.0%
GAAGATGAAAAAGAAGATCA+TGG - Chr7:77205019-77205038 MsG0780040414.01.T01:CDS 30.0%
GAATAATTAGCTCACAACAT+TGG + Chr7:77205963-77205982 None:intergenic 30.0%
GAATTTCTCCTTATATTGTC+GGG + Chr7:77207671-77207690 None:intergenic 30.0%
GGAGATACACCATAAAAAAA+TGG - Chr7:77205348-77205367 MsG0780040414.01.T01:intron 30.0%
GTAAGGTAACTTCAAAAGTT+TGG + Chr7:77205614-77205633 None:intergenic 30.0%
GTAGCTTCCATTAAATATAG+AGG + Chr7:77204109-77204128 None:intergenic 30.0%
GTATTGTTTCAAGAAATCGT+AGG + Chr7:77207059-77207078 None:intergenic 30.0%
TAAGTCGACTAAAGAAGTAA+AGG - Chr7:77207487-77207506 MsG0780040414.01.T01:intron 30.0%
TATGAGTTAGAGTAATGTCA+TGG + Chr7:77206380-77206399 None:intergenic 30.0%
TCCATAAACTGCATATTTGT+TGG + Chr7:77206033-77206052 None:intergenic 30.0%
TGAGGATTGTTAAAGAAGAA+CGG + Chr7:77204669-77204688 None:intergenic 30.0%
TGATTCCAAATTGTGAAAAC+TGG - Chr7:77206232-77206251 MsG0780040414.01.T01:intron 30.0%
TGGTCTAATGTTAAAAAGAC+AGG + Chr7:77205594-77205613 None:intergenic 30.0%
TGGTTAACTATGTTGTATGA+GGG - Chr7:77207168-77207187 MsG0780040414.01.T01:intron 30.0%
TTATCAAACTTTAGTCCTAG+TGG + Chr7:77206509-77206528 None:intergenic 30.0%
TTCATGTTTGTTTAGATGAG+TGG + Chr7:77203526-77203545 None:intergenic 30.0%
TTTCTATAATCAACTCTGTC+TGG - Chr7:77206745-77206764 MsG0780040414.01.T01:intron 30.0%
TTTGTGAAGAAGATGGAATT+GGG + Chr7:77204875-77204894 None:intergenic 30.0%
! AAAAATCTCCTTTTACGAAG+TGG - Chr7:77207723-77207742 MsG0780040414.01.T01:intron 30.0%
! AAGAAGATCATGGGTTAATT+TGG - Chr7:77205029-77205048 MsG0780040414.01.T01:CDS 30.0%
! CACTTTTGCCTCTAATAAAA+GGG + Chr7:77206091-77206110 None:intergenic 30.0%
! CTTACTCTTTTTATACCACA+GGG - Chr7:77205629-77205648 MsG0780040414.01.T01:intron 30.0%
! TAACTCGTCGAAGTATTTAA+GGG + Chr7:77205847-77205866 None:intergenic 30.0%
! TTTCACAATTTGGAATCAGA+AGG + Chr7:77206230-77206249 None:intergenic 30.0%
!! ACGGTGAAAGATTTGTTAAA+TGG + Chr7:77204650-77204669 None:intergenic 30.0%
!! ATAAAAGGGTGCTTAGATAT+AGG + Chr7:77206077-77206096 None:intergenic 30.0%
!! GAAGTAAAGGTCTTATTAAG+TGG - Chr7:77207500-77207519 MsG0780040414.01.T01:intron 30.0%
!! GTTTTTGATAGTAATGGTGA+TGG - Chr7:77203712-77203731 MsG0780040414.01.T01:CDS 30.0%
!! TAAAAGGGTGCTTAGATATA+GGG + Chr7:77206076-77206095 None:intergenic 30.0%
!! TTTGATTTGACTTGAACAAG+TGG + Chr7:77207215-77207234 None:intergenic 30.0%
!! TTTTGAAAAGCTCCAATTTG+TGG - Chr7:77205092-77205111 MsG0780040414.01.T01:CDS 30.0%
!!! CTTCGTAAAAGGAGATTTTT+TGG + Chr7:77207723-77207742 None:intergenic 30.0%
!!! GATTTTGGTTAAAAGTGAGT+TGG - Chr7:77204252-77204271 MsG0780040414.01.T01:intron 30.0%
!!! TATTCATTTTTGGTGATTCC+AGG - Chr7:77203835-77203854 MsG0780040414.01.T01:CDS 30.0%
AAAATGAGAGAGGAAGAATG+AGG + Chr7:77204799-77204818 None:intergenic 35.0%
AAACACACACTAAGATTCTC+TGG + Chr7:77204181-77204200 None:intergenic 35.0%
AAAGATGCTCTTCTATGCTT+AGG + Chr7:77205810-77205829 None:intergenic 35.0%
AAGTCATTGGTGAAGTGAAA+GGG + Chr7:77206635-77206654 None:intergenic 35.0%
AAGTGGTACCACCATTTAAT+TGG - Chr7:77205435-77205454 MsG0780040414.01.T01:intron 35.0%
ACTTGTGTATCCATGATCTA+CGG + Chr7:77205878-77205897 None:intergenic 35.0%
AGAAAATAGCCGTTGTTTAG+TGG + Chr7:77206730-77206749 None:intergenic 35.0%
AGAGAATCTTAGTGTGTGTT+TGG - Chr7:77204180-77204199 MsG0780040414.01.T01:intron 35.0%
AGGATAGTTAAGTACTCGTT+TGG + Chr7:77205252-77205271 None:intergenic 35.0%
ATCCTTACTCAATTGTTGGT+AGG - Chr7:77205391-77205410 MsG0780040414.01.T01:intron 35.0%
ATCTTAGTGTGTGTTTGGTT+TGG - Chr7:77204185-77204204 MsG0780040414.01.T01:intron 35.0%
ATGTTTGTTTAGATGAGTGG+AGG + Chr7:77203523-77203542 None:intergenic 35.0%
ATTGAAGTTCATCAGTGAAG+TGG - Chr7:77207901-77207920 MsG0780040414.01.T01:CDS 35.0%
ATTTGAACATACTTCTCGCT+CGG - Chr7:77203959-77203978 MsG0780040414.01.T01:CDS 35.0%
CAAAGATGGTTCATTTCTTC+TGG - Chr7:77207553-77207572 MsG0780040414.01.T01:intron 35.0%
CAACACCATTGGGAAAAAAA+AGG + Chr7:77207526-77207545 None:intergenic 35.0%
CATTCAAAAGCAATGTGTCA+CGG + Chr7:77204033-77204052 None:intergenic 35.0%
CCTGTGGTATAAAAAGAGTA+AGG + Chr7:77205631-77205650 None:intergenic 35.0%
CTATAAAGCTGAGTGATGAA+GGG - Chr7:77207840-77207859 MsG0780040414.01.T01:CDS 35.0%
CTATCAAAAACAAGACTCTC+CGG + Chr7:77203703-77203722 None:intergenic 35.0%
CTCTAACTCATAGCTACATT+AGG - Chr7:77206388-77206407 MsG0780040414.01.T01:intron 35.0%
GAAAGATGGAAAACTTTGGA+TGG - Chr7:77207928-77207947 MsG0780040414.01.T01:CDS 35.0%
GAGCTCCATTAATACTTTGT+AGG + Chr7:77205539-77205558 None:intergenic 35.0%
GTAACTTCACCACTAAACAA+CGG - Chr7:77206718-77206737 MsG0780040414.01.T01:intron 35.0%
GTGTAAAACGAAAATGAGAG+AGG + Chr7:77204809-77204828 None:intergenic 35.0%
GTGTTCAAACTAGTTGGAAA+AGG + Chr7:77206146-77206165 None:intergenic 35.0%
GTTATTGCTTTCAATGCAAG+TGG - Chr7:77205418-77205437 MsG0780040414.01.T01:intron 35.0%
GTTTACCAAAAGCCACAAAT+TGG + Chr7:77205107-77205126 None:intergenic 35.0%
GTTTGTGAAGAAGATGGAAT+TGG + Chr7:77204876-77204895 None:intergenic 35.0%
TAAAACTCAAGAAATCCCTG+TGG + Chr7:77205647-77205666 None:intergenic 35.0%
TATAAAGCTGAGTGATGAAG+GGG - Chr7:77207841-77207860 MsG0780040414.01.T01:CDS 35.0%
TATTGAGAGATGAGAGAATG+AGG + Chr7:77204687-77204706 None:intergenic 35.0%
TCAGTGTTAATGCCTTACAT+TGG - Chr7:77207953-77207972 MsG0780040414.01.T01:CDS 35.0%
TCCTTACTCAATTGTTGGTA+GGG - Chr7:77205392-77205411 MsG0780040414.01.T01:intron 35.0%
TTATCTCCACATAGACGAAA+TGG - Chr7:77205327-77205346 MsG0780040414.01.T01:intron 35.0%
TTGCTTAAAGCAACACCATT+GGG + Chr7:77207536-77207555 None:intergenic 35.0%
TTTGCTTAAAGCAACACCAT+TGG + Chr7:77207537-77207556 None:intergenic 35.0%
! AAATTCAGAAGGGCAGTTTT+GGG - Chr7:77207685-77207704 MsG0780040414.01.T01:intron 35.0%
! AACTCGTCGAAGTATTTAAG+GGG + Chr7:77205846-77205865 None:intergenic 35.0%
! AATTGCTTCTGCAACTTTTC+TGG - Chr7:77203555-77203574 MsG0780040414.01.T01:three_prime_UTR 35.0%
! ACCGGTGAAAAGAAATTTTG+CGG + Chr7:77203613-77203632 None:intergenic 35.0%
! AGTCTCCAGTTTTCACAATT+TGG + Chr7:77206240-77206259 None:intergenic 35.0%
! AGTGCAATTTTCTCTATACG+TGG + Chr7:77207029-77207048 None:intergenic 35.0%
! ATTCCGTTGTATGATTTGCA+AGG - Chr7:77206432-77206451 MsG0780040414.01.T01:intron 35.0%
! CAAAAGTGCGCTTACATATA+GGG - Chr7:77206103-77206122 MsG0780040414.01.T01:intron 35.0%
! CCTTACTCTTTTTATACCAC+AGG - Chr7:77205628-77205647 MsG0780040414.01.T01:intron 35.0%
! CTAACTCGTCGAAGTATTTA+AGG + Chr7:77205848-77205867 None:intergenic 35.0%
! CTTTTGGTAAACGTGAGTTT+GGG - Chr7:77205115-77205134 MsG0780040414.01.T01:intron 35.0%
! GCACTTTTGCCTCTAATAAA+AGG + Chr7:77206092-77206111 None:intergenic 35.0%
! TATATTTCTGATGCCTACCT+TGG - Chr7:77206545-77206564 MsG0780040414.01.T01:intron 35.0%
! TCCGCAAAATTTCTTTTCAC+CGG - Chr7:77203609-77203628 MsG0780040414.01.T01:CDS 35.0%
! TCTAAGCACCCTTTTATTAG+AGG - Chr7:77206080-77206099 MsG0780040414.01.T01:intron 35.0%
! TTATCCTGATTTAGCCGTTT+TGG - Chr7:77207143-77207162 MsG0780040414.01.T01:intron 35.0%
!! GAAATTTTAGGGAAGAGATG+AGG + Chr7:77204724-77204743 None:intergenic 35.0%
!! GAAATTTTGCGGATTGAATG+AGG + Chr7:77203602-77203621 None:intergenic 35.0%
!!! AAGCATAGAAGAGCATCTTT+TGG - Chr7:77205810-77205829 MsG0780040414.01.T01:intron 35.0%
!!! AATGCTGTTTTACTCGAAAG+TGG - Chr7:77206909-77206928 MsG0780040414.01.T01:intron 35.0%
!!! AGCATAGAAGAGCATCTTTT+GGG - Chr7:77205811-77205830 MsG0780040414.01.T01:intron 35.0%
!!! TTGCTTTTTTCCTGGTGTTT+GGG + Chr7:77205179-77205198 None:intergenic 35.0%
!!! TTTGCTTTTTTCCTGGTGTT+TGG + Chr7:77205180-77205199 None:intergenic 35.0%
!!! TTTTTAGTTACCCAAACACC+AGG - Chr7:77205166-77205185 MsG0780040414.01.T01:intron 35.0%
AAAGCCTGGAAGATTGTGAA+GGG - Chr7:77207873-77207892 MsG0780040414.01.T01:CDS 40.0%
AATCCTGCAAATCGAGGTTT+CGG + Chr7:77207582-77207601 None:intergenic 40.0%
ACCCTACCAACAATTGAGTA+AGG + Chr7:77205396-77205415 None:intergenic 40.0%
AGGGGAAATATTAGAAAGCC+TGG - Chr7:77207859-77207878 MsG0780040414.01.T01:CDS 40.0%
AGTGAAGTGGAAGAGAAAGA+TGG - Chr7:77207914-77207933 MsG0780040414.01.T01:CDS 40.0%
AGTGGATGTCTTCTAATCTC+TGG - Chr7:77207741-77207760 MsG0780040414.01.T01:intron 40.0%
AGTTGGAGTATATTTGTGGG+AGG - Chr7:77206483-77206502 MsG0780040414.01.T01:intron 40.0%
ATTGAGTAAGCATGTGGCAA+GGG - Chr7:77205778-77205797 MsG0780040414.01.T01:intron 40.0%
CAAGTCATTGGTGAAGTGAA+AGG + Chr7:77206636-77206655 None:intergenic 40.0%
CAAGTTCAGTTTACCAGAGA+AGG - Chr7:77206696-77206715 MsG0780040414.01.T01:intron 40.0%
CATTCCAAAACGGCTAAATC+AGG + Chr7:77207150-77207169 None:intergenic 40.0%
CCACAAATATACTCCAACTC+CGG + Chr7:77206482-77206501 None:intergenic 40.0%
CGACCTTGCAAATCATACAA+CGG + Chr7:77206438-77206457 None:intergenic 40.0%
CGGAGTTGGAGTATATTTGT+GGG - Chr7:77206480-77206499 MsG0780040414.01.T01:intron 40.0%
CGTTTAGTAACTTAGCAGCA+TGG + Chr7:77203663-77203682 None:intergenic 40.0%
CTTATATTGTCGGGAAAACC+TGG + Chr7:77207662-77207681 None:intergenic 40.0%
CTTTCACTTCACCAATGACT+TGG - Chr7:77206634-77206653 MsG0780040414.01.T01:intron 40.0%
GAAGACATCCACTTCGTAAA+AGG + Chr7:77207734-77207753 None:intergenic 40.0%
GAGGATCCTTACTCAATTGT+TGG - Chr7:77205387-77205406 MsG0780040414.01.T01:intron 40.0%
GATACGATTGAGTAAGCATG+TGG - Chr7:77205772-77205791 MsG0780040414.01.T01:intron 40.0%
GCTAAGTTACTAAACGTCAC+CGG - Chr7:77203667-77203686 MsG0780040414.01.T01:CDS 40.0%
GCTATAAAGCTGAGTGATGA+AGG - Chr7:77207839-77207858 MsG0780040414.01.T01:CDS 40.0%
GTATCTCCATTTCGTCTATG+TGG + Chr7:77205336-77205355 None:intergenic 40.0%
GTGGATGTCTTCTAATCTCT+GGG - Chr7:77207742-77207761 MsG0780040414.01.T01:intron 40.0%
GTTATTCTTCGATCCAGGAA+TGG + Chr7:77203638-77203657 None:intergenic 40.0%
TAGACTCTAACCGTAGATCA+TGG - Chr7:77205865-77205884 MsG0780040414.01.T01:intron 40.0%
TTAGATGAGTGGAGGAAAAG+TGG + Chr7:77203515-77203534 None:intergenic 40.0%
TTAGTAACTTAGCAGCATGG+AGG + Chr7:77203660-77203679 None:intergenic 40.0%
TTCACTGATGTCCAAGTCAT+TGG + Chr7:77206648-77206667 None:intergenic 40.0%
TTGCTGTCACAAGTTCCAAT+AGG - Chr7:77203803-77203822 MsG0780040414.01.T01:CDS 40.0%
TTTGAACATACTTCTCGCTC+GGG - Chr7:77203960-77203979 MsG0780040414.01.T01:CDS 40.0%
! AAGATGGAATTGGGCTCTAA+GGG + Chr7:77204866-77204885 None:intergenic 40.0%
! AAGCTCCAATTTGTGGCTTT+TGG - Chr7:77205099-77205118 MsG0780040414.01.T01:CDS 40.0%
! CAGGTTTTCCCGACAATATA+AGG - Chr7:77207660-77207679 MsG0780040414.01.T01:intron 40.0%
! CGTTGTATGATTTGCAAGGT+CGG - Chr7:77206436-77206455 MsG0780040414.01.T01:intron 40.0%
! GAAATTCAGAAGGGCAGTTT+TGG - Chr7:77207684-77207703 MsG0780040414.01.T01:intron 40.0%
! GAGTTTGGAACATTCAAACG+CGG + Chr7:77205204-77205223 None:intergenic 40.0%
! GCAAAAGTGCGCTTACATAT+AGG - Chr7:77206102-77206121 MsG0780040414.01.T01:intron 40.0%
! GCTTTTGGTAAACGTGAGTT+TGG - Chr7:77205114-77205133 MsG0780040414.01.T01:intron 40.0%
! TACTCAATTGTTGGTAGGGT+AGG - Chr7:77205396-77205415 MsG0780040414.01.T01:intron 40.0%
! TCCAACTAGTTTGAACACGA+GGG - Chr7:77206148-77206167 MsG0780040414.01.T01:intron 40.0%
! TTCCAACTAGTTTGAACACG+AGG - Chr7:77206147-77206166 MsG0780040414.01.T01:intron 40.0%
!! GAACAGCAAAAGTATCGACT+TGG + Chr7:77207637-77207656 None:intergenic 40.0%
!! GGTGTTGCTTTAAGCAAAGA+TGG - Chr7:77207539-77207558 MsG0780040414.01.T01:intron 40.0%
!! TGGAGAGTGTAGTTTGTTTG+CGG + Chr7:77203473-77203492 None:intergenic 40.0%
!! TGTGTTGGTTGAAGCTTTGA+TGG - Chr7:77204759-77204778 MsG0780040414.01.T01:intron 40.0%
!! TTAGTGTGTGTTTGGTTTGG+CGG - Chr7:77204188-77204207 MsG0780040414.01.T01:intron 40.0%
!!! AGTGGCCTTTTTTTTCCCAA+TGG - Chr7:77207518-77207537 MsG0780040414.01.T01:intron 40.0%
!!! CTGATTTAGCCGTTTTGGAA+TGG - Chr7:77207148-77207167 MsG0780040414.01.T01:intron 40.0%
!!! GATACTTTTGCTGTTCTTCC+AGG - Chr7:77207641-77207660 MsG0780040414.01.T01:intron 40.0%
!!! GATTTTGAAATGGGAAGGAG+AGG - Chr7:77203762-77203781 MsG0780040414.01.T01:CDS 40.0%
!!! GGATGGTCGGATTTTGAAAT+GGG - Chr7:77203753-77203772 MsG0780040414.01.T01:CDS 40.0%
ACTCTTAGTGGAGACAAGAC+TGG - Chr7:77207446-77207465 MsG0780040414.01.T01:intron 45.0%
AGTGCGCTTACATATAGGGA+CGG - Chr7:77206107-77206126 MsG0780040414.01.T01:intron 45.0%
AGTGGTGAAGTTACCTTCTC+TGG + Chr7:77206712-77206731 None:intergenic 45.0%
CCCAGTCAACAAATGTTCGT+CGG + Chr7:77206946-77206965 None:intergenic 45.0%
CCGGAGTTGGAGTATATTTG+TGG - Chr7:77206479-77206498 MsG0780040414.01.T01:intron 45.0%
CTCTGGGTTTGTGAAGAAGA+TGG + Chr7:77204882-77204901 None:intergenic 45.0%
GAAAGCCTGGAAGATTGTGA+AGG - Chr7:77207872-77207891 MsG0780040414.01.T01:CDS 45.0%
GAAGATGGAATTGGGCTCTA+AGG + Chr7:77204867-77204886 None:intergenic 45.0%
GAAGTGGTGAAGTCAGCAAA+TGG + Chr7:77203493-77203512 None:intergenic 45.0%
GATTGAGTAAGCATGTGGCA+AGG - Chr7:77205777-77205796 MsG0780040414.01.T01:intron 45.0%
GCTTTGACTGAAATTCTGCC+TGG - Chr7:77206296-77206315 MsG0780040414.01.T01:intron 45.0%
TATATTTGTGGGAGGCCACT+AGG - Chr7:77206491-77206510 MsG0780040414.01.T01:intron 45.0%
TCATGCAAGCAAAACCTACC+AGG + Chr7:77206317-77206336 None:intergenic 45.0%
TCCCGTTTGAGCCTAGAAAA+CGG - Chr7:77205222-77205241 MsG0780040414.01.T01:intron 45.0%
TCTTCCCTTCACAATCTTCC+AGG + Chr7:77207880-77207899 None:intergenic 45.0%
TGACTGAAATTCTGCCTGGT+AGG - Chr7:77206300-77206319 MsG0780040414.01.T01:intron 45.0%
TGCTTAGATATAGGGACGGA+GGG + Chr7:77206068-77206087 None:intergenic 45.0%
TGCTTGCATGATGTGCAGAA+AGG - Chr7:77206326-77206345 MsG0780040414.01.T01:intron 45.0%
TGGAGGTTATTCTTCGATCC+AGG + Chr7:77203643-77203662 None:intergenic 45.0%
TGGCTTCATGGACCTAATGT+TGG - Chr7:77207611-77207630 MsG0780040414.01.T01:intron 45.0%
TTAGGGAAGAGATGAGGAAG+TGG + Chr7:77204718-77204737 None:intergenic 45.0%
TTAGTGGAGACAAGACTGGA+CGG - Chr7:77207450-77207469 MsG0780040414.01.T01:intron 45.0%
TTCGATCCAGGAATGGAAAC+CGG + Chr7:77203631-77203650 None:intergenic 45.0%
TTGAACATACTTCTCGCTCG+GGG - Chr7:77203961-77203980 MsG0780040414.01.T01:CDS 45.0%
TTGAGTAAGCATGTGGCAAG+GGG - Chr7:77205779-77205798 MsG0780040414.01.T01:intron 45.0%
! ACCCGTTTTCTAGGCTCAAA+CGG + Chr7:77205227-77205246 None:intergenic 45.0%
! ACCGACGAACATTTGTTGAC+TGG - Chr7:77206942-77206961 MsG0780040414.01.T01:intron 45.0%
! AGCTTTATAGCTGCAGCATG+AGG + Chr7:77207830-77207849 None:intergenic 45.0%
! AGGGTGCTTAGATATAGGGA+CGG + Chr7:77206072-77206091 None:intergenic 45.0%
! ATTTGAAACATGCGTGCACG+AGG + Chr7:77203446-77203465 None:intergenic 45.0%
! CCAACTAGTTTGAACACGAG+GGG - Chr7:77206149-77206168 MsG0780040414.01.T01:intron 45.0%
! CCGACGAACATTTGTTGACT+GGG - Chr7:77206943-77206962 MsG0780040414.01.T01:intron 45.0%
! CGGGGTATCAAATGTCTCTA+TGG - Chr7:77203979-77203998 MsG0780040414.01.T01:CDS 45.0%
! CGTTTGGTTACCCGTTTTCT+AGG + Chr7:77205236-77205255 None:intergenic 45.0%
! TTTGAAACATGCGTGCACGA+GGG + Chr7:77203445-77203464 None:intergenic 45.0%
!! ATTCTGAGGCTTTGGCTTCA+TGG - Chr7:77207599-77207618 MsG0780040414.01.T01:intron 45.0%
!! CGGATGGTCGGATTTTGAAA+TGG - Chr7:77203752-77203771 MsG0780040414.01.T01:CDS 45.0%
!! GTATCGACTTGGCCAACATT+AGG + Chr7:77207626-77207645 None:intergenic 45.0%
!! TTTGCAGGATTCTGAGGCTT+TGG - Chr7:77207591-77207610 MsG0780040414.01.T01:intron 45.0%
!!! ACGCGGTTTTGCTTTTTTCC+TGG + Chr7:77205187-77205206 None:intergenic 45.0%
!!! GGTCGGATTTTGAAATGGGA+AGG - Chr7:77203757-77203776 MsG0780040414.01.T01:CDS 45.0%
!!! TGTTGGTCACTTTTGTCTGC+AGG - Chr7:77207408-77207427 MsG0780040414.01.T01:intron 45.0%
!!! TTTTCACCGGTTTCCATTCC+TGG - Chr7:77203622-77203641 MsG0780040414.01.T01:CDS 45.0%
!! ATATAAAAAATAATTAATAG+TGG + Chr7:77205287-77205306 None:intergenic 5.0%
!!! AATAATTTTTTTTATCAATT+GGG - Chr7:77204513-77204532 MsG0780040414.01.T01:intron 5.0%
!!! TAATAATTTTTTTTATCAAT+TGG - Chr7:77204512-77204531 MsG0780040414.01.T01:intron 5.0%
AAATGGGAAGGAGAGGAACG+TGG - Chr7:77203769-77203788 MsG0780040414.01.T01:CDS 50.0%
AGCTTCAGTTGCTACCTGAG+TGG + Chr7:77206603-77206622 None:intergenic 50.0%
CAGGTAGCAACTGAAGCTGA+GGG - Chr7:77206605-77206624 MsG0780040414.01.T01:intron 50.0%
CATTGGTGAAGTGAAAGGGC+TGG + Chr7:77206631-77206650 None:intergenic 50.0%
CCCCTCGTGTTCAAACTAGT+TGG + Chr7:77206152-77206171 None:intergenic 50.0%
CCCGTTTGAGCCTAGAAAAC+GGG - Chr7:77205223-77205242 MsG0780040414.01.T01:intron 50.0%
CCTCAGAATCCTGCAAATCG+AGG + Chr7:77207588-77207607 None:intergenic 50.0%
CGCTTACATATAGGGACGGA+GGG - Chr7:77206111-77206130 MsG0780040414.01.T01:intron 50.0%
GAGTGGAGGAAAAGTGGAAG+TGG + Chr7:77203509-77203528 None:intergenic 50.0%
GCTTCGGCATTCATGTTGCA+TGG + Chr7:77204923-77204942 None:intergenic 50.0%
GTGCTTAGATATAGGGACGG+AGG + Chr7:77206069-77206088 None:intergenic 50.0%
TCAGGTAGCAACTGAAGCTG+AGG - Chr7:77206604-77206623 MsG0780040414.01.T01:intron 50.0%
TCTAGGCTCAAACGGGAGTT+TGG + Chr7:77205219-77205238 None:intergenic 50.0%
TCTCGACCATGTTCCTGCTT+CGG + Chr7:77204939-77204958 None:intergenic 50.0%
TGAATGCCGAAGCAGGAACA+TGG - Chr7:77204930-77204949 MsG0780040414.01.T01:CDS 50.0%
TGAGTAAGCATGTGGCAAGG+GGG - Chr7:77205780-77205799 MsG0780040414.01.T01:intron 50.0%
TGCAACATGAATGCCGAAGC+AGG - Chr7:77204923-77204942 MsG0780040414.01.T01:CDS 50.0%
TGGGAGATTGAAGCACGTTC+AGG - Chr7:77205134-77205153 MsG0780040414.01.T01:intron 50.0%
! AATAGTGGTGGAGCTCACTC+AGG + Chr7:77205272-77205291 None:intergenic 50.0%
! CCCGTTTTCTAGGCTCAAAC+GGG + Chr7:77205226-77205245 None:intergenic 50.0%
! CCTCGATTTGCAGGATTCTG+AGG - Chr7:77207585-77207604 MsG0780040414.01.T01:intron 50.0%
! TAGCCGAAACCTCGATTTGC+AGG - Chr7:77207576-77207595 MsG0780040414.01.T01:intron 50.0%
AACAAGACTCTCCGGCCCAA+CGG + Chr7:77203695-77203714 None:intergenic 55.0%
GCGCTTACATATAGGGACGG+AGG - Chr7:77206110-77206129 MsG0780040414.01.T01:intron 55.0%
GTCGCCAACAACGCTTGCAA+CGG + Chr7:77207803-77207822 None:intergenic 55.0%
TAAACGTCACCGGAGCCGTT+GGG - Chr7:77203677-77203696 MsG0780040414.01.T01:CDS 55.0%
TACCTTGGCCTCAACGTCGT+AGG - Chr7:77206560-77206579 MsG0780040414.01.T01:intron 55.0%
TACGACGTTGAGGCCAAGGT+AGG + Chr7:77206561-77206580 None:intergenic 55.0%
TACTCCAACTCCGGTGCGAA+TGG + Chr7:77206473-77206492 None:intergenic 55.0%
TCAACGTCGTAGGACCTGCA+GGG - Chr7:77206570-77206589 MsG0780040414.01.T01:intron 55.0%
! GAAGCCGTTGCAAGCGTTGT+TGG - Chr7:77207796-77207815 MsG0780040414.01.T01:CDS 55.0%
!! AATGGTGATGGGCCGTACAC+TGG - Chr7:77203724-77203743 MsG0780040414.01.T01:CDS 55.0%
!! GAACACGAGGGGCATTGAGA+TGG - Chr7:77206160-77206179 MsG0780040414.01.T01:intron 55.0%
!! GTGTGTGTTTGGTTTGGCGG+TGG - Chr7:77204191-77204210 MsG0780040414.01.T01:intron 55.0%
AACGTCGTAGGACCTGCAGG+GGG - Chr7:77206572-77206591 MsG0780040414.01.T01:intron 60.0%
CAACGTCGTAGGACCTGCAG+GGG - Chr7:77206571-77206590 MsG0780040414.01.T01:intron 60.0%
CTAAACGTCACCGGAGCCGT+TGG - Chr7:77203676-77203695 MsG0780040414.01.T01:CDS 60.0%
CTCAACGTCGTAGGACCTGC+AGG - Chr7:77206569-77206588 MsG0780040414.01.T01:intron 60.0%
CTGCAGGTCCTACGACGTTG+AGG + Chr7:77206571-77206590 None:intergenic 60.0%
CTGTGTGCGTCCATTCGCAC+CGG - Chr7:77206460-77206479 MsG0780040414.01.T01:intron 60.0%
GGGAAGGAGAGGAACGTGGT+TGG - Chr7:77203773-77203792 MsG0780040414.01.T01:CDS 60.0%
GTCCTACGACGTTGAGGCCA+AGG + Chr7:77206565-77206584 None:intergenic 60.0%
!! CACGAGGGGCATTGAGATGG+AGG - Chr7:77206163-77206182 MsG0780040414.01.T01:intron 60.0%
CCATCCGCCACGCCAGTGTA+CGG + Chr7:77203739-77203758 None:intergenic 65.0%
CGTAGGACCTGCAGGGGGTT+TGG - Chr7:77206577-77206596 MsG0780040414.01.T01:intron 65.0%
GCGTCCATTCGCACCGGAGT+TGG - Chr7:77206466-77206485 MsG0780040414.01.T01:intron 65.0%
TGAGTGGCCAAACCCCCTGC+AGG + Chr7:77206587-77206606 None:intergenic 65.0%
TGCAGGGGGTTTGGCCACTC+AGG - Chr7:77206586-77206605 MsG0780040414.01.T01:intron 65.0%
! TGATGGGCCGTACACTGGCG+TGG - Chr7:77203729-77203748 MsG0780040414.01.T01:CDS 65.0%
!! ACACTGGCGTGGCGGATGGT+CGG - Chr7:77203740-77203759 MsG0780040414.01.T01:CDS 65.0%
ACTCTCCGGCCCAACGGCTC+CGG + Chr7:77203689-77203708 None:intergenic 70.0%
TGGGCCGTACACTGGCGTGG+CGG - Chr7:77203732-77203751 MsG0780040414.01.T01:CDS 70.0%
! CCGTACACTGGCGTGGCGGA+TGG - Chr7:77203736-77203755 MsG0780040414.01.T01:CDS 70.0%
CGTCACCGGAGCCGTTGGGC+CGG - Chr7:77203681-77203700 MsG0780040414.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr7 gene 77203436 77208150 77203436 ID=MsG0780040414.01;Name=MsG0780040414.01
Chr7 mRNA 77203436 77208150 77203436 ID=MsG0780040414.01.T01;Parent=MsG0780040414.01;Name=MsG0780040414.01.T01;_AED=0.45;_eAED=0.45;_QI=105|1|1|1|0.5|1|3|159|369
Chr7 exon 77203436 77204156 77203436 ID=MsG0780040414.01.T01:exon:14845;Parent=MsG0780040414.01.T01
Chr7 exon 77204869 77205132 77204869 ID=MsG0780040414.01.T01:exon:14844;Parent=MsG0780040414.01.T01
Chr7 exon 77207762 77208150 77207762 ID=MsG0780040414.01.T01:exon:14843;Parent=MsG0780040414.01.T01
Chr7 five_prime_UTR 77208046 77208150 77208046 ID=MsG0780040414.01.T01:five_prime_utr;Parent=MsG0780040414.01.T01
Chr7 CDS 77207762 77208045 77207762 ID=MsG0780040414.01.T01:cds;Parent=MsG0780040414.01.T01
Chr7 CDS 77204869 77205132 77204869 ID=MsG0780040414.01.T01:cds;Parent=MsG0780040414.01.T01
Chr7 CDS 77203595 77204156 77203595 ID=MsG0780040414.01.T01:cds;Parent=MsG0780040414.01.T01
Chr7 three_prime_UTR 77203436 77203594 77203436 ID=MsG0780040414.01.T01:three_prime_utr;Parent=MsG0780040414.01.T01
Gene Sequence

>MsG0780040414.01.T01

ATGAATTCTAATATAATTGCTTCTGCAACTTTTCTGGCACTCTTCGCCATTATTTTCACCTCATTCAATCCGCAAAATTTCTTTTCACCGGTTTCCATTCCTGGATCGAAGAATAACCTCCATGCTGCTAAGTTACTAAACGTCACCGGAGCCGTTGGGCCGGAGAGTCTTGTTTTTGATAGTAATGGTGATGGGCCGTACACTGGCGTGGCGGATGGTCGGATTTTGAAATGGGAAGGAGAGGAACGTGGTTGGACTCAATTTGCTGTCACAAGTTCCAATAGGTCGGACTGTGTGCGTCCATTCGCACCGGAGTTGGAGTATATTTGTGGGAGGCCACTAGGACTAAAGTTTGATAAGAAAAATGGAGATTTGTATATTTCTGATGCCTACCTTGGCCTCAACGTCGTAGGACCTGCAGGGGGTTTGGCCACTCAGGTAGCAACTGAAGCTGAGGGCCAGCCCTTTCACTTCACCAATGACTTGGACATCAGTGAAGATGAAGATGTGATTTACTTCACTGATTCAAGTTCAGTTTACCAGAGAAGGCAACATATGCTTGTAACTCTTAGTGGAGACAAGACTGGACGGTTAATGAAATATGATAAGTCGACTAAAGAAGTAAAGGTCTTATTAAGTGGCCTTTTTTTTCCCAATGGTGTTGCTTTAAGCAAAGATGGTTCATTTCTTCTGGTAGCCGAAACCTCGATTTGCAGGATTCTGAGGCTTTGGCTTCATGGACCTAATGTTGGCCAAGTCGATACTTTTGCTGTTCTTCCAGGTTTTCCCGACAATATAAGGAGAAATTCAGAAGGGCAGTTTTGGGTTGCTTTGCATTCCAAAAAATCTCCTTTTACGAAGTGGATGTCTTCTAATCTCTGGGCTCGTAAAGCATTGTTAAAGCTTAGAAACTTGAAGCCGTTGCAAGCGTTGTTGGCGACGAAGCCTCATGCTGCAGCTATAAAGCTGAGTGATGAAGGGGAAATATTAGAAAGCCTGGAAGATTGTGAAGGGAAGACATTGAAGTTCATCAGTGAAGTGGAAGAGAAAGATGGAAAACTTTGGATGGCATCAGTGTTAATGCCTTACATTGGTGTTTATAGTTTATGA
Protein sequence

>MsG0780040414.01.T01

MNSNIIASATFLALFAIIFTSFNPQNFFSPVSIPGSKNNLHAAKLLNVTGAVGPESLVFDSNGDGPYTGVADGRILKWEGEERGWTQFAVTSSNRSDCVRPFAPELEYICGRPLGLKFDKKNGDLYISDAYLGLNVVGPAGGLATQVATEAEGQPFHFTNDLDISEDEDVIYFTDSSSVYQRRQHMLVTLSGDKTGRLMKYDKSTKEVKVLLSGLFFPNGVALSKDGSFLLVAETSICRILRLWLHGPNVGQVDTFAVLPGFPDNIRRNSEGQFWVALHSKKSPFTKWMSSNLWARKALLKLRNLKPLQALLATKPHAAAIKLSDEGEILESLEDCEGKTLKFISEVEEKDGKLWMASVLMPYIGVYSL*