AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041135.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041135.01.T01 MTR_7g104800 97.275 477 5 2 1 469 1 477 0.0 943
MsG0780041135.01.T01 MTR_4g052940 69.492 354 104 2 80 430 92 444 0.0 530
MsG0780041135.01.T01 MTR_7g010360 62.912 364 129 3 76 436 330 690 8.31e-163 478
MsG0780041135.01.T01 MTR_7g118120 52.696 408 177 7 43 436 44 449 1.94e-140 412
MsG0780041135.01.T01 MTR_4g052940 68.582 261 79 1 80 337 92 352 4.81e-133 388
MsG0780041135.01.T01 MTR_8g076100 32.806 253 163 4 99 344 419 671 1.65e-36 144
MsG0780041135.01.T01 MTR_8g076100 33.077 260 163 6 99 347 419 678 2.34e-36 143
MsG0780041135.01.T01 MTR_8g076100 33.077 260 163 6 99 347 419 678 2.47e-36 143
MsG0780041135.01.T01 MTR_8g007390 30.333 300 177 9 59 347 195 473 5.96e-32 130
MsG0780041135.01.T01 MTR_8g007390 30.333 300 177 9 59 347 196 474 6.19e-32 130
MsG0780041135.01.T01 MTR_7g081210 29.496 278 174 8 62 326 162 430 1.07e-23 105
MsG0780041135.01.T01 MTR_4g131970 22.881 354 214 11 92 407 63 395 3.53e-19 89.7
MsG0780041135.01.T01 MTR_3g102040 24.786 234 155 8 98 317 24 250 2.82e-15 78.6
MsG0780041135.01.T01 MTR_1g019150 25.296 253 168 8 98 336 32 277 6.98e-15 77.4
MsG0780041135.01.T01 MTR_2g022950 21.404 285 186 8 100 353 62 339 1.07e-14 76.3
MsG0780041135.01.T01 MTR_4g085540 24.860 358 219 10 100 413 124 475 1.61e-14 76.3
MsG0780041135.01.T01 MTR_6g040190 25.461 271 176 8 98 353 25 284 1.04e-13 73.9
MsG0780041135.01.T01 MTR_1g020080 23.301 309 191 9 100 375 99 394 1.38e-13 72.8
MsG0780041135.01.T01 MTR_7g102730 22.772 404 238 14 100 464 100 468 2.33e-13 72.8
MsG0780041135.01.T01 MTR_3g101370 21.831 284 182 6 100 352 95 369 2.88e-12 68.6
MsG0780041135.01.T01 MTR_3g082650 23.288 219 159 5 176 393 19 229 1.64e-11 65.9
MsG0780041135.01.T01 MTR_6g004810 23.121 173 127 3 176 348 46 212 8.10e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041135.01.T01 AT3G52660 56.034 464 188 6 21 469 9 471 1.55e-159 460
MsG0780041135.01.T01 AT3G52660 56.034 464 188 6 21 469 9 471 1.55e-159 460
MsG0780041135.01.T01 AT3G52660 56.034 464 188 6 21 469 9 471 1.55e-159 460
MsG0780041135.01.T01 AT4G00830 51.981 429 190 8 55 469 69 495 9.25e-157 454
MsG0780041135.01.T01 AT4G00830 51.981 429 190 8 55 469 69 495 9.25e-157 454
MsG0780041135.01.T01 AT4G00830 51.981 429 190 8 55 469 69 495 9.25e-157 454
MsG0780041135.01.T01 AT4G00830 51.049 429 186 9 55 469 69 487 1.81e-150 437
MsG0780041135.01.T01 AT4G00830 51.049 429 186 9 55 469 69 487 1.81e-150 437
MsG0780041135.01.T01 AT4G00830 50.583 429 196 8 55 469 69 495 3.69e-150 437
MsG0780041135.01.T01 AT5G28390 44.017 234 75 3 238 469 1 180 2.08e-52 175
MsG0780041135.01.T01 AT2G44710 28.339 307 190 8 52 347 101 388 5.44e-28 118
MsG0780041135.01.T01 AT2G44710 28.339 307 190 8 52 347 186 473 7.91e-28 117
MsG0780041135.01.T01 AT2G44710 28.339 307 190 8 52 347 186 473 7.91e-28 117
MsG0780041135.01.T01 AT4G34110 26.459 257 160 9 98 336 36 281 1.77e-17 85.9
MsG0780041135.01.T01 AT4G34110 24.033 362 219 12 100 414 126 478 1.32e-13 73.6
MsG0780041135.01.T01 AT1G71770 25.651 269 178 7 98 351 59 320 1.14e-16 83.2
MsG0780041135.01.T01 AT1G71770 22.678 366 228 13 100 415 148 508 2.55e-12 69.7
MsG0780041135.01.T01 AT1G71770 25.651 269 178 7 98 351 59 320 1.14e-16 83.2
MsG0780041135.01.T01 AT1G71770 22.678 366 228 13 100 415 148 508 2.55e-12 69.7
MsG0780041135.01.T01 AT2G23350 24.346 382 233 15 100 445 136 497 1.67e-16 82.8
MsG0780041135.01.T01 AT2G23350 25.794 252 162 9 100 334 48 291 5.46e-15 77.8
MsG0780041135.01.T01 AT1G49760 27.049 244 157 9 98 327 45 281 1.73e-16 82.8
MsG0780041135.01.T01 AT1G49760 23.797 374 207 15 100 434 135 469 1.89e-13 73.2
MsG0780041135.01.T01 AT1G49760 27.049 244 157 9 98 327 45 281 1.73e-16 82.8
MsG0780041135.01.T01 AT1G49760 23.797 374 207 15 100 434 135 469 1.89e-13 73.2
MsG0780041135.01.T01 AT1G22760 25.260 289 170 11 100 353 138 415 7.92e-13 71.2
MsG0780041135.01.T01 AT1G22760 21.933 269 188 7 98 351 49 310 4.83e-12 68.6
MsG0780041135.01.T01 AT2G36660 21.184 321 210 8 100 381 114 430 2.17e-12 69.7
MsG0780041135.01.T01 AT1G49600 21.523 302 188 6 100 361 121 413 1.14e-11 67.0

Find 174 sgRNAs with CRISPR-Local

Find 473 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCTTCTTTGTATGCTTC+TGG 0.169584 7:-87002381 MsG0780041135.01.T01:five_prime_UTR
CCCTGGTGACTCTGAATTTC+GGG 0.172010 7:+87002273 None:intergenic
CCCCTGGTGACTCTGAATTT+CGG 0.182553 7:+87002272 None:intergenic
ATTCTACTTGGTGCCAATTT+TGG 0.211528 7:-86997591 MsG0780041135.01.T01:three_prime_UTR
GACAAAGGAATTAGCATCTA+AGG 0.262798 7:-87001799 MsG0780041135.01.T01:CDS
AGCCTCATCTTCTTCATCTA+AGG 0.282163 7:+87002081 None:intergenic
TGCTAATTCCTTTGTCTTGA+AGG 0.283256 7:+87001806 None:intergenic
AATAAATTGCTTCCCATCAT+AGG 0.285536 7:+86997770 None:intergenic
TCTTCTACAGTCCACTCTTT+AGG 0.290635 7:+87001491 None:intergenic
TGGCGCGTGCTTTGTTCTTA+AGG 0.291925 7:+87003813 None:intergenic
CTCAACTAGTTCAAACAAAT+AGG 0.293611 7:-86997687 MsG0780041135.01.T01:three_prime_UTR
TTAAACTAGCCTGCCAAAAT+TGG 0.297730 7:+86997578 None:intergenic
CGCCAACGATTACGAGTTTA+GGG 0.305185 7:-87003795 MsG0780041135.01.T01:five_prime_UTR
GCGCCAACGATTACGAGTTT+AGG 0.311976 7:-87003796 MsG0780041135.01.T01:five_prime_UTR
GGTATGGTTGGAGGTGGATA+TGG 0.314554 7:-86998892 MsG0780041135.01.T01:CDS
ATCTAGAAAAGCAAGCTTGC+AGG 0.339804 7:+87002334 None:intergenic
CTCCTACCATGCCGGGATAC+TGG 0.355913 7:+86998033 None:intergenic
GGTGCTGTTGGTGCAGGATA+TGG 0.366546 7:-86998871 MsG0780041135.01.T01:CDS
ATCGGCCATGACCACGATTA+CGG 0.369175 7:+86997965 None:intergenic
CACAGAGTTCTAGCCGTAAT+CGG 0.371058 7:-87001225 MsG0780041135.01.T01:CDS
TATGAGAAAATTTGCAGAAC+AGG 0.371907 7:-86997873 MsG0780041135.01.T01:three_prime_UTR
TTCTAGATTCATAGAATGCC+TGG 0.372466 7:-87002319 MsG0780041135.01.T01:exon
CTTCGATTTCACTTCCAATC+AGG 0.389036 7:-87003727 MsG0780041135.01.T01:intron
TCAACTAGTTCAAACAAATA+GGG 0.391746 7:-86997686 MsG0780041135.01.T01:three_prime_UTR
GTTAAGCATCGGTTATTCAT+TGG 0.392291 7:-87001521 MsG0780041135.01.T01:CDS
GGTTGGCCCTGGAGTCATTT+CGG 0.392811 7:-87001447 MsG0780041135.01.T01:CDS
TACGTTGGGCCTTATGGGTC+GGG 0.396545 7:+87003881 None:intergenic
TACATTAGTAAGGATTATAT+CGG 0.403248 7:+86997947 None:intergenic
TATCCACCTCCTCTTGGTTA+TGG 0.404216 7:-86998913 MsG0780041135.01.T01:CDS
CATTTCGGTGGAACTGTTGA+AGG 0.404786 7:-87001432 MsG0780041135.01.T01:intron
CTTCTTGCGCTTCCACCTCA+TGG 0.410083 7:-87002037 MsG0780041135.01.T01:CDS
GGTGGAGGAAGAAGTGGAAG+AGG 0.422190 7:-87002140 MsG0780041135.01.T01:CDS
TAGGAACAATTACATTAGTA+AGG 0.425175 7:+86997937 None:intergenic
TTACGTTGGGCCTTATGGGT+CGG 0.429968 7:+87003880 None:intergenic
GTTGAACAACTCTGAATTCA+AGG 0.433692 7:-87001766 MsG0780041135.01.T01:intron
CTTGGTTATGGTATGGTTGG+AGG 0.434215 7:-86998901 MsG0780041135.01.T01:CDS
GTATGAAGAAGTAGAGGTGG+AGG 0.436885 7:-87002155 MsG0780041135.01.T01:CDS
TGCATAGGTAAGGGTTATGA+AGG 0.438139 7:-87001859 MsG0780041135.01.T01:intron
GGACAAGAAAAGAGCAGATA+TGG 0.438969 7:-86999193 MsG0780041135.01.T01:CDS
TCTTACTCTGCTATTCCATC+TGG 0.438998 7:-87002434 MsG0780041135.01.T01:five_prime_UTR
GGTGAGCAGGTAGATCTTGA+TGG 0.439005 7:-87002217 MsG0780041135.01.T01:CDS
ACAGAGTTCTAGCCGTAATC+GGG 0.441429 7:-87001224 MsG0780041135.01.T01:CDS
CCTGCGTATCCACCTCCTCT+TGG 0.442592 7:-86998919 MsG0780041135.01.T01:CDS
ACCTCCTCTTGGTTATGGTA+TGG 0.445868 7:-86998908 MsG0780041135.01.T01:CDS
TAAAAGCAAATCCCCGATTA+CGG 0.448099 7:+87001212 None:intergenic
CTCGGCGGTGTATGTCCAGA+TGG 0.451609 7:+87003854 None:intergenic
ACTAATGTAATTGTTCCTAC+TGG 0.458808 7:-86997933 MsG0780041135.01.T01:exon
CCTCTTGGTTATGGTATGGT+TGG 0.461631 7:-86998904 MsG0780041135.01.T01:CDS
GTTGTTGCCAAGGTTGGCCC+TGG 0.464947 7:-87001458 MsG0780041135.01.T01:CDS
AAAGAGCTGTTTGAACATCA+TGG 0.465220 7:-86999253 MsG0780041135.01.T01:CDS
GGAGGTGGATATGGTGCTGT+TGG 0.465667 7:-86998883 MsG0780041135.01.T01:CDS
ATGGTTCAGAGGTCTACATT+GGG 0.465780 7:-87002018 MsG0780041135.01.T01:CDS
GGTGCAGGATATGGTGCTGC+TGG 0.466144 7:-86998862 MsG0780041135.01.T01:CDS
AGTAGAGGTGGAGGAAGAAG+TGG 0.470019 7:-87002146 MsG0780041135.01.T01:CDS
AGTGGAAGAGGAAGAAGAAG+AGG 0.471511 7:-87002128 MsG0780041135.01.T01:CDS
CAAGCAGATCAGAAGTCATC+TGG 0.473781 7:-86998973 MsG0780041135.01.T01:CDS
ACGGAGAAGTATGAAATTGA+TGG 0.475658 7:-86999121 MsG0780041135.01.T01:intron
ATGCTTGTGCAGAATATTCA+AGG 0.479524 7:-87001174 MsG0780041135.01.T01:CDS
GGTCACAAAAGCATAACCTT+TGG 0.479540 7:+87001827 None:intergenic
GAATGGACCAGGTCAAACTT+TGG 0.480376 7:-86999016 MsG0780041135.01.T01:intron
TCCCATCATAGGAAAAGATA+AGG 0.481594 7:+86997781 None:intergenic
CATCTGTAGGCTTAGAGCAC+TGG 0.483180 7:-86997725 MsG0780041135.01.T01:three_prime_UTR
TGGACGAATTCACTATTTCT+CGG 0.483888 7:+87003836 None:intergenic
GGCCCAACGTAAAACCCATC+TGG 0.485879 7:-87003869 MsG0780041135.01.T01:five_prime_UTR
GCCTCATCTTCTTCATCTAA+GGG 0.486530 7:+87002082 None:intergenic
TGAATCATCATCATCCTCTC+AGG 0.490075 7:-87001077 MsG0780041135.01.T01:intron
ACCCACAGATTCTGGTGAGC+AGG 0.493614 7:-87002230 MsG0780041135.01.T01:CDS
GGTTATGGTATGGTTGGAGG+TGG 0.495269 7:-86998898 MsG0780041135.01.T01:CDS
AAGAAGGTTGTTGCCAAGGT+TGG 0.496072 7:-87001464 MsG0780041135.01.T01:CDS
AAAGGCCCGCCCGACCCATA+AGG 0.498215 7:-87003890 MsG0780041135.01.T01:five_prime_UTR
GGCATCATTGTCATGCCAGC+AGG 0.499937 7:+86998264 None:intergenic
ACATATGCAATCCTTCCATC+TGG 0.499994 7:+86998231 None:intergenic
AAGAAGAGAGTTTGCAAATG+TGG 0.500154 7:+87002394 None:intergenic
GCTCTCCCTCCTGCTAAAGC+TGG 0.501443 7:-86999214 MsG0780041135.01.T01:CDS
CACCACTACTCCTACCATGC+CGG 0.502610 7:+86998025 None:intergenic
TGAGTATGAAGAAGTAGAGG+TGG 0.503776 7:-87002158 MsG0780041135.01.T01:CDS
GGTCCGGGAGCAACTCCTGC+TGG 0.509565 7:-86998279 MsG0780041135.01.T01:CDS
AGAAGAAGAGGAAGAAGTAG+AGG 0.510075 7:-87002116 MsG0780041135.01.T01:CDS
GAGTTGATGTTGATGTATAA+AGG 0.510191 7:-87003908 MsG0780041135.01.T01:five_prime_UTR
TCGGCGGTGTATGTCCAGAT+GGG 0.512621 7:+87003855 None:intergenic
ACCACTACTCCTACCATGCC+GGG 0.514963 7:+86998026 None:intergenic
TTTAAGTCTAAGATTCTACT+TGG 0.516185 7:-86997603 MsG0780041135.01.T01:three_prime_UTR
CGCGTGCTTTGTTCTTAAGG+TGG 0.517038 7:+87003816 None:intergenic
TTGGGCCTTATGGGTCGGGC+GGG 0.521978 7:+87003885 None:intergenic
GTGAGCAGGTAGATCTTGAT+GGG 0.522099 7:-87002216 MsG0780041135.01.T01:CDS
AGTTCCACCGAAATGACTCC+AGG 0.523128 7:+87001440 None:intergenic
TGATAGGTCAAGTGCAATGA+AGG 0.523880 7:-86999155 MsG0780041135.01.T01:CDS
CCCATCATAGGAAAAGATAA+GGG 0.524572 7:+86997782 None:intergenic
GGATATGGTGCTGTTGGTGC+AGG 0.526774 7:-86998877 MsG0780041135.01.T01:CDS
GGAAAACGGAAGTACCTGAT+TGG 0.528615 7:+87003713 None:intergenic
TGTGACTGTAGGCAACAGCC+AGG 0.530335 7:-86998078 MsG0780041135.01.T01:intron
CTTCCATCTGGTAAAAGCAT+TGG 0.530824 7:+86998243 None:intergenic
AGCTTGCAGGGCAACTATGA+AGG 0.533010 7:+87002347 None:intergenic
GATGATGATTCAGAATTCCT+CGG 0.535591 7:+87001088 None:intergenic
ATAACGATGCAATAGTGAGC+TGG 0.537030 7:-87001117 MsG0780041135.01.T01:CDS
TCTTGTCCAGCTTTAGCAGG+AGG 0.538943 7:+86999208 None:intergenic
AATGACTCCAGGGCCAACCT+TGG 0.541179 7:+87001451 None:intergenic
ATGATGATTCAGAATTCCTC+GGG 0.542091 7:+87001089 None:intergenic
TACCTGCTCACCAGAATCTG+TGG 0.544070 7:+87002228 None:intergenic
ATGCCAGCAGGAGTTGCTCC+CGG 0.544143 7:+86998276 None:intergenic
CATGGTTCAGAGGTCTACAT+TGG 0.544508 7:-87002019 MsG0780041135.01.T01:CDS
TATGAAGAAGGTTGTTGCCA+AGG 0.545814 7:-87001468 MsG0780041135.01.T01:CDS
CTTGTCCAGCTTTAGCAGGA+GGG 0.546775 7:+86999209 None:intergenic
TCTAGATTCATAGAATGCCT+GGG 0.547799 7:-87002318 MsG0780041135.01.T01:exon
GATGACTTCTGATCTGCTTG+TGG 0.549430 7:+86998976 None:intergenic
AGTTGAGTATGAAGAAGTAG+AGG 0.551022 7:-87002161 MsG0780041135.01.T01:CDS
AAAATTTGCAGAACAGGCAT+AGG 0.551199 7:-86997867 MsG0780041135.01.T01:three_prime_UTR
TTGTCAATCTGTGGGAGAAG+TGG 0.551925 7:-87001954 MsG0780041135.01.T01:CDS
ATGCTCCATCACCAGTATCC+CGG 0.551954 7:-86998044 MsG0780041135.01.T01:CDS
GACTGTAGAAGATATGAAGA+AGG 0.552294 7:-87001480 MsG0780041135.01.T01:CDS
AATGTGCAGCCACTGATGTA+TGG 0.552663 7:-86998300 MsG0780041135.01.T01:intron
GCATAGGTAAGGGTTATGAA+GGG 0.554101 7:-87001858 MsG0780041135.01.T01:intron
AATGAAGGCATTGAAGAATA+CGG 0.554131 7:-86999140 MsG0780041135.01.T01:CDS
TTGGTAATGTTCCTAAAGAG+TGG 0.554375 7:-87001502 MsG0780041135.01.T01:CDS
AACCGATGCTTAACTTGAGA+TGG 0.558623 7:+87001530 None:intergenic
CCATGCCGGGATACTGGTGA+TGG 0.560019 7:+86998039 None:intergenic
CAGTGCTCTAAGCCTACAGA+TGG 0.560481 7:+86997726 None:intergenic
AGTAGTGGTGTCAGCTCAAG+TGG 0.560864 7:-86998012 MsG0780041135.01.T01:CDS
AATAACCGTAATCGTGGTCA+TGG 0.562058 7:-86997970 MsG0780041135.01.T01:CDS
TGGTGCTGCTGGCTTTGCAC+CGG 0.565428 7:-86998851 MsG0780041135.01.T01:intron
TCTAGAAAAGCAAGCTTGCA+GGG 0.565994 7:+87002335 None:intergenic
TAACGATGCAATAGTGAGCT+GGG 0.568267 7:-87001116 MsG0780041135.01.T01:CDS
CACCATCTCAAGTTAAGCAT+CGG 0.570455 7:-87001532 MsG0780041135.01.T01:CDS
GCAGCCACTGATGTATGGTC+CGG 0.571930 7:-86998295 MsG0780041135.01.T01:intron
ATGTGGAAAGGTGGAAACAA+TGG 0.573479 7:+87002411 None:intergenic
TCATGGAAAGATCACAAAAG+TGG 0.575285 7:-86999236 MsG0780041135.01.T01:CDS
GCCCGAAATTCAGAGTCACC+AGG 0.578656 7:-87002274 MsG0780041135.01.T01:CDS
CATAGGTAAGGGTTATGAAG+GGG 0.579849 7:-87001857 MsG0780041135.01.T01:intron
AGTTTGCAAATGTGGAAAGG+TGG 0.581122 7:+87002402 None:intergenic
AACCCTAAACTCGTAATCGT+TGG 0.581482 7:+87003793 None:intergenic
ATACCATAACCAAGAGGAGG+TGG 0.583928 7:+86998910 None:intergenic
ATCTGTGGGAGAAGTGGCAG+AGG 0.585652 7:-87001948 MsG0780041135.01.T01:intron
CCAAGAGGAGGTGGATACGC+AGG 0.593051 7:+86998919 None:intergenic
TCCCGGCATGGTAGGAGTAG+TGG 0.593910 7:-86998027 MsG0780041135.01.T01:CDS
CAGCCACTGATGTATGGTCC+GGG 0.596285 7:-86998294 MsG0780041135.01.T01:CDS
GCCCTTAGATGAAGAAGATG+AGG 0.598683 7:-87002083 MsG0780041135.01.T01:CDS
GAGAGTTTGCAAATGTGGAA+AGG 0.598965 7:+87002399 None:intergenic
CAACTAGTTCAAACAAATAG+GGG 0.600096 7:-86997685 MsG0780041135.01.T01:three_prime_UTR
GTTGGGCCTTATGGGTCGGG+CGG 0.600341 7:+87003884 None:intergenic
TGATGGGGACAATGATCAAG+AGG 0.603621 7:-87002200 MsG0780041135.01.T01:CDS
AGGTGGAAACAATGGCCAGA+TGG 0.603883 7:+87002419 None:intergenic
AGAGCACTGGCGATGACTCA+CGG 0.605652 7:-86997712 MsG0780041135.01.T01:three_prime_UTR
GCTTCCACCTCATGGTTCAG+AGG 0.610025 7:-87002029 MsG0780041135.01.T01:CDS
CACCAGTATCCCGGCATGGT+AGG 0.611902 7:-86998035 MsG0780041135.01.T01:CDS
GGAGCATGTTGTTGAAAACC+TGG 0.612025 7:+86998060 None:intergenic
ACCTGCTCACCAGAATCTGT+GGG 0.613571 7:+87002229 None:intergenic
ATAATCTTACTCCCATCTGT+AGG 0.614931 7:-86997738 MsG0780041135.01.T01:three_prime_UTR
CCGAAATTCAGAGTCACCAG+GGG 0.615182 7:-87002272 MsG0780041135.01.T01:CDS
TAGTGAGCTGGGCTGACCCG+AGG 0.618827 7:-87001105 MsG0780041135.01.T01:CDS
CCCGAAATTCAGAGTCACCA+GGG 0.620516 7:-87002273 MsG0780041135.01.T01:CDS
AACGATAATAACCGTAATCG+TGG 0.621986 7:-86997976 MsG0780041135.01.T01:CDS
TGGCCCTGGAGTCATTTCGG+TGG 0.622046 7:-87001444 MsG0780041135.01.T01:CDS
ATTAGCATCTAAGGCTCTCG+AGG 0.629832 7:-87001790 MsG0780041135.01.T01:CDS
TGGAAGTGAAATCGAAGTCG+AGG 0.637979 7:+87003733 None:intergenic
CCATCACCAGTATCCCGGCA+TGG 0.641754 7:-86998039 MsG0780041135.01.T01:CDS
TGGTTCAGAGGTCTACATTG+GGG 0.645914 7:-87002017 MsG0780041135.01.T01:CDS
CAGAGTTCTAGCCGTAATCG+GGG 0.647049 7:-87001223 MsG0780041135.01.T01:CDS
CAAAGCCGAAAATTAATCTG+TGG 0.647057 7:-86997900 MsG0780041135.01.T01:three_prime_UTR
TAGAAGCTCTACAACTACAA+TGG 0.656732 7:+87003756 None:intergenic
CGATTACGGCTAGAACTCTG+TGG 0.668127 7:+87001226 None:intergenic
GTTCCACCGAAATGACTCCA+GGG 0.672546 7:+87001441 None:intergenic
TAGACCTCTGAACCATGAGG+TGG 0.673055 7:+87002025 None:intergenic
AGTGCTCTAAGCCTACAGAT+GGG 0.674526 7:+86997727 None:intergenic
GGTTCAGAGGTCTACATTGG+GGG 0.681072 7:-87002016 MsG0780041135.01.T01:CDS
ACCATACCATAACCAAGAGG+AGG 0.682760 7:+86998907 None:intergenic
TGATCAAGAGGAATCAAGCG+AGG 0.690783 7:-87002188 MsG0780041135.01.T01:CDS
GCTCCCGGACCATACATCAG+TGG 0.700475 7:+86998291 None:intergenic
ATGAAGGGGAAAGAAGCCAA+AGG 0.709242 7:-87001843 MsG0780041135.01.T01:CDS
CATGTAATAGGTCACCTGAG+AGG 0.716127 7:+87001063 None:intergenic
TGAGCAGGTAGATCTTGATG+GGG 0.733370 7:-87002215 MsG0780041135.01.T01:CDS
ATGTAGACCTCTGAACCATG+AGG 0.739451 7:+87002022 None:intergenic
CCAACCATACCATAACCAAG+AGG 0.748224 7:+86998904 None:intergenic
CGAAATTCAGAGTCACCAGG+GGG 0.748282 7:-87002271 MsG0780041135.01.T01:CDS
ACGAATTCACTATTTCTCGG+CGG 0.751684 7:+87003839 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGAAATCAATAATTCATT+AGG + Chr7:87002106-87002125 None:intergenic 15.0%
!! AACATACATAATTACAATAA+AGG + Chr7:86998746-86998765 None:intergenic 15.0%
!! ACATATAATAGAAAAATTGT+TGG + Chr7:87000105-87000124 None:intergenic 15.0%
!! ATAGTTTAAGTAACAAAAAA+AGG + Chr7:87000166-87000185 None:intergenic 15.0%
!! ATTCTATTGAATATCTTTAT+GGG - Chr7:87003078-87003097 MsG0780041135.01.T01:intron 15.0%
!! GAATAAATTTAGAAACAAAT+TGG - Chr7:87001756-87001775 MsG0780041135.01.T01:intron 15.0%
!!! AATTTTTATGTTTCTTCTAA+AGG + Chr7:87002804-87002823 None:intergenic 15.0%
!!! AGAAGTAACTTTTTTTTTTA+TGG + Chr7:87001261-87001280 None:intergenic 15.0%
!!! AGATTTTTTTTTTTTTGTTG+TGG + Chr7:86998147-86998166 None:intergenic 15.0%
!!! TTTTATTCTTGTAATTTGTA+AGG - Chr7:87003861-87003880 MsG0780041135.01.T01:five_prime_UTR 15.0%
!! AAAAATAAAGTAAGAACAAC+AGG - Chr7:86998518-86998537 MsG0780041135.01.T01:intron 20.0%
!! AATAAAAAAAACTTCACTCA+CGG + Chr7:87003848-87003867 None:intergenic 20.0%
!! AATGTACAAAATTGAAAGTT+GGG + Chr7:87000799-87000818 None:intergenic 20.0%
!! CATTAATCTCAAAAAAATGA+GGG - Chr7:87002720-87002739 MsG0780041135.01.T01:intron 20.0%
!! CATTCTATTGAATATCTTTA+TGG - Chr7:87003077-87003096 MsG0780041135.01.T01:intron 20.0%
!! TAATGTACAAAATTGAAAGT+TGG + Chr7:87000800-87000819 None:intergenic 20.0%
!! TACATTAGTAAGGATTATAT+CGG + Chr7:87003563-87003582 None:intergenic 20.0%
!! TATAAGGTAAAAAAAAGATG+AGG + Chr7:86998059-86998078 None:intergenic 20.0%
!! TATTAAGGTTAAGGTAAAAA+TGG + Chr7:87001792-87001811 None:intergenic 20.0%
!! TCATTAATCTCAAAAAAATG+AGG - Chr7:87002719-87002738 MsG0780041135.01.T01:intron 20.0%
!! TTAAGTAACAAAAAAAGGAA+AGG + Chr7:87000161-87000180 None:intergenic 20.0%
!! TTCTATTGAATATCTTTATG+GGG - Chr7:87003079-87003098 MsG0780041135.01.T01:intron 20.0%
!! TTGAAATGTTTAAACAAACA+CGG - Chr7:87001475-87001494 MsG0780041135.01.T01:CDS 20.0%
!!! AAACTTCTGAAAAAGATTTA+AGG - Chr7:86999525-86999544 MsG0780041135.01.T01:intron 20.0%
!!! AAATATTTTATCCATTAAGC+TGG - Chr7:86999882-86999901 MsG0780041135.01.T01:intron 20.0%
!!! AACTTCTGAAAAAGATTTAA+GGG - Chr7:86999526-86999545 MsG0780041135.01.T01:intron 20.0%
!!! AATCTAGAGATTTTCTTTAA+AGG - Chr7:86998083-86998102 MsG0780041135.01.T01:intron 20.0%
!!! ATTTTGTACATTACCATAAA+TGG - Chr7:87000807-87000826 MsG0780041135.01.T01:intron 20.0%
!!! CTTTTTTTTTTGGATAAACA+TGG - Chr7:86997957-86997976 MsG0780041135.01.T01:CDS 20.0%
!!! TTATTTTGAAGTGTTTGTTT+AGG + Chr7:86998246-86998265 None:intergenic 20.0%
!!! TTGTCATTTTCTGTAATATT+TGG - Chr7:86999784-86999803 MsG0780041135.01.T01:intron 20.0%
!!! TTTTACCTTAACCTTAATAA+TGG - Chr7:87001793-87001812 MsG0780041135.01.T01:CDS 20.0%
!!! TTTTTTCATTTATAAACGTG+TGG - Chr7:86998769-86998788 MsG0780041135.01.T01:intron 20.0%
!!! TTTTTTTTTCAAAAACAGAG+AGG + Chr7:86998207-86998226 None:intergenic 20.0%
! AACTGATTATTAACAAGTCA+TGG - Chr7:86999820-86999839 MsG0780041135.01.T01:intron 25.0%
! AAGAGAAAAAACTTAAGTGT+AGG - Chr7:87000525-87000544 MsG0780041135.01.T01:intron 25.0%
! AAGTAAAATGGAAGTAGAAT+AGG + Chr7:87000645-87000664 None:intergenic 25.0%
! AATAATTCATTAGGAACAAC+AGG + Chr7:87002097-87002116 None:intergenic 25.0%
! AATCTCTAGATTACAGTATA+AGG + Chr7:86998075-86998094 None:intergenic 25.0%
! ATGTACAAAATTGAAAGTTG+GGG + Chr7:87000798-87000817 None:intergenic 25.0%
! ATGTATTGTAAGTTTCATCT+TGG - Chr7:87003295-87003314 MsG0780041135.01.T01:intron 25.0%
! ATTCTGAATGAAAAATCAAG+AGG + Chr7:86998974-86998993 None:intergenic 25.0%
! ATTCTTCCATTTATTGAAAG+TGG - Chr7:87001192-87001211 MsG0780041135.01.T01:CDS 25.0%
! CAAAAAAGACTAAAACTAGA+AGG + Chr7:87002696-87002715 None:intergenic 25.0%
! CTAGGTTAAGATTGAAAAAA+GGG + Chr7:87000676-87000695 None:intergenic 25.0%
! TAAATAGAACAATCATGCTA+TGG - Chr7:86997889-86997908 MsG0780041135.01.T01:three_prime_UTR 25.0%
! TAGGAACAATTACATTAGTA+AGG + Chr7:87003573-87003592 None:intergenic 25.0%
! TAGGTTAAGATTGAAAAAAG+GGG + Chr7:87000675-87000694 None:intergenic 25.0%
! TAGTTATACCACAATTTAAC+TGG - Chr7:86998862-86998881 MsG0780041135.01.T01:CDS 25.0%
! TCAACTAGTTCAAACAAATA+GGG - Chr7:87003821-87003840 MsG0780041135.01.T01:five_prime_UTR 25.0%
! TCTAGGTTAAGATTGAAAAA+AGG + Chr7:87000677-87000696 None:intergenic 25.0%
! TGGAAAACAGTATTCAAAAA+GGG + Chr7:87002424-87002443 None:intergenic 25.0%
! TGGTATAAAACTCATGTAAT+AGG + Chr7:87000459-87000478 None:intergenic 25.0%
! TGTCATTAAGAAACATAGAT+TGG + Chr7:87002444-87002463 None:intergenic 25.0%
! TTAAGTGTTCGAAATTTCAA+TGG - Chr7:87003041-87003060 MsG0780041135.01.T01:intron 25.0%
! TTAAGTTCATGTTTGGATTA+CGG - Chr7:86998018-86998037 MsG0780041135.01.T01:CDS 25.0%
! TTACATGATCTTAATTAGCA+TGG - Chr7:87001836-87001855 MsG0780041135.01.T01:CDS 25.0%
! TTATTAAGCCTAAAAGAACT+TGG - Chr7:87003134-87003153 MsG0780041135.01.T01:intron 25.0%
! TTCTTCAATTGATTGTTGAT+GGG - Chr7:87002925-87002944 MsG0780041135.01.T01:intron 25.0%
! TTGGAAAACAGTATTCAAAA+AGG + Chr7:87002425-87002444 None:intergenic 25.0%
! TTTCTTCAATTGATTGTTGA+TGG - Chr7:87002924-87002943 MsG0780041135.01.T01:intron 25.0%
!! ATACTCTAATGAGATGTTTT+AGG + Chr7:87001585-87001604 None:intergenic 25.0%
!! ATGTAATTTTCAAAATGCAC+AGG - Chr7:87000766-87000785 MsG0780041135.01.T01:intron 25.0%
!! ATGTGACAAATTGAAGTTTT+GGG - Chr7:87001167-87001186 MsG0780041135.01.T01:CDS 25.0%
!! GTAATGTTTAAGTTCATGTT+TGG - Chr7:86998011-86998030 MsG0780041135.01.T01:CDS 25.0%
!! TCATTTTCTGTAATATTTGG+TGG - Chr7:86999787-86999806 MsG0780041135.01.T01:intron 25.0%
!! TGTTGGAAATGTTTGAAATA+TGG + Chr7:87000616-87000635 None:intergenic 25.0%
!! TTTAAGTCTAAGATTCTACT+TGG - Chr7:87003904-87003923 MsG0780041135.01.T01:five_prime_UTR 25.0%
!! TTTTTATAGCAGAATCACAT+TGG - Chr7:86998348-86998367 MsG0780041135.01.T01:intron 25.0%
!! TTTTTCTCTTTATTACCTTG+CGG + Chr7:87000515-87000534 None:intergenic 25.0%
!!! CATAGCATAGCTTTTTTTTT+TGG - Chr7:86997947-86997966 MsG0780041135.01.T01:exon 25.0%
!!! CATTGGTTTAAATTTAGACA+TGG - Chr7:86998365-86998384 MsG0780041135.01.T01:intron 25.0%
!!! CGTTTGTTTAGGATTTTTTT+GGG + Chr7:86998313-86998332 None:intergenic 25.0%
!!! GTTTGTTTAGGATTTTTTTG+GGG + Chr7:86998312-86998331 None:intergenic 25.0%
!!! TCAATTTTTGGACAAAAATC+AGG - Chr7:87000848-87000867 MsG0780041135.01.T01:intron 25.0%
AAAAAAAGATGAGGTTTGTG+AGG + Chr7:86998050-86998069 None:intergenic 30.0%
AACAGAGCTTAGACATAAAA+AGG - Chr7:87001690-87001709 MsG0780041135.01.T01:intron 30.0%
AAGAAAGCTATTTAGACTAC+AGG - Chr7:87001667-87001686 MsG0780041135.01.T01:intron 30.0%
AAGAGGTTAACATCAATTCT+TGG - Chr7:87002978-87002997 MsG0780041135.01.T01:intron 30.0%
AATAAATTGCTTCCCATCAT+AGG + Chr7:87003740-87003759 None:intergenic 30.0%
AATATGGCAGTGGAATAATA+TGG + Chr7:87000600-87000619 None:intergenic 30.0%
AATCTCAAAAAAATGAGGGT+TGG - Chr7:87002724-87002743 MsG0780041135.01.T01:intron 30.0%
ACTAATGTAATTGTTCCTAC+TGG - Chr7:87003574-87003593 MsG0780041135.01.T01:intron 30.0%
ACTTCTTCTAATACGTATCA+TGG - Chr7:87001045-87001064 MsG0780041135.01.T01:intron 30.0%
AGAAATAATTTGACTGCGTA+TGG + Chr7:87001395-87001414 None:intergenic 30.0%
AGATAAGGGTAAAAAATGCA+AGG + Chr7:87003714-87003733 None:intergenic 30.0%
AGGATAGCATATTTGGATAA+TGG + Chr7:86998680-86998699 None:intergenic 30.0%
AGTAGAATAGGTTATGTTGT+TGG + Chr7:87000633-87000652 None:intergenic 30.0%
ATCTCAAAAAAATGAGGGTT+GGG - Chr7:87002725-87002744 MsG0780041135.01.T01:intron 30.0%
ATGGTTTGATAGGAGAATAA+GGG + Chr7:86998647-86998666 None:intergenic 30.0%
CAACTAGTTCAAACAAATAG+GGG - Chr7:87003822-87003841 MsG0780041135.01.T01:five_prime_UTR 30.0%
CAGAAAGCAAACATTAATGT+TGG + Chr7:87001971-87001990 None:intergenic 30.0%
CTAATTAAGATCATGTAACC+TGG + Chr7:87001834-87001853 None:intergenic 30.0%
CTCAACTAGTTCAAACAAAT+AGG - Chr7:87003820-87003839 MsG0780041135.01.T01:five_prime_UTR 30.0%
GATAGAAACTCAACTATAGA+TGG + Chr7:87003401-87003420 None:intergenic 30.0%
GGATAGCATATTTGGATAAT+GGG + Chr7:86998679-86998698 None:intergenic 30.0%
GTGATCCATTATTAAGGTTA+AGG + Chr7:87001801-87001820 None:intergenic 30.0%
GTTTAGACAGTCATGTAAAA+GGG + Chr7:86999617-86999636 None:intergenic 30.0%
TAAATATGAAACAGCTAGCT+AGG + Chr7:87000255-87000274 None:intergenic 30.0%
TATCATACAATGAAGCTCAT+AGG + Chr7:86998700-86998719 None:intergenic 30.0%
TATGAGAAAATTTGCAGAAC+AGG - Chr7:87003634-87003653 MsG0780041135.01.T01:intron 30.0%
TATTTGTTTATGCTCTTGCA+TGG - Chr7:87003332-87003351 MsG0780041135.01.T01:intron 30.0%
TCACTTGACATGAAAAAAAG+AGG - Chr7:87000880-87000899 MsG0780041135.01.T01:intron 30.0%
TTAAGATTGAAAAAAGGGGT+GGG + Chr7:87000671-87000690 None:intergenic 30.0%
TTAATGTTGGCAACAAAATG+AGG + Chr7:87001958-87001977 None:intergenic 30.0%
TTACCTATGCAAAAGTCAAT+CGG + Chr7:86999639-86999658 None:intergenic 30.0%
TTACTGGTGATCCATTATTA+AGG + Chr7:87001807-87001826 None:intergenic 30.0%
TTGAACTGTATCAATTTCAC+TGG - Chr7:87002870-87002889 MsG0780041135.01.T01:intron 30.0%
TTGTGGTATAACTATTTGTC+AGG + Chr7:86998856-86998875 None:intergenic 30.0%
TTGTTATATCTGTTTGTGTG+TGG - Chr7:87000548-87000567 MsG0780041135.01.T01:intron 30.0%
TTGTTTCACTAGCATAACAA+CGG - Chr7:87003373-87003392 MsG0780041135.01.T01:intron 30.0%
TTTAGACAGTCATGTAAAAG+GGG + Chr7:86999616-86999635 None:intergenic 30.0%
! AAATGTTTGAAATATGGCAG+TGG + Chr7:87000610-87000629 None:intergenic 30.0%
! ACAGATTAATTTTCGGCTTT+GGG + Chr7:87003608-87003627 None:intergenic 30.0%
! ACATGCCACAGATTAATTTT+CGG + Chr7:87003615-87003634 None:intergenic 30.0%
! CATGTGACAAATTGAAGTTT+TGG - Chr7:87001166-87001185 MsG0780041135.01.T01:CDS 30.0%
! CGTGAAAATTTTATCCAGTT+GGG - Chr7:87002836-87002855 MsG0780041135.01.T01:intron 30.0%
! GAAAAAAAGAGGTACATGAA+TGG - Chr7:87000891-87000910 MsG0780041135.01.T01:intron 30.0%
! TCGTGAAAATTTTATCCAGT+TGG - Chr7:87002835-87002854 MsG0780041135.01.T01:intron 30.0%
! TTAACTGGCCAAAATTTTCT+GGG - Chr7:86998877-86998896 MsG0780041135.01.T01:CDS 30.0%
! TTTAACTGGCCAAAATTTTC+TGG - Chr7:86998876-86998895 MsG0780041135.01.T01:CDS 30.0%
! TTTTCTCTTTATTACCTTGC+GGG + Chr7:87000514-87000533 None:intergenic 30.0%
!! AATGAAGGCATTGAAGAATA+CGG - Chr7:87002367-87002386 MsG0780041135.01.T01:five_prime_UTR 30.0%
!! AATTTTGGCCAGTTAAATTG+TGG + Chr7:86998873-86998892 None:intergenic 30.0%
!! ACTCTGAATTCAAGGTATTT+TGG - Chr7:86999749-86999768 MsG0780041135.01.T01:intron 30.0%
!! ATTGACTTTTGCATAGGTAA+GGG - Chr7:86999639-86999658 MsG0780041135.01.T01:intron 30.0%
!! ATTTTTCAAAGCTCAGTGTA+AGG + Chr7:87000971-87000990 None:intergenic 30.0%
!! GAGTTGATGTTGATGTATAA+AGG - Chr7:86997599-86997618 MsG0780041135.01.T01:three_prime_UTR 30.0%
!! TGGGTTTTATAATGGTACAT+TGG + Chr7:87000935-87000954 None:intergenic 30.0%
!! TGTCAAAGTGGGTTTTATAA+TGG + Chr7:87000943-87000962 None:intergenic 30.0%
!! TTTTTCAAAGCTCAGTGTAA+GGG + Chr7:87000970-87000989 None:intergenic 30.0%
!!! GCGTTTGTTTAGGATTTTTT+TGG + Chr7:86998314-86998333 None:intergenic 30.0%
!!! TTTTTTTCATGTCAAGTGAC+TGG + Chr7:87000879-87000898 None:intergenic 30.0%
AAAATTTGCAGAACAGGCAT+AGG - Chr7:87003640-87003659 MsG0780041135.01.T01:intron 35.0%
AAAGAGCTGTTTGAACATCA+TGG - Chr7:87002254-87002273 MsG0780041135.01.T01:CDS 35.0%
AAATATACACAGAGGAAGAG+AGG + Chr7:86998829-86998848 None:intergenic 35.0%
AAATTTCCTGATCCAGTAAG+AGG + Chr7:87001916-87001935 None:intergenic 35.0%
AACGATAATAACCGTAATCG+TGG - Chr7:87003531-87003550 MsG0780041135.01.T01:intron 35.0%
AAGAAGAGAGTTTGCAAATG+TGG + Chr7:86999116-86999135 None:intergenic 35.0%
AATATACACAGAGGAAGAGA+GGG + Chr7:86998828-86998847 None:intergenic 35.0%
ACGTATTAGAAGAAGTCTGT+TGG + Chr7:87001041-87001060 None:intergenic 35.0%
AGAGCTTAGACATAAAAAGG+AGG - Chr7:87001693-87001712 MsG0780041135.01.T01:intron 35.0%
AGAGGATAACAATGCTCAAA+AGG + Chr7:86998956-86998975 None:intergenic 35.0%
AGATGAGTCATGAGAAAGAA+TGG + Chr7:87001371-87001390 None:intergenic 35.0%
AGCTCATAGGATAGCATATT+TGG + Chr7:86998687-86998706 None:intergenic 35.0%
AGTTGAGTATGAAGAAGTAG+AGG - Chr7:86999346-86999365 MsG0780041135.01.T01:intron 35.0%
ATAATCTTACTCCCATCTGT+AGG - Chr7:87003769-87003788 MsG0780041135.01.T01:five_prime_UTR 35.0%
ATGATGATTCAGAATTCCTC+GGG + Chr7:87000421-87000440 None:intergenic 35.0%
ATGCTTGTGCAGAATATTCA+AGG - Chr7:87000333-87000352 MsG0780041135.01.T01:intron 35.0%
ATGTTGGGTAATATTTGCCT+TGG - Chr7:87000198-87000217 MsG0780041135.01.T01:intron 35.0%
CAAAACATAAATCACCCAAC+TGG + Chr7:87002853-87002872 None:intergenic 35.0%
CAAAGCCGAAAATTAATCTG+TGG - Chr7:87003607-87003626 MsG0780041135.01.T01:intron 35.0%
CATGGTTTGATAGGAGAATA+AGG + Chr7:86998648-86998667 None:intergenic 35.0%
CCAAAAATTGACAAAGCCAA+TGG + Chr7:87000839-87000858 None:intergenic 35.0%
CCATAAATGGCTAAAACCAT+TGG - Chr7:87000820-87000839 MsG0780041135.01.T01:intron 35.0%
CCCATCATAGGAAAAGATAA+GGG + Chr7:87003728-87003747 None:intergenic 35.0%
CTGCAATTAGTTGAACCAAA+TGG - Chr7:87002063-87002082 MsG0780041135.01.T01:CDS 35.0%
CTTATTCTCCTATCAAACCA+TGG - Chr7:86998646-86998665 MsG0780041135.01.T01:intron 35.0%
GACAAAGGAATTAGCATCTA+AGG - Chr7:86999708-86999727 MsG0780041135.01.T01:intron 35.0%
GACTGTAGAAGATATGAAGA+AGG - Chr7:87000027-87000046 MsG0780041135.01.T01:intron 35.0%
GATGATGATTCAGAATTCCT+CGG + Chr7:87000422-87000441 None:intergenic 35.0%
GCAACAAAAGTAAGAAAGAC+AGG + Chr7:86999006-86999025 None:intergenic 35.0%
GGTTTAGACAGTCATGTAAA+AGG + Chr7:86999618-86999637 None:intergenic 35.0%
GTAAGGGATAATGTCAAAGT+GGG + Chr7:87000954-87000973 None:intergenic 35.0%
GTACTTAGAGCAAAGTTGAA+GGG + Chr7:87000737-87000756 None:intergenic 35.0%
GTTAAGATTGAAAAAAGGGG+TGG + Chr7:87000672-87000691 None:intergenic 35.0%
GTTGAACAACTCTGAATTCA+AGG - Chr7:86999741-86999760 MsG0780041135.01.T01:intron 35.0%
TAAAAGCAAATCCCCGATTA+CGG + Chr7:87000298-87000317 None:intergenic 35.0%
TAAGATTGAAAAAAGGGGTG+GGG + Chr7:87000670-87000689 None:intergenic 35.0%
TAGAAGCTCTACAACTACAA+TGG + Chr7:86997754-86997773 None:intergenic 35.0%
TAGACATAGACAATAGCAGA+AGG - Chr7:87000693-87000712 MsG0780041135.01.T01:intron 35.0%
TATGAAGTGTGTTGCATGTT+GGG - Chr7:87000183-87000202 MsG0780041135.01.T01:intron 35.0%
TATTAGAAGAAGTCTGTTGG+AGG + Chr7:87001038-87001057 None:intergenic 35.0%
TCAAAATGTCAGCAAGCAAT+TGG + Chr7:87001130-87001149 None:intergenic 35.0%
TCATGGAAAGATCACAAAAG+TGG - Chr7:87002271-87002290 MsG0780041135.01.T01:CDS 35.0%
TCCCATCATAGGAAAAGATA+AGG + Chr7:87003729-87003748 None:intergenic 35.0%
TCTAGATTCATAGAATGCCT+GGG - Chr7:86999189-86999208 MsG0780041135.01.T01:CDS 35.0%
TCTCAAAAAAATGAGGGTTG+GGG - Chr7:87002726-87002745 MsG0780041135.01.T01:intron 35.0%
TGCTAATTCCTTTGTCTTGA+AGG + Chr7:86999704-86999723 None:intergenic 35.0%
TGCTATAAAAACACACCCAA+AGG + Chr7:86998339-86998358 None:intergenic 35.0%
TGTAAGGGATAATGTCAAAG+TGG + Chr7:87000955-87000974 None:intergenic 35.0%
TGTACTTAGAGCAAAGTTGA+AGG + Chr7:87000738-87000757 None:intergenic 35.0%
TTAGACAGTCATGTAAAAGG+GGG + Chr7:86999615-86999634 None:intergenic 35.0%
TTCTAGATTCATAGAATGCC+TGG - Chr7:86999188-86999207 MsG0780041135.01.T01:CDS 35.0%
TTCTGCTATTGTCTATGTCT+AGG + Chr7:87000694-87000713 None:intergenic 35.0%
TTGATTGAAACTGTTCCATG+AGG + Chr7:86999050-86999069 None:intergenic 35.0%
TTGCAGTTGCAAATAGACAA+AGG + Chr7:87002049-87002068 None:intergenic 35.0%
TTTCGAAGAAGCGATATCTT+TGG - Chr7:87001995-87002014 MsG0780041135.01.T01:CDS 35.0%
! AAAAATAGAGCATCAAGCAG+TGG + Chr7:87001866-87001885 None:intergenic 35.0%
! ACCCTTATCTTTTCCTATGA+TGG - Chr7:87003724-87003743 MsG0780041135.01.T01:intron 35.0%
! ACGGAGAAGTATGAAATTGA+TGG - Chr7:87002386-87002405 MsG0780041135.01.T01:five_prime_UTR 35.0%
! ACTAAAATGCTGAGTTGAGA+GGG - Chr7:87001219-87001238 MsG0780041135.01.T01:CDS 35.0%
! AGCAATATCTAGAGCTTAAG+AGG + Chr7:86997820-86997839 None:intergenic 35.0%
! ATCTTCTTGTTTGTGACTGT+AGG - Chr7:87003418-87003437 MsG0780041135.01.T01:intron 35.0%
! CAATATCTAGAGCTTAAGAG+GGG + Chr7:86997818-86997837 None:intergenic 35.0%
! CACAGATTAATTTTCGGCTT+TGG + Chr7:87003609-87003628 None:intergenic 35.0%
! CAGATTAATTTTCGGCTTTG+GGG + Chr7:87003607-87003626 None:intergenic 35.0%
! CATAAGCACCAAGTTCTTTT+AGG + Chr7:87003145-87003164 None:intergenic 35.0%
! CCCTTATCTTTTCCTATGAT+GGG - Chr7:87003725-87003744 MsG0780041135.01.T01:intron 35.0%
! CGATTCTGAGTTATGTTTTC+TGG + Chr7:87002230-87002249 None:intergenic 35.0%
! GCAATATCTAGAGCTTAAGA+GGG + Chr7:86997819-86997838 None:intergenic 35.0%
! GCTAGCTGTTTCATATTTAC+AGG - Chr7:87000256-87000275 MsG0780041135.01.T01:intron 35.0%
! TCAATTTCACTGGTTGTAAG+TGG - Chr7:87002880-87002899 MsG0780041135.01.T01:intron 35.0%
! TCTGAGTTATGTTTTCTGGA+AGG + Chr7:87002226-87002245 None:intergenic 35.0%
! TGGACGAATTCACTATTTCT+CGG + Chr7:86997674-86997693 None:intergenic 35.0%
! TTAAACTAGCCTGCCAAAAT+TGG + Chr7:87003932-87003951 None:intergenic 35.0%
! TTTTGTGACCTTCAAGACAA+AGG - Chr7:86999693-86999712 MsG0780041135.01.T01:intron 35.0%
!! AAAAGAACTTGGTGCTTATG+TGG - Chr7:87003145-87003164 MsG0780041135.01.T01:intron 35.0%
!! AAACCGATTGACTTTTGCAT+AGG - Chr7:86999633-86999652 MsG0780041135.01.T01:intron 35.0%
!! AACCATCAAGTTTTCTGGAA+TGG - Chr7:87002474-87002493 MsG0780041135.01.T01:intron 35.0%
!! AGATTAATTTTCGGCTTTGG+GGG + Chr7:87003606-87003625 None:intergenic 35.0%
!! CCAAAATTTTCTGGGAAACT+CGG - Chr7:86998885-86998904 MsG0780041135.01.T01:CDS 35.0%
!! GATTGACTTTTGCATAGGTA+AGG - Chr7:86999638-86999657 MsG0780041135.01.T01:intron 35.0%
!! GTCTTGCCACTTTCAATAAA+TGG + Chr7:87001201-87001220 None:intergenic 35.0%
!! GTTAAGCATCGGTTATTCAT+TGG - Chr7:86999986-87000005 MsG0780041135.01.T01:intron 35.0%
!! GTTAGAGTTGATGATGTTCT+TGG + Chr7:87001075-87001094 None:intergenic 35.0%
!! GTTTTGTTCACTTTGCTGAT+AGG - Chr7:87002336-87002355 MsG0780041135.01.T01:five_prime_UTR 35.0%
!! TAAGTTTTATAACCGTGACC+TGG - Chr7:87002165-87002184 MsG0780041135.01.T01:CDS 35.0%
!! TGTAAGTGGTTCTGAACTTT+CGG - Chr7:87002894-87002913 MsG0780041135.01.T01:intron 35.0%
!! TTGGTAATGTTCCTAAAGAG+TGG - Chr7:87000005-87000024 MsG0780041135.01.T01:intron 35.0%
!! TTTCCATTTTGTGTGCTGAT+TGG - Chr7:87001884-87001903 MsG0780041135.01.T01:intron 35.0%
!!! AGCACTTTATTTTTCTTCCC+TGG + Chr7:86999955-86999974 None:intergenic 35.0%
!!! ATTCTACTTGGTGCCAATTT+TGG - Chr7:87003916-87003935 MsG0780041135.01.T01:five_prime_UTR 35.0%
!!! CAGTTTTGTTCTGTGTATGT+CGG + Chr7:87001622-87001641 None:intergenic 35.0%
!!! CCAATGGTTTTAGCCATTTA+TGG + Chr7:87000823-87000842 None:intergenic 35.0%
!!! CCATTGGCTTTGTCAATTTT+TGG - Chr7:87000836-87000855 MsG0780041135.01.T01:intron 35.0%
!!! TCTTTTTCAGAAGTTTCGTG+AGG + Chr7:86999521-86999540 None:intergenic 35.0%
AACCCTAAACTCGTAATCGT+TGG + Chr7:86997717-86997736 None:intergenic 40.0%
AATAACCGTAATCGTGGTCA+TGG - Chr7:87003537-87003556 MsG0780041135.01.T01:intron 40.0%
AATGGCTGATGTAGGCAATT+TGG - Chr7:87000909-87000928 MsG0780041135.01.T01:intron 40.0%
ACACAAAATGCAAGTAGCCA+AGG + Chr7:87000218-87000237 None:intergenic 40.0%
ACATATGCAATCCTTCCATC+TGG + Chr7:87003279-87003298 None:intergenic 40.0%
ACATGGTTCTTGTCTCAGAA+TGG - Chr7:86998382-86998401 MsG0780041135.01.T01:intron 40.0%
AGAAGAAGAGGAAGAAGTAG+AGG - Chr7:86999391-86999410 MsG0780041135.01.T01:intron 40.0%
AGCCTCATCTTCTTCATCTA+AGG + Chr7:86999429-86999448 None:intergenic 40.0%
AGTTTGCAAATGTGGAAAGG+TGG + Chr7:86999108-86999127 None:intergenic 40.0%
ATAAACCGCAAGGGAATTTC+AGG + Chr7:87001010-87001029 None:intergenic 40.0%
ATAACGATGCAATAGTGAGC+TGG - Chr7:87000390-87000409 MsG0780041135.01.T01:intron 40.0%
ATATACACAGAGGAAGAGAG+GGG + Chr7:86998827-86998846 None:intergenic 40.0%
ATCTAGAAAAGCAAGCTTGC+AGG + Chr7:86999176-86999195 None:intergenic 40.0%
ATGGTTCAGAGGTCTACATT+GGG - Chr7:86999489-86999508 MsG0780041135.01.T01:intron 40.0%
ATGTGGAAAGGTGGAAACAA+TGG + Chr7:86999099-86999118 None:intergenic 40.0%
CAAGAAGTAACGCTTCCTTA+GGG - Chr7:86998417-86998436 MsG0780041135.01.T01:intron 40.0%
CACCATCTCAAGTTAAGCAT+CGG - Chr7:86999975-86999994 MsG0780041135.01.T01:intron 40.0%
CAGGAGACAAATATACACAG+AGG + Chr7:86998837-86998856 None:intergenic 40.0%
CATAGGTAAGGGTTATGAAG+GGG - Chr7:86999650-86999669 MsG0780041135.01.T01:intron 40.0%
CATGTAACCTGGCAATTTAC+TGG + Chr7:87001823-87001842 None:intergenic 40.0%
CCTAAACAAACGCATCCTTT+GGG - Chr7:86998321-86998340 MsG0780041135.01.T01:intron 40.0%
CTAACCACATCAACTGTCAA+AGG - Chr7:87001090-87001109 MsG0780041135.01.T01:CDS 40.0%
CTATGAAGTGTGTTGCATGT+TGG - Chr7:87000182-87000201 MsG0780041135.01.T01:intron 40.0%
CTCTCTTCTTTGTATGCTTC+TGG - Chr7:86999126-86999145 MsG0780041135.01.T01:CDS 40.0%
CTTCGATTTCACTTCCAATC+AGG - Chr7:86997780-86997799 MsG0780041135.01.T01:three_prime_UTR 40.0%
GAAGGTAAAGAGCAAGTTAC+CGG + Chr7:87002678-87002697 None:intergenic 40.0%
GAGAGTTTGCAAATGTGGAA+AGG + Chr7:86999111-86999130 None:intergenic 40.0%
GCATAGGTAAGGGTTATGAA+GGG - Chr7:86999649-86999668 MsG0780041135.01.T01:intron 40.0%
GCCTCATCTTCTTCATCTAA+GGG + Chr7:86999428-86999447 None:intergenic 40.0%
GGACAAGAAAAGAGCAGATA+TGG - Chr7:87002314-87002333 MsG0780041135.01.T01:exon 40.0%
GTCCATTCCAGAAAACTTGA+TGG + Chr7:87002479-87002498 None:intergenic 40.0%
GTTGCAAACCATGGTTTGAT+AGG + Chr7:86998657-86998676 None:intergenic 40.0%
GTTTATGCTCTTGCATGGTT+AGG - Chr7:87003337-87003356 MsG0780041135.01.T01:intron 40.0%
GTTTCTTAATGACAGCGAAC+TGG - Chr7:87002450-87002469 MsG0780041135.01.T01:five_prime_UTR 40.0%
TAAACCGCAAGGGAATTTCA+GGG + Chr7:87001009-87001028 None:intergenic 40.0%
TAACGATGCAATAGTGAGCT+GGG - Chr7:87000391-87000410 MsG0780041135.01.T01:intron 40.0%
TAGAGCTTAAGAGGGGAAAA+CGG + Chr7:86997811-86997830 None:intergenic 40.0%
TATGAAGAAGGTTGTTGCCA+AGG - Chr7:87000039-87000058 MsG0780041135.01.T01:intron 40.0%
TCAAGAAGTAACGCTTCCTT+AGG - Chr7:86998416-86998435 MsG0780041135.01.T01:intron 40.0%
TCCTAAACAAACGCATCCTT+TGG - Chr7:86998320-86998339 MsG0780041135.01.T01:intron 40.0%
TCTAGAAAAGCAAGCTTGCA+GGG + Chr7:86999175-86999194 None:intergenic 40.0%
TCTTACTCTGCTATTCCATC+TGG - Chr7:86999073-86999092 MsG0780041135.01.T01:intron 40.0%
TCTTCTACAGTCCACTCTTT+AGG + Chr7:87000019-87000038 None:intergenic 40.0%
TGAAACTGTTCCATGAGGTA+TGG + Chr7:86999045-86999064 None:intergenic 40.0%
TGAAATTCCCTTGCGGTTTA+TGG - Chr7:87001009-87001028 MsG0780041135.01.T01:intron 40.0%
TGAATCATCATCATCCTCTC+AGG - Chr7:87000430-87000449 MsG0780041135.01.T01:intron 40.0%
TGAGTATGAAGAAGTAGAGG+TGG - Chr7:86999349-86999368 MsG0780041135.01.T01:intron 40.0%
TGATAGGTCAAGTGCAATGA+AGG - Chr7:87002352-87002371 MsG0780041135.01.T01:five_prime_UTR 40.0%
TGCATAGGTAAGGGTTATGA+AGG - Chr7:86999648-86999667 MsG0780041135.01.T01:intron 40.0%
TGTGTTTGGGAGTTGAATTG+TGG + Chr7:86998624-86998643 None:intergenic 40.0%
TTTGGGAGTTGAATTGTGGA+GGG + Chr7:86998620-86998639 None:intergenic 40.0%
TTTGTTGCTATGCTACTCCT+TGG - Chr7:86999018-86999037 MsG0780041135.01.T01:intron 40.0%
! AACCGATGCTTAACTTGAGA+TGG + Chr7:86999980-86999999 None:intergenic 40.0%
! AAGGGTCTTTTGTCAATCTG+TGG - Chr7:86999544-86999563 MsG0780041135.01.T01:intron 40.0%
! ACGAATTCACTATTTCTCGG+CGG + Chr7:86997671-86997690 None:intergenic 40.0%
! AGGAGAATAAGGGTGTGTTT+GGG + Chr7:86998637-86998656 None:intergenic 40.0%
! AGGGTCTTTTGTCAATCTGT+GGG - Chr7:86999545-86999564 MsG0780041135.01.T01:intron 40.0%
! ATACAGCGTCTGTTTTGCTT+TGG + Chr7:87001555-87001574 None:intergenic 40.0%
! ATGCCAATGCTTTTACCAGA+TGG - Chr7:87003261-87003280 MsG0780041135.01.T01:intron 40.0%
! ATTGTAGCCAGTGTACTGAT+TGG + Chr7:87002772-87002791 None:intergenic 40.0%
! CAACAGGAAAGTACACCATT+TGG + Chr7:87002081-87002100 None:intergenic 40.0%
! CAATGCTTTTACCAGATGGA+AGG - Chr7:87003265-87003284 MsG0780041135.01.T01:intron 40.0%
! CCGAGTTTCCCAGAAAATTT+TGG + Chr7:86998888-86998907 None:intergenic 40.0%
! CTAAAATGCTGAGTTGAGAG+GGG - Chr7:87001220-87001239 MsG0780041135.01.T01:CDS 40.0%
! CTGGTAACCATCAAGTTTTC+TGG - Chr7:87002469-87002488 MsG0780041135.01.T01:intron 40.0%
! CTTCCATCTGGTAAAAGCAT+TGG + Chr7:87003267-87003286 None:intergenic 40.0%
! GACTAAAATGCTGAGTTGAG+AGG - Chr7:87001218-87001237 MsG0780041135.01.T01:CDS 40.0%
! GGTCACAAAAGCATAACCTT+TGG + Chr7:86999683-86999702 None:intergenic 40.0%
! TAAAATGCTGAGTTGAGAGG+GGG - Chr7:87001221-87001240 MsG0780041135.01.T01:CDS 40.0%
! TAGGAGAATAAGGGTGTGTT+TGG + Chr7:86998638-86998657 None:intergenic 40.0%
! TTGTCCTTTGACAGTTGATG+TGG + Chr7:87001097-87001116 None:intergenic 40.0%
!! TGTGTTTGCGAGTTGGATTT+TGG - Chr7:86998440-86998459 MsG0780041135.01.T01:intron 40.0%
!! TTTGCGAGTTGGATTTTGGA+GGG - Chr7:86998444-86998463 MsG0780041135.01.T01:intron 40.0%
!! TTTTCTTGTCCAGCTTTAGC+AGG + Chr7:87002305-87002324 None:intergenic 40.0%
AAGAAGGTTGTTGCCAAGGT+TGG - Chr7:87000043-87000062 MsG0780041135.01.T01:intron 45.0%
AATGTGCAGCCACTGATGTA+TGG - Chr7:87003207-87003226 MsG0780041135.01.T01:intron 45.0%
ACAACCCTGAAATTCCCTTG+CGG - Chr7:87001002-87001021 MsG0780041135.01.T01:intron 45.0%
ACCATACCATAACCAAGAGG+AGG + Chr7:87002603-87002622 None:intergenic 45.0%
ACCTCCTCTTGGTTATGGTA+TGG - Chr7:87002599-87002618 MsG0780041135.01.T01:intron 45.0%
ACCTCTTTCAGCCTATGATG+AGG + Chr7:87002965-87002984 None:intergenic 45.0%
ACTACATGCAGCCAGCTTAA+TGG + Chr7:86999896-86999915 None:intergenic 45.0%
AGTGGAAGAGGAAGAAGAAG+AGG - Chr7:86999379-86999398 MsG0780041135.01.T01:intron 45.0%
ATACCATAACCAAGAGGAGG+TGG + Chr7:87002600-87002619 None:intergenic 45.0%
ATGAAGGGGAAAGAAGCCAA+AGG - Chr7:86999664-86999683 MsG0780041135.01.T01:intron 45.0%
ATGTAGACCTCTGAACCATG+AGG + Chr7:86999488-86999507 None:intergenic 45.0%
CAAGCAGATCAGAAGTCATC+TGG - Chr7:87002534-87002553 MsG0780041135.01.T01:intron 45.0%
CATGGTTCAGAGGTCTACAT+TGG - Chr7:86999488-86999507 MsG0780041135.01.T01:intron 45.0%
CATGTAATAGGTCACCTGAG+AGG + Chr7:87000447-87000466 None:intergenic 45.0%
CATTTCGGTGGAACTGTTGA+AGG - Chr7:87000075-87000094 MsG0780041135.01.T01:intron 45.0%
CCAACCATACCATAACCAAG+AGG + Chr7:87002606-87002625 None:intergenic 45.0%
CCCAAAGGATGCGTTTGTTT+AGG + Chr7:86998324-86998343 None:intergenic 45.0%
CCTCCAATCAGCACACAAAA+TGG + Chr7:87001890-87001909 None:intergenic 45.0%
CCTCTTGGTTATGGTATGGT+TGG - Chr7:87002603-87002622 MsG0780041135.01.T01:intron 45.0%
CCTCTTTCAGCCTATGATGA+GGG + Chr7:87002964-87002983 None:intergenic 45.0%
CCTGAAAAACCCACAGATTC+TGG - Chr7:86999269-86999288 MsG0780041135.01.T01:CDS 45.0%
CGCCAACGATTACGAGTTTA+GGG - Chr7:86997712-86997731 MsG0780041135.01.T01:three_prime_UTR 45.0%
CTCTTTCAGCCTATGATGAG+GGG + Chr7:87002963-87002982 None:intergenic 45.0%
CTTCATCTCAGCTCTGTTCT+GGG + Chr7:87001650-87001669 None:intergenic 45.0%
CTTGGTTATGGTATGGTTGG+AGG - Chr7:87002606-87002625 MsG0780041135.01.T01:intron 45.0%
GAATGGACCAGGTCAAACTT+TGG - Chr7:87002491-87002510 MsG0780041135.01.T01:intron 45.0%
GAGCATTCCAAAGTTTGACC+TGG + Chr7:87002501-87002520 None:intergenic 45.0%
GATGACTTCTGATCTGCTTG+TGG + Chr7:87002534-87002553 None:intergenic 45.0%
GATGCTTCCAATCAGTACAC+TGG - Chr7:87002762-87002781 MsG0780041135.01.T01:intron 45.0%
GCCCTTAGATGAAGAAGATG+AGG - Chr7:86999424-86999443 MsG0780041135.01.T01:intron 45.0%
GGAGCATGTTGTTGAAAACC+TGG + Chr7:87003450-87003469 None:intergenic 45.0%
GGTAAAAAATGCAAGGCAGC+AGG + Chr7:87003707-87003726 None:intergenic 45.0%
GGTACATGAATGGCTGATGT+AGG - Chr7:87000901-87000920 MsG0780041135.01.T01:intron 45.0%
GTATGAAGAAGTAGAGGTGG+AGG - Chr7:86999352-86999371 MsG0780041135.01.T01:intron 45.0%
GTGAGCAGGTAGATCTTGAT+GGG - Chr7:86999291-86999310 MsG0780041135.01.T01:CDS 45.0%
GTTTGGGAGTTGAATTGTGG+AGG + Chr7:86998621-86998640 None:intergenic 45.0%
TATCCACCTCCTCTTGGTTA+TGG - Chr7:87002594-87002613 MsG0780041135.01.T01:intron 45.0%
TCTGTTTGTGTGTGGCTGAA+TGG - Chr7:87000556-87000575 MsG0780041135.01.T01:intron 45.0%
TCTTCATCTCAGCTCTGTTC+TGG + Chr7:87001651-87001670 None:intergenic 45.0%
TGAAACAGCTAGCTAGGTCA+AGG + Chr7:87000249-87000268 None:intergenic 45.0%
TGAGCAGGTAGATCTTGATG+GGG - Chr7:86999292-86999311 MsG0780041135.01.T01:CDS 45.0%
TGATCAAGAGGAATCAAGCG+AGG - Chr7:86999319-86999338 MsG0780041135.01.T01:intron 45.0%
TGATGGGGACAATGATCAAG+AGG - Chr7:86999307-86999326 MsG0780041135.01.T01:CDS 45.0%
TGGAAGTGAAATCGAAGTCG+AGG + Chr7:86997777-86997796 None:intergenic 45.0%
TGGATCACCAGTAAATTGCC+AGG - Chr7:87001813-87001832 MsG0780041135.01.T01:CDS 45.0%
TGGTTCAGAGGTCTACATTG+GGG - Chr7:86999490-86999509 MsG0780041135.01.T01:intron 45.0%
TTCGTAAATCACTTCCCGCA+AGG - Chr7:87000497-87000516 MsG0780041135.01.T01:intron 45.0%
TTGTCAATCTGTGGGAGAAG+TGG - Chr7:86999553-86999572 MsG0780041135.01.T01:intron 45.0%
TTTCACCTGTACTAAGCACC+AGG + Chr7:87002186-87002205 None:intergenic 45.0%
! AAAATGCTGAGTTGAGAGGG+GGG - Chr7:87001222-87001241 MsG0780041135.01.T01:CDS 45.0%
! ACAGAGTTCTAGCCGTAATC+GGG - Chr7:87000283-87000302 MsG0780041135.01.T01:intron 45.0%
! AGTGCTCTAAGCCTACAGAT+GGG + Chr7:87003783-87003802 None:intergenic 45.0%
! ATTAGCATCTAAGGCTCTCG+AGG - Chr7:86999717-86999736 MsG0780041135.01.T01:intron 45.0%
! CACAGAGTTCTAGCCGTAAT+CGG - Chr7:87000282-87000301 MsG0780041135.01.T01:intron 45.0%
! CCAGAATCTGTGGGTTTTTC+AGG + Chr7:86999272-86999291 None:intergenic 45.0%
! GCATCTTTTTGTCTTGTCCC+AGG + Chr7:86999209-86999228 None:intergenic 45.0%
!! GGAAAACGGAAGTACCTGAT+TGG + Chr7:86997797-86997816 None:intergenic 45.0%
!! GGATAATGGGTTGCAAACCA+TGG + Chr7:86998666-86998685 None:intergenic 45.0%
!! GGTTTTACGTTGGGCCTTAT+GGG + Chr7:86997634-86997653 None:intergenic 45.0%
!! GTCCAGATGGGTTTTACGTT+GGG + Chr7:86997643-86997662 None:intergenic 45.0%
!! GTTTGCGAGTTGGATTTTGG+AGG - Chr7:86998443-86998462 MsG0780041135.01.T01:intron 45.0%
!! TGGAAGCATCTTCTTAGCCT+AGG + Chr7:87002752-87002771 None:intergenic 45.0%
!! TGTCCAGATGGGTTTTACGT+TGG + Chr7:86997644-86997663 None:intergenic 45.0%
!! TTGCGAGTTGGATTTTGGAG+GGG - Chr7:86998445-86998464 MsG0780041135.01.T01:intron 45.0%
!!! CAAGTTTTCTGGAATGGACC+AGG - Chr7:87002480-87002499 MsG0780041135.01.T01:intron 45.0%
!!! CCATTTTGTGTGCTGATTGG+AGG - Chr7:87001887-87001906 MsG0780041135.01.T01:intron 45.0%
!!! TAAGTAGCGGCTGTCGTTTT+AGG - Chr7:86997553-86997572 MsG0780041135.01.T01:three_prime_UTR 45.0%
!!! TACTTGGTGCCAATTTTGGC+AGG - Chr7:87003920-87003939 MsG0780041135.01.T01:five_prime_UTR 45.0%
!!! TTAATTTTCGGCTTTGGGGG+AGG + Chr7:87003603-87003622 None:intergenic 45.0%
!!! AAATTTTAAATTTAAATCTT+TGG + Chr7:87000479-87000498 None:intergenic 5.0%
AAAAATGAGGGTTGGGGCCT+AGG - Chr7:87002732-87002751 MsG0780041135.01.T01:intron 50.0%
ACCTGCTCACCAGAATCTGT+GGG + Chr7:86999281-86999300 None:intergenic 50.0%
ACTCCTTGGTCCATACCTCA+TGG - Chr7:86999032-86999051 MsG0780041135.01.T01:intron 50.0%
AGCGAGAGAGCAAGAGAGAT+AGG + Chr7:87003172-87003191 None:intergenic 50.0%
AGCTTGCAGGGCAACTATGA+AGG + Chr7:86999163-86999182 None:intergenic 50.0%
AGGGGTGGGGTGAAGTAAAA+TGG + Chr7:87000657-87000676 None:intergenic 50.0%
AGGTGGAAACAATGGCCAGA+TGG + Chr7:86999091-86999110 None:intergenic 50.0%
AGGTGTCCTCTTACTGGATC+AGG - Chr7:87001907-87001926 MsG0780041135.01.T01:intron 50.0%
AGTAGAGGTGGAGGAAGAAG+TGG - Chr7:86999361-86999380 MsG0780041135.01.T01:intron 50.0%
AGTTCCACCGAAATGACTCC+AGG + Chr7:87000070-87000089 None:intergenic 50.0%
ATCGGCCATGACCACGATTA+CGG + Chr7:87003545-87003564 None:intergenic 50.0%
ATGCTCCATCACCAGTATCC+CGG - Chr7:87003463-87003482 MsG0780041135.01.T01:intron 50.0%
ATGTTCCCTCCCCTCATCAT+AGG - Chr7:87002951-87002970 MsG0780041135.01.T01:intron 50.0%
CAACTCGCAAACACACCCTA+AGG + Chr7:86998435-86998454 None:intergenic 50.0%
CACTCCTTTCTGCGTTTCCA+GGG - Chr7:86999935-86999954 MsG0780041135.01.T01:intron 50.0%
CATCTGTAGGCTTAGAGCAC+TGG - Chr7:87003782-87003801 MsG0780041135.01.T01:five_prime_UTR 50.0%
CCCCTGGTGACTCTGAATTT+CGG + Chr7:86999238-86999257 None:intergenic 50.0%
CCCGAAATTCAGAGTCACCA+GGG - Chr7:86999234-86999253 MsG0780041135.01.T01:CDS 50.0%
CCCTCATCATAGGCTGAAAG+AGG - Chr7:87002961-87002980 MsG0780041135.01.T01:intron 50.0%
CCCTGGTGACTCTGAATTTC+GGG + Chr7:86999237-86999256 None:intergenic 50.0%
CCGAAATTCAGAGTCACCAG+GGG - Chr7:86999235-86999254 MsG0780041135.01.T01:CDS 50.0%
CGAAATTCAGAGTCACCAGG+GGG - Chr7:86999236-86999255 MsG0780041135.01.T01:CDS 50.0%
CGATTACGGCTAGAACTCTG+TGG + Chr7:87000284-87000303 None:intergenic 50.0%
CTGTACTAAGCACCAGGTCA+CGG + Chr7:87002180-87002199 None:intergenic 50.0%
CTGTGTATGTCGGTAGAGAG+AGG + Chr7:87001612-87001631 None:intergenic 50.0%
CTTAGGGTGTGTTTGCGAGT+TGG - Chr7:86998433-86998452 MsG0780041135.01.T01:intron 50.0%
CTTGCTCTCTCGCTGATAAG+AGG - Chr7:87003178-87003197 MsG0780041135.01.T01:intron 50.0%
GAGGAAGCCATAAACCGCAA+GGG + Chr7:87001019-87001038 None:intergenic 50.0%
GCGCCAACGATTACGAGTTT+AGG - Chr7:86997711-86997730 MsG0780041135.01.T01:three_prime_UTR 50.0%
GGTATGGTTGGAGGTGGATA+TGG - Chr7:87002615-87002634 MsG0780041135.01.T01:intron 50.0%
GGTGAGCAGGTAGATCTTGA+TGG - Chr7:86999290-86999309 MsG0780041135.01.T01:CDS 50.0%
GGTTATGGTATGGTTGGAGG+TGG - Chr7:87002609-87002628 MsG0780041135.01.T01:intron 50.0%
GGTTCAGAGGTCTACATTGG+GGG - Chr7:86999491-86999510 MsG0780041135.01.T01:intron 50.0%
GTTCCACCGAAATGACTCCA+GGG + Chr7:87000069-87000088 None:intergenic 50.0%
GTTCCATGAGGTATGGACCA+AGG + Chr7:86999038-86999057 None:intergenic 50.0%
TACCTGCTCACCAGAATCTG+TGG + Chr7:86999282-86999301 None:intergenic 50.0%
TAGACCTCTGAACCATGAGG+TGG + Chr7:86999485-86999504 None:intergenic 50.0%
TCACTCCTTTCTGCGTTTCC+AGG - Chr7:86999934-86999953 MsG0780041135.01.T01:intron 50.0%
TCTTCCCTGGAAACGCAGAA+AGG + Chr7:86999942-86999961 None:intergenic 50.0%
TTCAGCCTATGATGAGGGGA+GGG + Chr7:87002959-87002978 None:intergenic 50.0%
TTTCAGCCTATGATGAGGGG+AGG + Chr7:87002960-87002979 None:intergenic 50.0%
! AAATGCTGAGTTGAGAGGGG+GGG - Chr7:87001223-87001242 MsG0780041135.01.T01:CDS 50.0%
! AGTAGTGGTGTCAGCTCAAG+TGG - Chr7:87003495-87003514 MsG0780041135.01.T01:intron 50.0%
! CAGAGTTCTAGCCGTAATCG+GGG - Chr7:87000284-87000303 MsG0780041135.01.T01:intron 50.0%
! CAGTGCTCTAAGCCTACAGA+TGG + Chr7:87003784-87003803 None:intergenic 50.0%
! CGCGTGCTTTGTTCTTAAGG+TGG + Chr7:86997694-86997713 None:intergenic 50.0%
! CTTGTCCAGCTTTAGCAGGA+GGG + Chr7:87002301-87002320 None:intergenic 50.0%
! GGGTTTTACGTTGGGCCTTA+TGG + Chr7:86997635-86997654 None:intergenic 50.0%
! TCTTGTCCAGCTTTAGCAGG+AGG + Chr7:87002302-87002321 None:intergenic 50.0%
! TGGCGCGTGCTTTGTTCTTA+AGG + Chr7:86997697-86997716 None:intergenic 50.0%
! TTACGTTGGGCCTTATGGGT+CGG + Chr7:86997630-86997649 None:intergenic 50.0%
! TTGGAGGGGACGACTTTTGA+GGG - Chr7:86998459-86998478 MsG0780041135.01.T01:intron 50.0%
! TTTGGAGGGGACGACTTTTG+AGG - Chr7:86998458-86998477 MsG0780041135.01.T01:intron 50.0%
!! GATTGGAGGTGTCCTCTTAC+TGG - Chr7:87001901-87001920 MsG0780041135.01.T01:intron 50.0%
AATGACTCCAGGGCCAACCT+TGG + Chr7:87000059-87000078 None:intergenic 55.0%
ACCACTACTCCTACCATGCC+GGG + Chr7:87003484-87003503 None:intergenic 55.0%
ACCCACAGATTCTGGTGAGC+AGG - Chr7:86999277-86999296 MsG0780041135.01.T01:CDS 55.0%
ATCTGTGGGAGAAGTGGCAG+AGG - Chr7:86999559-86999578 MsG0780041135.01.T01:intron 55.0%
CACAGAGGAAGAGAGGGGAA+AGG + Chr7:86998822-86998841 None:intergenic 55.0%
CACCACTACTCCTACCATGC+CGG + Chr7:87003485-87003504 None:intergenic 55.0%
CAGCCACTGATGTATGGTCC+GGG - Chr7:87003213-87003232 MsG0780041135.01.T01:intron 55.0%
CGTGACCTGGTGCTTAGTAC+AGG - Chr7:87002178-87002197 MsG0780041135.01.T01:CDS 55.0%
CTTCTTGCGCTTCCACCTCA+TGG - Chr7:86999470-86999489 MsG0780041135.01.T01:intron 55.0%
GCAGCCACTGATGTATGGTC+CGG - Chr7:87003212-87003231 MsG0780041135.01.T01:intron 55.0%
GCCCGAAATTCAGAGTCACC+AGG - Chr7:86999233-86999252 MsG0780041135.01.T01:CDS 55.0%
GCTTCCACCTCATGGTTCAG+AGG - Chr7:86999478-86999497 MsG0780041135.01.T01:intron 55.0%
GGAGGAAGCCATAAACCGCA+AGG + Chr7:87001020-87001039 None:intergenic 55.0%
GGCATCATTGTCATGCCAGC+AGG + Chr7:87003246-87003265 None:intergenic 55.0%
GGCCCAACGTAAAACCCATC+TGG - Chr7:86997638-86997657 MsG0780041135.01.T01:three_prime_UTR 55.0%
GGTGGAGGAAGAAGTGGAAG+AGG - Chr7:86999367-86999386 MsG0780041135.01.T01:intron 55.0%
TCAGGTTCACTGTTTCCCCC+TGG + Chr7:86999254-86999273 None:intergenic 55.0%
TCGGCGGTGTATGTCCAGAT+GGG + Chr7:86997655-86997674 None:intergenic 55.0%
TGTGACTGTAGGCAACAGCC+AGG - Chr7:87003429-87003448 MsG0780041135.01.T01:intron 55.0%
! AATGCTGAGTTGAGAGGGGG+GGG - Chr7:87001224-87001243 MsG0780041135.01.T01:CDS 55.0%
! CTTTGGGGGAGGTAACCAGT+AGG + Chr7:87003592-87003611 None:intergenic 55.0%
! GGTTGGCCCTGGAGTCATTT+CGG - Chr7:87000060-87000079 MsG0780041135.01.T01:intron 55.0%
! TACGTTGGGCCTTATGGGTC+GGG + Chr7:86997629-86997648 None:intergenic 55.0%
!! AGAGCACTGGCGATGACTCA+CGG - Chr7:87003795-87003814 MsG0780041135.01.T01:five_prime_UTR 55.0%
!! GGAGGTGGATATGGTGCTGT+TGG - Chr7:87002624-87002643 MsG0780041135.01.T01:intron 55.0%
!! GGATATGGTGCTGTTGGTGC+AGG - Chr7:87002630-87002649 MsG0780041135.01.T01:intron 55.0%
!! GGTGCTGTTGGTGCAGGATA+TGG - Chr7:87002636-87002655 MsG0780041135.01.T01:intron 55.0%
ATGCCAGCAGGAGTTGCTCC+CGG + Chr7:87003234-87003253 None:intergenic 60.0%
CACCAGTATCCCGGCATGGT+AGG - Chr7:87003472-87003491 MsG0780041135.01.T01:intron 60.0%
CCAAGAGGAGGTGGATACGC+AGG + Chr7:87002591-87002610 None:intergenic 60.0%
CCATCACCAGTATCCCGGCA+TGG - Chr7:87003468-87003487 MsG0780041135.01.T01:intron 60.0%
CCATGCCGGGATACTGGTGA+TGG + Chr7:87003471-87003490 None:intergenic 60.0%
CCTGCGTATCCACCTCCTCT+TGG - Chr7:87002588-87002607 MsG0780041135.01.T01:intron 60.0%
CTCCTACCATGCCGGGATAC+TGG + Chr7:87003477-87003496 None:intergenic 60.0%
CTCGGCGGTGTATGTCCAGA+TGG + Chr7:86997656-86997675 None:intergenic 60.0%
GCTCCCGGACCATACATCAG+TGG + Chr7:87003219-87003238 None:intergenic 60.0%
GCTCTCCCTCCTGCTAAAGC+TGG - Chr7:87002293-87002312 MsG0780041135.01.T01:CDS 60.0%
TCCCGGCATGGTAGGAGTAG+TGG - Chr7:87003480-87003499 MsG0780041135.01.T01:intron 60.0%
TGGCCCTGGAGTCATTTCGG+TGG - Chr7:87000063-87000082 MsG0780041135.01.T01:intron 60.0%
! GTTGTTGCCAAGGTTGGCCC+TGG - Chr7:87000049-87000068 MsG0780041135.01.T01:intron 60.0%
!! GGTGCAGGATATGGTGCTGC+TGG - Chr7:87002645-87002664 MsG0780041135.01.T01:intron 60.0%
!! TGGTGCTGCTGGCTTTGCAC+CGG - Chr7:87002656-87002675 MsG0780041135.01.T01:intron 60.0%
AAAGGCCCGCCCGACCCATA+AGG - Chr7:86997617-86997636 MsG0780041135.01.T01:three_prime_UTR 65.0%
TAGTGAGCTGGGCTGACCCG+AGG - Chr7:87000402-87000421 MsG0780041135.01.T01:intron 65.0%
! CTGAGTTGAGAGGGGGGGGT+CGG - Chr7:87001228-87001247 MsG0780041135.01.T01:CDS 65.0%
! GTTGGGCCTTATGGGTCGGG+CGG + Chr7:86997626-86997645 None:intergenic 65.0%
! TTGGGCCTTATGGGTCGGGC+GGG + Chr7:86997625-86997644 None:intergenic 65.0%
GGTCCGGGAGCAACTCCTGC+TGG - Chr7:87003228-87003247 MsG0780041135.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 86997550 87003979 86997550 ID=MsG0780041135.01;Name=MsG0780041135.01
Chr7 mRNA 86997550 87003979 86997550 ID=MsG0780041135.01.T01;Parent=MsG0780041135.01;Name=MsG0780041135.01.T01;_AED=0.34;_eAED=0.34;_QI=395|1|1|1|0.87|0.77|9|401|469
Chr7 exon 86997550 86998089 86997550 ID=MsG0780041135.01.T01:exon:52172;Parent=MsG0780041135.01.T01
Chr7 exon 86998228 86998313 86998228 ID=MsG0780041135.01.T01:exon:52171;Parent=MsG0780041135.01.T01
Chr7 exon 86998852 86999027 86998852 ID=MsG0780041135.01.T01:exon:52170;Parent=MsG0780041135.01.T01
Chr7 exon 86999122 86999329 86999122 ID=MsG0780041135.01.T01:exon:52169;Parent=MsG0780041135.01.T01
Chr7 exon 87001078 87001251 87001078 ID=MsG0780041135.01.T01:exon:52168;Parent=MsG0780041135.01.T01
Chr7 exon 87001433 87001573 87001433 ID=MsG0780041135.01.T01:exon:52167;Parent=MsG0780041135.01.T01
Chr7 exon 87001767 87001874 87001767 ID=MsG0780041135.01.T01:exon:52166;Parent=MsG0780041135.01.T01
Chr7 exon 87001949 87002469 87001949 ID=MsG0780041135.01.T01:exon:52165;Parent=MsG0780041135.01.T01
Chr7 exon 87003728 87003979 87003728 ID=MsG0780041135.01.T01:exon:52164;Parent=MsG0780041135.01.T01
Chr7 five_prime_UTR 87003728 87003979 87003728 ID=MsG0780041135.01.T01:five_prime_utr;Parent=MsG0780041135.01.T01
Chr7 five_prime_UTR 87002327 87002469 87002327 ID=MsG0780041135.01.T01:five_prime_utr;Parent=MsG0780041135.01.T01
Chr7 CDS 87001949 87002326 87001949 ID=MsG0780041135.01.T01:cds;Parent=MsG0780041135.01.T01
Chr7 CDS 87001767 87001874 87001767 ID=MsG0780041135.01.T01:cds;Parent=MsG0780041135.01.T01
Chr7 CDS 87001433 87001573 87001433 ID=MsG0780041135.01.T01:cds;Parent=MsG0780041135.01.T01
Chr7 CDS 87001078 87001251 87001078 ID=MsG0780041135.01.T01:cds;Parent=MsG0780041135.01.T01
Chr7 CDS 86999122 86999329 86999122 ID=MsG0780041135.01.T01:cds;Parent=MsG0780041135.01.T01
Chr7 CDS 86998852 86999027 86998852 ID=MsG0780041135.01.T01:cds;Parent=MsG0780041135.01.T01
Chr7 CDS 86998228 86998313 86998228 ID=MsG0780041135.01.T01:cds;Parent=MsG0780041135.01.T01
Chr7 CDS 86997951 86998089 86997951 ID=MsG0780041135.01.T01:cds;Parent=MsG0780041135.01.T01
Chr7 three_prime_UTR 86997550 86997950 86997550 ID=MsG0780041135.01.T01:three_prime_utr;Parent=MsG0780041135.01.T01
Gene Sequence

>MsG0780041135.01.T01

ATGCCTGGGACAAGACAAAAAGATGCAACTGCCCGAAATTCAGAGTCACCAGGGGGAAACAGTGAACCTGAAAAACCCACAGATTCTGGTGAGCAGGTAGATCTTGATGGGGACAATGATCAAGAGGAATCAAGCGAGGAAGAAGTTGAGTATGAAGAAGTAGAGGTGGAGGAAGAAGTGGAAGAGGAAGAAGAAGAGGAAGAAGTAGAGGAAGAGAGTAAGCCCTTAGATGAAGAAGATGAGGCTGACAAAAAGAAACACGCTGAGCTTCTTGCGCTTCCACCTCATGGTTCAGAGGTCTACATTGGGGGAATTCCTCACGAAACTTCTGAAAAAGATTTAAGGGTCTTTTGTCAATCTGTGGGAGAAGTGGCAGAGGTAAGGGTTATGAAGGGGAAAGAAGCCAAAGGTTATGCTTTTGTGACCTTCAAGACAAAGGAATTAGCATCTAAGGCTCTCGAGGAGTTGAACAACTCTGAATTCAAGGGAAGAAAAATAAAGTGCTCACCATCTCAAGTTAAGCATCGGTTATTCATTGGTAATGTTCCTAAAGAGTGGACTGTAGAAGATATGAAGAAGGTTGTTGCCAAGGTTGGCCCTGGAGTCATTTCGGTGGAACTGTTGAAGGATCCACAGAGTTCTAGCCGTAATCGGGGATTTGCTTTTATTGAGTATCACAATCATGCTTGTGCAGAATATTCAAGGCAGAAGATGTCAAACTCAAACTTTAAACTTGACAATAACGATGCAATAGTGAGCTGGGCTGACCCGAGGAATTCTGAATCATCATCATCCTCTCAGGTGAAAGCAGTATATGTAAAGAACCTTCCAGAAAACATAACTCAGAATCGTCTTAAAGAGCTGTTTGAACATCATGGAAAGATCACAAAAGTGGCTCTCCCTCCTGCTAAAGCTGGACAAGAAAAGAGCAGATATGGTTTTGTTCACTTTGCTGATAGGTCAAGTGCAATGAAGGCATTGAAGAATACGGAGAAGTATGAAATTGATGGTCAAACTTTGGAATGCTCACTTGCTAAGCCACAAGCAGATCAGAAGTCATCTGGTGCATCAAATTCATTCAACTCTGCTGTACTTCCTGCGTATCCACCTCCTCTTGGTTATGGTATGGTTGGAGGTGGATATGGTGCTGTTGGTGCAGGATATGGTGCTGCTGGCTTTGCACCGCCACTGATGTATGGTCCGGGAGCAACTCCTGCTGGCATGACAATGATGCCAATGCTTTTACCAGATGGAAGGATTGCATATGTATTGCAACAGCCAGGTTTTCAACAACATGCTCCATCACCAGTATCCCGGCATGGTAGGAGTAGTGGTGTCAGCTCAAGTGGTGAAAAACGCAGTAACGATAATAACCGTAATCGTGGTCATGGCCGATATAATCCTTACTAA
Protein sequence

>MsG0780041135.01.T01

MPGTRQKDATARNSESPGGNSEPEKPTDSGEQVDLDGDNDQEESSEEEVEYEEVEVEEEVEEEEEEEEVEEESKPLDEEDEADKKKHAELLALPPHGSEVYIGGIPHETSEKDLRVFCQSVGEVAEVRVMKGKEAKGYAFVTFKTKELASKALEELNNSEFKGRKIKCSPSQVKHRLFIGNVPKEWTVEDMKKVVAKVGPGVISVELLKDPQSSSRNRGFAFIEYHNHACAEYSRQKMSNSNFKLDNNDAIVSWADPRNSESSSSSQVKAVYVKNLPENITQNRLKELFEHHGKITKVALPPAKAGQEKSRYGFVHFADRSSAMKALKNTEKYEIDGQTLECSLAKPQADQKSSGASNSFNSAVLPAYPPPLGYGMVGGGYGAVGAGYGAAGFAPPLMYGPGATPAGMTMMPMLLPDGRIAYVLQQPGFQQHAPSPVSRHGRSSGVSSSGEKRSNDNNRNRGHGRYNPY*