AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041409.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041409.01.T01 MTR_7g110420 79.727 587 71 5 1 539 1 587 0.0 900
MsG0780041409.01.T01 MTR_7g110440 78.547 578 82 4 1 539 1 575 0.0 899
MsG0780041409.01.T01 MTR_7g110490 75.260 578 101 4 1 539 1 575 0.0 859
MsG0780041409.01.T01 MTR_7g110510 75.260 578 101 4 1 539 1 575 0.0 859
MsG0780041409.01.T01 MTR_7g110430 76.298 578 61 4 1 539 1 541 0.0 832
MsG0780041409.01.T01 MTR_1g086210 54.561 581 213 10 1 540 1 571 0.0 587
MsG0780041409.01.T01 MTR_1g086190 47.350 585 243 13 1 540 1 565 1.22e-167 487
MsG0780041409.01.T01 MTR_7g110560 40.273 586 269 15 1 540 1 551 5.03e-133 398
MsG0780041409.01.T01 MTR_4g124550 36.102 590 304 15 1 536 21 591 3.79e-110 340
MsG0780041409.01.T01 MTR_8g088610 49.014 355 152 8 197 539 40 377 4.36e-107 325
MsG0780041409.01.T01 MTR_5g083620 46.961 362 166 8 190 539 10 357 1.62e-102 313
MsG0780041409.01.T01 MTR_1g083470 34.495 574 305 18 10 535 17 567 2.67e-97 307
MsG0780041409.01.T01 MTR_1g083500 34.495 574 305 18 10 535 17 567 2.67e-97 307
MsG0780041409.01.T01 MTR_2g436040 35.000 560 304 17 6 537 18 545 3.79e-95 302
MsG0780041409.01.T01 MTR_4g120280 34.315 577 313 14 2 534 14 568 8.01e-94 298
MsG0780041409.01.T01 MTR_4g005170 32.479 585 319 17 4 535 11 572 1.06e-93 299
MsG0780041409.01.T01 MTR_1g083490 32.308 585 320 17 4 535 11 572 2.73e-93 296
MsG0780041409.01.T01 MTR_4g120290 33.333 579 320 14 2 536 14 570 3.71e-92 293
MsG0780041409.01.T01 MTR_7g050870 35.529 501 279 11 45 517 54 538 1.14e-91 291
MsG0780041409.01.T01 MTR_4g005180 31.889 577 317 17 12 535 1 554 4.18e-91 290
MsG0780041409.01.T01 MTR_7g112590 32.419 583 327 17 4 534 12 579 1.57e-89 287
MsG0780041409.01.T01 MTR_4g025690 37.783 442 234 9 106 533 94 508 7.42e-88 280
MsG0780041409.01.T01 MTR_8g023310 32.939 592 323 13 2 538 17 589 9.13e-88 282
MsG0780041409.01.T01 MTR_8g042900 34.130 586 300 16 2 530 25 581 7.94e-87 280
MsG0780041409.01.T01 MTR_1g083510 31.419 592 322 16 4 534 11 579 5.31e-86 278
MsG0780041409.01.T01 MTR_7g050950 35.446 505 273 15 45 517 54 537 5.48e-86 276
MsG0780041409.01.T01 MTR_8g023150 36.902 523 285 12 37 532 72 576 3.28e-85 275
MsG0780041409.01.T01 MTR_3g010780 34.572 538 269 15 42 530 71 574 3.54e-85 275
MsG0780041409.01.T01 MTR_7g108905 32.517 572 332 14 1 536 1 554 1.82e-84 273
MsG0780041409.01.T01 MTR_2g044880 37.931 435 230 12 108 518 92 510 4.23e-83 268
MsG0780041409.01.T01 MTR_4g087980 35.260 519 267 17 54 532 29 518 6.33e-83 268
MsG0780041409.01.T01 MTR_7g050980 33.865 502 288 10 44 517 54 539 6.69e-83 268
MsG0780041409.01.T01 MTR_4g025730 37.162 444 231 13 106 533 93 504 5.56e-82 265
MsG0780041409.01.T01 MTR_3g091380 32.162 569 324 16 5 527 34 586 7.92e-82 267
MsG0780041409.01.T01 MTR_8g104645 41.457 357 181 7 188 533 28 367 1.49e-81 259
MsG0780041409.01.T01 MTR_8g104655 35.197 483 270 10 78 533 70 536 3.07e-81 264
MsG0780041409.01.T01 MTR_1g008140 32.526 578 321 20 2 527 36 596 3.09e-81 266
MsG0780041409.01.T01 MTR_4g087970 36.526 449 238 11 108 533 83 507 1.13e-80 261
MsG0780041409.01.T01 MTR_2g436050 32.212 565 322 12 10 536 21 562 6.44e-80 261
MsG0780041409.01.T01 MTR_2g044660 43.931 346 164 9 203 538 307 632 9.03e-79 259
MsG0780041409.01.T01 MTR_7g053360 35.240 437 253 8 111 533 102 522 1.17e-78 256
MsG0780041409.01.T01 MTR_3g008700 37.871 404 224 9 144 533 132 522 1.98e-78 256
MsG0780041409.01.T01 MTR_3g033690 37.129 404 227 8 144 533 131 521 3.56e-78 255
MsG0780041409.01.T01 MTR_3g008640 38.119 404 223 9 144 533 132 522 4.46e-78 255
MsG0780041409.01.T01 MTR_3g008720 37.129 404 227 8 144 533 132 522 1.06e-76 251
MsG0780041409.01.T01 MTR_2g044810 31.860 543 329 14 12 534 9 530 3.72e-76 250
MsG0780041409.01.T01 MTR_7g112580 33.142 522 292 15 32 519 30 528 1.16e-73 244
MsG0780041409.01.T01 MTR_4g025670 41.349 341 178 7 192 518 142 474 1.55e-73 242
MsG0780041409.01.T01 MTR_7g108900 32.397 534 303 15 45 534 37 556 4.42e-72 240
MsG0780041409.01.T01 MTR_4g124520 40.248 323 171 5 205 516 193 504 8.35e-72 238
MsG0780041409.01.T01 MTR_1g083520 36.044 455 255 12 107 539 89 529 2.05e-70 235
MsG0780041409.01.T01 MTR_1g054880 41.562 320 161 8 230 534 246 554 1.27e-69 234
MsG0780041409.01.T01 MTR_4g035980 38.506 348 190 6 197 533 200 534 1.79e-69 233
MsG0780041409.01.T01 MTR_7g108890 40.694 317 168 7 230 530 250 562 3.07e-69 233
MsG0780041409.01.T01 MTR_1g088020 33.615 473 256 13 108 534 91 551 1.00e-67 228
MsG0780041409.01.T01 MTR_8g042910 33.056 481 253 13 108 534 143 608 2.71e-66 226
MsG0780041409.01.T01 MTR_1g088225 33.615 473 254 14 108 534 91 549 1.75e-65 223
MsG0780041409.01.T01 MTR_3g010770 30.545 550 304 16 46 534 39 571 6.91e-65 221
MsG0780041409.01.T01 MTR_8g104580 32.489 474 264 13 77 533 61 495 2.65e-64 218
MsG0780041409.01.T01 MTR_7g108875 40.308 325 172 7 207 516 230 547 1.82e-62 214
MsG0780041409.01.T01 MTR_8g093460 28.409 528 308 17 46 532 47 545 1.51e-57 201
MsG0780041409.01.T01 MTR_5g083590 36.482 307 146 7 229 534 6 264 1.87e-56 190
MsG0780041409.01.T01 MTR_0618s0020 43.860 228 120 3 306 533 4 223 1.94e-56 189
MsG0780041409.01.T01 MTR_0458s0030 41.132 265 137 6 280 534 55 310 4.83e-55 188
MsG0780041409.01.T01 MTR_1g088040 41.132 265 137 6 280 534 55 310 4.83e-55 188
MsG0780041409.01.T01 MTR_7g111560 32.035 565 318 22 5 538 27 556 7.85e-54 191
MsG0780041409.01.T01 MTR_2g044810 40.161 249 137 5 289 534 222 461 3.09e-52 185
MsG0780041409.01.T01 MTR_3g095920 37.333 300 148 10 228 495 238 529 5.38e-51 184
MsG0780041409.01.T01 MTR_7g107180 31.935 310 195 6 229 534 6 303 1.63e-46 165
MsG0780041409.01.T01 MTR_2g105560 29.231 325 216 5 213 535 24 336 2.55e-41 152
MsG0780041409.01.T01 MTR_6g042660 32.281 285 149 6 230 495 37 296 4.46e-39 145
MsG0780041409.01.T01 MTR_6g024165 33.119 311 165 9 230 518 41 330 1.25e-38 144
MsG0780041409.01.T01 MTR_6g088810 33.016 315 161 10 238 528 90 378 2.53e-38 145
MsG0780041409.01.T01 MTR_6g012800 28.963 328 191 8 230 534 6 314 2.22e-37 140
MsG0780041409.01.T01 MTR_8g102380 33.448 290 151 7 231 495 81 353 5.93e-36 138
MsG0780041409.01.T01 MTR_0458s0010 28.450 471 246 16 108 534 91 514 6.01e-35 138
MsG0780041409.01.T01 MTR_2g039530 30.841 321 177 11 196 498 24 317 7.14e-35 134
MsG0780041409.01.T01 MTR_2g436070 30.159 315 175 9 10 297 21 317 4.05e-34 133
MsG0780041409.01.T01 MTR_7g102600 28.920 287 177 5 225 495 94 369 4.65e-34 133
MsG0780041409.01.T01 MTR_7g011530 28.135 327 193 9 231 534 7 314 6.70e-34 131
MsG0780041409.01.T01 MTR_1g033050 29.930 284 174 6 225 495 13 284 6.84e-33 128
MsG0780041409.01.T01 MTR_7g092780 29.655 290 174 5 225 495 85 363 9.96e-33 129
MsG0780041409.01.T01 MTR_1g086540 29.677 310 180 8 206 495 29 320 7.21e-32 126
MsG0780041409.01.T01 MTR_6g042690 32.517 286 152 9 230 495 39 303 1.92e-31 124
MsG0780041409.01.T01 MTR_5g093970 29.123 285 163 7 230 496 43 306 6.92e-30 120
MsG0780041409.01.T01 MTR_5g095490 30.634 284 156 7 236 495 67 333 1.09e-29 120
MsG0780041409.01.T01 MTR_8g102380 32.197 264 139 6 231 469 81 329 1.10e-29 119
MsG0780041409.01.T01 MTR_5g012600 29.268 287 168 6 230 495 63 335 1.95e-29 119
MsG0780041409.01.T01 MTR_8g036225 29.210 291 183 7 230 510 33 310 8.19e-29 117
MsG0780041409.01.T01 MTR_4g124740 27.389 314 183 8 224 518 48 335 7.18e-27 112
MsG0780041409.01.T01 MTR_2g073390 28.205 312 189 9 230 527 71 361 2.01e-26 111
MsG0780041409.01.T01 MTR_4g074290 29.889 271 159 8 230 484 71 326 2.94e-26 110
MsG0780041409.01.T01 MTR_5g088300 30.909 275 164 6 230 496 37 293 5.05e-26 108
MsG0780041409.01.T01 MTR_0009s0350 27.848 316 181 9 232 527 73 361 1.19e-24 105
MsG0780041409.01.T01 MTR_0009s0340 27.848 316 181 9 232 527 73 361 1.19e-24 105
MsG0780041409.01.T01 MTR_2g033970 28.975 283 176 6 226 495 52 322 5.23e-24 103
MsG0780041409.01.T01 MTR_5g088290 28.413 271 177 5 230 496 48 305 6.33e-24 103
MsG0780041409.01.T01 MTR_4g051810 28.625 269 176 5 230 495 37 292 7.57e-24 102
MsG0780041409.01.T01 MTR_5g088280 26.909 275 185 5 225 496 34 295 1.80e-23 101
MsG0780041409.01.T01 MTR_6g025590 32.759 174 99 3 230 385 49 222 3.39e-20 90.5
MsG0780041409.01.T01 MTR_2g436600 32.759 174 98 6 226 385 51 219 6.57e-17 82.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041409.01.T01 AT2G47030 37.500 600 291 17 1 533 1 583 8.59e-120 365
MsG0780041409.01.T01 AT2G47040 36.953 617 288 21 1 538 1 595 3.53e-113 348
MsG0780041409.01.T01 AT3G62170 35.216 602 307 18 3 538 4 588 3.16e-105 328
MsG0780041409.01.T01 AT5G27870 34.904 573 307 14 5 538 17 562 1.44e-96 309
MsG0780041409.01.T01 AT4G33230 35.405 531 284 13 40 533 93 601 2.95e-95 302
MsG0780041409.01.T01 AT3G05610 34.326 571 316 15 2 534 12 561 9.65e-95 303
MsG0780041409.01.T01 AT3G10710 35.149 569 291 16 5 533 26 556 1.41e-94 299
MsG0780041409.01.T01 AT5G49180 32.709 587 322 13 2 539 9 571 5.05e-93 295
MsG0780041409.01.T01 AT2G26450 32.455 607 303 15 1 524 21 603 1.16e-92 296
MsG0780041409.01.T01 AT3G14310 34.601 552 288 14 42 538 59 592 1.69e-91 292
MsG0780041409.01.T01 AT1G53830 33.516 546 304 11 37 538 57 587 5.48e-86 278
MsG0780041409.01.T01 AT5G53370 33.972 574 317 16 2 535 31 582 2.27e-84 273
MsG0780041409.01.T01 AT5G53370 33.972 574 317 16 2 535 67 618 4.61e-84 273
MsG0780041409.01.T01 AT2G45220 34.661 502 277 16 39 519 27 498 6.68e-83 267
MsG0780041409.01.T01 AT1G11580 31.903 536 330 11 5 519 22 543 1.11e-82 268
MsG0780041409.01.T01 AT1G11580 31.903 536 330 11 5 519 43 564 1.52e-82 268
MsG0780041409.01.T01 AT3G06830 31.826 553 310 15 27 534 34 564 2.32e-82 268
MsG0780041409.01.T01 AT3G14300 34.357 521 280 13 37 517 454 952 6.65e-82 275
MsG0780041409.01.T01 AT5G04960 33.391 575 293 17 10 538 34 564 1.94e-80 262
MsG0780041409.01.T01 AT3G49220 32.686 566 325 17 6 532 50 598 4.21e-78 257
MsG0780041409.01.T01 AT1G53840 32.790 552 295 16 33 537 64 586 6.33e-78 256
MsG0780041409.01.T01 AT3G49220 32.686 566 325 17 6 532 95 643 1.23e-77 257
MsG0780041409.01.T01 AT5G51500 34.025 482 271 10 78 533 75 535 6.22e-77 253
MsG0780041409.01.T01 AT3G59010 35.043 468 253 12 76 516 68 511 8.31e-77 252
MsG0780041409.01.T01 AT5G51490 34.375 480 272 10 78 533 71 531 8.98e-77 252
MsG0780041409.01.T01 AT4G02300 34.199 462 255 12 106 538 91 532 5.26e-76 250
MsG0780041409.01.T01 AT3G43270 36.117 479 265 11 70 518 43 510 1.03e-75 249
MsG0780041409.01.T01 AT3G47400 33.333 531 295 15 31 533 90 589 3.24e-75 249
MsG0780041409.01.T01 AT5G20860 36.215 428 236 10 110 516 110 521 3.96e-75 248
MsG0780041409.01.T01 AT2G43050 37.011 435 217 13 109 516 95 499 7.84e-75 246
MsG0780041409.01.T01 AT3G27980 37.677 353 193 7 192 534 158 493 1.31e-74 245
MsG0780041409.01.T01 AT1G11590 38.202 356 191 8 192 534 181 520 2.14e-73 243
MsG0780041409.01.T01 AT4G03930 37.669 369 197 9 179 534 172 520 1.79e-72 240
MsG0780041409.01.T01 AT1G23200 40.058 342 170 8 188 516 218 537 2.78e-72 241
MsG0780041409.01.T01 AT2G26440 34.348 460 257 12 104 534 100 543 3.24e-72 240
MsG0780041409.01.T01 AT4G33220 33.554 453 247 9 108 518 68 508 5.81e-72 239
MsG0780041409.01.T01 AT4G02320 36.103 349 200 6 198 536 181 516 9.13e-72 238
MsG0780041409.01.T01 AT1G02810 40.252 318 168 5 230 534 265 573 8.29e-71 237
MsG0780041409.01.T01 AT4G02330 42.000 300 157 5 230 516 259 554 2.91e-70 236
MsG0780041409.01.T01 AT4G33220 37.500 344 194 5 185 518 55 387 1.91e-69 229
MsG0780041409.01.T01 AT4G00190 31.418 522 276 15 45 538 7 474 4.04e-69 230
MsG0780041409.01.T01 AT4G15980 36.096 374 211 7 172 534 342 698 1.91e-67 231
MsG0780041409.01.T01 AT3G05620 33.008 512 274 18 46 516 41 524 1.91e-67 228
MsG0780041409.01.T01 AT4G15980 36.096 374 211 7 172 534 352 708 2.13e-67 231
MsG0780041409.01.T01 AT2G47550 34.152 448 251 11 108 516 99 541 2.14e-66 225
MsG0780041409.01.T01 AT3G60730 40.777 309 163 6 225 518 201 504 5.78e-64 218
MsG0780041409.01.T01 AT3G10720 30.275 545 310 17 46 535 83 612 3.05e-62 215
MsG0780041409.01.T01 AT5G20860 33.656 413 229 8 110 511 110 488 1.57e-60 208
MsG0780041409.01.T01 AT5G04970 30.459 545 313 18 44 535 86 617 1.43e-58 206
MsG0780041409.01.T01 AT1G11370 39.431 246 138 2 227 462 43 287 1.05e-53 184
MsG0780041409.01.T01 AT5G09760 28.983 521 304 15 42 518 45 543 2.66e-53 190
MsG0780041409.01.T01 AT5G09760 28.983 521 304 15 42 518 71 569 4.35e-53 189
MsG0780041409.01.T01 AT5G64640 28.707 526 302 16 42 518 93 594 4.56e-51 184
MsG0780041409.01.T01 AT3G10720 39.623 265 141 5 281 535 1 256 1.38e-50 174
MsG0780041409.01.T01 AT3G29090 30.503 318 182 7 230 527 7 305 2.61e-37 140
MsG0780041409.01.T01 AT2G19150 31.786 280 167 5 229 495 40 308 7.84e-37 140
MsG0780041409.01.T01 AT1G05310 29.655 290 174 5 225 495 86 364 5.44e-36 139
MsG0780041409.01.T01 AT2G36700 28.875 329 194 8 214 527 30 333 2.50e-34 132
MsG0780041409.01.T01 AT5G19730 30.841 321 174 9 230 527 86 381 6.05e-34 132
MsG0780041409.01.T01 AT2G21610 29.153 295 182 7 230 516 51 326 8.63e-33 129
MsG0780041409.01.T01 AT2G21610 29.153 295 182 7 230 516 56 331 1.01e-32 129
MsG0780041409.01.T01 AT2G47280 29.537 281 173 7 229 495 34 303 2.02e-32 127
MsG0780041409.01.T01 AT2G19150 31.102 254 153 4 229 469 40 284 5.96e-31 122
MsG0780041409.01.T01 AT3G24130 30.142 282 170 5 230 495 34 304 2.95e-30 121
MsG0780041409.01.T01 AT2G36710 28.659 328 197 9 223 532 82 390 5.12e-30 122
MsG0780041409.01.T01 AT5G47500 28.387 310 187 6 207 495 38 333 2.51e-29 119
MsG0780041409.01.T01 AT5G55590 29.167 312 181 6 227 516 79 372 7.66e-29 118
MsG0780041409.01.T01 AT5G18990 29.433 282 172 6 230 495 29 299 3.04e-28 115
MsG0780041409.01.T01 AT1G44980 32.512 203 124 4 192 384 43 242 3.60e-28 113
MsG0780041409.01.T01 AT5G55590 29.213 267 152 5 227 469 79 332 8.98e-28 114
MsG0780041409.01.T01 AT5G07420 26.648 364 218 11 193 535 26 361 4.43e-25 107
MsG0780041409.01.T01 AT3G17060 27.018 285 179 7 226 495 42 312 1.86e-24 105
MsG0780041409.01.T01 AT5G26810 27.778 288 173 7 230 495 34 308 1.05e-23 102
MsG0780041409.01.T01 AT5G61680 25.298 336 206 10 207 527 53 358 1.37e-23 102
MsG0780041409.01.T01 AT1G69940 23.836 365 229 12 186 527 17 355 1.60e-23 102
MsG0780041409.01.T01 AT5G07430 26.912 353 211 12 203 535 36 361 3.21e-23 101
MsG0780041409.01.T01 AT5G07410 23.481 362 234 10 186 527 17 355 4.30e-23 101
MsG0780041409.01.T01 AT3G49220 25.868 317 197 11 6 297 95 398 1.69e-15 79.3

Find 147 sgRNAs with CRISPR-Local

Find 174 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACCTAATTGTGAATCTTTC+AGG 0.117543 7:+90596310 None:intergenic
GAGTTTCATGGCAGAGTTTC+TGG 0.122968 7:+90597836 None:intergenic
TCAGGGAACAATGCTGCTTC+TGG 0.198110 7:+90596328 None:intergenic
GTTTCTCTTATTCTCGTTAT+AGG 0.206820 7:-90597961 MsG0780041409.01.T01:CDS
GATCCTTTCACTCATGTTAA+AGG 0.233311 7:+90597726 None:intergenic
GGTACCATTGACTTCATCTT+TGG 0.253035 7:-90596493 MsG0780041409.01.T01:CDS
GGTCAAGTGGAAGGGTTATA+AGG 0.282152 7:-90596110 MsG0780041409.01.T01:CDS
TGCTTCTGATCGCAAGCTTT+TGG 0.309615 7:-90597281 MsG0780041409.01.T01:CDS
GAAAGGATCGCCACTGAGTA+TGG 0.323327 7:-90597712 MsG0780041409.01.T01:CDS
GTTTCTGGTCTTGTGCGTTT+TGG 0.333543 7:+90597851 None:intergenic
CATGCAGCCAACACCGCAAC+GGG 0.333583 7:-90596691 MsG0780041409.01.T01:intron
AACATGTCTCTTCATTTGTT+TGG 0.343058 7:+90596182 None:intergenic
CAAACTTCAAGTTGAATTGC+TGG 0.344366 7:+90597380 None:intergenic
GCAGCTGCTATGTATGCCTT+AGG 0.356508 7:+90597781 None:intergenic
CTTTGTTGAGTTTGAACCTC+AGG 0.364458 7:+90597892 None:intergenic
GGACTTGATGCAATTTGCTT+TGG 0.368183 7:-90597650 MsG0780041409.01.T01:CDS
ACTGAGTATGGAAAGGAAAA+TGG 0.368215 7:-90597700 MsG0780041409.01.T01:CDS
TCCCTGAAAGATTCACAATT+AGG 0.375910 7:-90596312 MsG0780041409.01.T01:CDS
AGCCACTGACAATGTCATTA+AGG 0.387743 7:-90597749 MsG0780041409.01.T01:CDS
CAGGGAACAATGCTGCTTCT+GGG 0.393500 7:+90596329 None:intergenic
ATGATCAAGGACACCCTTCA+TGG 0.398368 7:-90597309 MsG0780041409.01.T01:CDS
CAACCATTCAGCTGCAGACT+TGG 0.398477 7:+90596027 None:intergenic
ATTCACAATTAGGTCTTACT+TGG 0.400367 7:-90596302 MsG0780041409.01.T01:CDS
ACGATCATCGTGAGAAAGTC+TGG 0.407507 7:-90596442 MsG0780041409.01.T01:CDS
ATCTGCCTTTGTTTCCCTTA+GGG 0.410931 7:+90597152 None:intergenic
CCGATATTGAATATGAATAC+TGG 0.411998 7:-90596379 MsG0780041409.01.T01:CDS
AAGAATGTTAACAGCATCCT+TGG 0.413748 7:+90597081 None:intergenic
GCCTTTGATTCATTCTTCCA+TGG 0.415722 7:+90596274 None:intergenic
AGGAGATATGTCTGCTTTGG+TGG 0.416877 7:-90596593 MsG0780041409.01.T01:CDS
GTTATAAGGGTGTCATTAGC+AGG 0.418426 7:-90596096 MsG0780041409.01.T01:CDS
AACACCGCAACGGGGTTCAT+TGG 0.419717 7:-90596682 MsG0780041409.01.T01:CDS
ATTGTCAGTGGCTGCCTTCA+CGG 0.420286 7:+90597759 None:intergenic
CTGGGATGATATTGCAGTCC+TGG 0.420361 7:+90596347 None:intergenic
TCACGATGATCGTAGATTGT+TGG 0.425782 7:+90596452 None:intergenic
AGCTTGCTCACCGGCAGGAC+CGG 0.434678 7:+90596633 None:intergenic
TATCTGCCTTTGTTTCCCTT+AGG 0.435687 7:+90597151 None:intergenic
CCAGTATTCATATTCAATAT+CGG 0.440515 7:+90596379 None:intergenic
AAATTGGCCGCTACCATCCT+TGG 0.445071 7:+90597204 None:intergenic
AAACCGCTGATATGAGGAAT+TGG 0.447163 7:-90597567 MsG0780041409.01.T01:CDS
GCACAGAACTAAGAGTTTCA+TGG 0.448753 7:+90597824 None:intergenic
GCTGTTAACATTCTTATGTA+TGG 0.451888 7:-90597073 MsG0780041409.01.T01:CDS
GCAGTCATCAAGAGCCATCT+TGG 0.452748 7:+90597675 None:intergenic
CGTAGGAGATATGTCTGCTT+TGG 0.453795 7:-90596596 MsG0780041409.01.T01:CDS
AATGAACCCCGTTGCGGTGT+TGG 0.456111 7:+90596684 None:intergenic
TTAAGAAGACGACGAGAAAG+AGG 0.456356 7:+90597349 None:intergenic
ACCTAATTGTGAATCTTTCA+GGG 0.456777 7:+90596311 None:intergenic
CGCCGATGTCGCTGACCCTA+AGG 0.458086 7:-90597797 MsG0780041409.01.T01:CDS
GCTTGTACGTTCAAAGCAAC+AGG 0.458208 7:-90596543 MsG0780041409.01.T01:CDS
GTCAAGTGGAAGGGTTATAA+GGG 0.458380 7:-90596109 MsG0780041409.01.T01:CDS
AGAATGTTAACAGCATCCTT+GGG 0.458467 7:+90597082 None:intergenic
AATTCCTCATATCAGCGGTT+TGG 0.460753 7:+90597569 None:intergenic
ATGAATAAAATCACCAATTG+TGG 0.460771 7:+90596237 None:intergenic
TTTGTTGAGTTTGAACCTCA+GGG 0.474099 7:+90597893 None:intergenic
GAGTTTGGACACCGTACAAA+AGG 0.477087 7:-90597449 MsG0780041409.01.T01:CDS
GAATACTGGTATTGTGATCC+AGG 0.478288 7:-90596365 MsG0780041409.01.T01:CDS
GTTGCCCTTGACATTGTGAC+TGG 0.483201 7:-90597418 MsG0780041409.01.T01:CDS
TACCGAAAATGTGTTATCTC+TGG 0.484598 7:-90596514 MsG0780041409.01.T01:CDS
AGCGGTGAATTTGTTAGCCT+CGG 0.485929 7:+90596072 None:intergenic
TGCTCTTGACTCTTACCCTA+AGG 0.495403 7:-90597167 MsG0780041409.01.T01:CDS
GTCGTCATGGAATCCACAAT+TGG 0.496556 7:-90596250 MsG0780041409.01.T01:CDS
GCCACAGCTTGCTCACCGGC+AGG 0.498293 7:+90596628 None:intergenic
ATGACCAAACCGCTGATATG+AGG 0.503008 7:-90597573 MsG0780041409.01.T01:CDS
TTGGCTAAAATGCAACGAAA+AGG 0.503480 7:-90597262 MsG0780041409.01.T01:CDS
GTTGTCACGAACACAGTTGT+TGG 0.504163 7:+90597612 None:intergenic
CTTGACCCTCCTCGCAACAC+TGG 0.508860 7:+90596126 None:intergenic
TTTGAACGTACAAGCTGTCT+TGG 0.509572 7:+90596551 None:intergenic
GACCCAAGTCTGCAGCTGAA+TGG 0.511381 7:-90596030 MsG0780041409.01.T01:CDS
CTGCAGACTTGGGTCCAGCT+TGG 0.511847 7:+90596038 None:intergenic
TGGTGCCAGTGTTGCGAGGA+GGG 0.522982 7:-90596131 MsG0780041409.01.T01:CDS
TCGTCGTCTTCTTAATTCTG+AGG 0.525593 7:-90597341 MsG0780041409.01.T01:CDS
TGCCTTAGGGTCAGCGACAT+CGG 0.526058 7:+90597795 None:intergenic
CCGCAACGGGGTTCATTGGA+AGG 0.526487 7:-90596678 MsG0780041409.01.T01:CDS
AAGGATGGAGAGAAAATACT+AGG 0.529990 7:-90597243 MsG0780041409.01.T01:CDS
GAGAACACAGCCGGTCCTGC+CGG 0.536625 7:-90596643 MsG0780041409.01.T01:CDS
GCTGGTATATTTCTCCAAGC+TGG 0.539392 7:-90596052 MsG0780041409.01.T01:CDS
AAAGGAAAATGGTGCCAAGA+TGG 0.539757 7:-90597689 MsG0780041409.01.T01:CDS
TGCGAGGAGGGTCAAGTGGA+AGG 0.539994 7:-90596119 MsG0780041409.01.T01:CDS
AATGTTGTTGTTGCCAAGGA+TGG 0.540667 7:-90597217 MsG0780041409.01.T01:CDS
AACATTCTTATGTATGGTGA+TGG 0.542196 7:-90597067 MsG0780041409.01.T01:CDS
AACCATTCAGCTGCAGACTT+GGG 0.543321 7:+90596028 None:intergenic
CTCGTTATAGGTGTTATCAT+CGG 0.546814 7:-90597949 MsG0780041409.01.T01:CDS
GATCGTAGATTGTTGGATCA+AGG 0.548196 7:+90596459 None:intergenic
CAGCTGCTATGTATGCCTTA+GGG 0.548543 7:+90597782 None:intergenic
GGTAAGAGTCAAGAGCAGCC+TGG 0.548622 7:+90597173 None:intergenic
TGTTCCAAAGATGAAGTCAA+TGG 0.554635 7:+90596489 None:intergenic
TGAATCAAAGGCAGTCGTCA+TGG 0.557838 7:-90596263 MsG0780041409.01.T01:CDS
AGGCCTTTAACATGAGTGAA+AGG 0.558434 7:-90597729 MsG0780041409.01.T01:CDS
TCCTTGGCAACAACAACATT+AGG 0.558760 7:+90597220 None:intergenic
GCCTAATGTTGTTGTTGCCA+AGG 0.559835 7:-90597221 MsG0780041409.01.T01:CDS
TTGGTGGGTTGTCATATCGT+GGG 0.561018 7:-90596577 MsG0780041409.01.T01:CDS
CGGCCAATTTAAAACCATCC+AGG 0.564365 7:-90597191 MsG0780041409.01.T01:CDS
TCCTGCCGGTGAGCAAGCTG+TGG 0.569735 7:-90596629 MsG0780041409.01.T01:CDS
TTTGCAGAGTATGCCAACAC+TGG 0.570562 7:-90596157 MsG0780041409.01.T01:CDS
ATACATAGCAGCTGCCGTGA+AGG 0.573192 7:-90597773 MsG0780041409.01.T01:CDS
AGAGTCAAGAGCAGCCTGGA+TGG 0.577815 7:+90597177 None:intergenic
CACGAACACAGTTGTTGGAA+AGG 0.578790 7:+90597617 None:intergenic
GTTCTTTCTACCGCTGACAA+TGG 0.579996 7:+90597033 None:intergenic
CTAAAATGCAACGAAAAGGA+TGG 0.581135 7:-90597258 MsG0780041409.01.T01:CDS
TTTGGTGGGTTGTCATATCG+TGG 0.581226 7:-90596578 MsG0780041409.01.T01:CDS
TCAGAAGCAGAGATCCATGA+AGG 0.585246 7:+90597295 None:intergenic
GGTCTTACTTGGGCAGACCA+TGG 0.585697 7:-90596291 MsG0780041409.01.T01:CDS
CGCAACGGGGTTCATTGGAA+GGG 0.585707 7:-90596677 MsG0780041409.01.T01:CDS
GTGTCTTTATACCGGCATGT+TGG 0.587691 7:+90597011 None:intergenic
GTTGAATTGCTGGAGGATGT+CGG 0.588045 7:+90597390 None:intergenic
TTCACAATTAGGTCTTACTT+GGG 0.588154 7:-90596301 MsG0780041409.01.T01:CDS
ACCATGGAAGAATGAATCAA+AGG 0.595069 7:-90596275 MsG0780041409.01.T01:CDS
ACAAACCAGTCACAATGTCA+AGG 0.595386 7:+90597413 None:intergenic
GGAGATATGTCTGCTTTGGT+GGG 0.596429 7:-90596592 MsG0780041409.01.T01:CDS
GCGAGGAGGGTCAAGTGGAA+GGG 0.598095 7:-90596118 MsG0780041409.01.T01:CDS
CACAATGTCAAGGGCAACAG+CGG 0.601131 7:+90597423 None:intergenic
GAGGCTAACAAATTCACCGC+TGG 0.601385 7:-90596070 MsG0780041409.01.T01:CDS
GATGGCTCTTGATGACTGCA+AGG 0.601614 7:-90597671 MsG0780041409.01.T01:CDS
TTGGTGCCAGTGTTGCGAGG+AGG 0.601905 7:-90596132 MsG0780041409.01.T01:CDS
GCATGCAGCCAACACCGCAA+CGG 0.602268 7:-90596692 MsG0780041409.01.T01:intron
CCTTCCAATGAACCCCGTTG+CGG 0.602590 7:+90596678 None:intergenic
AGAATACATCATTGTCCCCA+AGG 0.603623 7:-90597098 MsG0780041409.01.T01:CDS
GGGTGTCATTAGCAGGGCCG+AGG 0.608365 7:-90596089 MsG0780041409.01.T01:CDS
GTTGTTGCCAAGGATGGTAG+CGG 0.610721 7:-90597211 MsG0780041409.01.T01:CDS
GTGTTGCGAGGAGGGTCAAG+TGG 0.612503 7:-90596123 MsG0780041409.01.T01:CDS
ATGACATTTGAGAACACAGC+CGG 0.615960 7:-90596652 MsG0780041409.01.T01:CDS
GGTAGAAAGAACCAACATGC+CGG 0.619293 7:-90597022 MsG0780041409.01.T01:intron
AAATGCCACAGCTTGCTCAC+CGG 0.621601 7:+90596624 None:intergenic
GCTCTTGACTCTTACCCTAA+GGG 0.622164 7:-90597166 MsG0780041409.01.T01:CDS
GAGTATGCCAACACTGGACT+TGG 0.622664 7:-90596151 MsG0780041409.01.T01:CDS
ACTGGCACCAAGTCCAGTGT+TGG 0.624703 7:+90596144 None:intergenic
ACTTCAAGTTGAATTGCTGG+AGG 0.627546 7:+90597383 None:intergenic
AACGAGAATAAGAGAAACGA+CGG 0.628824 7:+90597966 None:intergenic
GATCGCCACTGAGTATGGAA+AGG 0.635117 7:-90597707 MsG0780041409.01.T01:CDS
CGTTTGAAGCTAAGGTAGTG+AGG 0.638275 7:+90595989 None:intergenic
CAAACCAGTCACAATGTCAA+GGG 0.640366 7:+90597414 None:intergenic
GGCCTTAATGACATTGTCAG+TGG 0.647643 7:+90597747 None:intergenic
TTATAAGGGTGTCATTAGCA+GGG 0.647659 7:-90596095 MsG0780041409.01.T01:CDS
GACTTGGTGCCAGTGTTGCG+AGG 0.649040 7:-90596135 MsG0780041409.01.T01:CDS
TCTTACCCTAAGGGAAACAA+AGG 0.651458 7:-90597157 MsG0780041409.01.T01:CDS
GAGGTGACTGTTGATGATCA+AGG 0.656331 7:-90597322 MsG0780041409.01.T01:CDS
CAACCAATTCCTCATATCAG+CGG 0.656720 7:+90597564 None:intergenic
GAATGTTAACAGCATCCTTG+GGG 0.658798 7:+90597083 None:intergenic
CAGAAGCAGAGATCCATGAA+GGG 0.662998 7:+90597296 None:intergenic
TACAACGTAATTGTCGCAGA+CGG 0.665049 7:-90596406 MsG0780041409.01.T01:CDS
GCTGTGGCATTTAGAAACGT+AGG 0.665169 7:-90596613 MsG0780041409.01.T01:CDS
GAAACTCTTAGTTCTGTGCG+TGG 0.680276 7:-90597820 MsG0780041409.01.T01:CDS
ATAAAGATGGATGGACCAAG+TGG 0.691992 7:-90596216 MsG0780041409.01.T01:CDS
CGTAGATTGTTGGATCAAGG+TGG 0.695440 7:+90596462 None:intergenic
CCTGAAAAGACCATTGTCAG+CGG 0.716672 7:-90597043 MsG0780041409.01.T01:CDS
AGCTTGGAGAAATATACCAG+CGG 0.725731 7:+90596054 None:intergenic
TATGAGGAATTGGTTGAGTG+CGG 0.729247 7:-90597557 MsG0780041409.01.T01:intron
ATGCAGCCAACACCGCAACG+GGG 0.748715 7:-90596690 MsG0780041409.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCTTTGATCGATAATAAT+TGG + Chr7:90597015-90597034 None:intergenic 20.0%
!!! ATTTTATTCATAAAGATGGA+TGG - Chr7:90597748-90597767 MsG0780041409.01.T01:CDS 20.0%
! ATAATTGGATTACATACCAA+AGG + Chr7:90597000-90597019 None:intergenic 25.0%
! ATGAATAAAATCACCAATTG+TGG + Chr7:90597739-90597758 None:intergenic 25.0%
! CCAGTATTCATATTCAATAT+CGG + Chr7:90597597-90597616 None:intergenic 25.0%
!! CAGATATTTTATCTACGTTA+AGG - Chr7:90596839-90596858 MsG0780041409.01.T01:intron 25.0%
!! GGTGATTTTATTCATAAAGA+TGG - Chr7:90597744-90597763 MsG0780041409.01.T01:CDS 25.0%
AACATGTCTCTTCATTTGTT+TGG + Chr7:90597794-90597813 None:intergenic 30.0%
AACATTCTTATGTATGGTGA+TGG - Chr7:90596906-90596925 MsG0780041409.01.T01:intron 30.0%
ACCTAATTGTGAATCTTTCA+GGG + Chr7:90597665-90597684 None:intergenic 30.0%
ATTCACAATTAGGTCTTACT+TGG - Chr7:90597671-90597690 MsG0780041409.01.T01:CDS 30.0%
CCGATATTGAATATGAATAC+TGG - Chr7:90597594-90597613 MsG0780041409.01.T01:CDS 30.0%
GCTGTTAACATTCTTATGTA+TGG - Chr7:90596900-90596919 MsG0780041409.01.T01:intron 30.0%
GTTTCTCTTATTCTCGTTAT+AGG - Chr7:90596012-90596031 MsG0780041409.01.T01:CDS 30.0%
TTCACAATTAGGTCTTACTT+GGG - Chr7:90597672-90597691 MsG0780041409.01.T01:CDS 30.0%
! TACCAGAGATAACACATTTT+CGG + Chr7:90597464-90597483 None:intergenic 30.0%
! TATTTTATCTACGTTAAGGC+TGG - Chr7:90596843-90596862 MsG0780041409.01.T01:intron 30.0%
!!! TCATTTGTTTGGTTTTTGTC+TGG + Chr7:90597783-90597802 None:intergenic 30.0%
AACGAGAATAAGAGAAACGA+CGG + Chr7:90596010-90596029 None:intergenic 35.0%
AAGAATGTTAACAGCATCCT+TGG + Chr7:90596895-90596914 None:intergenic 35.0%
AAGGATGGAGAGAAAATACT+AGG - Chr7:90596730-90596749 MsG0780041409.01.T01:intron 35.0%
ACCATGGAAGAATGAATCAA+AGG - Chr7:90597698-90597717 MsG0780041409.01.T01:CDS 35.0%
ACTGAGTATGGAAAGGAAAA+TGG - Chr7:90596273-90596292 MsG0780041409.01.T01:CDS 35.0%
AGAATGTTAACAGCATCCTT+GGG + Chr7:90596894-90596913 None:intergenic 35.0%
ATTGGATTACATACCAAAGG+TGG + Chr7:90596997-90597016 None:intergenic 35.0%
CTAAAATGCAACGAAAAGGA+TGG - Chr7:90596715-90596734 MsG0780041409.01.T01:intron 35.0%
CTACTCTCTCTTCATTCATA+AGG + Chr7:90597064-90597083 None:intergenic 35.0%
GACCTAATTGTGAATCTTTC+AGG + Chr7:90597666-90597685 None:intergenic 35.0%
GATCCTTTCACTCATGTTAA+AGG + Chr7:90596250-90596269 None:intergenic 35.0%
TACCGAAAATGTGTTATCTC+TGG - Chr7:90597459-90597478 MsG0780041409.01.T01:intron 35.0%
TCCCTGAAAGATTCACAATT+AGG - Chr7:90597661-90597680 MsG0780041409.01.T01:CDS 35.0%
TGTTCCAAAGATGAAGTCAA+TGG + Chr7:90597487-90597506 None:intergenic 35.0%
TTGGCTAAAATGCAACGAAA+AGG - Chr7:90596711-90596730 MsG0780041409.01.T01:intron 35.0%
TTTGTTGAGTTTGAACCTCA+GGG + Chr7:90596083-90596102 None:intergenic 35.0%
! ATTTTCCTTTCCATACTCAG+TGG + Chr7:90596274-90596293 None:intergenic 35.0%
! CTCGTTATAGGTGTTATCAT+CGG - Chr7:90596024-90596043 MsG0780041409.01.T01:CDS 35.0%
!! CAAACTTCAAGTTGAATTGC+TGG + Chr7:90596596-90596615 None:intergenic 35.0%
!! TTATAAGGGTGTCATTAGCA+GGG - Chr7:90597878-90597897 MsG0780041409.01.T01:CDS 35.0%
AAACCGCTGATATGAGGAAT+TGG - Chr7:90596406-90596425 MsG0780041409.01.T01:CDS 40.0%
AATTCCTCATATCAGCGGTT+TGG + Chr7:90596407-90596426 None:intergenic 40.0%
ACAAACCAGTCACAATGTCA+AGG + Chr7:90596563-90596582 None:intergenic 40.0%
AGAATACATCATTGTCCCCA+AGG - Chr7:90596875-90596894 MsG0780041409.01.T01:intron 40.0%
AGCCACTGACAATGTCATTA+AGG - Chr7:90596224-90596243 MsG0780041409.01.T01:CDS 40.0%
AGCTTGGAGAAATATACCAG+CGG + Chr7:90597922-90597941 None:intergenic 40.0%
AGGCCTTTAACATGAGTGAA+AGG - Chr7:90596244-90596263 MsG0780041409.01.T01:CDS 40.0%
AGTGTCCTGTGTCTTTATAC+CGG + Chr7:90596973-90596992 None:intergenic 40.0%
ATAAAGATGGATGGACCAAG+TGG - Chr7:90597757-90597776 MsG0780041409.01.T01:CDS 40.0%
ATGACATTTGAGAACACAGC+CGG - Chr7:90597321-90597340 MsG0780041409.01.T01:CDS 40.0%
CAAAAATGGTAAAGACCCTG+AGG - Chr7:90596065-90596084 MsG0780041409.01.T01:CDS 40.0%
CAAACCAGTCACAATGTCAA+GGG + Chr7:90596562-90596581 None:intergenic 40.0%
CAACCAATTCCTCATATCAG+CGG + Chr7:90596412-90596431 None:intergenic 40.0%
CTCTTACAGACAAGCTTGTA+TGG - Chr7:90596443-90596462 MsG0780041409.01.T01:CDS 40.0%
CTTTGTTGAGTTTGAACCTC+AGG + Chr7:90596084-90596103 None:intergenic 40.0%
GAATACTGGTATTGTGATCC+AGG - Chr7:90597608-90597627 MsG0780041409.01.T01:CDS 40.0%
GAATGTTAACAGCATCCTTG+GGG + Chr7:90596893-90596912 None:intergenic 40.0%
GATCGTAGATTGTTGGATCA+AGG + Chr7:90597517-90597536 None:intergenic 40.0%
GCAATTCCATGTTCAGAGTT+TGG - Chr7:90596509-90596528 MsG0780041409.01.T01:CDS 40.0%
GCACAGAACTAAGAGTTTCA+TGG + Chr7:90596152-90596171 None:intergenic 40.0%
GCCTTTGATTCATTCTTCCA+TGG + Chr7:90597702-90597721 None:intergenic 40.0%
GGATTTGACGATGCAAATGA+TGG - Chr7:90596468-90596487 MsG0780041409.01.T01:CDS 40.0%
GTCAAGTGGAAGGGTTATAA+GGG - Chr7:90597864-90597883 MsG0780041409.01.T01:CDS 40.0%
GTTGTCGACATTCGCAAAAA+TGG - Chr7:90596051-90596070 MsG0780041409.01.T01:CDS 40.0%
TACAACGTAATTGTCGCAGA+CGG - Chr7:90597567-90597586 MsG0780041409.01.T01:CDS 40.0%
TACAGACAAGCTTGTATGGA+AGG - Chr7:90596447-90596466 MsG0780041409.01.T01:CDS 40.0%
TATGAGGAATTGGTTGAGTG+CGG - Chr7:90596416-90596435 MsG0780041409.01.T01:CDS 40.0%
TCACGATGATCGTAGATTGT+TGG + Chr7:90597524-90597543 None:intergenic 40.0%
TCCTTGGCAACAACAACATT+AGG + Chr7:90596756-90596775 None:intergenic 40.0%
TCGTCGTCTTCTTAATTCTG+AGG - Chr7:90596632-90596651 MsG0780041409.01.T01:CDS 40.0%
TCTTACCCTAAGGGAAACAA+AGG - Chr7:90596816-90596835 MsG0780041409.01.T01:intron 40.0%
TTAAGAAGACGACGAGAAAG+AGG + Chr7:90596627-90596646 None:intergenic 40.0%
TTTGAACGTACAAGCTGTCT+TGG + Chr7:90597425-90597444 None:intergenic 40.0%
! AAAGGAAAATGGTGCCAAGA+TGG - Chr7:90596284-90596303 MsG0780041409.01.T01:CDS 40.0%
! AATGTTGTTGTTGCCAAGGA+TGG - Chr7:90596756-90596775 MsG0780041409.01.T01:intron 40.0%
! ATCTGCCTTTGTTTCCCTTA+GGG + Chr7:90596824-90596843 None:intergenic 40.0%
! GGACTTGATGCAATTTGCTT+TGG - Chr7:90596323-90596342 MsG0780041409.01.T01:CDS 40.0%
! TATCTGCCTTTGTTTCCCTT+AGG + Chr7:90596825-90596844 None:intergenic 40.0%
!! ACTTCAAGTTGAATTGCTGG+AGG + Chr7:90596593-90596612 None:intergenic 40.0%
!! GGTACCATTGACTTCATCTT+TGG - Chr7:90597480-90597499 MsG0780041409.01.T01:intron 40.0%
!! GTTATAAGGGTGTCATTAGC+AGG - Chr7:90597877-90597896 MsG0780041409.01.T01:CDS 40.0%
!!! CAGCCTGGATGGTTTTAAAT+TGG + Chr7:90596788-90596807 None:intergenic 40.0%
AACCATTCAGCTGCAGACTT+GGG + Chr7:90597948-90597967 None:intergenic 45.0%
ACATGCCGGTATAAAGACAC+AGG - Chr7:90596965-90596984 MsG0780041409.01.T01:intron 45.0%
ACGATCATCGTGAGAAAGTC+TGG - Chr7:90597531-90597550 MsG0780041409.01.T01:intron 45.0%
AGGAGATATGTCTGCTTTGG+TGG - Chr7:90597380-90597399 MsG0780041409.01.T01:CDS 45.0%
ATGACCAAACCGCTGATATG+AGG - Chr7:90596400-90596419 MsG0780041409.01.T01:CDS 45.0%
ATGATCAAGGACACCCTTCA+TGG - Chr7:90596664-90596683 MsG0780041409.01.T01:CDS 45.0%
CACGAACACAGTTGTTGGAA+AGG + Chr7:90596359-90596378 None:intergenic 45.0%
CAGAAGCAGAGATCCATGAA+GGG + Chr7:90596680-90596699 None:intergenic 45.0%
CAGCTGCTATGTATGCCTTA+GGG + Chr7:90596194-90596213 None:intergenic 45.0%
CCTGAAAAGACCATTGTCAG+CGG - Chr7:90596930-90596949 MsG0780041409.01.T01:intron 45.0%
CGTAGATTGTTGGATCAAGG+TGG + Chr7:90597514-90597533 None:intergenic 45.0%
CGTAGGAGATATGTCTGCTT+TGG - Chr7:90597377-90597396 MsG0780041409.01.T01:CDS 45.0%
GAGTTTCATGGCAGAGTTTC+TGG + Chr7:90596140-90596159 None:intergenic 45.0%
GAGTTTGGACACCGTACAAA+AGG - Chr7:90596524-90596543 MsG0780041409.01.T01:CDS 45.0%
GCTCTTGACTCTTACCCTAA+GGG - Chr7:90596807-90596826 MsG0780041409.01.T01:intron 45.0%
GCTGGTATATTTCTCCAAGC+TGG - Chr7:90597921-90597940 MsG0780041409.01.T01:CDS 45.0%
GCTGTGGCATTTAGAAACGT+AGG - Chr7:90597360-90597379 MsG0780041409.01.T01:CDS 45.0%
GCTTGTACGTTCAAAGCAAC+AGG - Chr7:90597430-90597449 MsG0780041409.01.T01:CDS 45.0%
GGAGATATGTCTGCTTTGGT+GGG - Chr7:90597381-90597400 MsG0780041409.01.T01:CDS 45.0%
GGCCTTAATGACATTGTCAG+TGG + Chr7:90596229-90596248 None:intergenic 45.0%
GGTAGAAAGAACCAACATGC+CGG - Chr7:90596951-90596970 MsG0780041409.01.T01:intron 45.0%
GGTCAAGTGGAAGGGTTATA+AGG - Chr7:90597863-90597882 MsG0780041409.01.T01:CDS 45.0%
GTCGTCATGGAATCCACAAT+TGG - Chr7:90597723-90597742 MsG0780041409.01.T01:CDS 45.0%
GTGTCTTTATACCGGCATGT+TGG + Chr7:90596965-90596984 None:intergenic 45.0%
GTTCTTTCTACCGCTGACAA+TGG + Chr7:90596943-90596962 None:intergenic 45.0%
GTTGAATTGCTGGAGGATGT+CGG + Chr7:90596586-90596605 None:intergenic 45.0%
GTTGTCACGAACACAGTTGT+TGG + Chr7:90596364-90596383 None:intergenic 45.0%
TCAGAAGCAGAGATCCATGA+AGG + Chr7:90596681-90596700 None:intergenic 45.0%
TGAATCAAAGGCAGTCGTCA+TGG - Chr7:90597710-90597729 MsG0780041409.01.T01:CDS 45.0%
TGCTCTTGACTCTTACCCTA+AGG - Chr7:90596806-90596825 MsG0780041409.01.T01:intron 45.0%
TTTGCAGAGTATGCCAACAC+TGG - Chr7:90597816-90597835 MsG0780041409.01.T01:CDS 45.0%
! AACAGCGGTGACCTTTTGTA+CGG + Chr7:90596538-90596557 None:intergenic 45.0%
! CGCTGACAATGGTCTTTTCA+GGG + Chr7:90596932-90596951 None:intergenic 45.0%
! CGGCCAATTTAAAACCATCC+AGG - Chr7:90596782-90596801 MsG0780041409.01.T01:intron 45.0%
! CGTTTGAAGCTAAGGTAGTG+AGG + Chr7:90597987-90598006 None:intergenic 45.0%
! GCCTAATGTTGTTGTTGCCA+AGG - Chr7:90596752-90596771 MsG0780041409.01.T01:intron 45.0%
! TGCTTCTGATCGCAAGCTTT+TGG - Chr7:90596692-90596711 MsG0780041409.01.T01:intron 45.0%
!! AGCGGTGAATTTGTTAGCCT+CGG + Chr7:90597904-90597923 None:intergenic 45.0%
!! GAAACTCTTAGTTCTGTGCG+TGG - Chr7:90596153-90596172 MsG0780041409.01.T01:CDS 45.0%
!! GAGGTGACTGTTGATGATCA+AGG - Chr7:90596651-90596670 MsG0780041409.01.T01:CDS 45.0%
!! TTGGTGGGTTGTCATATCGT+GGG - Chr7:90597396-90597415 MsG0780041409.01.T01:CDS 45.0%
!! TTGGTTTTTGTCTGGCCACT+TGG + Chr7:90597775-90597794 None:intergenic 45.0%
!! TTTGGTGGGTTGTCATATCG+TGG - Chr7:90597395-90597414 MsG0780041409.01.T01:CDS 45.0%
!!! GTTTCTGGTCTTGTGCGTTT+TGG + Chr7:90596125-90596144 None:intergenic 45.0%
AAATTGGCCGCTACCATCCT+TGG + Chr7:90596772-90596791 None:intergenic 50.0%
ATACATAGCAGCTGCCGTGA+AGG - Chr7:90596200-90596219 MsG0780041409.01.T01:CDS 50.0%
ATTGTCAGTGGCTGCCTTCA+CGG + Chr7:90596217-90596236 None:intergenic 50.0%
CAACCATTCAGCTGCAGACT+TGG + Chr7:90597949-90597968 None:intergenic 50.0%
CACAATGTCAAGGGCAACAG+CGG + Chr7:90596553-90596572 None:intergenic 50.0%
CGGTGTCCAAACTCTGAACA+TGG + Chr7:90596518-90596537 None:intergenic 50.0%
CTGGGATGATATTGCAGTCC+TGG + Chr7:90597629-90597648 None:intergenic 50.0%
GAAAGGATCGCCACTGAGTA+TGG - Chr7:90596261-90596280 MsG0780041409.01.T01:CDS 50.0%
GAGGCTAACAAATTCACCGC+TGG - Chr7:90597903-90597922 MsG0780041409.01.T01:CDS 50.0%
GAGTATGCCAACACTGGACT+TGG - Chr7:90597822-90597841 MsG0780041409.01.T01:CDS 50.0%
GATCGCCACTGAGTATGGAA+AGG - Chr7:90596266-90596285 MsG0780041409.01.T01:CDS 50.0%
GCAGCTGCTATGTATGCCTT+AGG + Chr7:90596195-90596214 None:intergenic 50.0%
GCAGTCATCAAGAGCCATCT+TGG + Chr7:90596301-90596320 None:intergenic 50.0%
GTTGCCCTTGACATTGTGAC+TGG - Chr7:90596555-90596574 MsG0780041409.01.T01:CDS 50.0%
GTTGTTGCCAAGGATGGTAG+CGG - Chr7:90596762-90596781 MsG0780041409.01.T01:intron 50.0%
! AAATGCCACAGCTTGCTCAC+CGG + Chr7:90597352-90597371 None:intergenic 50.0%
! CAGGGAACAATGCTGCTTCT+GGG + Chr7:90597647-90597666 None:intergenic 50.0%
! CCGCTGACAATGGTCTTTTC+AGG + Chr7:90596933-90596952 None:intergenic 50.0%
! GATGGCTCTTGATGACTGCA+AGG - Chr7:90596302-90596321 MsG0780041409.01.T01:CDS 50.0%
! TCAGGGAACAATGCTGCTTC+TGG + Chr7:90597648-90597667 None:intergenic 50.0%
AACACCGCAACGGGGTTCAT+TGG - Chr7:90597291-90597310 MsG0780041409.01.T01:CDS 55.0%
AATGAACCCCGTTGCGGTGT+TGG + Chr7:90597292-90597311 None:intergenic 55.0%
ACACAGGACACTGCCACCTT+TGG - Chr7:90596981-90597000 MsG0780041409.01.T01:intron 55.0%
ACTGGCACCAAGTCCAGTGT+TGG + Chr7:90597832-90597851 None:intergenic 55.0%
AGAGTCAAGAGCAGCCTGGA+TGG + Chr7:90596799-90596818 None:intergenic 55.0%
CCTTCCAATGAACCCCGTTG+CGG + Chr7:90597298-90597317 None:intergenic 55.0%
CGCAACGGGGTTCATTGGAA+GGG - Chr7:90597296-90597315 MsG0780041409.01.T01:CDS 55.0%
GACCCAAGTCTGCAGCTGAA+TGG - Chr7:90597943-90597962 MsG0780041409.01.T01:CDS 55.0%
GGTAAGAGTCAAGAGCAGCC+TGG + Chr7:90596803-90596822 None:intergenic 55.0%
GGTCTTACTTGGGCAGACCA+TGG - Chr7:90597682-90597701 MsG0780041409.01.T01:CDS 55.0%
TGCCTTAGGGTCAGCGACAT+CGG + Chr7:90596181-90596200 None:intergenic 55.0%
ATGCAGCCAACACCGCAACG+GGG - Chr7:90597283-90597302 MsG0780041409.01.T01:CDS 60.0%
CATGCAGCCAACACCGCAAC+GGG - Chr7:90597282-90597301 MsG0780041409.01.T01:CDS 60.0%
CCGCAACGGGGTTCATTGGA+AGG - Chr7:90597295-90597314 MsG0780041409.01.T01:CDS 60.0%
CTGCAGACTTGGGTCCAGCT+TGG + Chr7:90597938-90597957 None:intergenic 60.0%
CTTGACCCTCCTCGCAACAC+TGG + Chr7:90597850-90597869 None:intergenic 60.0%
GCATGCAGCCAACACCGCAA+CGG - Chr7:90597281-90597300 MsG0780041409.01.T01:CDS 60.0%
GCGAGGAGGGTCAAGTGGAA+GGG - Chr7:90597855-90597874 MsG0780041409.01.T01:CDS 60.0%
GTGTTGCGAGGAGGGTCAAG+TGG - Chr7:90597850-90597869 MsG0780041409.01.T01:CDS 60.0%
TGCGAGGAGGGTCAAGTGGA+AGG - Chr7:90597854-90597873 MsG0780041409.01.T01:CDS 60.0%
! TGGTGCCAGTGTTGCGAGGA+GGG - Chr7:90597842-90597861 MsG0780041409.01.T01:CDS 60.0%
!! GACTTGGTGCCAGTGTTGCG+AGG - Chr7:90597838-90597857 MsG0780041409.01.T01:CDS 60.0%
!! TGCGGTGTTGGCTGCATGCA+TGG + Chr7:90597280-90597299 None:intergenic 60.0%
!! TTGGTGCCAGTGTTGCGAGG+AGG - Chr7:90597841-90597860 MsG0780041409.01.T01:CDS 60.0%
CGCCGATGTCGCTGACCCTA+AGG - Chr7:90596176-90596195 MsG0780041409.01.T01:CDS 65.0%
GAGAACACAGCCGGTCCTGC+CGG - Chr7:90597330-90597349 MsG0780041409.01.T01:CDS 65.0%
TCCTGCCGGTGAGCAAGCTG+TGG - Chr7:90597344-90597363 MsG0780041409.01.T01:CDS 65.0%
! AGCTTGCTCACCGGCAGGAC+CGG + Chr7:90597343-90597362 None:intergenic 65.0%
!! GGGTGTCATTAGCAGGGCCG+AGG - Chr7:90597884-90597903 MsG0780041409.01.T01:CDS 65.0%
! GCCACAGCTTGCTCACCGGC+AGG + Chr7:90597348-90597367 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 90595985 90598010 90595985 ID=MsG0780041409.01;Name=MsG0780041409.01
Chr7 mRNA 90595985 90598010 90595985 ID=MsG0780041409.01.T01;Parent=MsG0780041409.01;Name=MsG0780041409.01.T01;_AED=0.48;_eAED=0.48;_QI=0|0|0|1|1|1|3|0|540
Chr7 exon 90597558 90598010 90597558 ID=MsG0780041409.01.T01:exon:20893;Parent=MsG0780041409.01.T01
Chr7 exon 90597023 90597470 90597023 ID=MsG0780041409.01.T01:exon:20892;Parent=MsG0780041409.01.T01
Chr7 exon 90595985 90596706 90595985 ID=MsG0780041409.01.T01:exon:20891;Parent=MsG0780041409.01.T01
Chr7 CDS 90597558 90598010 90597558 ID=MsG0780041409.01.T01:cds;Parent=MsG0780041409.01.T01
Chr7 CDS 90597023 90597470 90597023 ID=MsG0780041409.01.T01:cds;Parent=MsG0780041409.01.T01
Chr7 CDS 90595985 90596706 90595985 ID=MsG0780041409.01.T01:cds;Parent=MsG0780041409.01.T01
Gene Sequence

>MsG0780041409.01.T01

ATGAAGGGAAAGGTAATTATCTCCGTCGTTTCTCTTATTCTCGTTATAGGTGTTATCATCGGTGTTGTTGTCGACATTCGCAAAAATGGTAAAGACCCTGAGGTTCAAACTCAACAAAGATATCTTAGAATTGTGTGCCAAAACGCACAAGACCAGAAACTCTGCCATGAAACTCTTAGTTCTGTGCGTGGCGCCGATGTCGCTGACCCTAAGGCATACATAGCAGCTGCCGTGAAGGCAGCCACTGACAATGTCATTAAGGCCTTTAACATGAGTGAAAGGATCGCCACTGAGTATGGAAAGGAAAATGGTGCCAAGATGGCTCTTGATGACTGCAAGGACTTGATGCAATTTGCTTTGGACAGTCTTGACCTTTCCAACAACTGTGTTCGTGACAACAACATTCAAGCTGTTCATGACCAAACCGCTGATATGAGGAATTGGTTGAGTGCGAGTTTGGACACCGTACAAAAGGTCACCGCTGTTGCCCTTGACATTGTGACTGGTTTGTCCGACATCCTCCAGCAATTCAACTTGAAGTTTGATATCAAACCTCTTTCTCGTCGTCTTCTTAATTCTGAGGTGACTGTTGATGATCAAGGACACCCTTCATGGATCTCTGCTTCTGATCGCAAGCTTTTGGCTAAAATGCAACGAAAAGGATGGAGAGAAAATACTAGGCCTAATGTTGTTGTTGCCAAGGATGGTAGCGGCCAATTTAAAACCATCCAGGCTGCTCTTGACTCTTACCCTAAGGGAAACAAAGGCAGATATTTTATCTACGTTAAGGCTGGTGTCTATGAAGAATACATCATTGTCCCCAAGGATGCTGTTAACATTCTTATGTATGGTGATGGCCCTGAAAAGACCATTGTCAGCGGTAGAAAGAACCAACATGCCGCCAACACCGCAACGGGGTTCATTGGAAGGGCAATGACATTTGAGAACACAGCCGGTCCTGCCGGTGAGCAAGCTGTGGCATTTAGAAACGTAGGAGATATGTCTGCTTTGGTGGGTTGTCATATCGTGGGTTACCAAGACAGCTTGTACGTTCAAAGCAACAGGCAATTCTACCGAAAATGTGTTATCTCTGGTACCATTGACTTCATCTTTGGAACATCTGCCACCTTGATCCAACAATCTACGATCATCGTGAGAAAGTCTGGCAATAATAATCAATACAACGTAATTGTCGCAGACGGATCACCGATATTGAATATGAATACTGGTATTGTGATCCAGGACTGCAATATCATCCCAGAAGCAGCATTGTTCCCTGAAAGATTCACAATTAGGTCTTACTTGGGCAGACCATGGAAGAATGAATCAAAGGCAGTCGTCATGGAATCCACAATTGGTGATTTTATTCATAAAGATGGATGGACCAAGTGGCCAGACAAAAACCAAACAAATGAAGAGACATGTTACTTTGCAGAGTATGCCAACACTGGACTTGGTGCCAGTGTTGCGAGGAGGGTCAAGTGGAAGGGTTATAAGGGTGTCATTAGCAGGGCCGAGGCTAACAAATTCACCGCTGGTATATTTCTCCAAGCTGGACCCAAGTCTGCAGCTGAATGGTTGCACGATCTTCATGTTCCTCACTACCTTAGCTTCAAACGTTGA
Protein sequence

>MsG0780041409.01.T01

MKGKVIISVVSLILVIGVIIGVVVDIRKNGKDPEVQTQQRYLRIVCQNAQDQKLCHETLSSVRGADVADPKAYIAAAVKAATDNVIKAFNMSERIATEYGKENGAKMALDDCKDLMQFALDSLDLSNNCVRDNNIQAVHDQTADMRNWLSASLDTVQKVTAVALDIVTGLSDILQQFNLKFDIKPLSRRLLNSEVTVDDQGHPSWISASDRKLLAKMQRKGWRENTRPNVVVAKDGSGQFKTIQAALDSYPKGNKGRYFIYVKAGVYEEYIIVPKDAVNILMYGDGPEKTIVSGRKNQHAANTATGFIGRAMTFENTAGPAGEQAVAFRNVGDMSALVGCHIVGYQDSLYVQSNRQFYRKCVISGTIDFIFGTSATLIQQSTIIVRKSGNNNQYNVIVADGSPILNMNTGIVIQDCNIIPEAALFPERFTIRSYLGRPWKNESKAVVMESTIGDFIHKDGWTKWPDKNQTNEETCYFAEYANTGLGASVARRVKWKGYKGVISRAEANKFTAGIFLQAGPKSAAEWLHDLHVPHYLSFKR*