AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041412.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041412.01.T01 MTR_7g110440 91.139 474 27 3 1 472 116 576 0.0 891
MsG0780041412.01.T01 MTR_7g110430 83.122 474 31 4 1 472 116 542 0.0 798
MsG0780041412.01.T01 MTR_7g110490 81.646 474 72 3 1 472 116 576 0.0 798
MsG0780041412.01.T01 MTR_7g110510 81.646 474 72 3 1 472 116 576 0.0 798
MsG0780041412.01.T01 MTR_7g110420 76.132 486 89 6 1 472 116 588 0.0 746
MsG0780041412.01.T01 MTR_1g086210 60.127 474 167 6 1 471 116 570 0.0 580
MsG0780041412.01.T01 MTR_1g086190 50.740 473 201 8 1 470 120 563 6.12e-165 478
MsG0780041412.01.T01 MTR_7g110560 45.053 475 217 8 1 470 114 549 2.52e-133 396
MsG0780041412.01.T01 MTR_4g124550 42.437 476 232 10 1 470 154 593 4.62e-121 366
MsG0780041412.01.T01 MTR_8g088610 47.927 386 166 8 90 472 25 378 2.08e-120 357
MsG0780041412.01.T01 MTR_5g083620 47.074 376 173 7 98 471 6 357 1.05e-112 337
MsG0780041412.01.T01 MTR_8g023310 39.514 453 240 7 22 470 167 589 4.36e-102 317
MsG0780041412.01.T01 MTR_4g087980 40.000 445 213 8 26 464 122 518 1.24e-100 311
MsG0780041412.01.T01 MTR_8g042900 40.868 438 220 8 28 462 180 581 2.08e-100 312
MsG0780041412.01.T01 MTR_2g044880 39.189 444 221 8 26 464 128 527 7.43e-98 304
MsG0780041412.01.T01 MTR_4g120280 38.702 447 237 9 28 469 157 571 2.25e-97 305
MsG0780041412.01.T01 MTR_1g083470 37.978 445 234 11 28 467 160 567 2.28e-97 305
MsG0780041412.01.T01 MTR_1g083500 37.978 445 234 11 28 467 160 567 2.28e-97 305
MsG0780041412.01.T01 MTR_3g010780 39.421 449 234 9 1 449 148 558 2.35e-97 304
MsG0780041412.01.T01 MTR_1g008140 37.528 445 242 10 25 462 192 607 2.72e-97 305
MsG0780041412.01.T01 MTR_4g005170 37.303 445 237 11 28 467 165 572 1.61e-96 304
MsG0780041412.01.T01 MTR_1g083490 37.303 445 237 11 28 467 165 572 2.14e-96 302
MsG0780041412.01.T01 MTR_7g112590 36.008 486 260 11 1 469 131 582 3.50e-96 302
MsG0780041412.01.T01 MTR_8g104655 40.091 439 234 6 28 465 126 536 5.41e-96 300
MsG0780041412.01.T01 MTR_4g025690 38.095 441 219 9 25 465 122 508 3.64e-95 297
MsG0780041412.01.T01 MTR_4g120290 37.778 450 237 9 28 469 157 571 1.84e-94 297
MsG0780041412.01.T01 MTR_4g005180 36.629 445 240 11 28 467 147 554 2.67e-94 296
MsG0780041412.01.T01 MTR_8g104645 43.127 371 185 4 100 470 28 372 5.47e-94 289
MsG0780041412.01.T01 MTR_7g050950 37.054 448 237 9 8 449 129 537 6.98e-94 295
MsG0780041412.01.T01 MTR_7g050870 37.054 448 238 8 8 449 129 538 7.25e-94 295
MsG0780041412.01.T01 MTR_2g436040 36.229 472 255 10 1 468 115 544 8.71e-94 296
MsG0780041412.01.T01 MTR_7g108905 39.140 442 232 6 28 468 149 554 9.32e-94 295
MsG0780041412.01.T01 MTR_1g083510 36.989 465 240 13 27 472 155 585 2.59e-93 294
MsG0780041412.01.T01 MTR_1g083520 39.821 447 222 10 29 471 126 529 2.00e-92 290
MsG0780041412.01.T01 MTR_4g025730 37.808 447 221 11 25 470 119 509 2.48e-92 290
MsG0780041412.01.T01 MTR_7g108900 37.868 441 256 5 28 466 132 556 9.33e-92 290
MsG0780041412.01.T01 MTR_2g044660 46.828 331 153 5 140 470 325 632 1.46e-91 291
MsG0780041412.01.T01 MTR_3g091380 36.913 447 243 9 28 470 186 597 2.07e-91 290
MsG0780041412.01.T01 MTR_7g050980 36.161 448 242 8 8 449 130 539 2.15e-91 288
MsG0780041412.01.T01 MTR_4g087970 37.892 446 225 10 26 464 119 519 2.42e-91 287
MsG0780041412.01.T01 MTR_2g436050 36.730 471 263 8 1 469 126 563 4.51e-90 285
MsG0780041412.01.T01 MTR_8g023150 39.180 439 227 9 28 464 176 576 1.27e-87 279
MsG0780041412.01.T01 MTR_4g025670 35.575 461 244 7 10 469 80 488 1.90e-87 276
MsG0780041412.01.T01 MTR_2g044810 35.455 440 237 8 27 466 138 530 5.58e-87 276
MsG0780041412.01.T01 MTR_7g108890 36.771 446 253 8 28 462 135 562 1.23e-86 276
MsG0780041412.01.T01 MTR_7g112580 36.530 438 237 6 28 462 143 542 4.72e-86 274
MsG0780041412.01.T01 MTR_1g088020 36.703 455 250 9 28 470 127 555 6.18e-85 271
MsG0780041412.01.T01 MTR_7g053360 35.762 453 258 8 26 470 100 527 8.45e-85 270
MsG0780041412.01.T01 MTR_1g054880 36.264 455 250 9 28 470 132 558 1.22e-84 271
MsG0780041412.01.T01 MTR_3g008700 35.982 453 257 9 26 470 100 527 2.56e-84 269
MsG0780041412.01.T01 MTR_3g033690 37.011 435 241 9 44 470 117 526 2.44e-83 266
MsG0780041412.01.T01 MTR_3g008640 36.203 453 256 9 26 470 100 527 2.81e-83 266
MsG0780041412.01.T01 MTR_3g008720 35.982 453 257 9 26 470 100 527 2.95e-82 264
MsG0780041412.01.T01 MTR_1g088225 36.807 451 245 10 28 466 127 549 3.69e-82 264
MsG0780041412.01.T01 MTR_4g124520 35.377 424 229 9 28 448 123 504 7.66e-82 263
MsG0780041412.01.T01 MTR_7g108875 35.639 477 263 10 5 462 113 564 1.45e-79 258
MsG0780041412.01.T01 MTR_3g010770 44.554 303 159 3 171 470 279 575 1.41e-78 256
MsG0780041412.01.T01 MTR_4g035980 39.669 363 193 6 109 469 200 538 1.52e-78 254
MsG0780041412.01.T01 MTR_8g042910 41.088 331 179 4 138 464 296 614 3.48e-76 250
MsG0780041412.01.T01 MTR_0458s0030 45.113 266 140 2 205 470 55 314 5.92e-72 230
MsG0780041412.01.T01 MTR_1g088040 45.113 266 140 2 205 470 55 314 5.92e-72 230
MsG0780041412.01.T01 MTR_8g104580 34.396 439 226 8 28 465 118 495 1.14e-69 230
MsG0780041412.01.T01 MTR_2g044810 42.857 252 138 2 215 466 216 461 1.42e-69 229
MsG0780041412.01.T01 MTR_8g093460 32.981 473 262 14 8 469 122 550 1.57e-69 231
MsG0780041412.01.T01 MTR_0618s0020 46.522 230 118 1 241 470 4 228 2.84e-67 215
MsG0780041412.01.T01 MTR_3g095920 33.573 417 228 12 28 427 145 529 1.17e-63 216
MsG0780041412.01.T01 MTR_5g083590 36.970 330 139 6 144 472 9 270 1.46e-63 207
MsG0780041412.01.T01 MTR_7g111560 32.225 481 250 13 5 470 137 556 1.17e-55 194
MsG0780041412.01.T01 MTR_7g107180 32.154 311 191 5 164 470 13 307 6.65e-49 170
MsG0780041412.01.T01 MTR_0458s0010 30.820 451 237 13 28 466 127 514 3.14e-45 165
MsG0780041412.01.T01 MTR_6g088810 34.983 303 162 8 171 460 98 378 4.50e-43 156
MsG0780041412.01.T01 MTR_2g105560 30.259 347 210 7 125 470 24 339 6.22e-43 155
MsG0780041412.01.T01 MTR_2g039530 32.941 340 169 11 108 432 24 319 3.97e-42 153
MsG0780041412.01.T01 MTR_6g042660 33.840 263 151 5 170 427 52 296 4.07e-41 150
MsG0780041412.01.T01 MTR_8g102380 33.436 326 172 9 158 462 79 380 1.27e-39 147
MsG0780041412.01.T01 MTR_6g012800 31.068 309 184 7 171 466 22 314 2.89e-38 142
MsG0780041412.01.T01 MTR_1g033050 30.686 277 168 5 162 427 21 284 4.07e-38 141
MsG0780041412.01.T01 MTR_6g024165 31.661 319 175 10 144 450 43 330 4.41e-37 139
MsG0780041412.01.T01 MTR_7g092780 31.461 267 164 4 171 427 106 363 3.40e-36 138
MsG0780041412.01.T01 MTR_7g102600 29.924 264 169 3 171 427 115 369 2.08e-34 133
MsG0780041412.01.T01 MTR_7g011530 30.097 309 187 7 171 466 22 314 3.06e-33 128
MsG0780041412.01.T01 MTR_1g086540 30.952 294 168 5 144 427 52 320 3.98e-33 129
MsG0780041412.01.T01 MTR_8g102380 34.082 267 138 8 158 403 79 328 4.72e-31 122
MsG0780041412.01.T01 MTR_5g093970 30.153 262 167 5 170 428 58 306 5.67e-31 122
MsG0780041412.01.T01 MTR_8g036225 29.450 309 186 7 145 442 23 310 2.47e-30 120
MsG0780041412.01.T01 MTR_5g088300 30.420 286 169 4 143 428 38 293 2.88e-30 120
MsG0780041412.01.T01 MTR_6g042690 30.769 299 158 9 143 427 40 303 2.17e-29 118
MsG0780041412.01.T01 MTR_5g095490 30.000 270 165 6 170 427 76 333 9.15e-29 117
MsG0780041412.01.T01 MTR_4g124740 28.391 317 180 11 144 450 56 335 2.82e-27 112
MsG0780041412.01.T01 MTR_2g073390 28.472 288 175 7 144 425 73 335 1.64e-26 110
MsG0780041412.01.T01 MTR_4g074290 27.972 286 177 6 144 424 73 334 3.23e-26 109
MsG0780041412.01.T01 MTR_4g051810 29.365 252 160 4 177 427 58 292 3.77e-26 108
MsG0780041412.01.T01 MTR_5g088290 29.098 244 157 3 185 428 78 305 1.31e-25 107
MsG0780041412.01.T01 MTR_5g012600 28.625 269 168 6 171 427 79 335 1.92e-25 107
MsG0780041412.01.T01 MTR_5g088280 27.211 294 180 7 137 428 34 295 1.69e-24 104
MsG0780041412.01.T01 MTR_2g033970 27.170 265 173 5 170 427 71 322 2.43e-24 104
MsG0780041412.01.T01 MTR_2g436070 33.478 230 115 9 1 226 126 321 5.15e-23 100
MsG0780041412.01.T01 MTR_0009s0350 26.168 321 200 8 144 459 73 361 6.14e-23 100
MsG0780041412.01.T01 MTR_0009s0340 26.168 321 200 8 144 459 73 361 6.14e-23 100
MsG0780041412.01.T01 MTR_2g436600 24.906 265 170 9 170 427 70 312 7.67e-18 85.1
MsG0780041412.01.T01 MTR_6g025590 29.730 185 109 3 144 320 51 222 2.11e-17 82.0
MsG0780041412.01.T01 MTR_0408s0030 35.052 97 54 1 331 427 36 123 2.51e-15 73.6
MsG0780041412.01.T01 MTR_4g130790 26.407 231 134 8 177 395 47 253 6.71e-14 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041412.01.T01 AT2G47030 40.842 475 220 12 29 470 142 588 3.11e-112 343
MsG0780041412.01.T01 AT2G47040 40.041 482 221 11 29 470 142 595 7.08e-109 335
MsG0780041412.01.T01 AT4G33230 41.798 445 223 8 28 470 196 606 1.53e-108 334
MsG0780041412.01.T01 AT2G26450 41.441 444 217 9 28 470 210 611 1.71e-108 334
MsG0780041412.01.T01 AT5G49180 40.402 448 230 8 28 471 157 571 6.82e-108 332
MsG0780041412.01.T01 AT3G14310 39.474 456 237 7 28 470 163 592 3.67e-106 328
MsG0780041412.01.T01 AT3G62170 40.938 469 221 12 29 470 149 588 1.29e-103 321
MsG0780041412.01.T01 AT3G06830 36.441 472 263 10 2 466 123 564 2.14e-98 307
MsG0780041412.01.T01 AT1G53830 38.170 448 246 6 28 470 166 587 1.28e-97 305
MsG0780041412.01.T01 AT5G53370 38.255 447 244 6 25 470 170 585 3.08e-97 305
MsG0780041412.01.T01 AT3G05610 37.370 479 252 11 1 472 130 567 3.18e-97 307
MsG0780041412.01.T01 AT5G53370 38.255 447 244 6 25 470 206 621 1.03e-96 304
MsG0780041412.01.T01 AT5G27870 38.876 445 229 9 29 470 158 562 1.10e-96 307
MsG0780041412.01.T01 AT1G11580 38.824 425 224 6 27 451 155 543 1.13e-96 302
MsG0780041412.01.T01 AT1G11580 38.824 425 224 6 27 451 176 564 2.18e-96 302
MsG0780041412.01.T01 AT3G10710 39.414 444 219 9 28 470 167 561 2.05e-94 296
MsG0780041412.01.T01 AT5G04960 39.462 446 227 9 28 470 159 564 3.35e-93 293
MsG0780041412.01.T01 AT3G49220 37.557 442 244 9 28 464 184 598 1.24e-92 293
MsG0780041412.01.T01 AT3G14300 38.877 463 233 10 1 449 526 952 1.94e-92 301
MsG0780041412.01.T01 AT3G49220 37.557 442 244 9 28 464 229 643 5.08e-92 293
MsG0780041412.01.T01 AT4G02300 36.036 444 248 8 28 470 124 532 3.79e-91 287
MsG0780041412.01.T01 AT1G02810 36.308 493 272 9 1 470 104 577 3.56e-90 286
MsG0780041412.01.T01 AT3G43270 37.813 439 240 7 27 462 117 525 4.50e-90 284
MsG0780041412.01.T01 AT1G23200 36.534 479 253 10 1 465 108 549 2.58e-89 283
MsG0780041412.01.T01 AT2G45220 37.939 427 209 8 28 451 125 498 4.92e-89 281
MsG0780041412.01.T01 AT4G33220 35.440 443 259 7 27 464 105 525 2.42e-88 280
MsG0780041412.01.T01 AT1G53840 35.282 479 260 11 1 468 146 585 2.44e-87 279
MsG0780041412.01.T01 AT3G59010 35.683 454 238 9 8 448 99 511 1.24e-86 275
MsG0780041412.01.T01 AT5G51500 36.689 447 231 9 25 465 135 535 1.35e-86 275
MsG0780041412.01.T01 AT2G26440 35.909 440 249 6 27 466 137 543 1.49e-86 276
MsG0780041412.01.T01 AT2G43050 37.176 425 215 7 28 448 123 499 2.82e-86 274
MsG0780041412.01.T01 AT4G03930 35.654 474 252 10 1 470 100 524 1.23e-85 273
MsG0780041412.01.T01 AT3G05620 38.480 421 213 9 28 448 150 524 1.41e-85 273
MsG0780041412.01.T01 AT5G51490 36.303 449 238 9 25 470 133 536 2.91e-84 269
MsG0780041412.01.T01 AT4G33220 37.634 372 206 6 97 464 55 404 5.77e-84 265
MsG0780041412.01.T01 AT3G27980 36.508 441 227 9 32 470 108 497 6.64e-84 267
MsG0780041412.01.T01 AT1G11590 35.426 446 237 9 28 470 127 524 3.37e-83 266
MsG0780041412.01.T01 AT2G47550 36.998 473 261 11 10 472 115 560 5.13e-83 267
MsG0780041412.01.T01 AT4G02330 37.011 435 246 9 28 448 134 554 5.30e-82 265
MsG0780041412.01.T01 AT4G02320 32.911 474 270 8 6 468 80 516 1.00e-81 262
MsG0780041412.01.T01 AT3G47400 35.841 452 240 10 25 470 187 594 6.42e-79 257
MsG0780041412.01.T01 AT3G60730 36.697 436 241 9 24 449 93 503 4.10e-78 253
MsG0780041412.01.T01 AT4G00190 41.349 341 179 6 126 465 149 469 5.29e-78 251
MsG0780041412.01.T01 AT5G20860 34.419 430 229 12 25 448 139 521 2.51e-76 249
MsG0780041412.01.T01 AT4G15980 34.954 432 249 7 40 466 304 708 1.13e-75 251
MsG0780041412.01.T01 AT4G15980 34.954 432 249 7 40 466 294 698 1.20e-75 251
MsG0780041412.01.T01 AT3G10720 34.244 476 281 10 9 470 158 615 3.35e-75 248
MsG0780041412.01.T01 AT5G04970 33.781 447 267 9 33 470 194 620 1.68e-70 236
MsG0780041412.01.T01 AT3G10720 43.019 265 145 2 206 470 1 259 2.21e-65 212
MsG0780041412.01.T01 AT5G09760 31.064 470 267 14 5 450 107 543 5.44e-62 211
MsG0780041412.01.T01 AT5G20860 30.588 425 214 8 25 443 139 488 9.58e-62 209
MsG0780041412.01.T01 AT5G09760 31.064 470 267 14 5 450 133 569 1.37e-61 211
MsG0780041412.01.T01 AT1G11370 39.922 258 142 1 139 396 43 287 1.21e-60 200
MsG0780041412.01.T01 AT5G64640 31.544 447 241 12 28 450 189 594 1.47e-60 208
MsG0780041412.01.T01 AT5G19730 32.288 319 177 9 158 459 85 381 7.11e-39 145
MsG0780041412.01.T01 AT1G05310 32.422 256 154 4 182 427 118 364 3.26e-36 138
MsG0780041412.01.T01 AT3G29090 30.435 299 182 6 171 459 23 305 2.09e-35 134
MsG0780041412.01.T01 AT2G21610 28.758 306 185 7 144 448 53 326 1.07e-34 133
MsG0780041412.01.T01 AT2G21610 28.990 307 183 8 144 448 58 331 1.20e-34 133
MsG0780041412.01.T01 AT2G36700 30.405 296 179 6 171 459 58 333 1.39e-34 132
MsG0780041412.01.T01 AT2G19150 29.348 276 169 5 165 427 46 308 2.20e-33 129
MsG0780041412.01.T01 AT2G36710 27.609 297 191 5 170 459 106 385 6.35e-30 121
MsG0780041412.01.T01 AT1G44980 33.333 216 128 2 104 319 43 242 1.27e-29 116
MsG0780041412.01.T01 AT3G24130 30.370 270 160 6 171 427 50 304 8.69e-29 116
MsG0780041412.01.T01 AT5G18990 30.970 268 161 5 171 427 45 299 7.24e-28 114
MsG0780041412.01.T01 AT2G19150 29.200 250 151 5 165 401 46 282 2.38e-27 111
MsG0780041412.01.T01 AT5G07430 28.808 302 187 8 171 467 83 361 1.22e-26 110
MsG0780041412.01.T01 AT5G55590 28.866 291 180 7 170 448 97 372 2.10e-26 110
MsG0780041412.01.T01 AT3G17060 27.273 275 172 7 166 427 53 312 2.54e-26 109
MsG0780041412.01.T01 AT2G47280 28.458 253 157 6 185 427 65 303 3.02e-26 109
MsG0780041412.01.T01 AT5G07420 29.153 295 183 8 170 459 82 355 1.82e-25 107
MsG0780041412.01.T01 AT1G69940 26.885 305 196 8 162 459 71 355 3.44e-25 107
MsG0780041412.01.T01 AT5G55590 29.752 242 146 6 170 399 97 326 5.30e-25 105
MsG0780041412.01.T01 AT5G61680 26.801 347 207 10 119 459 53 358 8.08e-25 105
MsG0780041412.01.T01 AT5G07410 27.213 305 195 8 162 459 71 355 1.90e-24 104
MsG0780041412.01.T01 AT5G26810 26.599 297 183 6 143 427 35 308 2.73e-23 100
MsG0780041412.01.T01 AT5G47500 27.509 269 171 5 171 427 77 333 4.36e-23 100
MsG0780041412.01.T01 AT3G49220 30.000 210 118 8 28 235 229 411 2.11e-19 90.5

Find 155 sgRNAs with CRISPR-Local

Find 161 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACCTAATTGTGAATCTTTC+TGG 0.099938 7:+90614213 None:intergenic
TCTGGGAACAATGCTGCTTC+TGG 0.140362 7:+90614231 None:intergenic
GGTACCGTTGACTTCATCTT+TGG 0.268794 7:-90614393 MsG0780041412.01.T01:CDS
TTTGGTGGGTTGCCATATCC+TGG 0.295160 7:-90614478 MsG0780041412.01.T01:CDS
GGAGCATTCCATTTCAAGTT+TGG 0.298226 7:-90615471 MsG0780041412.01.T01:CDS
GAGCAGCCTGGAGTTTAAAT+TGG 0.305888 7:+90615195 None:intergenic
TGCTTCTGATCGCAAGCTTT+TGG 0.309615 7:-90615288 MsG0780041412.01.T01:CDS
TACGTTGTCCAAACTTGAAA+TGG 0.326402 7:+90615463 None:intergenic
CTCTTACAGACAAGCTTGTA+TGG 0.346784 7:-90615534 MsG0780041412.01.T01:CDS
AAAATTGGAGAGCAAATATT+AGG 0.356195 7:-90615250 MsG0780041412.01.T01:CDS
TCCCAGAAAGATTCACAATT+AGG 0.358624 7:-90614215 MsG0780041412.01.T01:CDS
ATCCAGATGGATGGACCATT+TGG 0.359061 7:-90614119 MsG0780041412.01.T01:CDS
CAAACTTCAAGTTGAATTGT+TGG 0.359804 7:+90615387 None:intergenic
CTGGGAACAATGCTGCTTCT+GGG 0.364314 7:+90614232 None:intergenic
CGCAACATTGGCACCAGGTC+CGG 0.374959 7:+90614047 None:intergenic
TGCCAAATGGTCCATCCATC+TGG 0.380894 7:+90614117 None:intergenic
GGACTTGATGCAATTCGCTT+TGG 0.392640 7:-90615651 None:intergenic
AATGCAGCCAACACCGCAAT+AGG 0.397980 7:-90614591 MsG0780041412.01.T01:intron
ATTCACAATTAGGTCTTACT+TGG 0.400367 7:-90614205 MsG0780041412.01.T01:CDS
ACCTAATTGTGAATCTTTCT+GGG 0.401139 7:+90614214 None:intergenic
ATCTGCCTTTGTTTCCCTTA+GGG 0.403495 7:+90614990 None:intergenic
ATCTGCCTTTGTTTCCCTTA+GGG 0.403495 7:+90615162 None:intergenic
ATGATCAAGGATACCCTTCA+TGG 0.403978 7:-90615316 MsG0780041412.01.T01:CDS
CAACCATTCAGCTGCAGACT+TGG 0.404932 7:+90613936 None:intergenic
TGTCTTGGTAACCCAGGATA+TGG 0.405890 7:+90614466 None:intergenic
AAGAATGTTAACAGCATCCT+TGG 0.413748 7:+90614919 None:intergenic
GAATACTGGTATTGTGATCC+AGG 0.415243 7:-90614268 MsG0780041412.01.T01:CDS
GTTATCACGGTGTCATTAGC+AGG 0.418426 7:-90614005 MsG0780041412.01.T01:CDS
TATCTGCCTTTGTTTCCCTT+AGG 0.428251 7:+90614989 None:intergenic
TATCTGCCTTTGTTTCCCTT+AGG 0.428251 7:+90615161 None:intergenic
CTGGGATGATATTGCAATCC+TGG 0.428634 7:+90614250 None:intergenic
AGGTGATATGTCTGCTTTGG+TGG 0.429553 7:-90614493 MsG0780041412.01.T01:CDS
CTTCATGTTCCTCACTACCT+TGG 0.439679 7:-90613907 MsG0780041412.01.T01:CDS
AAATTGGCCGCTACCATCCT+TGG 0.445482 7:+90615211 None:intergenic
GCTTGTATGTTCAAAGCAAC+AGG 0.449471 7:-90614443 MsG0780041412.01.T01:CDS
GCTGTTAACATTCTTATGTA+TGG 0.451888 7:-90614911 MsG0780041412.01.T01:CDS
AACACCGCAATAGGATTCAT+TGG 0.453609 7:-90614582 MsG0780041412.01.T01:CDS
GACACGATGAATTTGAATAC+TGG 0.454064 7:-90614282 MsG0780041412.01.T01:CDS
AGAATGTTAACAGCATCCTT+GGG 0.458467 7:+90614920 None:intergenic
TTACAATGATTGTAGAGTGT+TGG 0.460429 7:+90614352 None:intergenic
CCAACGCTGATATGAGGAAT+TGG 0.461260 7:-90615571 MsG0780041412.01.T01:CDS
GCCACAGCTTGGTGACCATC+AGG 0.462748 7:+90614528 None:intergenic
CAGATATGTTATCTATGTTA+AGG 0.463228 7:-90614972 MsG0780041412.01.T01:CDS
TGCTCTTGCCGCTTACCCTA+AGG 0.466378 7:-90615005 MsG0780041412.01.T01:CDS
TGCTCTTGCCGCTTACCCTA+AGG 0.466378 7:-90615177 MsG0780041412.01.T01:CDS
CCGGTGACAATGGTCCTGGC+AGG 0.470818 7:+90614881 None:intergenic
TACAATCATTGTAAGAAAGC+CGG 0.471256 7:-90614343 MsG0780041412.01.T01:CDS
TTTGAACATACAAGCTGTCT+TGG 0.474641 7:+90614451 None:intergenic
AAGTTTGGACAACGTACAAA+AGG 0.480973 7:-90615456 MsG0780041412.01.T01:CDS
ACCATGCAAACCGCCACCTT+CGG 0.488234 7:-90614830 MsG0780041412.01.T01:intron
TCATGACCAACGCTGATATG+AGG 0.493491 7:-90615577 MsG0780041412.01.T01:CDS
CCAAGGTGATATGTCTGCTT+TGG 0.497806 7:-90614496 MsG0780041412.01.T01:CDS
TTAAGAAGACGACGGGAAGC+AGG 0.500361 7:+90615356 None:intergenic
TGTGTCACGAACACAATTGT+TGG 0.501673 7:+90615613 None:intergenic
TTGGTGGGTTGCCATATCCT+GGG 0.504594 7:-90614477 MsG0780041412.01.T01:CDS
TACCGCAATTGTCTTGTCTC+TGG 0.505158 7:-90614414 MsG0780041412.01.T01:CDS
CCGTCGTCTTCTTAATTCTG+AGG 0.507152 7:-90615348 MsG0780041412.01.T01:CDS
GTCTTTGCTAAATACTTCCA+TGG 0.507528 7:+90614177 None:intergenic
AATGAATCCTATTGCGGTGT+TGG 0.507649 7:+90614584 None:intergenic
CTTGACCCTCCTCGCAACAT+TGG 0.507731 7:+90614035 None:intergenic
GGTAAGCGGCAAGAGCAGCC+TGG 0.509006 7:+90615183 None:intergenic
GACCCAAGTCTGCAGCTGAA+TGG 0.511381 7:-90613939 MsG0780041412.01.T01:CDS
CTGCAGACTTGGGTCCAGCT+TGG 0.511847 7:+90613947 None:intergenic
TTGTAAGAAAGCCGGGCAAA+GGG 0.511959 7:-90614335 MsG0780041412.01.T01:CDS
TCTACCGGTGACAATGGTCC+TGG 0.516015 7:+90614877 None:intergenic
ACCGAAGGTGGCGGTTTGCA+TGG 0.516360 7:+90614829 None:intergenic
ACAATCATTGTAAGAAAGCC+GGG 0.516509 7:-90614342 MsG0780041412.01.T01:CDS
GTTGCCCTTGATATTGTGAC+TGG 0.517274 7:-90615425 MsG0780041412.01.T01:CDS
ACAAACCAGTCACAATATCA+AGG 0.518765 7:+90615420 None:intergenic
ATTGTAAGAAAGCCGGGCAA+AGG 0.519046 7:-90614336 MsG0780041412.01.T01:CDS
ACTTCAAGTTGAATTGTTGG+AGG 0.520508 7:+90615390 None:intergenic
GTGTTGAATTGCCCTTTGCC+CGG 0.520802 7:+90614324 None:intergenic
GGTGATTTCATTCATCCAGA+TGG 0.521680 7:-90614132 MsG0780041412.01.T01:CDS
AACCATTCAGCTGCAGACTT+GGG 0.528556 7:+90613937 None:intergenic
TACAGACAAGCTTGTATGGA+AGG 0.531605 7:-90615530 MsG0780041412.01.T01:CDS
GGTTTCTAAATGCCACAGCT+TGG 0.532115 7:+90614517 None:intergenic
TGTATGGTGATGGCCCTGCC+AGG 0.536305 7:-90614895 MsG0780041412.01.T01:CDS
GAGTATGCCAACACCGGACC+TGG 0.539022 7:-90614060 MsG0780041412.01.T01:CDS
GCTGGTATATTTCTCCAAGC+TGG 0.539392 7:-90613961 MsG0780041412.01.T01:CDS
GATTGTAGAGTGTTGGATCA+AGG 0.540089 7:+90614359 None:intergenic
TGCGAGGAGGGTCAAGTGGA+AGG 0.542014 7:-90614028 MsG0780041412.01.T01:CDS
AACATTCTTATGTATGGTGA+TGG 0.542196 7:-90614905 MsG0780041412.01.T01:CDS
ATTTCATTCATCCAGATGGA+TGG 0.544462 7:-90614128 MsG0780041412.01.T01:CDS
AGCTTGGTGACCATCAGGAC+CGG 0.545068 7:+90614533 None:intergenic
TGGTGCCAATGTTGCGAGGA+GGG 0.545598 7:-90614040 MsG0780041412.01.T01:CDS
TAGCGGCCAATTTAAACTCC+AGG 0.552543 7:-90615201 MsG0780041412.01.T01:CDS
TCTGCAGCTGAATGGTTGAA+TGG 0.552700 7:-90613931 MsG0780041412.01.T01:CDS
CTTTCCAATGAATCCTATTG+CGG 0.553233 7:+90614578 None:intergenic
GTTGAATTGTTGGAGGATGT+CGG 0.557396 7:+90615397 None:intergenic
AATGAATTACGTACCGAAGG+TGG 0.558787 7:+90614817 None:intergenic
CTCAGAATTAAGAAGACGAC+GGG 0.558967 7:+90615349 None:intergenic
AGCAGCAAAGCTCTTTCTAC+CGG 0.560798 7:+90614862 None:intergenic
GCCTAATGCTGTTGTTGCCA+AGG 0.562131 7:-90615228 MsG0780041412.01.T01:CDS
TGATGGTGAGAAGAAGATCA+AGG 0.564440 7:-90615492 MsG0780041412.01.T01:CDS
TCCTTGGCAACAACAGCATT+AGG 0.564707 7:+90615227 None:intergenic
GTCGTCATGGAATCCACCAT+TGG 0.568648 7:-90614153 MsG0780041412.01.T01:CDS
CTCCTCGCAACATTGGCACC+AGG 0.570769 7:+90614042 None:intergenic
TTCAACACAATTACCGCAGA+CGG 0.571606 7:-90614309 MsG0780041412.01.T01:CDS
CCAATTCCTCATATCAGCGT+TGG 0.573713 7:+90615571 None:intergenic
AATGCTGTTGTTGCCAAGGA+TGG 0.574219 7:-90615224 MsG0780041412.01.T01:CDS
GCTCTTGCCGCTTACCCTAA+GGG 0.575306 7:-90615004 MsG0780041412.01.T01:CDS
GCTCTTGCCGCTTACCCTAA+GGG 0.575306 7:-90615176 MsG0780041412.01.T01:CDS
CGGTGTCATTAGCAGGGTCG+AGG 0.575906 7:-90613998 MsG0780041412.01.T01:CDS
GAGAACACAGCCGGTCCTGA+TGG 0.578001 7:-90614543 MsG0780041412.01.T01:CDS
GGTGATATGTCTGCTTTGGT+GGG 0.578012 7:-90614492 MsG0780041412.01.T01:CDS
GGTAGAAAGAGCTTTGCTGC+TGG 0.578567 7:-90614860 MsG0780041412.01.T01:CDS
TATGTTATCTATGTTAAGGC+CGG 0.579523 7:-90614968 MsG0780041412.01.T01:CDS
TCCTGATGGTCACCAAGCTG+TGG 0.579600 7:-90614529 MsG0780041412.01.T01:CDS
GCTCTTTCTACCGGTGACAA+TGG 0.580540 7:+90614871 None:intergenic
CACAATATCAAGGGCAACGG+CGG 0.580761 7:+90615430 None:intergenic
TTTGTTTCCCTTAGGGTAAG+CGG 0.581281 7:+90614997 None:intergenic
TTTGTTTCCCTTAGGGTAAG+CGG 0.581281 7:+90615169 None:intergenic
GGTCTTACTTGGGCAGACCA+TGG 0.585697 7:-90614194 MsG0780041412.01.T01:CDS
TCAGAAGCAGAGATCCATGA+AGG 0.586164 7:+90615302 None:intergenic
TTCACAATTAGGTCTTACTT+GGG 0.588154 7:-90614204 MsG0780041412.01.T01:CDS
CGCAATAGGATTCATTGGAA+AGG 0.589554 7:-90614577 MsG0780041412.01.T01:CDS
CGGTGACAATGGTCCTGGCA+GGG 0.594263 7:+90614882 None:intergenic
CCTGCCAGGACCATTGTCAC+CGG 0.595978 7:-90614881 MsG0780041412.01.T01:CDS
GCGAGGAGGGTCAAGTGGAA+GGG 0.598095 7:-90614027 MsG0780041412.01.T01:CDS
CGAATACATCACCGTCCCCA+AGG 0.601300 7:-90614936 MsG0780041412.01.T01:CDS
GAGGCTAACAAATTCACCGC+TGG 0.601385 7:-90613979 MsG0780041412.01.T01:CDS
TTTAGCAAAGACTGTCGTCA+TGG 0.602029 7:-90614166 MsG0780041412.01.T01:CDS
GGATTTGACGATGCAAATGA+TGG 0.605538 7:-90615509 MsG0780041412.01.T01:CDS
CTGGTGCCAATGTTGCGAGG+AGG 0.607556 7:-90614041 MsG0780041412.01.T01:CDS
ATGTTGCGAGGAGGGTCAAG+TGG 0.610852 7:-90614032 MsG0780041412.01.T01:CDS
GTTGTTGCCAAGGATGGTAG+CGG 0.612220 7:-90615218 MsG0780041412.01.T01:CDS
GAATTACGTACCGAAGGTGG+CGG 0.614214 7:+90614820 None:intergenic
ATGACATTTGAGAACACAGC+CGG 0.615960 7:-90614552 MsG0780041412.01.T01:CDS
CACGAACACAATTGTTGGAG+AGG 0.616011 7:+90615618 None:intergenic
CATCGTGTCTGATCCGTCTG+CGG 0.618955 7:+90614296 None:intergenic
ATTGGCACCAGGTCCGGTGT+TGG 0.620218 7:+90614053 None:intergenic
ATGAATGAAATCACCAATGG+TGG 0.621431 7:+90614140 None:intergenic
GTCAAGTGGAAGGGTTATCA+CGG 0.626410 7:-90614018 MsG0780041412.01.T01:CDS
GACCTGGTGCCAATGTTGCG+AGG 0.630608 7:-90614044 MsG0780041412.01.T01:CDS
GCTTTGAAGCCAAGGTAGTG+AGG 0.634761 7:+90613898 None:intergenic
GTTAACAGCATCCTTGGGGA+CGG 0.636571 7:+90614925 None:intergenic
GCTTACCCTAAGGGAAACAA+AGG 0.637176 7:-90614995 MsG0780041412.01.T01:CDS
GCTTACCCTAAGGGAAACAA+AGG 0.637176 7:-90615167 MsG0780041412.01.T01:CDS
ACAAGCTGTCTTGGTAACCC+AGG 0.643966 7:+90614460 None:intergenic
GATGGATGGACCATTTGGCA+AGG 0.645418 7:-90614114 MsG0780041412.01.T01:CDS
GAGGTGACTGTTGATGATCA+AGG 0.646018 7:-90615329 MsG0780041412.01.T01:CDS
CAAACCAGTCACAATATCAA+GGG 0.648210 7:+90615421 None:intergenic
CCAAAGCAGACATATCACCT+TGG 0.655162 7:+90614496 None:intergenic
GAATGTTAACAGCATCCTTG+GGG 0.658093 7:+90614921 None:intergenic
TTATCACGGTGTCATTAGCA+GGG 0.660828 7:-90614004 MsG0780041412.01.T01:CDS
GCTGTGGCATTTAGAAACCA+AGG 0.664254 7:-90614513 MsG0780041412.01.T01:CDS
TGATCCAAAGATGAAGTCAA+CGG 0.665055 7:+90614389 None:intergenic
TATGCAGAGTATGCCAACAC+CGG 0.669068 7:-90614066 MsG0780041412.01.T01:CDS
AGTCACAATATCAAGGGCAA+CGG 0.670723 7:+90615427 None:intergenic
CAGAAGCAGAGATCCATGAA+GGG 0.676064 7:+90615303 None:intergenic
GATGTATTCGTCATAGACAC+CGG 0.686816 7:+90614949 None:intergenic
CCTCAGAATTAAGAAGACGA+CGG 0.690163 7:+90615348 None:intergenic
TGGATGAATGAAATCACCAA+TGG 0.694304 7:+90614137 None:intergenic
TACCAGAGACAAGACAATTG+CGG 0.697140 7:+90614412 None:intergenic
AGCTTGGAGAAATATACCAG+CGG 0.725731 7:+90613963 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATGCAACGAAAAAAAAT+TGG - Chr7:90614443-90614462 MsG0780041412.01.T01:CDS 20.0%
!! ATTAGTAATTTAGATCACAT+TGG + Chr7:90614911-90614930 None:intergenic 20.0%
! AAAATTGGAGAGCAAATATT+AGG - Chr7:90614288-90614307 MsG0780041412.01.T01:CDS 25.0%
! ATACTCTTTCTTCATTCATA+AGG + Chr7:90614791-90614810 None:intergenic 25.0%
! CAGATATGTTATCTATGTTA+AGG - Chr7:90614394-90614413 MsG0780041412.01.T01:CDS 25.0%
! CTAAAATGCAACGAAAAAAT+TGG - Chr7:90614273-90614292 MsG0780041412.01.T01:CDS 25.0%
!! AAAGAGTATATGAGAAAAAG+TGG - Chr7:90614802-90614821 MsG0780041412.01.T01:intron 25.0%
AACATTCTTATGTATGGTGA+TGG - Chr7:90614633-90614652 MsG0780041412.01.T01:intron 30.0%
ACCTAATTGTGAATCTTTCT+GGG + Chr7:90615327-90615346 None:intergenic 30.0%
ATAAATGAATTACGTACCGA+AGG + Chr7:90614727-90614746 None:intergenic 30.0%
ATTCACAATTAGGTCTTACT+TGG - Chr7:90615333-90615352 MsG0780041412.01.T01:CDS 30.0%
GCTGTTAACATTCTTATGTA+TGG - Chr7:90614627-90614646 MsG0780041412.01.T01:intron 30.0%
TACAATCATTGTAAGAAAGC+CGG - Chr7:90615195-90615214 MsG0780041412.01.T01:CDS 30.0%
TATGTTATCTATGTTAAGGC+CGG - Chr7:90614398-90614417 MsG0780041412.01.T01:CDS 30.0%
TTACAATGATTGTAGAGTGT+TGG + Chr7:90615189-90615208 None:intergenic 30.0%
TTCACAATTAGGTCTTACTT+GGG - Chr7:90615334-90615353 MsG0780041412.01.T01:CDS 30.0%
!! CAAACTTCAAGTTGAATTGT+TGG + Chr7:90614154-90614173 None:intergenic 30.0%
AAGAATGTTAACAGCATCCT+TGG + Chr7:90614622-90614641 None:intergenic 35.0%
AAGTTTGGACAACGTACAAA+AGG - Chr7:90614082-90614101 MsG0780041412.01.T01:CDS 35.0%
ACAAACCAGTCACAATATCA+AGG + Chr7:90614121-90614140 None:intergenic 35.0%
ACAATCATTGTAAGAAAGCC+GGG - Chr7:90615196-90615215 MsG0780041412.01.T01:CDS 35.0%
AGAATGTTAACAGCATCCTT+GGG + Chr7:90614621-90614640 None:intergenic 35.0%
ATGAATGAAATCACCAATGG+TGG + Chr7:90615401-90615420 None:intergenic 35.0%
ATTTCATTCATCCAGATGGA+TGG - Chr7:90615410-90615429 MsG0780041412.01.T01:CDS 35.0%
CAAACCAGTCACAATATCAA+GGG + Chr7:90614120-90614139 None:intergenic 35.0%
CTTTCCAATGAATCCTATTG+CGG + Chr7:90614963-90614982 None:intergenic 35.0%
GACACGATGAATTTGAATAC+TGG - Chr7:90615256-90615275 MsG0780041412.01.T01:CDS 35.0%
GACCTAATTGTGAATCTTTC+TGG + Chr7:90615328-90615347 None:intergenic 35.0%
GTCTTTGCTAAATACTTCCA+TGG + Chr7:90615364-90615383 None:intergenic 35.0%
TACGTTGTCCAAACTTGAAA+TGG + Chr7:90614078-90614097 None:intergenic 35.0%
TCCCAGAAAGATTCACAATT+AGG - Chr7:90615323-90615342 MsG0780041412.01.T01:CDS 35.0%
TGATCCAAAGATGAAGTCAA+CGG + Chr7:90615152-90615171 None:intergenic 35.0%
TGGATGAATGAAATCACCAA+TGG + Chr7:90615404-90615423 None:intergenic 35.0%
TTTGAACATACAAGCTGTCT+TGG + Chr7:90615090-90615109 None:intergenic 35.0%
! ATTTTGTTCTCCTTGCCAAA+TGG + Chr7:90615437-90615456 None:intergenic 35.0%
!! ACTTCAAGTTGAATTGTTGG+AGG + Chr7:90614151-90614170 None:intergenic 35.0%
AACACCGCAATAGGATTCAT+TGG - Chr7:90614956-90614975 MsG0780041412.01.T01:CDS 40.0%
AATGAATCCTATTGCGGTGT+TGG + Chr7:90614957-90614976 None:intergenic 40.0%
AATGAATTACGTACCGAAGG+TGG + Chr7:90614724-90614743 None:intergenic 40.0%
AGCTTGGAGAAATATACCAG+CGG + Chr7:90615578-90615597 None:intergenic 40.0%
AGTCACAATATCAAGGGCAA+CGG + Chr7:90614114-90614133 None:intergenic 40.0%
ATGACATTTGAGAACACAGC+CGG - Chr7:90614986-90615005 MsG0780041412.01.T01:CDS 40.0%
ATGATCAAGGATACCCTTCA+TGG - Chr7:90614222-90614241 MsG0780041412.01.T01:CDS 40.0%
CCTCAGAATTAAGAAGACGA+CGG + Chr7:90614193-90614212 None:intergenic 40.0%
CGCAATAGGATTCATTGGAA+AGG - Chr7:90614961-90614980 MsG0780041412.01.T01:CDS 40.0%
CTCAGAATTAAGAAGACGAC+GGG + Chr7:90614192-90614211 None:intergenic 40.0%
CTCTTACAGACAAGCTTGTA+TGG - Chr7:90614004-90614023 MsG0780041412.01.T01:CDS 40.0%
GAATACTGGTATTGTGATCC+AGG - Chr7:90615270-90615289 MsG0780041412.01.T01:CDS 40.0%
GAATGTTAACAGCATCCTTG+GGG + Chr7:90614620-90614639 None:intergenic 40.0%
GATGTATTCGTCATAGACAC+CGG + Chr7:90614592-90614611 None:intergenic 40.0%
GCTTGTATGTTCAAAGCAAC+AGG - Chr7:90615095-90615114 MsG0780041412.01.T01:intron 40.0%
GGATTTGACGATGCAAATGA+TGG - Chr7:90614029-90614048 MsG0780041412.01.T01:CDS 40.0%
GGTGATTTCATTCATCCAGA+TGG - Chr7:90615406-90615425 MsG0780041412.01.T01:CDS 40.0%
GTTGAATTGTTGGAGGATGT+CGG + Chr7:90614144-90614163 None:intergenic 40.0%
TACAGACAAGCTTGTATGGA+AGG - Chr7:90614008-90614027 MsG0780041412.01.T01:CDS 40.0%
TACCAGAGACAAGACAATTG+CGG + Chr7:90615129-90615148 None:intergenic 40.0%
TGTGTCACGAACACAATTGT+TGG + Chr7:90613928-90613947 None:intergenic 40.0%
TTCAACACAATTACCGCAGA+CGG - Chr7:90615229-90615248 MsG0780041412.01.T01:CDS 40.0%
TTTAGCAAAGACTGTCGTCA+TGG - Chr7:90615372-90615391 MsG0780041412.01.T01:CDS 40.0%
TTTGTTTCCCTTAGGGTAAG+CGG + Chr7:90614372-90614391 None:intergenic 40.0%
! ATCTGCCTTTGTTTCCCTTA+GGG + Chr7:90614379-90614398 None:intergenic 40.0%
! TATCTGCCTTTGTTTCCCTT+AGG + Chr7:90614380-90614399 None:intergenic 40.0%
! TGATGGTGAGAAGAAGATCA+AGG - Chr7:90614046-90614065 MsG0780041412.01.T01:CDS 40.0%
!! GATTGTAGAGTGTTGGATCA+AGG + Chr7:90615182-90615201 None:intergenic 40.0%
!! GGAGCATTCCATTTCAAGTT+TGG - Chr7:90614067-90614086 MsG0780041412.01.T01:CDS 40.0%
!! TTATCACGGTGTCATTAGCA+GGG - Chr7:90615534-90615553 MsG0780041412.01.T01:CDS 40.0%
!!! CAGCCTGGATGGTTTTAAAT+TGG + Chr7:90614515-90614534 None:intergenic 40.0%
AACCATTCAGCTGCAGACTT+GGG + Chr7:90615604-90615623 None:intergenic 45.0%
AATGCTGTTGTTGCCAAGGA+TGG - Chr7:90614314-90614333 MsG0780041412.01.T01:CDS 45.0%
AGCAGCAAAGCTCTTTCTAC+CGG + Chr7:90614679-90614698 None:intergenic 45.0%
AGGTGATATGTCTGCTTTGG+TGG - Chr7:90615045-90615064 MsG0780041412.01.T01:intron 45.0%
ATCCAGATGGATGGACCATT+TGG - Chr7:90615419-90615438 MsG0780041412.01.T01:CDS 45.0%
ATTGTAAGAAAGCCGGGCAA+AGG - Chr7:90615202-90615221 MsG0780041412.01.T01:CDS 45.0%
CAAAAGCTTGCGATCAGAAC+CGG + Chr7:90614420-90614439 None:intergenic 45.0%
CACGAACACAATTGTTGGAG+AGG + Chr7:90613923-90613942 None:intergenic 45.0%
CAGAAGCAGAGATCCATGAA+GGG + Chr7:90614238-90614257 None:intergenic 45.0%
CCAAAGCAGACATATCACCT+TGG + Chr7:90615045-90615064 None:intergenic 45.0%
CCAACGCTGATATGAGGAAT+TGG - Chr7:90613967-90613986 MsG0780041412.01.T01:CDS 45.0%
CCAAGGTGATATGTCTGCTT+TGG - Chr7:90615042-90615061 MsG0780041412.01.T01:intron 45.0%
CCAATTCCTCATATCAGCGT+TGG + Chr7:90613970-90613989 None:intergenic 45.0%
CCGTCGTCTTCTTAATTCTG+AGG - Chr7:90614190-90614209 MsG0780041412.01.T01:CDS 45.0%
CTGGGATGATATTGCAATCC+TGG + Chr7:90615291-90615310 None:intergenic 45.0%
CTTCATGTTCCTCACTACCT+TGG - Chr7:90615631-90615650 MsG0780041412.01.T01:CDS 45.0%
GAGCAGCCTGGAGTTTAAAT+TGG + Chr7:90614346-90614365 None:intergenic 45.0%
GCTGGTATATTTCTCCAAGC+TGG - Chr7:90615577-90615596 MsG0780041412.01.T01:CDS 45.0%
GCTGTGGCATTTAGAAACCA+AGG - Chr7:90615025-90615044 MsG0780041412.01.T01:intron 45.0%
GCTTACCCTAAGGGAAACAA+AGG - Chr7:90614371-90614390 MsG0780041412.01.T01:CDS 45.0%
GGTGATATGTCTGCTTTGGT+GGG - Chr7:90615046-90615065 MsG0780041412.01.T01:intron 45.0%
GGTTTCTAAATGCCACAGCT+TGG + Chr7:90615024-90615043 None:intergenic 45.0%
GTCAAGTGGAAGGGTTATCA+CGG - Chr7:90615520-90615539 MsG0780041412.01.T01:CDS 45.0%
GTTGCCCTTGATATTGTGAC+TGG - Chr7:90614113-90614132 MsG0780041412.01.T01:CDS 45.0%
TACCGCAATTGTCTTGTCTC+TGG - Chr7:90615124-90615143 MsG0780041412.01.T01:intron 45.0%
TAGCGGCCAATTTAAACTCC+AGG - Chr7:90614337-90614356 MsG0780041412.01.T01:CDS 45.0%
TATGCAGAGTATGCCAACAC+CGG - Chr7:90615472-90615491 MsG0780041412.01.T01:CDS 45.0%
TCAGAAGCAGAGATCCATGA+AGG + Chr7:90614239-90614258 None:intergenic 45.0%
TCATGACCAACGCTGATATG+AGG - Chr7:90613961-90613980 MsG0780041412.01.T01:CDS 45.0%
TCCTTGGCAACAACAGCATT+AGG + Chr7:90614314-90614333 None:intergenic 45.0%
TCTGCAGCTGAATGGTTGAA+TGG - Chr7:90615607-90615626 MsG0780041412.01.T01:CDS 45.0%
TTGTAAGAAAGCCGGGCAAA+GGG - Chr7:90615203-90615222 MsG0780041412.01.T01:CDS 45.0%
! CGGCCAATTTAAAACCATCC+AGG - Chr7:90614509-90614528 MsG0780041412.01.T01:CDS 45.0%
! TGCTTCTGATCGCAAGCTTT+TGG - Chr7:90614250-90614269 MsG0780041412.01.T01:CDS 45.0%
! TGTCTTGGTAACCCAGGATA+TGG + Chr7:90615075-90615094 None:intergenic 45.0%
!! GAGGTGACTGTTGATGATCA+AGG - Chr7:90614209-90614228 MsG0780041412.01.T01:CDS 45.0%
!! GGTACCGTTGACTTCATCTT+TGG - Chr7:90615145-90615164 MsG0780041412.01.T01:intron 45.0%
!! GTTATCACGGTGTCATTAGC+AGG - Chr7:90615533-90615552 MsG0780041412.01.T01:CDS 45.0%
AAATTGGCCGCTACCATCCT+TGG + Chr7:90614330-90614349 None:intergenic 50.0%
AATGCAGCCAACACCGCAAT+AGG - Chr7:90614947-90614966 MsG0780041412.01.T01:CDS 50.0%
CAACCATTCAGCTGCAGACT+TGG + Chr7:90615605-90615624 None:intergenic 50.0%
CACAATATCAAGGGCAACGG+CGG + Chr7:90614111-90614130 None:intergenic 50.0%
GAATTACGTACCGAAGGTGG+CGG + Chr7:90614721-90614740 None:intergenic 50.0%
GAGGCTAACAAATTCACCGC+TGG - Chr7:90615559-90615578 MsG0780041412.01.T01:CDS 50.0%
GATGGATGGACCATTTGGCA+AGG - Chr7:90615424-90615443 MsG0780041412.01.T01:CDS 50.0%
GCCTAATGCTGTTGTTGCCA+AGG - Chr7:90614310-90614329 MsG0780041412.01.T01:CDS 50.0%
GCTCTTTCTACCGGTGACAA+TGG + Chr7:90614670-90614689 None:intergenic 50.0%
GGTAGAAAGAGCTTTGCTGC+TGG - Chr7:90614678-90614697 MsG0780041412.01.T01:intron 50.0%
GTCGTCATGGAATCCACCAT+TGG - Chr7:90615385-90615404 MsG0780041412.01.T01:CDS 50.0%
GTGTTGAATTGCCCTTTGCC+CGG + Chr7:90615217-90615236 None:intergenic 50.0%
GTTAACAGCATCCTTGGGGA+CGG + Chr7:90614616-90614635 None:intergenic 50.0%
GTTGTTGCCAAGGATGGTAG+CGG - Chr7:90614320-90614339 MsG0780041412.01.T01:CDS 50.0%
TGCCAAATGGTCCATCCATC+TGG + Chr7:90615424-90615443 None:intergenic 50.0%
TTAAGAAGACGACGGGAAGC+AGG + Chr7:90614185-90614204 None:intergenic 50.0%
! ACAAGCTGTCTTGGTAACCC+AGG + Chr7:90615081-90615100 None:intergenic 50.0%
! CTGGGAACAATGCTGCTTCT+GGG + Chr7:90615309-90615328 None:intergenic 50.0%
! TCTGGGAACAATGCTGCTTC+TGG + Chr7:90615310-90615329 None:intergenic 50.0%
!! CGGTTCTGATCGCAAGCTTT+TGG - Chr7:90614418-90614437 MsG0780041412.01.T01:CDS 50.0%
!! GCTTTGAAGCCAAGGTAGTG+AGG + Chr7:90615643-90615662 None:intergenic 50.0%
!! TTGGTGGGTTGCCATATCCT+GGG - Chr7:90615061-90615080 MsG0780041412.01.T01:intron 50.0%
!! TTTGGTGGGTTGCCATATCC+TGG - Chr7:90615060-90615079 MsG0780041412.01.T01:intron 50.0%
ACCATGCAAACCGCCACCTT+CGG - Chr7:90614708-90614727 MsG0780041412.01.T01:intron 55.0%
ATGTTGCGAGGAGGGTCAAG+TGG - Chr7:90615506-90615525 MsG0780041412.01.T01:CDS 55.0%
CATCGTGTCTGATCCGTCTG+CGG + Chr7:90615245-90615264 None:intergenic 55.0%
CGAATACATCACCGTCCCCA+AGG - Chr7:90614602-90614621 MsG0780041412.01.T01:intron 55.0%
CTTGACCCTCCTCGCAACAT+TGG + Chr7:90615506-90615525 None:intergenic 55.0%
GACCCAAGTCTGCAGCTGAA+TGG - Chr7:90615599-90615618 MsG0780041412.01.T01:CDS 55.0%
GGTCTTACTTGGGCAGACCA+TGG - Chr7:90615344-90615363 MsG0780041412.01.T01:CDS 55.0%
TCCTGATGGTCACCAAGCTG+TGG - Chr7:90615009-90615028 MsG0780041412.01.T01:CDS 55.0%
TCTACCGGTGACAATGGTCC+TGG + Chr7:90614664-90614683 None:intergenic 55.0%
! AGCTTGGTGACCATCAGGAC+CGG + Chr7:90615008-90615027 None:intergenic 55.0%
! GCTCTTGCCGCTTACCCTAA+GGG - Chr7:90614362-90614381 MsG0780041412.01.T01:CDS 55.0%
! TGCTCTTGCCGCTTACCCTA+AGG - Chr7:90614361-90614380 MsG0780041412.01.T01:CDS 55.0%
! TGGTGCCAATGTTGCGAGGA+GGG - Chr7:90615498-90615517 MsG0780041412.01.T01:CDS 55.0%
!! TGCGGTGTTGGCTGCATTCA+TGG + Chr7:90614945-90614964 None:intergenic 55.0%
ATTGGCACCAGGTCCGGTGT+TGG + Chr7:90615488-90615507 None:intergenic 60.0%
CCTGCCAGGACCATTGTCAC+CGG - Chr7:90614657-90614676 MsG0780041412.01.T01:intron 60.0%
CGCAACATTGGCACCAGGTC+CGG + Chr7:90615494-90615513 None:intergenic 60.0%
CGGTGACAATGGTCCTGGCA+GGG + Chr7:90614659-90614678 None:intergenic 60.0%
CTCCTCGCAACATTGGCACC+AGG + Chr7:90615499-90615518 None:intergenic 60.0%
CTGCAGACTTGGGTCCAGCT+TGG + Chr7:90615594-90615613 None:intergenic 60.0%
GAGAACACAGCCGGTCCTGA+TGG - Chr7:90614995-90615014 MsG0780041412.01.T01:CDS 60.0%
GAGTATGCCAACACCGGACC+TGG - Chr7:90615478-90615497 MsG0780041412.01.T01:CDS 60.0%
GCGAGGAGGGTCAAGTGGAA+GGG - Chr7:90615511-90615530 MsG0780041412.01.T01:CDS 60.0%
TGCGAGGAGGGTCAAGTGGA+AGG - Chr7:90615510-90615529 MsG0780041412.01.T01:CDS 60.0%
! ACCGAAGGTGGCGGTTTGCA+TGG + Chr7:90614712-90614731 None:intergenic 60.0%
! CTGGTGCCAATGTTGCGAGG+AGG - Chr7:90615497-90615516 MsG0780041412.01.T01:CDS 60.0%
! GACCTGGTGCCAATGTTGCG+AGG - Chr7:90615494-90615513 MsG0780041412.01.T01:CDS 60.0%
! GCCACAGCTTGGTGACCATC+AGG + Chr7:90615013-90615032 None:intergenic 60.0%
!! CGGTGTCATTAGCAGGGTCG+AGG - Chr7:90615540-90615559 MsG0780041412.01.T01:CDS 60.0%
!! TGTATGGTGATGGCCCTGCC+AGG - Chr7:90614643-90614662 MsG0780041412.01.T01:intron 60.0%
AGCGGCAAGAGCAGCCTGGA+TGG + Chr7:90614354-90614373 None:intergenic 65.0%
CCGGTGACAATGGTCCTGGC+AGG + Chr7:90614660-90614679 None:intergenic 65.0%
GGTAAGCGGCAAGAGCAGCC+TGG + Chr7:90614358-90614377 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 90613894 90615666 90613894 ID=MsG0780041412.01;Name=MsG0780041412.01
Chr7 mRNA 90613894 90615666 90613894 ID=MsG0780041412.01.T01;Parent=MsG0780041412.01;Name=MsG0780041412.01.T01;_AED=0.48;_eAED=0.48;_QI=0|0.5|0|1|1|1|3|0|472
Chr7 exon 90615160 90615666 90615160 ID=MsG0780041412.01.T01:exon:20900;Parent=MsG0780041412.01.T01
Chr7 exon 90614831 90615029 90614831 ID=MsG0780041412.01.T01:exon:20899;Parent=MsG0780041412.01.T01
Chr7 exon 90613894 90614606 90613894 ID=MsG0780041412.01.T01:exon:20898;Parent=MsG0780041412.01.T01
Chr7 CDS 90615160 90615666 90615160 ID=MsG0780041412.01.T01:cds;Parent=MsG0780041412.01.T01
Chr7 CDS 90614831 90615029 90614831 ID=MsG0780041412.01.T01:cds;Parent=MsG0780041412.01.T01
Chr7 CDS 90613894 90614606 90613894 ID=MsG0780041412.01.T01:cds;Parent=MsG0780041412.01.T01
Gene Sequence

>MsG0780041412.01.T01

ATGCAATTCGCTTTGGACAGTCTTGACCTCTCCAACAATTGTGTTCGTGACACAACATTCAAGCTGTTCATGACCAACGCTGATATGAGGAATTGGTTGAGTGCAGTTATCTCTTACAGACAAGCTTGTATGGAAGGATTTGACGATGCAAATGATGGTGAGAAGAAGATCAAGGAGCATTCCATTTCAAGTTTGGACAACGTACAAAAGGTCACCGCCGTTGCCCTTGATATTGTGACTGGTTTGTCCGACATCCTCCAACAATTCAACTTGAAGTTTGATGTCAAACCTGCTTCCCGTCGTCTTCTTAATTCTGAGGTGACTGTTGATGATCAAGGATACCCTTCATGGATCTCTGCTTCTGATCGCAAGCTTTTGGCTAAAATGCAACGAAAAAATTGGAGAGCAAATATTAGGCCTAATGCTGTTGTTGCCAAGGATGGTAGCGGCCAATTTAAACTCCAGGCTGCTCTTGCCGCTTACCCTAAGGGAAACAAAGGCAGATATGCTGCTCTTGCCGCTTACCCTAAGGGAAACAAAGGCAGATATGTTATCTATGTTAAGGCCGGTGTCTATGACGAATACATCACCGTCCCCAAGGATGCTGTTAACATTCTTATGTATGGTGATGGCCCTGCCAGGACCATTGTCACCGGTAGAAAGAGCTTTGCTGCTGGTGTCAAGACCATGCAAACCGCCACCTTCGCCAACACCGCAATAGGATTCATTGGAAAGGCAATGACATTTGAGAACACAGCCGGTCCTGATGGTCACCAAGCTGTGGCATTTAGAAACCAAGGTGATATGTCTGCTTTGGTGGGTTGCCATATCCTGGGTTACCAAGACAGCTTGTATGTTCAAAGCAACAGGCAGTACTACCGCAATTGTCTTGTCTCTGGTACCGTTGACTTCATCTTTGGATCATCTGCTACCTTGATCCAACACTCTACAATCATTGTAAGAAAGCCGGGCAAAGGGCAATTCAACACAATTACCGCAGACGGATCAGACACGATGAATTTGAATACTGGTATTGTGATCCAGGATTGCAATATCATCCCAGAAGCAGCATTGTTCCCAGAAAGATTCACAATTAGGTCTTACTTGGGCAGACCATGGAAGTATTTAGCAAAGACTGTCGTCATGGAATCCACCATTGGTGATTTCATTCATCCAGATGGATGGACCATTTGGCAAGGAGAACAAAATCACAACACATGTTACTATGCAGAGTATGCCAACACCGGACCTGGTGCCAATGTTGCGAGGAGGGTCAAGTGGAAGGGTTATCACGGTGTCATTAGCAGGGTCGAGGCTAACAAATTCACCGCTGGTATATTTCTCCAAGCTGGACCCAAGTCTGCAGCTGAATGGTTGAATGGTCTTCATGTTCCTCACTACCTTGGCTTCAAAGCTTGA
Protein sequence

>MsG0780041412.01.T01

MQFALDSLDLSNNCVRDTTFKLFMTNADMRNWLSAVISYRQACMEGFDDANDGEKKIKEHSISSLDNVQKVTAVALDIVTGLSDILQQFNLKFDVKPASRRLLNSEVTVDDQGYPSWISASDRKLLAKMQRKNWRANIRPNAVVAKDGSGQFKLQAALAAYPKGNKGRYAALAAYPKGNKGRYVIYVKAGVYDEYITVPKDAVNILMYGDGPARTIVTGRKSFAAGVKTMQTATFANTAIGFIGKAMTFENTAGPDGHQAVAFRNQGDMSALVGCHILGYQDSLYVQSNRQYYRNCLVSGTVDFIFGSSATLIQHSTIIVRKPGKGQFNTITADGSDTMNLNTGIVIQDCNIIPEAALFPERFTIRSYLGRPWKYLAKTVVMESTIGDFIHPDGWTIWQGEQNHNTCYYAEYANTGPGANVARRVKWKGYHGVISRVEANKFTAGIFLQAGPKSAAEWLNGLHVPHYLGFKA*