AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041410.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041410.01.T01 MTR_7g110440 94.271 576 33 0 1 576 1 576 0.0 1122
MsG0780041410.01.T01 MTR_7g110430 90.972 576 18 1 1 576 1 542 0.0 1034
MsG0780041410.01.T01 MTR_7g110490 85.243 576 85 0 1 576 1 576 0.0 1009
MsG0780041410.01.T01 MTR_7g110510 85.243 576 85 0 1 576 1 576 0.0 1009
MsG0780041410.01.T01 MTR_7g110420 83.844 588 83 3 1 576 1 588 0.0 969
MsG0780041410.01.T01 MTR_1g086210 61.352 577 214 5 1 575 1 570 0.0 716
MsG0780041410.01.T01 MTR_1g086190 50.172 582 263 9 1 574 1 563 0.0 570
MsG0780041410.01.T01 MTR_7g110560 43.664 584 284 13 1 574 1 549 2.85e-161 472
MsG0780041410.01.T01 MTR_4g124550 40.585 547 291 11 35 574 74 593 2.50e-137 412
MsG0780041410.01.T01 MTR_1g083470 36.661 581 326 14 6 571 14 567 1.31e-119 366
MsG0780041410.01.T01 MTR_1g083500 36.661 581 326 14 6 571 14 567 1.31e-119 366
MsG0780041410.01.T01 MTR_8g088610 48.794 373 169 7 207 576 25 378 1.99e-119 358
MsG0780041410.01.T01 MTR_2g436040 35.789 570 320 13 6 572 18 544 1.04e-117 362
MsG0780041410.01.T01 MTR_1g083490 34.014 588 342 13 4 571 11 572 3.62e-115 355
MsG0780041410.01.T01 MTR_4g005170 34.014 588 342 13 4 571 11 572 5.08e-115 356
MsG0780041410.01.T01 MTR_7g112590 34.064 593 346 12 4 573 12 582 7.21e-115 354
MsG0780041410.01.T01 MTR_4g120280 36.007 536 322 8 39 573 56 571 1.30e-113 350
MsG0780041410.01.T01 MTR_8g023310 37.269 542 311 9 42 574 68 589 1.66e-113 350
MsG0780041410.01.T01 MTR_5g083620 48.747 359 171 6 219 575 10 357 9.47e-113 340
MsG0780041410.01.T01 MTR_4g120290 34.807 543 333 8 32 573 49 571 1.92e-112 347
MsG0780041410.01.T01 MTR_4g005180 33.448 580 340 13 12 571 1 554 8.78e-112 345
MsG0780041410.01.T01 MTR_8g042900 38.590 539 296 12 36 566 70 581 1.07e-111 345
MsG0780041410.01.T01 MTR_1g083510 34.057 599 345 14 4 576 11 585 1.98e-111 345
MsG0780041410.01.T01 MTR_3g010780 37.500 536 286 12 41 562 70 570 4.42e-110 341
MsG0780041410.01.T01 MTR_2g436050 34.798 569 342 9 9 573 20 563 7.80e-108 335
MsG0780041410.01.T01 MTR_1g008140 34.188 585 341 15 6 566 43 607 9.90e-108 336
MsG0780041410.01.T01 MTR_8g023150 37.196 535 303 10 37 568 72 576 1.40e-105 330
MsG0780041410.01.T01 MTR_4g087980 36.194 536 275 12 54 568 29 518 7.32e-105 326
MsG0780041410.01.T01 MTR_7g050870 35.853 516 293 10 45 553 54 538 1.02e-104 327
MsG0780041410.01.T01 MTR_7g108905 34.820 583 340 9 1 572 1 554 1.65e-104 326
MsG0780041410.01.T01 MTR_3g091380 34.518 591 346 14 2 574 30 597 2.27e-104 327
MsG0780041410.01.T01 MTR_8g104655 36.038 530 310 8 43 569 33 536 4.94e-103 322
MsG0780041410.01.T01 MTR_2g044880 38.641 471 244 10 108 568 92 527 2.54e-100 314
MsG0780041410.01.T01 MTR_7g050950 34.875 519 293 11 45 553 54 537 1.39e-99 313
MsG0780041410.01.T01 MTR_7g112580 34.807 543 316 9 32 566 30 542 1.99e-99 312
MsG0780041410.01.T01 MTR_8g104645 44.847 359 183 4 217 574 28 372 6.40e-98 303
MsG0780041410.01.T01 MTR_1g083520 39.451 474 249 11 107 575 89 529 1.00e-96 305
MsG0780041410.01.T01 MTR_7g050980 36.667 450 253 6 106 553 120 539 1.15e-96 305
MsG0780041410.01.T01 MTR_2g044810 32.566 565 332 12 12 570 9 530 1.21e-96 305
MsG0780041410.01.T01 MTR_4g025690 37.500 464 241 9 106 569 94 508 3.76e-96 303
MsG0780041410.01.T01 MTR_2g044660 48.742 318 153 3 257 574 325 632 4.16e-95 304
MsG0780041410.01.T01 MTR_2g044660 26.549 226 136 7 1 206 21 236 1.06e-15 80.9
MsG0780041410.01.T01 MTR_4g087970 37.179 468 256 7 108 568 83 519 4.74e-95 300
MsG0780041410.01.T01 MTR_7g108900 35.338 532 326 9 45 570 37 556 6.48e-95 301
MsG0780041410.01.T01 MTR_4g025730 37.100 469 243 9 106 574 93 509 4.40e-94 297
MsG0780041410.01.T01 MTR_4g025670 36.306 471 250 9 107 573 64 488 3.72e-92 292
MsG0780041410.01.T01 MTR_7g108890 36.774 465 287 3 108 566 99 562 2.42e-91 292
MsG0780041410.01.T01 MTR_1g054880 36.383 481 274 9 108 574 96 558 1.21e-90 290
MsG0780041410.01.T01 MTR_1g088020 37.267 483 269 11 108 574 91 555 4.12e-89 286
MsG0780041410.01.T01 MTR_1g088225 37.370 479 264 12 108 570 91 549 1.57e-86 279
MsG0780041410.01.T01 MTR_4g124520 37.019 416 221 10 144 552 123 504 8.81e-86 276
MsG0780041410.01.T01 MTR_7g053360 35.991 439 262 7 143 574 101 527 8.10e-84 271
MsG0780041410.01.T01 MTR_7g108875 35.270 482 277 6 105 566 98 564 9.90e-84 272
MsG0780041410.01.T01 MTR_3g033690 37.204 422 246 8 160 574 117 526 3.86e-83 269
MsG0780041410.01.T01 MTR_3g008700 37.204 422 246 8 160 574 118 527 4.40e-83 269
MsG0780041410.01.T01 MTR_8g042910 34.615 494 268 9 108 568 143 614 5.78e-83 271
MsG0780041410.01.T01 MTR_3g010770 33.333 555 326 15 46 574 39 575 8.49e-83 270
MsG0780041410.01.T01 MTR_3g008640 37.441 422 245 8 160 574 118 527 9.32e-83 268
MsG0780041410.01.T01 MTR_3g008720 37.204 422 246 8 160 574 118 527 5.22e-82 266
MsG0780041410.01.T01 MTR_4g035980 40.909 352 191 6 226 573 200 538 5.90e-80 261
MsG0780041410.01.T01 MTR_8g104580 31.509 530 301 10 43 569 25 495 1.95e-77 254
MsG0780041410.01.T01 MTR_8g093460 30.387 543 324 15 46 573 47 550 5.74e-77 254
MsG0780041410.01.T01 MTR_0458s0030 45.113 266 140 2 309 574 55 314 3.64e-70 229
MsG0780041410.01.T01 MTR_1g088040 45.113 266 140 2 309 574 55 314 3.64e-70 229
MsG0780041410.01.T01 MTR_3g095920 30.709 508 300 12 46 531 52 529 2.61e-68 231
MsG0780041410.01.T01 MTR_2g044810 42.460 252 139 2 319 570 216 461 6.12e-68 228
MsG0780041410.01.T01 MTR_0618s0020 47.111 225 114 1 345 569 4 223 2.25e-66 216
MsG0780041410.01.T01 MTR_7g111560 31.419 592 322 18 5 574 27 556 1.68e-65 224
MsG0780041410.01.T01 MTR_5g083590 38.125 320 142 5 258 576 6 270 5.32e-64 211
MsG0780041410.01.T01 MTR_7g107180 32.390 318 198 5 258 574 6 307 1.37e-50 177
MsG0780041410.01.T01 MTR_0458s0010 31.733 479 256 16 108 570 91 514 4.29e-50 181
MsG0780041410.01.T01 MTR_2g105560 31.138 334 211 5 242 574 24 339 6.03e-47 168
MsG0780041410.01.T01 MTR_2g436070 32.440 336 189 10 4 330 15 321 2.58e-44 162
MsG0780041410.01.T01 MTR_6g042660 34.173 278 160 5 259 531 37 296 6.86e-44 159
MsG0780041410.01.T01 MTR_6g088810 34.727 311 168 8 267 564 90 378 4.78e-43 158
MsG0780041410.01.T01 MTR_2g039530 33.231 325 175 8 225 536 24 319 1.31e-42 156
MsG0780041410.01.T01 MTR_6g012800 30.462 325 197 7 259 570 6 314 1.48e-41 152
MsG0780041410.01.T01 MTR_6g024165 33.438 317 178 9 252 554 33 330 1.84e-40 150
MsG0780041410.01.T01 MTR_1g033050 31.900 279 170 4 260 531 19 284 1.45e-39 147
MsG0780041410.01.T01 MTR_8g102380 33.230 322 178 8 260 566 81 380 3.28e-39 148
MsG0780041410.01.T01 MTR_7g092780 31.095 283 176 4 259 531 90 363 1.26e-37 144
MsG0780041410.01.T01 MTR_7g011530 29.721 323 198 6 261 570 8 314 6.49e-36 137
MsG0780041410.01.T01 MTR_7g102600 29.123 285 186 3 254 531 94 369 1.44e-35 138
MsG0780041410.01.T01 MTR_1g086540 32.384 281 168 4 261 531 52 320 1.50e-35 137
MsG0780041410.01.T01 MTR_5g093970 30.686 277 176 5 259 532 43 306 2.51e-35 136
MsG0780041410.01.T01 MTR_6g042690 32.517 286 159 7 259 531 39 303 2.42e-34 133
MsG0780041410.01.T01 MTR_5g088300 32.117 274 169 3 259 532 37 293 1.98e-33 130
MsG0780041410.01.T01 MTR_8g036225 30.769 299 175 7 259 546 33 310 5.65e-33 129
MsG0780041410.01.T01 MTR_5g095490 30.466 279 170 6 265 531 67 333 2.88e-31 125
MsG0780041410.01.T01 MTR_8g102380 33.840 263 144 7 260 507 81 328 5.83e-31 123
MsG0780041410.01.T01 MTR_2g073390 30.634 284 178 7 253 529 64 335 1.33e-30 123
MsG0780041410.01.T01 MTR_4g124740 29.739 306 181 10 259 554 54 335 3.40e-30 121
MsG0780041410.01.T01 MTR_5g088290 29.818 275 175 4 259 532 48 305 2.36e-29 119
MsG0780041410.01.T01 MTR_4g074290 29.455 275 178 5 259 528 71 334 2.42e-29 119
MsG0780041410.01.T01 MTR_5g088280 28.315 279 183 4 254 532 34 295 2.09e-28 116
MsG0780041410.01.T01 MTR_4g051810 28.938 273 177 3 259 531 37 292 2.16e-28 116
MsG0780041410.01.T01 MTR_5g012600 28.772 285 179 5 259 531 63 335 2.55e-28 117
MsG0780041410.01.T01 MTR_2g033970 27.636 275 179 5 264 531 61 322 1.33e-27 114
MsG0780041410.01.T01 MTR_0009s0350 27.742 310 200 7 259 563 71 361 3.23e-26 110
MsG0780041410.01.T01 MTR_0009s0340 27.742 310 200 7 259 563 71 361 3.23e-26 110
MsG0780041410.01.T01 MTR_6g025590 32.432 185 116 3 249 424 38 222 2.33e-21 94.0
MsG0780041410.01.T01 MTR_2g436600 26.619 278 169 10 264 531 60 312 3.04e-20 92.8
MsG0780041410.01.T01 MTR_0408s0030 35.052 97 54 1 435 531 36 123 1.78e-15 74.3
MsG0780041410.01.T01 MTR_4g130790 30.872 149 90 5 283 422 48 192 4.53e-14 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041410.01.T01 AT2G47030 38.424 609 319 15 1 574 1 588 3.36e-134 404
MsG0780041410.01.T01 AT2G47040 37.987 616 319 15 1 574 1 595 1.75e-132 399
MsG0780041410.01.T01 AT3G62170 37.686 605 324 15 3 574 4 588 4.52e-125 380
MsG0780041410.01.T01 AT5G27870 37.326 576 325 12 5 574 17 562 1.83e-122 378
MsG0780041410.01.T01 AT3G05610 36.130 584 336 11 2 576 12 567 1.51e-120 371
MsG0780041410.01.T01 AT4G33230 38.848 538 298 11 42 574 95 606 2.65e-119 366
MsG0780041410.01.T01 AT5G49180 36.054 588 337 12 2 575 9 571 3.52e-119 364
MsG0780041410.01.T01 AT3G10710 37.586 580 308 13 5 574 26 561 3.44e-117 359
MsG0780041410.01.T01 AT2G26450 37.803 537 296 12 42 574 109 611 4.19e-117 360
MsG0780041410.01.T01 AT3G14310 37.297 555 305 11 42 574 59 592 2.74e-115 355
MsG0780041410.01.T01 AT5G53370 35.897 585 333 12 2 574 31 585 3.33e-110 342
MsG0780041410.01.T01 AT5G53370 35.897 585 333 12 2 574 67 621 8.91e-110 342
MsG0780041410.01.T01 AT5G04960 36.063 574 311 13 14 574 34 564 1.66e-109 339
MsG0780041410.01.T01 AT1G53830 35.263 570 336 10 20 574 36 587 2.94e-107 334
MsG0780041410.01.T01 AT1G53840 34.973 549 321 11 33 572 64 585 1.21e-104 327
MsG0780041410.01.T01 AT3G14300 37.452 526 293 13 37 553 454 952 2.39e-104 337
MsG0780041410.01.T01 AT3G06830 35.046 545 321 13 35 570 44 564 2.69e-103 323
MsG0780041410.01.T01 AT1G11580 34.477 554 328 10 5 555 22 543 1.48e-102 321
MsG0780041410.01.T01 AT1G11580 34.477 554 328 10 5 555 43 564 3.06e-102 321
MsG0780041410.01.T01 AT3G49220 34.261 575 340 11 6 568 50 598 2.12e-100 317
MsG0780041410.01.T01 AT3G49220 34.261 575 340 11 6 568 95 643 5.42e-100 317
MsG0780041410.01.T01 AT3G43270 36.454 502 295 8 70 566 43 525 1.21e-97 307
MsG0780041410.01.T01 AT1G23200 36.162 542 298 13 46 569 38 549 2.00e-96 305
MsG0780041410.01.T01 AT2G26440 33.457 541 332 9 33 570 28 543 3.33e-95 301
MsG0780041410.01.T01 AT3G05620 37.550 498 258 13 69 552 66 524 9.42e-95 300
MsG0780041410.01.T01 AT4G02300 35.106 470 276 7 106 574 91 532 6.74e-94 298
MsG0780041410.01.T01 AT4G33220 35.669 471 280 7 108 568 68 525 5.98e-93 295
MsG0780041410.01.T01 AT2G45220 32.743 565 300 13 1 555 4 498 1.43e-92 293
MsG0780041410.01.T01 AT1G02810 36.970 495 275 11 108 574 92 577 7.46e-92 294
MsG0780041410.01.T01 AT2G43050 34.949 495 279 9 59 552 47 499 8.74e-92 292
MsG0780041410.01.T01 AT4G03930 38.479 434 228 8 144 574 127 524 1.12e-91 291
MsG0780041410.01.T01 AT3G59010 34.801 477 278 8 76 552 68 511 3.15e-90 288
MsG0780041410.01.T01 AT2G47550 36.952 479 275 8 108 576 99 560 2.07e-89 287
MsG0780041410.01.T01 AT3G27980 37.237 427 231 7 148 574 108 497 1.32e-88 283
MsG0780041410.01.T01 AT5G51500 35.130 501 276 11 78 569 75 535 2.29e-88 283
MsG0780041410.01.T01 AT1G11590 36.406 434 237 7 144 574 127 524 2.89e-87 280
MsG0780041410.01.T01 AT4G02330 33.458 535 315 11 45 552 34 554 1.61e-86 280
MsG0780041410.01.T01 AT5G51490 35.119 504 282 10 78 574 71 536 2.54e-86 278
MsG0780041410.01.T01 AT4G00190 33.081 529 284 12 45 569 7 469 3.09e-85 273
MsG0780041410.01.T01 AT4G33220 38.268 358 210 3 214 568 55 404 1.11e-84 270
MsG0780041410.01.T01 AT4G02320 30.830 506 317 8 74 572 37 516 1.46e-84 273
MsG0780041410.01.T01 AT3G47400 32.781 543 315 12 46 574 88 594 9.34e-84 273
MsG0780041410.01.T01 AT3G10720 32.545 550 333 14 46 574 83 615 1.45e-81 268
MsG0780041410.01.T01 AT3G60730 34.190 506 292 9 57 554 32 504 3.72e-80 261
MsG0780041410.01.T01 AT5G20860 30.916 524 318 11 39 552 32 521 4.63e-80 261
MsG0780041410.01.T01 AT4G15980 36.496 411 246 5 161 570 302 698 9.72e-79 262
MsG0780041410.01.T01 AT4G15980 36.496 411 246 5 161 570 312 708 1.36e-78 262
MsG0780041410.01.T01 AT5G04970 31.703 552 339 14 44 574 86 620 2.22e-77 257
MsG0780041410.01.T01 AT5G20860 28.131 519 301 9 39 547 32 488 2.02e-66 225
MsG0780041410.01.T01 AT5G09760 30.228 526 327 14 42 554 45 543 2.18e-65 223
MsG0780041410.01.T01 AT3G10720 43.396 265 144 2 310 574 1 259 2.63e-65 214
MsG0780041410.01.T01 AT5G09760 30.228 526 327 14 42 554 71 569 3.97e-65 223
MsG0780041410.01.T01 AT5G64640 29.499 539 317 16 42 554 93 594 1.43e-63 219
MsG0780041410.01.T01 AT1G11370 41.633 245 143 0 256 500 43 287 1.43e-62 208
MsG0780041410.01.T01 AT3G29090 31.338 284 174 4 259 532 7 279 8.59e-39 145
MsG0780041410.01.T01 AT1G05310 31.449 283 175 4 259 531 91 364 2.13e-38 146
MsG0780041410.01.T01 AT2G21610 30.068 296 185 6 259 552 51 326 5.39e-38 144
MsG0780041410.01.T01 AT2G21610 30.545 275 172 5 259 531 56 313 6.97e-38 144
MsG0780041410.01.T01 AT5G19730 32.075 318 181 8 259 563 86 381 8.55e-38 144
MsG0780041410.01.T01 AT2G36700 30.645 310 188 6 261 563 44 333 1.37e-37 142
MsG0780041410.01.T01 AT2G19150 30.104 289 177 6 253 531 35 308 2.92e-36 139
MsG0780041410.01.T01 AT3G24130 32.168 286 166 6 259 531 34 304 2.20e-34 133
MsG0780041410.01.T01 AT5G18990 32.746 284 167 6 259 531 29 299 9.03e-34 131
MsG0780041410.01.T01 AT2G36710 28.571 287 187 4 252 529 82 359 1.44e-32 130
MsG0780041410.01.T01 AT1G44980 33.990 203 131 1 221 423 43 242 8.89e-32 123
MsG0780041410.01.T01 AT2G19150 29.119 261 164 4 253 505 35 282 2.17e-30 120
MsG0780041410.01.T01 AT5G07420 29.167 360 221 11 222 571 26 361 4.15e-30 122
MsG0780041410.01.T01 AT5G55590 29.677 310 191 7 255 552 78 372 5.40e-30 122
MsG0780041410.01.T01 AT2G47280 28.622 283 178 6 259 531 35 303 6.35e-30 120
MsG0780041410.01.T01 AT5G07430 29.283 321 199 8 256 571 64 361 4.03e-29 119
MsG0780041410.01.T01 AT5G61680 28.743 334 204 9 236 563 53 358 5.19e-29 119
MsG0780041410.01.T01 AT5G55590 30.651 261 157 6 255 503 78 326 1.05e-28 117
MsG0780041410.01.T01 AT1G69940 25.967 362 232 10 215 563 17 355 1.49e-27 114
MsG0780041410.01.T01 AT3G17060 25.795 283 186 6 258 531 45 312 1.51e-27 114
MsG0780041410.01.T01 AT5G26810 27.113 284 187 3 259 531 34 308 3.65e-27 113
MsG0780041410.01.T01 AT5G07410 25.627 359 237 8 215 563 17 355 6.13e-27 112
MsG0780041410.01.T01 AT5G47500 27.273 308 200 6 236 531 38 333 2.74e-26 110
MsG0780041410.01.T01 AT3G49220 27.405 343 214 10 6 339 95 411 5.48e-26 111

Find 177 sgRNAs with CRISPR-Local

Find 189 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGTTTCATGGCAGAGTTTC+TGG 0.121996 7:+90602331 None:intergenic
GAGCCTTTCACTCATGTTAA+AGG 0.180572 7:+90602221 None:intergenic
GGTACCGTTGATTTCATCTT+TGG 0.218387 7:-90601049 MsG0780041410.01.T01:CDS
TCAAGGAACAATGTTGCTTC+TGG 0.222053 7:+90600887 None:intergenic
CTTTGTTGAGTTTGAACCTT+AGG 0.245225 7:+90602387 None:intergenic
TATTCAACGGCCGTGGTTAT+TGG 0.255754 7:-90600509 MsG0780041410.01.T01:three_prime_UTR
GCAATTCCATGTTCAGAGTT+TGG 0.278966 7:-90601959 MsG0780041410.01.T01:CDS
TTTGTTTCCCTTAGGATAAT+AGG 0.291499 7:+90601654 None:intergenic
TGCTTCTGATCGCAAGCTTT+TGG 0.309615 7:-90601776 MsG0780041410.01.T01:CDS
AACTTATTGAATCCATCGTT+TGG 0.315295 7:-90600482 MsG0780041410.01.T01:three_prime_UTR
CCGGTGACAATGGTCCTTGC+AGG 0.320499 7:+90601538 None:intergenic
CGTGCAGCCAACACCGCAAT+AGG 0.321371 7:-90601247 MsG0780041410.01.T01:intron
GAAAGGCTCACAACTGAGTA+TGG 0.336107 7:-90602207 MsG0780041410.01.T01:CDS
CAAACTTCAAGTTGAATTGC+TGG 0.344366 7:+90601875 None:intergenic
CAAGGAACAATGTTGCTTCT+GGG 0.350669 7:+90600888 None:intergenic
GTTTCTGGTGTTGTGCGTTT+TGG 0.351102 7:+90602346 None:intergenic
GCGGCTGCTATATATGCCTT+AGG 0.355297 7:+90602276 None:intergenic
AAAATTGGAGAGCAAATATT+AGG 0.356195 7:-90601738 MsG0780041410.01.T01:CDS
ATCCAGATGGATGGACCATT+TGG 0.359061 7:-90600775 MsG0780041410.01.T01:CDS
ACTGAGTATGGAAAGGAAAA+TGG 0.369677 7:-90602195 MsG0780041410.01.T01:CDS
TCCTTGAAAGATTCACAATT+AGG 0.369726 7:-90600871 MsG0780041410.01.T01:CDS
CGCAACATTGGCACCAGGTC+CGG 0.374959 7:+90600703 None:intergenic
TGCCAAATGGTCCATCCATC+TGG 0.380894 7:+90600773 None:intergenic
AGCCACTGACAATGTCATTA+AGG 0.387743 7:-90602244 MsG0780041410.01.T01:CDS
ATTGTCAGTGGCTGCCTTCA+CGG 0.391542 7:+90602254 None:intergenic
GGACTTGATGCAATTCGCTT+TGG 0.392640 7:-90602145 MsG0780041410.01.T01:CDS
AAGAATGTTAACTGCATCCT+TGG 0.393498 7:+90601576 None:intergenic
ATTCACAATTAGGTCTTACT+TGG 0.400367 7:-90600861 MsG0780041410.01.T01:CDS
ATGATCAAGGATACCCTTCA+TGG 0.403978 7:-90601804 MsG0780041410.01.T01:CDS
CAACCATTCAGCTGCAGACT+TGG 0.404932 7:+90600592 None:intergenic
TGTCTTGGTAACCCACGATA+TGG 0.410992 7:+90601122 None:intergenic
GCAGTTAACATTCTTATGTA+TGG 0.413193 7:-90601568 MsG0780041410.01.T01:CDS
GCCACGGCTTGGTGGCCATC+AGG 0.414038 7:+90601184 None:intergenic
AGGAGATATGTCTGCTTTGG+TGG 0.415074 7:-90601149 MsG0780041410.01.T01:CDS
GAATACTGGTATTGTGATCC+AGG 0.415243 7:-90600924 MsG0780041410.01.T01:CDS
ACCTAATTGTGAATCTTTCA+AGG 0.415959 7:+90600870 None:intergenic
GTTATCACGGTGTCATTAGC+AGG 0.418426 7:-90600661 MsG0780041410.01.T01:CDS
ACTTATTGAATCCATCGTTT+GGG 0.424643 7:-90600481 MsG0780041410.01.T01:three_prime_UTR
TTTGTTGAGTTTGAACCTTA+GGG 0.427369 7:+90602388 None:intergenic
CTGGGATGATATTGCAATCC+TGG 0.428634 7:+90600906 None:intergenic
AATTCCTCATATCAGCAGTT+TGG 0.429155 7:+90602064 None:intergenic
CTTCATGTTCCTCACTACCT+TGG 0.439679 7:-90600563 MsG0780041410.01.T01:CDS
AAATTGGCCGCTACCATCCT+TGG 0.445071 7:+90601699 None:intergenic
CCAAGGAGATATGTCTGCTT+TGG 0.445161 7:-90601152 MsG0780041410.01.T01:CDS
GGTTTGCATGGTCTTGGTAC+CGG 0.445165 7:+90601498 None:intergenic
GGCTTGGTGGCCATCAGGAC+CGG 0.447403 7:+90601189 None:intergenic
ATCCTACAGACAAGCCTGTA+TGG 0.452608 7:-90602025 MsG0780041410.01.T01:CDS
GCAGTCATCAAGAGCCATCT+TGG 0.452748 7:+90602170 None:intergenic
GACACGATGAATTTGAATAC+TGG 0.454064 7:-90600938 MsG0780041410.01.T01:CDS
AACACCGCAATAGGGTTCAT+TGG 0.456316 7:-90601238 MsG0780041410.01.T01:CDS
TTCTAAATGCCACGGCTTGG+TGG 0.458037 7:+90601176 None:intergenic
CGCCGATGTCGCTGACCCTA+AGG 0.458086 7:-90602292 MsG0780041410.01.T01:CDS
GCTTGTACGTTCAAAGCAAC+AGG 0.458208 7:-90601099 MsG0780041410.01.T01:CDS
ACAATCATTGTAAGAAAGCC+TGG 0.458293 7:-90600998 MsG0780041410.01.T01:CDS
TTACAATGATTGTAGAGTGT+TGG 0.460429 7:+90601008 None:intergenic
GTTGTCACTAAGACAATTGT+TGG 0.461578 7:+90602107 None:intergenic
TGCTCTTGCCTATTATCCTA+AGG 0.467731 7:-90601662 MsG0780041410.01.T01:CDS
ATCGTCAAATCCTTCCATAC+AGG 0.470426 7:+90602011 None:intergenic
GGTGGCGGTTTGCATGGTCT+TGG 0.473556 7:+90601492 None:intergenic
GCACAGAGCTAAGAGTTTCA+TGG 0.474837 7:+90602319 None:intergenic
GAGTTTGGACAGCGTACAAA+AGG 0.478187 7:-90601944 MsG0780041410.01.T01:CDS
GTGTTGAATTGCCCTTTGCC+AGG 0.479401 7:+90600980 None:intergenic
AAACTGCTGATATGAGGAAT+TGG 0.480619 7:-90602062 MsG0780041410.01.T01:CDS
ACCATGCAAACCGCCACCTT+CGG 0.488234 7:-90601487 MsG0780041410.01.T01:intron
GGTTTCTAAATGCCACGGCT+TGG 0.489552 7:+90601173 None:intergenic
AAACTAATGTTTCTATTCAA+CGG 0.497755 7:-90600522 MsG0780041410.01.T01:three_prime_UTR
TATCTGCCTTTGTTTCCCTT+AGG 0.503760 7:+90601646 None:intergenic
TACCGCAATTGTCTTGTCTC+TGG 0.505158 7:-90601070 MsG0780041410.01.T01:CDS
CCGTCGTCTTCTTAATTCTG+AGG 0.507152 7:-90601836 MsG0780041410.01.T01:CDS
GTCTTTGCTAAATACTTCCA+TGG 0.507528 7:+90600833 None:intergenic
CTTGACCCTCCTCGCAACAT+TGG 0.507731 7:+90600691 None:intergenic
TTTGAACGTACAAGCTGTCT+TGG 0.509572 7:+90601107 None:intergenic
AATGAACCCTATTGCGGTGT+TGG 0.509945 7:+90601240 None:intergenic
AACATTCTTATGTATGGTGA+TGG 0.510518 7:-90601562 MsG0780041410.01.T01:CDS
GACCCAAGTCTGCAGCTGAA+TGG 0.511381 7:-90600595 MsG0780041410.01.T01:CDS
CTGCAGACTTGGGTCCAGCT+TGG 0.511847 7:+90600603 None:intergenic
TTAAGAAGACGACGGGAAAG+AGG 0.515958 7:+90601844 None:intergenic
ACCGAAGGTGGCGGTTTGCA+TGG 0.516360 7:+90601486 None:intergenic
CGCTGTCCAAACTCTGAACA+TGG 0.516831 7:+90601953 None:intergenic
GGTGATTTCATTCATCCAGA+TGG 0.521680 7:-90600788 MsG0780041410.01.T01:CDS
GGCAGCAAAGTTCTTTCTAC+CGG 0.522781 7:+90601519 None:intergenic
GTGCAGCCAACACCGCAATA+GGG 0.523063 7:-90601246 MsG0780041410.01.T01:intron
GTTGCCCTTGACATTGTGAC+TGG 0.523857 7:-90601913 MsG0780041410.01.T01:CDS
ATGACCAAACTGCTGATATG+AGG 0.525300 7:-90602068 MsG0780041410.01.T01:CDS
AACCATTCAGCTGCAGACTT+GGG 0.528556 7:+90600593 None:intergenic
GCCTAATGTTGTTGTTGCCA+AGG 0.533300 7:-90601716 MsG0780041410.01.T01:CDS
ATTGTAAGAAAGCCTGGCAA+AGG 0.536294 7:-90600992 MsG0780041410.01.T01:CDS
CTCGTTGCAAGTGTTATCAT+CGG 0.537265 7:-90602444 MsG0780041410.01.T01:CDS
CGGCTGCTATATATGCCTTA+GGG 0.537821 7:+90602277 None:intergenic
GAGTATGCCAACACCGGACC+TGG 0.539022 7:-90600716 MsG0780041410.01.T01:CDS
GCTGGTATATTTCTCCAAGC+TGG 0.539392 7:-90600617 MsG0780041410.01.T01:CDS
AAAGGAAAATGGTGCCAAGA+TGG 0.539757 7:-90602184 MsG0780041410.01.T01:CDS
GATTGTAGAGTGTTGGATCA+AGG 0.540089 7:+90601015 None:intergenic
AATGTTGTTGTTGCCAAGGA+TGG 0.540667 7:-90601712 MsG0780041410.01.T01:CDS
TGCGAGGAGGGTCAAGTGGA+AGG 0.542014 7:-90600684 MsG0780041410.01.T01:CDS
ATTTCATTCATCCAGATGGA+TGG 0.544462 7:-90600784 MsG0780041410.01.T01:CDS
TGGTGCCAATGTTGCGAGGA+GGG 0.545598 7:-90600696 MsG0780041410.01.T01:CDS
TCCTTGGTTTCTAAATGCCA+CGG 0.547622 7:+90601168 None:intergenic
CGCAATAGGGTTCATTGGAA+AGG 0.549786 7:-90601233 MsG0780041410.01.T01:CDS
TCCTGATGGCCACCAAGCCG+TGG 0.550551 7:-90601185 MsG0780041410.01.T01:CDS
CTCAGAATTAAGAAGACGAC+GGG 0.552147 7:+90601837 None:intergenic
TCTGCAGCTGAATGGTTGAA+TGG 0.552700 7:-90600587 MsG0780041410.01.T01:CDS
TACAGACAAGCCTGTATGGA+AGG 0.553122 7:-90602021 MsG0780041410.01.T01:CDS
AGAATGTTAACTGCATCCTT+GGG 0.554128 7:+90601577 None:intergenic
CCAAAGCAGACATATCTCCT+TGG 0.554637 7:+90601152 None:intergenic
GATAATAGGCAAGAGCAGCT+TGG 0.556047 7:+90601668 None:intergenic
CACTAAGACAATTGTTGGAG+AGG 0.557234 7:+90602112 None:intergenic
ATCGAATTACGTACCGAAGG+TGG 0.558214 7:+90601474 None:intergenic
TCCTTGGCAACAACAACATT+AGG 0.558760 7:+90601715 None:intergenic
AGGCCTTTAACATGAGTGAA+AGG 0.559687 7:-90602224 MsG0780041410.01.T01:CDS
CTTTCCAATGAACCCTATTG+CGG 0.562819 7:+90601234 None:intergenic
TTGGTGGGTTGCCATATCGT+GGG 0.563011 7:-90601133 MsG0780041410.01.T01:CDS
ATAGGCAAGAGCAGCTTGGA+TGG 0.567189 7:+90601672 None:intergenic
TTGTAAGAAAGCCTGGCAAA+GGG 0.567429 7:-90600991 MsG0780041410.01.T01:CDS
GTCGTCATGGAATCCACCAT+TGG 0.568648 7:-90600809 MsG0780041410.01.T01:CDS
CTCCTCGCAACATTGGCACC+AGG 0.570769 7:+90600698 None:intergenic
TTCAACACAATTACCGCAGA+CGG 0.571606 7:-90600965 MsG0780041410.01.T01:CDS
GAGAACACAGCCGGTCCTGA+TGG 0.573593 7:-90601199 MsG0780041410.01.T01:CDS
TGCCTTAGGGTCAGCGACAT+CGG 0.573914 7:+90602290 None:intergenic
GTTCTTTCTACCGGTGACAA+TGG 0.575082 7:+90601528 None:intergenic
TTTGGTGGGTTGCCATATCG+TGG 0.575585 7:-90601134 MsG0780041410.01.T01:CDS
CGGTGTCATTAGCAGGGTCG+AGG 0.575906 7:-90600654 MsG0780041410.01.T01:CDS
TGCAACGAGAATAAGAGAAA+CGG 0.578673 7:+90602458 None:intergenic
ATATATAGCAGCCGCCGTGA+AGG 0.583057 7:-90602268 MsG0780041410.01.T01:CDS
GGTCTTACTTGGGCAGACCA+TGG 0.585697 7:-90600850 MsG0780041410.01.T01:CDS
TCAGAAGCAGAGATCCATGA+AGG 0.586164 7:+90601790 None:intergenic
GTTGAATTGCTGGAGGATGT+CGG 0.588045 7:+90601885 None:intergenic
TTCACAATTAGGTCTTACTT+GGG 0.588154 7:-90600860 MsG0780041410.01.T01:CDS
GGAGATATGTCTGCTTTGGT+GGG 0.591181 7:-90601148 MsG0780041410.01.T01:CDS
ACAAACCAGTCACAATGTCA+AGG 0.595386 7:+90601908 None:intergenic
GCGAGGAGGGTCAAGTGGAA+GGG 0.598095 7:-90600683 MsG0780041410.01.T01:CDS
GCTCTTGCCTATTATCCTAA+GGG 0.599369 7:-90601661 MsG0780041410.01.T01:CDS
TATTATCCTAAGGGAAACAA+AGG 0.599547 7:-90601652 MsG0780041410.01.T01:CDS
CGAATACATCACTGTACCCA+AGG 0.601219 7:-90601593 MsG0780041410.01.T01:CDS
GAGGCTAACAAATTCACCGC+TGG 0.601385 7:-90600635 MsG0780041410.01.T01:CDS
GATGGCTCTTGATGACTGCA+AGG 0.601614 7:-90602166 MsG0780041410.01.T01:CDS
TTTAGCAAAGACTGTCGTCA+TGG 0.602029 7:-90600822 MsG0780041410.01.T01:CDS
CGGTGACAATGGTCCTTGCA+GGG 0.602179 7:+90601539 None:intergenic
TTTATTATGAACCCAAACGA+TGG 0.604950 7:+90600470 None:intergenic
GGATTTGACGATGCAAATGA+TGG 0.605538 7:-90602000 MsG0780041410.01.T01:CDS
CTGGTGCCAATGTTGCGAGG+AGG 0.607556 7:-90600697 MsG0780041410.01.T01:CDS
GTTGTTGCCAAGGATGGTAG+CGG 0.610721 7:-90601706 MsG0780041410.01.T01:CDS
ATGTTGCGAGGAGGGTCAAG+TGG 0.610852 7:-90600688 MsG0780041410.01.T01:CDS
GCTCACAACTGAGTATGGAA+AGG 0.614832 7:-90602202 MsG0780041410.01.T01:CDS
ATGACATTTGAGAACACAGC+CGG 0.615960 7:-90601208 MsG0780041410.01.T01:CDS
CACAATGTCAAGGGCAACGG+CGG 0.616297 7:+90601918 None:intergenic
CATCGTGTCTGATCCGTCTG+CGG 0.618955 7:+90600952 None:intergenic
ATTGGCACCAGGTCCGGTGT+TGG 0.620218 7:+90600709 None:intergenic
ATGTTTCTATTCAACGGCCG+TGG 0.621077 7:-90600516 MsG0780041410.01.T01:three_prime_UTR
ATGAATGAAATCACCAATGG+TGG 0.621431 7:+90600796 None:intergenic
GAATTACGTACCGAAGGTGG+CGG 0.622230 7:+90601477 None:intergenic
AGTCACAATGTCAAGGGCAA+CGG 0.625537 7:+90601915 None:intergenic
GTCAAGTGGAAGGGTTATCA+CGG 0.626410 7:-90600674 MsG0780041410.01.T01:CDS
ACTTCAAGTTGAATTGCTGG+AGG 0.627546 7:+90601878 None:intergenic
TTCCATACAGGCTTGTCTGT+AGG 0.630229 7:+90602023 None:intergenic
GACCTGGTGCCAATGTTGCG+AGG 0.630608 7:-90600700 MsG0780041410.01.T01:CDS
CCTGCAAGGACCATTGTCAC+CGG 0.633576 7:-90601538 MsG0780041410.01.T01:CDS
GCTTTGAAGCCAAGGTAGTG+AGG 0.634761 7:+90600554 None:intergenic
GGTAGAAAGAACTTTGCTGC+CGG 0.636052 7:-90601517 MsG0780041410.01.T01:CDS
GCCGTGGCATTTAGAAACCA+AGG 0.636208 7:-90601169 MsG0780041410.01.T01:CDS
CAAACCAGTCACAATGTCAA+GGG 0.640366 7:+90601909 None:intergenic
GATGGATGGACCATTTGGCA+AGG 0.645418 7:-90600770 MsG0780041410.01.T01:CDS
GAGGTGACTGTTGATGATCA+AGG 0.646018 7:-90601817 MsG0780041410.01.T01:CDS
GGCCTTAATGACATTGTCAG+TGG 0.647643 7:+90602242 None:intergenic
TTATCACGGTGTCATTAGCA+GGG 0.660828 7:-90600660 MsG0780041410.01.T01:CDS
TGATCCAAAGATGAAATCAA+CGG 0.661341 7:+90601045 None:intergenic
TGTATGGTGATGGCCCTGCA+AGG 0.666778 7:-90601552 MsG0780041410.01.T01:CDS
TATGCAGAGTATGCCAACAC+CGG 0.669068 7:-90600722 MsG0780041410.01.T01:CDS
TAAGTTTATGCCAATAACCA+CGG 0.675084 7:+90600499 None:intergenic
CAGAAGCAGAGATCCATGAA+GGG 0.676064 7:+90601791 None:intergenic
AACGAGAATAAGAGAAACGG+CGG 0.686453 7:+90602461 None:intergenic
GAAACTCTTAGCTCTGTGCG+TGG 0.687088 7:-90602315 MsG0780041410.01.T01:CDS
CCTCAGAATTAAGAAGACGA+CGG 0.690163 7:+90601836 None:intergenic
TGGATGAATGAAATCACCAA+TGG 0.694304 7:+90600793 None:intergenic
TACCAGAGACAAGACAATTG+CGG 0.697140 7:+90601068 None:intergenic
AGCTTGGAGAAATATACCAG+CGG 0.725731 7:+90600619 None:intergenic
GTCAGTGGCTGCCTTCACGG+CGG 0.734265 7:+90602257 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAACTAATGTTTCTATTCAA+CGG - Chr7:90602429-90602448 MsG0780041410.01.T01:CDS 20.0%
! AAAATTGGAGAGCAAATATT+AGG - Chr7:90601213-90601232 MsG0780041410.01.T01:CDS 25.0%
! ATACTCTTTCTTCATTCATA+AGG + Chr7:90601548-90601567 None:intergenic 25.0%
! CTAAAATGCAACGAAAAAAT+TGG - Chr7:90601198-90601217 MsG0780041410.01.T01:CDS 25.0%
!! CAGATATTTTATCTACGTTA+AGG - Chr7:90601322-90601341 MsG0780041410.01.T01:intron 25.0%
AACATTCTTATGTATGGTGA+TGG - Chr7:90601389-90601408 MsG0780041410.01.T01:intron 30.0%
AACTTATTGAATCCATCGTT+TGG - Chr7:90602469-90602488 MsG0780041410.01.T01:CDS 30.0%
ACCTAATTGTGAATCTTTCA+AGG + Chr7:90602084-90602103 None:intergenic 30.0%
ACTTATTGAATCCATCGTTT+GGG - Chr7:90602470-90602489 MsG0780041410.01.T01:CDS 30.0%
ATTAGTAATTTCGATCACAC+TGG + Chr7:90601668-90601687 None:intergenic 30.0%
ATTCACAATTAGGTCTTACT+TGG - Chr7:90602090-90602109 MsG0780041410.01.T01:CDS 30.0%
GCAGTTAACATTCTTATGTA+TGG - Chr7:90601383-90601402 MsG0780041410.01.T01:intron 30.0%
TAAGTTTATGCCAATAACCA+CGG + Chr7:90602455-90602474 None:intergenic 30.0%
TATTATCCTAAGGGAAACAA+AGG - Chr7:90601299-90601318 MsG0780041410.01.T01:intron 30.0%
TCCTTGAAAGATTCACAATT+AGG - Chr7:90602080-90602099 MsG0780041410.01.T01:CDS 30.0%
TGATCCAAAGATGAAATCAA+CGG + Chr7:90601909-90601928 None:intergenic 30.0%
TTACAATGATTGTAGAGTGT+TGG + Chr7:90601946-90601965 None:intergenic 30.0%
TTCACAATTAGGTCTTACTT+GGG - Chr7:90602091-90602110 MsG0780041410.01.T01:CDS 30.0%
TTTATTATGAACCCAAACGA+TGG + Chr7:90602484-90602503 None:intergenic 30.0%
TTTGTTGAGTTTGAACCTTA+GGG + Chr7:90600566-90600585 None:intergenic 30.0%
TTTGTTTCCCTTAGGATAAT+AGG + Chr7:90601300-90601319 None:intergenic 30.0%
! TATTTTATCTACGTTAAGGC+TGG - Chr7:90601326-90601345 MsG0780041410.01.T01:intron 30.0%
AAACTGCTGATATGAGGAAT+TGG - Chr7:90600889-90600908 MsG0780041410.01.T01:CDS 35.0%
AAGAATGTTAACTGCATCCT+TGG + Chr7:90601378-90601397 None:intergenic 35.0%
AATTCCTCATATCAGCAGTT+TGG + Chr7:90600890-90600909 None:intergenic 35.0%
ACAATCATTGTAAGAAAGCC+TGG - Chr7:90601953-90601972 MsG0780041410.01.T01:CDS 35.0%
ACTGAGTATGGAAAGGAAAA+TGG - Chr7:90600756-90600775 MsG0780041410.01.T01:CDS 35.0%
AGAATGTTAACTGCATCCTT+GGG + Chr7:90601377-90601396 None:intergenic 35.0%
ATAATCGAATTACGTACCGA+AGG + Chr7:90601483-90601502 None:intergenic 35.0%
ATGAATGAAATCACCAATGG+TGG + Chr7:90602158-90602177 None:intergenic 35.0%
ATTTCATTCATCCAGATGGA+TGG - Chr7:90602167-90602186 MsG0780041410.01.T01:CDS 35.0%
CAAAAATGGTAAAGACCCTA+AGG - Chr7:90600548-90600567 MsG0780041410.01.T01:exon 35.0%
CTTTGTTGAGTTTGAACCTT+AGG + Chr7:90600567-90600586 None:intergenic 35.0%
GACACGATGAATTTGAATAC+TGG - Chr7:90602013-90602032 MsG0780041410.01.T01:CDS 35.0%
GTCTTTGCTAAATACTTCCA+TGG + Chr7:90602121-90602140 None:intergenic 35.0%
GTTGTCACTAAGACAATTGT+TGG + Chr7:90600847-90600866 None:intergenic 35.0%
TGCAACGAGAATAAGAGAAA+CGG + Chr7:90600496-90600515 None:intergenic 35.0%
TGGATGAATGAAATCACCAA+TGG + Chr7:90602161-90602180 None:intergenic 35.0%
! ATTTTGTTCTCCTTGCCAAA+TGG + Chr7:90602194-90602213 None:intergenic 35.0%
!! CAAACTTCAAGTTGAATTGC+TGG + Chr7:90601079-90601098 None:intergenic 35.0%
!!! ATTTTCAAGCTTTGAAGCCA+AGG + Chr7:90602408-90602427 None:intergenic 35.0%
!!! CAGCTTGGATGGTTTTAAAT+TGG + Chr7:90601271-90601290 None:intergenic 35.0%
AACGAGAATAAGAGAAACGG+CGG + Chr7:90600493-90600512 None:intergenic 40.0%
ACAAACCAGTCACAATGTCA+AGG + Chr7:90601046-90601065 None:intergenic 40.0%
AGCCACTGACAATGTCATTA+AGG - Chr7:90600707-90600726 MsG0780041410.01.T01:CDS 40.0%
AGCTTGGAGAAATATACCAG+CGG + Chr7:90602335-90602354 None:intergenic 40.0%
AGGCCTTTAACATGAGTGAA+AGG - Chr7:90600727-90600746 MsG0780041410.01.T01:CDS 40.0%
ATCGTCAAATCCTTCCATAC+AGG + Chr7:90600943-90600962 None:intergenic 40.0%
ATGACATTTGAGAACACAGC+CGG - Chr7:90601743-90601762 MsG0780041410.01.T01:CDS 40.0%
ATGACCAAACTGCTGATATG+AGG - Chr7:90600883-90600902 MsG0780041410.01.T01:CDS 40.0%
ATGATCAAGGATACCCTTCA+TGG - Chr7:90601147-90601166 MsG0780041410.01.T01:CDS 40.0%
ATTGTAAGAAAGCCTGGCAA+AGG - Chr7:90601959-90601978 MsG0780041410.01.T01:CDS 40.0%
CAAACCAGTCACAATGTCAA+GGG + Chr7:90601045-90601064 None:intergenic 40.0%
CACTAAGACAATTGTTGGAG+AGG + Chr7:90600842-90600861 None:intergenic 40.0%
CCTCAGAATTAAGAAGACGA+CGG + Chr7:90601118-90601137 None:intergenic 40.0%
CTCAGAATTAAGAAGACGAC+GGG + Chr7:90601117-90601136 None:intergenic 40.0%
CTCGTTGCAAGTGTTATCAT+CGG - Chr7:90600507-90600526 MsG0780041410.01.T01:three_prime_UTR 40.0%
CTTTCCAATGAACCCTATTG+CGG + Chr7:90601720-90601739 None:intergenic 40.0%
GAATACTGGTATTGTGATCC+AGG - Chr7:90602027-90602046 MsG0780041410.01.T01:CDS 40.0%
GAGCCTTTCACTCATGTTAA+AGG + Chr7:90600733-90600752 None:intergenic 40.0%
GCAATTCCATGTTCAGAGTT+TGG - Chr7:90600992-90601011 MsG0780041410.01.T01:CDS 40.0%
GCTCTTGCCTATTATCCTAA+GGG - Chr7:90601290-90601309 MsG0780041410.01.T01:intron 40.0%
GGATTTGACGATGCAAATGA+TGG - Chr7:90600951-90600970 MsG0780041410.01.T01:CDS 40.0%
GGTGATTTCATTCATCCAGA+TGG - Chr7:90602163-90602182 MsG0780041410.01.T01:CDS 40.0%
GTTGTCGACATTCGCAAAAA+TGG - Chr7:90600534-90600553 MsG0780041410.01.T01:exon 40.0%
TACCAGAGACAAGACAATTG+CGG + Chr7:90601886-90601905 None:intergenic 40.0%
TCCTTGGCAACAACAACATT+AGG + Chr7:90601239-90601258 None:intergenic 40.0%
TCCTTGGTTTCTAAATGCCA+CGG + Chr7:90601786-90601805 None:intergenic 40.0%
TGCTCTTGCCTATTATCCTA+AGG - Chr7:90601289-90601308 MsG0780041410.01.T01:intron 40.0%
TTCAACACAATTACCGCAGA+CGG - Chr7:90601986-90602005 MsG0780041410.01.T01:CDS 40.0%
TTGTAAGAAAGCCTGGCAAA+GGG - Chr7:90601960-90601979 MsG0780041410.01.T01:CDS 40.0%
TTTAGCAAAGACTGTCGTCA+TGG - Chr7:90602129-90602148 MsG0780041410.01.T01:CDS 40.0%
TTTGAACGTACAAGCTGTCT+TGG + Chr7:90601847-90601866 None:intergenic 40.0%
! AAAGGAAAATGGTGCCAAGA+TGG - Chr7:90600767-90600786 MsG0780041410.01.T01:CDS 40.0%
! AATGTTGTTGTTGCCAAGGA+TGG - Chr7:90601239-90601258 MsG0780041410.01.T01:CDS 40.0%
! CAAGGAACAATGTTGCTTCT+GGG + Chr7:90602066-90602085 None:intergenic 40.0%
! TATCTGCCTTTGTTTCCCTT+AGG + Chr7:90601308-90601327 None:intergenic 40.0%
! TCAAGGAACAATGTTGCTTC+TGG + Chr7:90602067-90602086 None:intergenic 40.0%
!! ACTTCAAGTTGAATTGCTGG+AGG + Chr7:90601076-90601095 None:intergenic 40.0%
!! GATTGTAGAGTGTTGGATCA+AGG + Chr7:90601939-90601958 None:intergenic 40.0%
!! GGTACCGTTGATTTCATCTT+TGG - Chr7:90601902-90601921 MsG0780041410.01.T01:CDS 40.0%
!! TTATCACGGTGTCATTAGCA+GGG - Chr7:90602291-90602310 MsG0780041410.01.T01:CDS 40.0%
AACACCGCAATAGGGTTCAT+TGG - Chr7:90601713-90601732 MsG0780041410.01.T01:CDS 45.0%
AACCATTCAGCTGCAGACTT+GGG + Chr7:90602361-90602380 None:intergenic 45.0%
AATGAACCCTATTGCGGTGT+TGG + Chr7:90601714-90601733 None:intergenic 45.0%
AGGAGATATGTCTGCTTTGG+TGG - Chr7:90601802-90601821 MsG0780041410.01.T01:CDS 45.0%
AGTCACAATGTCAAGGGCAA+CGG + Chr7:90601039-90601058 None:intergenic 45.0%
ATCCAGATGGATGGACCATT+TGG - Chr7:90602176-90602195 MsG0780041410.01.T01:CDS 45.0%
ATCCTACAGACAAGCCTGTA+TGG - Chr7:90600926-90600945 MsG0780041410.01.T01:CDS 45.0%
ATCGAATTACGTACCGAAGG+TGG + Chr7:90601480-90601499 None:intergenic 45.0%
CAGAAGCAGAGATCCATGAA+GGG + Chr7:90601163-90601182 None:intergenic 45.0%
CCAAAGCAGACATATCTCCT+TGG + Chr7:90601802-90601821 None:intergenic 45.0%
CCAAGGAGATATGTCTGCTT+TGG - Chr7:90601799-90601818 MsG0780041410.01.T01:CDS 45.0%
CCGTCGTCTTCTTAATTCTG+AGG - Chr7:90601115-90601134 MsG0780041410.01.T01:CDS 45.0%
CGAATACATCACTGTACCCA+AGG - Chr7:90601358-90601377 MsG0780041410.01.T01:intron 45.0%
CGCAATAGGGTTCATTGGAA+AGG - Chr7:90601718-90601737 MsG0780041410.01.T01:CDS 45.0%
CGGCTGCTATATATGCCTTA+GGG + Chr7:90600677-90600696 None:intergenic 45.0%
CTGGGATGATATTGCAATCC+TGG + Chr7:90602048-90602067 None:intergenic 45.0%
CTTCATGTTCCTCACTACCT+TGG - Chr7:90602388-90602407 MsG0780041410.01.T01:CDS 45.0%
GAAAGGCTCACAACTGAGTA+TGG - Chr7:90600744-90600763 MsG0780041410.01.T01:CDS 45.0%
GAGTTTCATGGCAGAGTTTC+TGG + Chr7:90600623-90600642 None:intergenic 45.0%
GAGTTTGGACAGCGTACAAA+AGG - Chr7:90601007-90601026 MsG0780041410.01.T01:CDS 45.0%
GATAATAGGCAAGAGCAGCT+TGG + Chr7:90601286-90601305 None:intergenic 45.0%
GCACAGAGCTAAGAGTTTCA+TGG + Chr7:90600635-90600654 None:intergenic 45.0%
GCTCACAACTGAGTATGGAA+AGG - Chr7:90600749-90600768 MsG0780041410.01.T01:CDS 45.0%
GCTGGTATATTTCTCCAAGC+TGG - Chr7:90602334-90602353 MsG0780041410.01.T01:CDS 45.0%
GCTTGTACGTTCAAAGCAAC+AGG - Chr7:90601852-90601871 MsG0780041410.01.T01:CDS 45.0%
GGACTTGATGCAATTCGCTT+TGG - Chr7:90600806-90600825 MsG0780041410.01.T01:CDS 45.0%
GGAGATATGTCTGCTTTGGT+GGG - Chr7:90601803-90601822 MsG0780041410.01.T01:CDS 45.0%
GGCAGCAAAGTTCTTTCTAC+CGG + Chr7:90601435-90601454 None:intergenic 45.0%
GGCCTTAATGACATTGTCAG+TGG + Chr7:90600712-90600731 None:intergenic 45.0%
GGTAGAAAGAACTTTGCTGC+CGG - Chr7:90601434-90601453 MsG0780041410.01.T01:intron 45.0%
GTCAAGTGGAAGGGTTATCA+CGG - Chr7:90602277-90602296 MsG0780041410.01.T01:CDS 45.0%
GTTCTTTCTACCGGTGACAA+TGG + Chr7:90601426-90601445 None:intergenic 45.0%
GTTGAATTGCTGGAGGATGT+CGG + Chr7:90601069-90601088 None:intergenic 45.0%
TACAGACAAGCCTGTATGGA+AGG - Chr7:90600930-90600949 MsG0780041410.01.T01:CDS 45.0%
TACCGCAATTGTCTTGTCTC+TGG - Chr7:90601881-90601900 MsG0780041410.01.T01:CDS 45.0%
TATGCAGAGTATGCCAACAC+CGG - Chr7:90602229-90602248 MsG0780041410.01.T01:CDS 45.0%
TATTCAACGGCCGTGGTTAT+TGG - Chr7:90602442-90602461 MsG0780041410.01.T01:CDS 45.0%
TCAGAAGCAGAGATCCATGA+AGG + Chr7:90601164-90601183 None:intergenic 45.0%
TCTGCAGCTGAATGGTTGAA+TGG - Chr7:90602364-90602383 MsG0780041410.01.T01:CDS 45.0%
TTAAGAAGACGACGGGAAAG+AGG + Chr7:90601110-90601129 None:intergenic 45.0%
TTCCATACAGGCTTGTCTGT+AGG + Chr7:90600931-90600950 None:intergenic 45.0%
! ATGTTTCTATTCAACGGCCG+TGG - Chr7:90602435-90602454 MsG0780041410.01.T01:CDS 45.0%
! GCCTAATGTTGTTGTTGCCA+AGG - Chr7:90601235-90601254 MsG0780041410.01.T01:CDS 45.0%
! TGCTTCTGATCGCAAGCTTT+TGG - Chr7:90601175-90601194 MsG0780041410.01.T01:CDS 45.0%
! TGTCTTGGTAACCCACGATA+TGG + Chr7:90601832-90601851 None:intergenic 45.0%
!! GAGGTGACTGTTGATGATCA+AGG - Chr7:90601134-90601153 MsG0780041410.01.T01:CDS 45.0%
!! GTTATCACGGTGTCATTAGC+AGG - Chr7:90602290-90602309 MsG0780041410.01.T01:CDS 45.0%
!!! GTTTCTGGTGTTGTGCGTTT+TGG + Chr7:90600608-90600627 None:intergenic 45.0%
AAATTGGCCGCTACCATCCT+TGG + Chr7:90601255-90601274 None:intergenic 50.0%
ATAGGCAAGAGCAGCTTGGA+TGG + Chr7:90601282-90601301 None:intergenic 50.0%
ATATATAGCAGCCGCCGTGA+AGG - Chr7:90600683-90600702 MsG0780041410.01.T01:CDS 50.0%
ATTGTCAGTGGCTGCCTTCA+CGG + Chr7:90600700-90600719 None:intergenic 50.0%
CAACCATTCAGCTGCAGACT+TGG + Chr7:90602362-90602381 None:intergenic 50.0%
CGCTGTCCAAACTCTGAACA+TGG + Chr7:90601001-90601020 None:intergenic 50.0%
GAATTACGTACCGAAGGTGG+CGG + Chr7:90601477-90601496 None:intergenic 50.0%
GAGGCTAACAAATTCACCGC+TGG - Chr7:90602316-90602335 MsG0780041410.01.T01:CDS 50.0%
GATGGATGGACCATTTGGCA+AGG - Chr7:90602181-90602200 MsG0780041410.01.T01:CDS 50.0%
GCAGTCATCAAGAGCCATCT+TGG + Chr7:90600784-90600803 None:intergenic 50.0%
GCCGTGGCATTTAGAAACCA+AGG - Chr7:90601782-90601801 MsG0780041410.01.T01:CDS 50.0%
GCGGCTGCTATATATGCCTT+AGG + Chr7:90600678-90600697 None:intergenic 50.0%
GGTTTCTAAATGCCACGGCT+TGG + Chr7:90601781-90601800 None:intergenic 50.0%
GTCGTCATGGAATCCACCAT+TGG - Chr7:90602142-90602161 MsG0780041410.01.T01:CDS 50.0%
GTGTTGAATTGCCCTTTGCC+AGG + Chr7:90601974-90601993 None:intergenic 50.0%
GTTGCCCTTGACATTGTGAC+TGG - Chr7:90601038-90601057 MsG0780041410.01.T01:CDS 50.0%
GTTGTTGCCAAGGATGGTAG+CGG - Chr7:90601245-90601264 MsG0780041410.01.T01:intron 50.0%
TGCCAAATGGTCCATCCATC+TGG + Chr7:90602181-90602200 None:intergenic 50.0%
! GATGGCTCTTGATGACTGCA+AGG - Chr7:90600785-90600804 MsG0780041410.01.T01:CDS 50.0%
! GGTTTGCATGGTCTTGGTAC+CGG + Chr7:90601456-90601475 None:intergenic 50.0%
! TTCTAAATGCCACGGCTTGG+TGG + Chr7:90601778-90601797 None:intergenic 50.0%
!! GAAACTCTTAGCTCTGTGCG+TGG - Chr7:90600636-90600655 MsG0780041410.01.T01:CDS 50.0%
!! GCTTTGAAGCCAAGGTAGTG+AGG + Chr7:90602400-90602419 None:intergenic 50.0%
!! TTGGTGGGTTGCCATATCGT+GGG - Chr7:90601818-90601837 MsG0780041410.01.T01:CDS 50.0%
!! TTTGGTGGGTTGCCATATCG+TGG - Chr7:90601817-90601836 MsG0780041410.01.T01:CDS 50.0%
ACCATGCAAACCGCCACCTT+CGG - Chr7:90601464-90601483 MsG0780041410.01.T01:intron 55.0%
ATGTTGCGAGGAGGGTCAAG+TGG - Chr7:90602263-90602282 MsG0780041410.01.T01:CDS 55.0%
CACAATGTCAAGGGCAACGG+CGG + Chr7:90601036-90601055 None:intergenic 55.0%
CATCGTGTCTGATCCGTCTG+CGG + Chr7:90602002-90602021 None:intergenic 55.0%
CCTGCAAGGACCATTGTCAC+CGG - Chr7:90601413-90601432 MsG0780041410.01.T01:intron 55.0%
CGGTGACAATGGTCCTTGCA+GGG + Chr7:90601415-90601434 None:intergenic 55.0%
CTTGACCCTCCTCGCAACAT+TGG + Chr7:90602263-90602282 None:intergenic 55.0%
GACCCAAGTCTGCAGCTGAA+TGG - Chr7:90602356-90602375 MsG0780041410.01.T01:CDS 55.0%
GGTCTTACTTGGGCAGACCA+TGG - Chr7:90602101-90602120 MsG0780041410.01.T01:CDS 55.0%
GTGCAGCCAACACCGCAATA+GGG - Chr7:90601705-90601724 MsG0780041410.01.T01:CDS 55.0%
TGCCTTAGGGTCAGCGACAT+CGG + Chr7:90600664-90600683 None:intergenic 55.0%
! TGGTGCCAATGTTGCGAGGA+GGG - Chr7:90602255-90602274 MsG0780041410.01.T01:CDS 55.0%
!! TGTATGGTGATGGCCCTGCA+AGG - Chr7:90601399-90601418 MsG0780041410.01.T01:intron 55.0%
ATTGGCACCAGGTCCGGTGT+TGG + Chr7:90602245-90602264 None:intergenic 60.0%
CCGGTGACAATGGTCCTTGC+AGG + Chr7:90601416-90601435 None:intergenic 60.0%
CGCAACATTGGCACCAGGTC+CGG + Chr7:90602251-90602270 None:intergenic 60.0%
CGTGCAGCCAACACCGCAAT+AGG - Chr7:90601704-90601723 MsG0780041410.01.T01:CDS 60.0%
CTCCTCGCAACATTGGCACC+AGG + Chr7:90602256-90602275 None:intergenic 60.0%
CTGCAGACTTGGGTCCAGCT+TGG + Chr7:90602351-90602370 None:intergenic 60.0%
GAGAACACAGCCGGTCCTGA+TGG - Chr7:90601752-90601771 MsG0780041410.01.T01:CDS 60.0%
GAGTATGCCAACACCGGACC+TGG - Chr7:90602235-90602254 MsG0780041410.01.T01:CDS 60.0%
GCGAGGAGGGTCAAGTGGAA+GGG - Chr7:90602268-90602287 MsG0780041410.01.T01:CDS 60.0%
TGCGAGGAGGGTCAAGTGGA+AGG - Chr7:90602267-90602286 MsG0780041410.01.T01:CDS 60.0%
! ACCGAAGGTGGCGGTTTGCA+TGG + Chr7:90601468-90601487 None:intergenic 60.0%
! CTGGTGCCAATGTTGCGAGG+AGG - Chr7:90602254-90602273 MsG0780041410.01.T01:CDS 60.0%
! GACCTGGTGCCAATGTTGCG+AGG - Chr7:90602251-90602270 MsG0780041410.01.T01:CDS 60.0%
! GGTGGCGGTTTGCATGGTCT+TGG + Chr7:90601462-90601481 None:intergenic 60.0%
!! CGGTGTCATTAGCAGGGTCG+AGG - Chr7:90602297-90602316 MsG0780041410.01.T01:CDS 60.0%
CGCCGATGTCGCTGACCCTA+AGG - Chr7:90600659-90600678 MsG0780041410.01.T01:CDS 65.0%
GTCAGTGGCTGCCTTCACGG+CGG + Chr7:90600697-90600716 None:intergenic 65.0%
TCCTGATGGCCACCAAGCCG+TGG - Chr7:90601766-90601785 MsG0780041410.01.T01:CDS 65.0%
!! GGCTTGGTGGCCATCAGGAC+CGG + Chr7:90601765-90601784 None:intergenic 65.0%
!! TGCGGTGTTGGCTGCACGCA+TGG + Chr7:90601702-90601721 None:intergenic 65.0%
!! GCCACGGCTTGGTGGCCATC+AGG + Chr7:90601770-90601789 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 90600468 90602505 90600468 ID=MsG0780041410.01;Name=MsG0780041410.01
Chr7 mRNA 90600468 90602505 90600468 ID=MsG0780041410.01.T01;Parent=MsG0780041410.01;Name=MsG0780041410.01.T01;_AED=0.48;_eAED=0.48;_QI=0|0|0.5|1|1|1|2|82|576
Chr7 exon 90600468 90601262 90600468 ID=MsG0780041410.01.T01:exon:20895;Parent=MsG0780041410.01.T01
Chr7 exon 90601488 90602505 90601488 ID=MsG0780041410.01.T01:exon:20894;Parent=MsG0780041410.01.T01
Chr7 CDS 90601488 90602505 90601488 ID=MsG0780041410.01.T01:cds;Parent=MsG0780041410.01.T01
Chr7 CDS 90600550 90601262 90600550 ID=MsG0780041410.01.T01:cds;Parent=MsG0780041410.01.T01
Chr7 three_prime_UTR 90600468 90600549 90600468 ID=MsG0780041410.01.T01:three_prime_utr;Parent=MsG0780041410.01.T01
Gene Sequence

>MsG0780041410.01.T01

ATGAAGGGAAAGGTAATTATCTCCGCCGTTTCTCTTATTCTCGTTGCAAGTGTTATCATCGGTGTTGTTGTCGACATTCGCAAAAATGGTAAAGACCCTAAGGTTCAAACTCAACAAAGAAATCTTAGAATTATGTGCCAAAACGCACAACACCAGAAACTCTGCCATGAAACTCTTAGCTCTGTGCGTGGCGCCGATGTCGCTGACCCTAAGGCATATATAGCAGCCGCCGTGAAGGCAGCCACTGACAATGTCATTAAGGCCTTTAACATGAGTGAAAGGCTCACAACTGAGTATGGAAAGGAAAATGGTGCCAAGATGGCTCTTGATGACTGCAAGGACTTGATGCAATTCGCTTTGGACAGTCTTGACCTCTCCAACAATTGTCTTAGTGACAACAACATTCAAGCTGTTCATGACCAAACTGCTGATATGAGGAATTGGTTGAGTGCAGTTATATCCTACAGACAAGCCTGTATGGAAGGATTTGACGATGCAAATGATGGTGAGAAGAAAATCAAAGAGCAATTCCATGTTCAGAGTTTGGACAGCGTACAAAAGGTCACCGCCGTTGCCCTTGACATTGTGACTGGTTTGTCCGACATCCTCCAGCAATTCAACTTGAAGTTTGATATCAAACCTCTTTCCCGTCGTCTTCTTAATTCTGAGGTGACTGTTGATGATCAAGGATACCCTTCATGGATCTCTGCTTCTGATCGCAAGCTTTTGGCTAAAATGCAACGAAAAAATTGGAGAGCAAATATTAGGCCTAATGTTGTTGTTGCCAAGGATGGTAGCGGCCAATTTAAAACCATCCAAGCTGCTCTTGCCTATTATCCTAAGGGAAACAAAGGCAGATATTTTATCTACGTTAAGGCTGGTGTCTATGACGAATACATCACTGTACCCAAGGATGCAGTTAACATTCTTATGTATGGTGATGGCCCTGCAAGGACCATTGTCACCGGTAGAAAGAACTTTGCTGCCGGTACCAAGACCATGCAAACCGCCACCTTCGCCAACACCGCAATAGGGTTCATTGGAAAGGCAATGACATTTGAGAACACAGCCGGTCCTGATGGCCACCAAGCCGTGGCATTTAGAAACCAAGGAGATATGTCTGCTTTGGTGGGTTGCCATATCGTGGGTTACCAAGACAGCTTGTACGTTCAAAGCAACAGGCAGTACTACCGCAATTGTCTTGTCTCTGGTACCGTTGATTTCATCTTTGGATCATCTGCTACCTTGATCCAACACTCTACAATCATTGTAAGAAAGCCTGGCAAAGGGCAATTCAACACAATTACCGCAGACGGATCAGACACGATGAATTTGAATACTGGTATTGTGATCCAGGATTGCAATATCATCCCAGAAGCAACATTGTTCCTTGAAAGATTCACAATTAGGTCTTACTTGGGCAGACCATGGAAGTATTTAGCAAAGACTGTCGTCATGGAATCCACCATTGGTGATTTCATTCATCCAGATGGATGGACCATTTGGCAAGGAGAACAAAATCACAACACATGTTACTATGCAGAGTATGCCAACACCGGACCTGGTGCCAATGTTGCGAGGAGGGTCAAGTGGAAGGGTTATCACGGTGTCATTAGCAGGGTCGAGGCTAACAAATTCACCGCTGGTATATTTCTCCAAGCTGGACCCAAGTCTGCAGCTGAATGGTTGAATGGTCTTCATGTTCCTCACTACCTTGGCTTCAAAGCTTGA
Protein sequence

>MsG0780041410.01.T01

MKGKVIISAVSLILVASVIIGVVVDIRKNGKDPKVQTQQRNLRIMCQNAQHQKLCHETLSSVRGADVADPKAYIAAAVKAATDNVIKAFNMSERLTTEYGKENGAKMALDDCKDLMQFALDSLDLSNNCLSDNNIQAVHDQTADMRNWLSAVISYRQACMEGFDDANDGEKKIKEQFHVQSLDSVQKVTAVALDIVTGLSDILQQFNLKFDIKPLSRRLLNSEVTVDDQGYPSWISASDRKLLAKMQRKNWRANIRPNVVVAKDGSGQFKTIQAALAYYPKGNKGRYFIYVKAGVYDEYITVPKDAVNILMYGDGPARTIVTGRKNFAAGTKTMQTATFANTAIGFIGKAMTFENTAGPDGHQAVAFRNQGDMSALVGCHIVGYQDSLYVQSNRQYYRNCLVSGTVDFIFGSSATLIQHSTIIVRKPGKGQFNTITADGSDTMNLNTGIVIQDCNIIPEATLFLERFTIRSYLGRPWKYLAKTVVMESTIGDFIHPDGWTIWQGEQNHNTCYYAEYANTGPGANVARRVKWKGYHGVISRVEANKFTAGIFLQAGPKSAAEWLNGLHVPHYLGFKA*