AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041465.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041465.01.T01 MTR_7g111650 84.821 672 26 3 1 596 34 705 0.0 1142
MsG0780041465.01.T01 MTR_7g111650 83.185 672 26 4 1 596 34 694 0.0 1112
MsG0780041465.01.T01 MTR_7g111650 81.447 539 24 3 134 596 1 539 0.0 872
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041465.01.T01 AT3G04480 50.301 664 237 7 1 591 34 677 0.0 628

Find 123 sgRNAs with CRISPR-Local

Find 327 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCAAAGACATCATGTTAT+TGG 0.176771 7:-91247460 MsG0780041465.01.T01:CDS
CAACTAGCAGCGTTTGATTT+TGG 0.194281 7:-91249496 MsG0780041465.01.T01:CDS
TTCAAAGACATCATGTTATT+GGG 0.232969 7:-91247459 MsG0780041465.01.T01:CDS
AACTGCTCCATTCGTGATTT+AGG 0.239376 7:+91247275 None:intergenic
AACAAGGACATAAAGGAATA+TGG 0.243697 7:+91248122 None:intergenic
ATCTTGAGCTTGGTTATAAA+AGG 0.259616 7:-91251624 MsG0780041465.01.T01:CDS
ACTTCACATGGCTGGTCAAC+TGG 0.264296 7:-91248400 MsG0780041465.01.T01:CDS
TTGTTTCTTTGGCGTACTTA+TGG 0.266450 7:-91251456 MsG0780041465.01.T01:CDS
TATAATGGCACATAGCTTTC+CGG 0.268584 7:+91247385 None:intergenic
TCTTTACCCAAGTGCTTTGC+AGG 0.282813 7:+91250481 None:intergenic
ACTGACATTTGAAGGCTTAC+TGG 0.289935 7:+91246533 None:intergenic
GAGGTTAGGTCTTGTTTCTT+TGG 0.294199 7:-91251467 MsG0780041465.01.T01:CDS
GTAGAGCATATGTGAAGTTT+TGG 0.319272 7:-91249315 MsG0780041465.01.T01:CDS
TTTCTTTATAGCAGATTTGC+AGG 0.320922 7:-91249554 MsG0780041465.01.T01:intron
TCTGTTACTGCTGTGTGTTC+TGG 0.321993 7:-91251538 MsG0780041465.01.T01:CDS
AATGAAGATAGCTGAATTAC+AGG 0.323338 7:-91248172 MsG0780041465.01.T01:CDS
CTCATGTCATGCAGAGTTTG+AGG 0.332427 7:-91246565 MsG0780041465.01.T01:intron
CTTTGCCTGGGAAGATATAA+TGG 0.342710 7:-91247204 MsG0780041465.01.T01:intron
CATCAAATATGCTGAATGTA+TGG 0.345363 7:-91251689 MsG0780041465.01.T01:CDS
CAAGGTAGCTGCCATGGGTT+TGG 0.353464 7:-91250506 MsG0780041465.01.T01:intron
TTATGTTCTACGACATCAAT+TGG 0.356178 7:+91249729 None:intergenic
ATTGTCAATCACAAGTGTTC+TGG 0.360796 7:-91247363 MsG0780041465.01.T01:CDS
GAGATTTCTATGCAGAATTT+GGG 0.361430 7:-91249822 MsG0780041465.01.T01:intron
CTTCGAGATGGTACGCCAAA+TGG 0.371534 7:+91249373 None:intergenic
TGGAGGCCCTGGGGTTGAAC+TGG 0.371864 7:-91248346 MsG0780041465.01.T01:CDS
GAAAGTGTTTGTTCGAGGTT+AGG 0.378559 7:-91251481 MsG0780041465.01.T01:CDS
GTATGGGATTGCCATTGTTC+AGG 0.384335 7:-91251672 MsG0780041465.01.T01:CDS
ACTTGTGATTGACAATATAA+TGG 0.390583 7:+91247370 None:intergenic
TAATAGATAACGACTTTGCC+TGG 0.391497 7:-91247217 MsG0780041465.01.T01:CDS
ATCTTTGCAGTGGAGGCCCT+GGG 0.393414 7:-91248356 MsG0780041465.01.T01:CDS
TTTCAGAAATGTGTGATTCC+CGG 0.397759 7:-91247404 MsG0780041465.01.T01:CDS
ATAATGGCACATAGCTTTCC+GGG 0.398283 7:+91247386 None:intergenic
CCCTGGGGTTGAACTGGAAC+AGG 0.404068 7:-91248340 MsG0780041465.01.T01:CDS
CTGACATTTGAAGGCTTACT+GGG 0.405556 7:+91246534 None:intergenic
ATCCTTGCTCCTCAATGAAA+TGG 0.408402 7:-91251422 MsG0780041465.01.T01:intron
ACACATTCTCCATGTGTTGC+TGG 0.414372 7:-91249677 MsG0780041465.01.T01:CDS
TTGTTCCTGATCTACCAAAA+AGG 0.423514 7:-91248104 MsG0780041465.01.T01:intron
GCCTGTTCCAGTTCAACCCC+AGG 0.425806 7:+91248339 None:intergenic
TCAGCTCCACTGACATTTGA+AGG 0.427589 7:+91246525 None:intergenic
GGAATAAATGTTTGCGGAGA+AGG 0.429128 7:-91250287 MsG0780041465.01.T01:CDS
ACACAGGAGAGGTGCCCATT+TGG 0.429574 7:-91249388 MsG0780041465.01.T01:CDS
GATCAGGAACAAGGACATAA+AGG 0.430601 7:+91248115 None:intergenic
GCCTCCACTGCAAAGATTCA+TGG 0.441436 7:+91248362 None:intergenic
GGTCTTGACCAGATTGCAAA+TGG 0.443668 7:-91250937 MsG0780041465.01.T01:intron
AATCTTTGCAGTGGAGGCCC+TGG 0.461556 7:-91248357 MsG0780041465.01.T01:CDS
TGAACAAGATCTTTCCATGA+TGG 0.463618 7:+91247478 None:intergenic
TTTGGATCCTGCAAAGCACT+TGG 0.464980 7:-91250488 MsG0780041465.01.T01:CDS
GTGTCGAAAGTGTTTGTTCG+AGG 0.469835 7:-91251486 MsG0780041465.01.T01:CDS
AGCTACATGTATCAAACTGT+TGG 0.472858 7:-91251724 MsG0780041465.01.T01:CDS
CTTCACATGGCTGGTCAACT+GGG 0.476586 7:-91248399 MsG0780041465.01.T01:CDS
TTGTTCAGGAGGAGAATTCA+AGG 0.480152 7:-91251658 MsG0780041465.01.T01:CDS
TTATCAGTAGGCAAAGAATC+AGG 0.480646 7:+91247326 None:intergenic
TGAAATGCCTCTACTTGAGA+TGG 0.485639 7:-91249344 MsG0780041465.01.T01:CDS
TCATCAAAGCATCTTGAGCT+TGG 0.488713 7:-91251634 MsG0780041465.01.T01:CDS
ACCATCCTCGACATAAAGAA+TGG 0.489983 7:+91247520 None:intergenic
TTCGAGATGGTACGCCAAAT+GGG 0.497265 7:+91249374 None:intergenic
ATTTCACAAGGTAGCTGCCA+TGG 0.497566 7:-91250512 MsG0780041465.01.T01:intron
ACAGGAACTATGTTGAAGAT+TGG 0.500598 7:+91246432 None:intergenic
GGGGTTTCAAGCACGAAAGT+TGG 0.505130 7:-91247439 MsG0780041465.01.T01:CDS
TATTCATGTCATCGATGTAA+AGG 0.505177 7:+91249449 None:intergenic
ACAAGGACATAAAGGAATAT+GGG 0.507989 7:+91248123 None:intergenic
TCGTCGACGGAATCATCAAC+TGG 0.516484 7:+91251754 None:intergenic
GCTACATGTATCAAACTGTT+GGG 0.517649 7:-91251723 MsG0780041465.01.T01:CDS
ACTGATAATGTCAATAATGA+TGG 0.523248 7:-91247311 MsG0780041465.01.T01:CDS
ATCAAATATGCTGAATGTAT+GGG 0.523394 7:-91251688 MsG0780041465.01.T01:CDS
TACCATTTCATTGAGGAGCA+AGG 0.525232 7:+91251420 None:intergenic
CTGCAAAGATTCATGGTAGG+AGG 0.525537 7:+91248369 None:intergenic
ATAAATGTTTGCGGAGAAGG+AGG 0.529494 7:-91250284 MsG0780041465.01.T01:CDS
TTTCACAAGGTAGCTGCCAT+GGG 0.529657 7:-91250511 MsG0780041465.01.T01:intron
TTCTCTACCTAAATCACGAA+TGG 0.531538 7:-91247282 MsG0780041465.01.T01:CDS
AAATGTTTGCGGAGAAGGAG+GGG 0.534898 7:-91250282 MsG0780041465.01.T01:CDS
GTAATCAAGAGGCTTGCATA+AGG 0.539542 7:+91249758 None:intergenic
CCCATTCTTTATGTCGAGGA+TGG 0.540339 7:-91247521 MsG0780041465.01.T01:CDS
CAGCTATCTTCATTTGTCTG+AGG 0.547119 7:+91248181 None:intergenic
CCATCCTCGACATAAAGAAT+GGG 0.549132 7:+91247521 None:intergenic
AATAGATAACGACTTTGCCT+GGG 0.551068 7:-91247216 MsG0780041465.01.T01:CDS
AACCAATTACCATTTCATTG+AGG 0.552375 7:+91251413 None:intergenic
CTTGGTTATAAAAGGACTCA+AGG 0.554072 7:-91251616 MsG0780041465.01.T01:CDS
TCAATATCGACATCTGCAGT+TGG 0.554099 7:-91248276 MsG0780041465.01.T01:CDS
TAAATGTTTGCGGAGAAGGA+GGG 0.567566 7:-91250283 MsG0780041465.01.T01:CDS
CCTGTTCCAGTTCAACCCCA+GGG 0.570735 7:+91248340 None:intergenic
TGTAGAAATTGAGACCATCA+TGG 0.571539 7:-91247492 MsG0780041465.01.T01:CDS
TCAAAGACATCATGTTATTG+GGG 0.575374 7:-91247458 MsG0780041465.01.T01:CDS
CTAAAATCCATCTCAAGTAG+AGG 0.575649 7:+91249337 None:intergenic
TCATATGGAATAAATGTTTG+CGG 0.578050 7:-91250293 MsG0780041465.01.T01:CDS
AACTTTCTCAAATAAGTCAG+AGG 0.579904 7:-91246472 MsG0780041465.01.T01:CDS
AGAACACACAGCAGTAACAG+AGG 0.585294 7:+91251540 None:intergenic
CTTGCAGGCAACCTTGCATG+AGG 0.585355 7:-91248427 MsG0780041465.01.T01:intron
TTGGATCCTGCAAAGCACTT+GGG 0.586975 7:-91250487 MsG0780041465.01.T01:CDS
ACCATGAATCTTTGCAGTGG+AGG 0.594200 7:-91248363 MsG0780041465.01.T01:CDS
ACTAACCATTATATCTTCCC+AGG 0.594401 7:+91247199 None:intergenic
TCATTATTGACATTATCAGT+AGG 0.594528 7:+91247314 None:intergenic
ATCTTGCAACCAGCAACACA+TGG 0.595357 7:+91249668 None:intergenic
GAGGGTATACTTCACATGGC+TGG 0.597033 7:-91248408 MsG0780041465.01.T01:CDS
TGCAAAGATTCATGGTAGGA+GGG 0.600755 7:+91248370 None:intergenic
TGGGATTGCCATTGTTCAGG+AGG 0.601863 7:-91251669 MsG0780041465.01.T01:CDS
AGGAACTTACAATAAAGAGC+GGG 0.603286 7:+91250234 None:intergenic
TGAATTCTCCTCCTGAACAA+TGG 0.603435 7:+91251661 None:intergenic
ATTGGATAAGTGTAATCAAG+AGG 0.608522 7:+91249747 None:intergenic
ACTTTCTCAAATAAGTCAGA+GGG 0.609139 7:-91246471 MsG0780041465.01.T01:CDS
ATTTCAACTGTACTTCGAGA+TGG 0.609688 7:+91249361 None:intergenic
AAAAGTGCATTGCAGAACAT+AGG 0.614047 7:+91246497 None:intergenic
GTAGCTATCGAGTTCGTCGA+CGG 0.614965 7:+91251741 None:intergenic
GAAGCCCATTCTTTATGTCG+AGG 0.615387 7:-91247525 MsG0780041465.01.T01:CDS
AATAGTAGCTGTAACTGTGA+AGG 0.625344 7:-91250914 MsG0780041465.01.T01:intron
GTGAAGTATACCCTCATGCA+AGG 0.630355 7:+91248416 None:intergenic
AAGATAGCTGAATTACAGGA+AGG 0.634710 7:-91248168 MsG0780041465.01.T01:CDS
GAACACACAGCAGTAACAGA+GGG 0.635977 7:+91251541 None:intergenic
GCATGAGGGTATACTTCACA+TGG 0.636722 7:-91248412 MsG0780041465.01.T01:CDS
CTTTGCAGGATCCAAACCCA+TGG 0.641084 7:+91250495 None:intergenic
AGTAAGCCTTCAAATGTCAG+TGG 0.645405 7:-91246531 MsG0780041465.01.T01:CDS
CCTACCATGAATCTTTGCAG+TGG 0.651514 7:-91248366 MsG0780041465.01.T01:CDS
TTGCAGGCAACCTTGCATGA+GGG 0.657732 7:-91248426 MsG0780041465.01.T01:intron
CCACTGCAAAGATTCATGGT+AGG 0.663579 7:+91248366 None:intergenic
TGGTTGCAAGATTCATGCAA+TGG 0.665299 7:-91249657 MsG0780041465.01.T01:intron
ATATGTGAAGTTTATAACAC+AGG 0.670169 7:-91249404 MsG0780041465.01.T01:CDS
TTCACATGGCTGGTCAACTG+GGG 0.673143 7:-91248398 MsG0780041465.01.T01:CDS
TCTGTGTTTGAAGTGCATGA+CGG 0.689571 7:-91249798 MsG0780041465.01.T01:CDS
TGAAGTTTATAACACAGGAG+AGG 0.694284 7:-91249399 MsG0780041465.01.T01:CDS
TCTTTGCAGTGGAGGCCCTG+GGG 0.696989 7:-91248355 MsG0780041465.01.T01:CDS
TAGGAACTTACAATAAAGAG+CGG 0.707100 7:+91250233 None:intergenic
TGACATGAATAAGTTCTCTG+AGG 0.714323 7:-91249437 MsG0780041465.01.T01:CDS
ATGCAAGTAAGCATTTAACG+AGG 0.725793 7:+91250453 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAATACAAAAGAAAAA+TGG - Chr7:91250491-91250510 MsG0780041465.01.T01:CDS 10.0%
!! ACAATATTATCCTTTATTAA+TGG - Chr7:91250285-91250304 MsG0780041465.01.T01:CDS 15.0%
!! ATCCTTAAATTAAATATGTT+AGG - Chr7:91249546-91249565 MsG0780041465.01.T01:intron 15.0%
!! ATTTATCAAAATATACATAC+CGG - Chr7:91251022-91251041 MsG0780041465.01.T01:intron 15.0%
!! GTAATAATCTTAAGATAAAA+AGG - Chr7:91251520-91251539 MsG0780041465.01.T01:CDS 15.0%
!! TCCTTAAATTAAATATGTTA+GGG - Chr7:91249547-91249566 MsG0780041465.01.T01:intron 15.0%
!!! AAGATTTAATGATTATTTTG+AGG - Chr7:91248665-91248684 MsG0780041465.01.T01:intron 15.0%
!!! TCTTTTTTCAATTTGTATAT+GGG - Chr7:91247345-91247364 MsG0780041465.01.T01:CDS 15.0%
!! AAAAATAAGATCTCTCTAAA+TGG + Chr7:91247415-91247434 None:intergenic 20.0%
!! AAGAGAGTAATAAATAGTAA+AGG - Chr7:91250339-91250358 MsG0780041465.01.T01:intron 20.0%
!! AATTCTTTATCTATTTCACA+AGG - Chr7:91247672-91247691 MsG0780041465.01.T01:intron 20.0%
!! AGAATAATAAATTTGATCAC+TGG + Chr7:91251546-91251565 None:intergenic 20.0%
!! AGAGAGTAATAAATAGTAAA+GGG - Chr7:91250340-91250359 MsG0780041465.01.T01:intron 20.0%
!! ATATTATTGTGAAATTGACT+TGG - Chr7:91249063-91249082 MsG0780041465.01.T01:intron 20.0%
!! ATTAAAGAAACACAAAGTAA+AGG + Chr7:91249147-91249166 None:intergenic 20.0%
!! ATTATCCTTTATTAATGGTA+TGG - Chr7:91250290-91250309 MsG0780041465.01.T01:CDS 20.0%
!! GCTATATACTCTTAAAAATA+GGG - Chr7:91247506-91247525 MsG0780041465.01.T01:CDS 20.0%
!! TATTGTAAAGTAACTCATAA+AGG + Chr7:91250271-91250290 None:intergenic 20.0%
!! TGCAAATAATAAAGGTAAAA+AGG - Chr7:91248905-91248924 MsG0780041465.01.T01:intron 20.0%
!! TTATAGGTTTAAATCATTGT+GGG + Chr7:91251446-91251465 None:intergenic 20.0%
!! TTATCCTTTATTAATGGTAT+GGG - Chr7:91250291-91250310 MsG0780041465.01.T01:CDS 20.0%
!!! AAATAATTCTAACTCTGTTT+TGG - Chr7:91247238-91247257 MsG0780041465.01.T01:CDS 20.0%
!!! AAGGAATTAAAGTATCATTT+TGG + Chr7:91249511-91249530 None:intergenic 20.0%
!!! AGGAATTAAAGTATCATTTT+GGG + Chr7:91249510-91249529 None:intergenic 20.0%
!!! ATCATTTTGAAAACATGAAA+TGG + Chr7:91251106-91251125 None:intergenic 20.0%
!!! CATATTTAATTTAAGGATGA+AGG + Chr7:91249544-91249563 None:intergenic 20.0%
!!! CTCTTTTTTCAATTTGTATA+TGG - Chr7:91247344-91247363 MsG0780041465.01.T01:CDS 20.0%
!!! TAAATAGTAAAGGGTATAAA+AGG - Chr7:91250349-91250368 MsG0780041465.01.T01:intron 20.0%
!!! TAATTTGATTAGCTTCATAT+GGG - Chr7:91249163-91249182 MsG0780041465.01.T01:intron 20.0%
!!! TATTATTGTGAAATTGACTT+GGG - Chr7:91249064-91249083 MsG0780041465.01.T01:intron 20.0%
!!! TCATTTTGAAAACATGAAAT+GGG + Chr7:91251105-91251124 None:intergenic 20.0%
!!! TTAATTTGATTAGCTTCATA+TGG - Chr7:91249162-91249181 MsG0780041465.01.T01:intron 20.0%
!!! TTCTAAAAATATCACTTTAC+TGG - Chr7:91249958-91249977 MsG0780041465.01.T01:intron 20.0%
!!! TTGACAAGATTTTAAATCAT+TGG - Chr7:91249293-91249312 MsG0780041465.01.T01:intron 20.0%
!!! TTTTTGTAATTTTGTGTACT+TGG - Chr7:91247630-91247649 MsG0780041465.01.T01:intron 20.0%
! AAAACTTGTCCCAAATTATA+GGG + Chr7:91250409-91250428 None:intergenic 25.0%
! AAAATAGAACCAACAAAAAG+TGG + Chr7:91251412-91251431 None:intergenic 25.0%
! AAATATCGATCATAAGTTTG+AGG + Chr7:91248156-91248175 None:intergenic 25.0%
! AAGTTGAATTCCAATGAAAA+AGG + Chr7:91247609-91247628 None:intergenic 25.0%
! AATCTCTAAACCTATACAAA+TGG + Chr7:91250187-91250206 None:intergenic 25.0%
! AATTCCAATGAAAAAGGAAA+TGG + Chr7:91247603-91247622 None:intergenic 25.0%
! ACTAGCAATTTGTAATAAGA+GGG - Chr7:91251311-91251330 MsG0780041465.01.T01:intron 25.0%
! ACTTGTGATTGACAATATAA+TGG + Chr7:91250829-91250848 None:intergenic 25.0%
! ATATGTGAAGTTTATAACAC+AGG - Chr7:91248792-91248811 MsG0780041465.01.T01:intron 25.0%
! ATCAAATATGCTGAATGTAT+GGG - Chr7:91246508-91246527 MsG0780041465.01.T01:CDS 25.0%
! ATCTCTAAACCTATACAAAT+GGG + Chr7:91250186-91250205 None:intergenic 25.0%
! ATGGAGGAATAAAATTAATC+CGG + Chr7:91251044-91251063 None:intergenic 25.0%
! ATTTAGAAGAGTCATATGAT+AGG + Chr7:91247386-91247405 None:intergenic 25.0%
! CAAACATATGTTATGTAATC+TGG - Chr7:91250548-91250567 MsG0780041465.01.T01:intron 25.0%
! CAAATATATGTTCGAAACAA+TGG + Chr7:91251063-91251082 None:intergenic 25.0%
! CACAATAATATTAATGAAGC+AGG + Chr7:91249054-91249073 None:intergenic 25.0%
! CTTATAGGTTTAAATCATTG+TGG + Chr7:91251447-91251466 None:intergenic 25.0%
! GAAATCAATGCAAAATATTC+TGG - Chr7:91249223-91249242 MsG0780041465.01.T01:intron 25.0%
! GGCTATATACTCTTAAAAAT+AGG - Chr7:91247505-91247524 MsG0780041465.01.T01:CDS 25.0%
! TAAATGTTGTCCATTGATAT+CGG + Chr7:91247463-91247482 None:intergenic 25.0%
! TCATATGGAATAAATGTTTG+CGG - Chr7:91247903-91247922 MsG0780041465.01.T01:intron 25.0%
! TCATTATTGACATTATCAGT+AGG + Chr7:91250885-91250904 None:intergenic 25.0%
! TCCTCAAAATATTTATGTCA+TGG - Chr7:91250587-91250606 MsG0780041465.01.T01:intron 25.0%
! TGTAAAACACCCTATAATTT+GGG - Chr7:91250397-91250416 MsG0780041465.01.T01:intron 25.0%
! TTATATATACACACAGAGAA+AGG + Chr7:91247803-91247822 None:intergenic 25.0%
! TTCAAAGACATCATGTTATT+GGG - Chr7:91250737-91250756 MsG0780041465.01.T01:intron 25.0%
!! ACCATGACATAAATATTTTG+AGG + Chr7:91250591-91250610 None:intergenic 25.0%
!! ACTGATAATGTCAATAATGA+TGG - Chr7:91250885-91250904 MsG0780041465.01.T01:intron 25.0%
!! CAGTGTGTTTAAACTAATTT+TGG - Chr7:91249478-91249497 MsG0780041465.01.T01:CDS 25.0%
!! GCCCTAACATATTTAATTTA+AGG + Chr7:91249551-91249570 None:intergenic 25.0%
!! GGATACAAATAATTTGTGTA+TGG - Chr7:91251194-91251213 MsG0780041465.01.T01:intron 25.0%
!! GTTTCTCTCATAATTTTTCT+AGG + Chr7:91247093-91247112 None:intergenic 25.0%
!! TGTACTTGGATTGTTTATTT+TGG - Chr7:91247644-91247663 MsG0780041465.01.T01:intron 25.0%
!! TTTTCTAAATGAAATGCCAA+GGG + Chr7:91248312-91248331 None:intergenic 25.0%
!! TTTTTCGTACATAACTATCA+AGG - Chr7:91249375-91249394 MsG0780041465.01.T01:CDS 25.0%
!!! ACATATATTTGTTGTGCATT+CGG - Chr7:91251072-91251091 MsG0780041465.01.T01:intron 25.0%
!!! ATTGAATTTTCAAGATCAGT+AGG + Chr7:91248109-91248128 None:intergenic 25.0%
!!! GGAATTAAAGTATCATTTTG+GGG + Chr7:91249509-91249528 None:intergenic 25.0%
!!! GTTTTGGTTGCAAATAATAA+AGG - Chr7:91248897-91248916 MsG0780041465.01.T01:intron 25.0%
!!! TTTTTCAATTTGTATATGGG+AGG - Chr7:91247348-91247367 MsG0780041465.01.T01:CDS 25.0%
AACAAGGACATAAAGGAATA+TGG + Chr7:91250077-91250096 None:intergenic 30.0%
AACCAATTACCATTTCATTG+AGG + Chr7:91246786-91246805 None:intergenic 30.0%
AACTTTCTCAAATAAGTCAG+AGG - Chr7:91251724-91251743 MsG0780041465.01.T01:CDS 30.0%
AATGAAGATAGCTGAATTAC+AGG - Chr7:91250024-91250043 MsG0780041465.01.T01:intron 30.0%
ACAACATTAGAGAGAAAGAT+TGG - Chr7:91246932-91246951 MsG0780041465.01.T01:intron 30.0%
ACAAGGACATAAAGGAATAT+GGG + Chr7:91250076-91250095 None:intergenic 30.0%
ACTTTCTCAAATAAGTCAGA+GGG - Chr7:91251725-91251744 MsG0780041465.01.T01:CDS 30.0%
AGTGAAGTTCACTAAGTTTA+GGG - Chr7:91249639-91249658 MsG0780041465.01.T01:intron 30.0%
ATATATGTTCGAAACAATGG+AGG + Chr7:91251060-91251079 None:intergenic 30.0%
ATCCAATTTCAAATGCTATC+TGG - Chr7:91249715-91249734 MsG0780041465.01.T01:CDS 30.0%
ATCTTGAGCTTGGTTATAAA+AGG - Chr7:91246572-91246591 MsG0780041465.01.T01:intron 30.0%
ATTGGATAAGTGTAATCAAG+AGG + Chr7:91248452-91248471 None:intergenic 30.0%
CAACATTAGAGAGAAAGATT+GGG - Chr7:91246933-91246952 MsG0780041465.01.T01:intron 30.0%
CACTAGCAATTTGTAATAAG+AGG - Chr7:91251310-91251329 MsG0780041465.01.T01:intron 30.0%
CATCAAATATGCTGAATGTA+TGG - Chr7:91246507-91246526 MsG0780041465.01.T01:CDS 30.0%
CTGTAAAACACCCTATAATT+TGG - Chr7:91250396-91250415 MsG0780041465.01.T01:intron 30.0%
CTTTCCCATACCATTAATAA+AGG + Chr7:91250298-91250317 None:intergenic 30.0%
GAAAACTTGTCCCAAATTAT+AGG + Chr7:91250410-91250429 None:intergenic 30.0%
GAATAGATACAGAGAAGAAA+CGG + Chr7:91248184-91248203 None:intergenic 30.0%
GAGATTTCTATGCAGAATTT+GGG - Chr7:91248374-91248393 MsG0780041465.01.T01:CDS 30.0%
GGCATTTCATTTAGAAAACA+AGG - Chr7:91248314-91248333 MsG0780041465.01.T01:CDS 30.0%
GTGTCAAAGAACAAATAATG+TGG + Chr7:91248612-91248631 None:intergenic 30.0%
GTTCAAAGACATCATGTTAT+TGG - Chr7:91250736-91250755 MsG0780041465.01.T01:intron 30.0%
TAAATTGTCCGAGAAAGATT+AGG + Chr7:91251594-91251613 None:intergenic 30.0%
TAGGAACTTACAATAAAGAG+CGG + Chr7:91247966-91247985 None:intergenic 30.0%
TATGGGAACAGTTTATTCTT+TGG - Chr7:91249180-91249199 MsG0780041465.01.T01:intron 30.0%
TATTCATGTCATCGATGTAA+AGG + Chr7:91248750-91248769 None:intergenic 30.0%
TCAAAGACATCATGTTATTG+GGG - Chr7:91250738-91250757 MsG0780041465.01.T01:intron 30.0%
TCAAATCACATAAACCAAAG+AGG + Chr7:91250520-91250539 None:intergenic 30.0%
TCACACTCTTAAAATAGCAA+AGG + Chr7:91250247-91250266 None:intergenic 30.0%
TCTAATACTCACTCTCTTAT+AGG + Chr7:91251462-91251481 None:intergenic 30.0%
TGAGATTTCTATGCAGAATT+TGG - Chr7:91248373-91248392 MsG0780041465.01.T01:CDS 30.0%
TGTAGATTGACATTGTTCTA+TGG - Chr7:91247836-91247855 MsG0780041465.01.T01:intron 30.0%
TTATGTTCTACGACATCAAT+TGG + Chr7:91248470-91248489 None:intergenic 30.0%
TTTCTTTATAGCAGATTTGC+AGG - Chr7:91248642-91248661 MsG0780041465.01.T01:intron 30.0%
! AAACTAGGTTTAGTTGGTTT+GGG - Chr7:91246982-91247001 MsG0780041465.01.T01:intron 30.0%
! AACAGTTTATTCTTTGGAAG+TGG - Chr7:91249186-91249205 MsG0780041465.01.T01:intron 30.0%
! ACAGTTTATTCTTTGGAAGT+GGG - Chr7:91249187-91249206 MsG0780041465.01.T01:intron 30.0%
! ACTTTCTTCCTCAATCATTT+TGG - Chr7:91251156-91251175 MsG0780041465.01.T01:intron 30.0%
! ATAGGGTTGCTTTGAATATA+TGG - Chr7:91247523-91247542 MsG0780041465.01.T01:CDS 30.0%
! ATGGTTGCTAACAATTGTTT+TGG - Chr7:91250606-91250625 MsG0780041465.01.T01:intron 30.0%
! CTTTCTTCCTCAATCATTTT+GGG - Chr7:91251157-91251176 MsG0780041465.01.T01:intron 30.0%
! GTTTTCTAAATGAAATGCCA+AGG + Chr7:91248313-91248332 None:intergenic 30.0%
! TACCAGATAGCATTTGAAAT+TGG + Chr7:91249720-91249739 None:intergenic 30.0%
! TGGTTGCTAACAATTGTTTT+GGG - Chr7:91250607-91250626 MsG0780041465.01.T01:intron 30.0%
! TTCCACATCTTTTCTACTAT+AGG + Chr7:91246964-91246983 None:intergenic 30.0%
! TTTCTTCCTCAATCATTTTG+GGG - Chr7:91251158-91251177 MsG0780041465.01.T01:intron 30.0%
!! AAGAAACTAGAGTACCTTTT+TGG + Chr7:91250109-91250128 None:intergenic 30.0%
!! GAAACCATTTCCTTTTTCAT+TGG - Chr7:91247596-91247615 MsG0780041465.01.T01:intron 30.0%
!!! TTGTCTTGTGTTTTAAAGAG+TGG + Chr7:91248347-91248366 None:intergenic 30.0%
AAGAAAAATGGACACCTCTT+TGG - Chr7:91250503-91250522 MsG0780041465.01.T01:CDS 35.0%
AAGATAGCTGAATTACAGGA+AGG - Chr7:91250028-91250047 MsG0780041465.01.T01:intron 35.0%
AATAGATAACGACTTTGCCT+GGG - Chr7:91250980-91250999 MsG0780041465.01.T01:intron 35.0%
AATAGTAGCTGTAACTGTGA+AGG - Chr7:91247282-91247301 MsG0780041465.01.T01:CDS 35.0%
AATGCAAAATATTCTGGCAC+TGG - Chr7:91249229-91249248 MsG0780041465.01.T01:intron 35.0%
ACTAAAAAACAGTGAAGCAG+TGG - Chr7:91249880-91249899 MsG0780041465.01.T01:intron 35.0%
ACTAACCATTATATCTTCCC+AGG + Chr7:91251000-91251019 None:intergenic 35.0%
AGCTACATGTATCAAACTGT+TGG - Chr7:91246472-91246491 MsG0780041465.01.T01:CDS 35.0%
AGGAACTTACAATAAAGAGC+GGG + Chr7:91247965-91247984 None:intergenic 35.0%
AGGAAGATGGAGTACAATAT+AGG - Chr7:91251272-91251291 MsG0780041465.01.T01:intron 35.0%
AGGACCATACAAAACAAACA+GGG + Chr7:91251574-91251593 None:intergenic 35.0%
AGTTCCATGATATGCTAATG+CGG - Chr7:91247484-91247503 MsG0780041465.01.T01:CDS 35.0%
ATAGAACCAACAAAAAGTGG+TGG + Chr7:91251409-91251428 None:intergenic 35.0%
ATATACACACAGAGAAAGGA+AGG + Chr7:91247799-91247818 None:intergenic 35.0%
ATGCAAGTAAGCATTTAACG+AGG + Chr7:91247746-91247765 None:intergenic 35.0%
ATGTGGAAACTAGGTTTAGT+TGG - Chr7:91246976-91246995 MsG0780041465.01.T01:intron 35.0%
ATTGTCAATCACAAGTGTTC+TGG - Chr7:91250833-91250852 MsG0780041465.01.T01:intron 35.0%
ATTTCAACTGTACTTCGAGA+TGG + Chr7:91248838-91248857 None:intergenic 35.0%
CACCTATAGTAGAAAAGATG+TGG - Chr7:91246959-91246978 MsG0780041465.01.T01:intron 35.0%
CAGTGAAGTTCACTAAGTTT+AGG - Chr7:91249638-91249657 MsG0780041465.01.T01:intron 35.0%
CTAAAATCCATCTCAAGTAG+AGG + Chr7:91248862-91248881 None:intergenic 35.0%
CTACTATTCCATTTGCAATC+TGG + Chr7:91247270-91247289 None:intergenic 35.0%
CTCCTCAATGAAATGGTAAT+TGG - Chr7:91246781-91246800 MsG0780041465.01.T01:intron 35.0%
CTTGACGAATTGCATATCAA+TGG + Chr7:91250159-91250178 None:intergenic 35.0%
CTTGGTTATAAAAGGACTCA+AGG - Chr7:91246580-91246599 MsG0780041465.01.T01:intron 35.0%
GAAACTAGGTTTAGTTGGTT+TGG - Chr7:91246981-91247000 MsG0780041465.01.T01:intron 35.0%
GAAACTGACATGATACTGTT+TGG + Chr7:91249256-91249275 None:intergenic 35.0%
GAGTCATATGATAGGAACAT+AGG + Chr7:91247378-91247397 None:intergenic 35.0%
GCTACATGTATCAAACTGTT+GGG - Chr7:91246473-91246492 MsG0780041465.01.T01:CDS 35.0%
GGATGAAGGAATGAAATACA+AGG + Chr7:91249530-91249549 None:intergenic 35.0%
GTAGAAAAGATGTGGAAACT+AGG - Chr7:91246967-91246986 MsG0780041465.01.T01:intron 35.0%
TAATAGATAACGACTTTGCC+TGG - Chr7:91250979-91250998 MsG0780041465.01.T01:intron 35.0%
TAGAACCAACAAAAAGTGGT+GGG + Chr7:91251408-91251427 None:intergenic 35.0%
TAGGACCATACAAAACAAAC+AGG + Chr7:91251575-91251594 None:intergenic 35.0%
TATAATGGCACATAGCTTTC+CGG + Chr7:91250814-91250833 None:intergenic 35.0%
TCATCCAATAAAAGAGTGAG+TGG + Chr7:91251372-91251391 None:intergenic 35.0%
TGAACAAGATCTTTCCATGA+TGG + Chr7:91250721-91250740 None:intergenic 35.0%
TGAAGTTTATAACACAGGAG+AGG - Chr7:91248797-91248816 MsG0780041465.01.T01:intron 35.0%
TGACATGAATAAGTTCTCTG+AGG - Chr7:91248759-91248778 MsG0780041465.01.T01:intron 35.0%
TGATATGCAATTCGTCAAGA+AGG - Chr7:91250160-91250179 MsG0780041465.01.T01:intron 35.0%
TGTAGAAATTGAGACCATCA+TGG - Chr7:91250704-91250723 MsG0780041465.01.T01:intron 35.0%
TGTATGGTCCTAATCTTTCT+CGG - Chr7:91251583-91251602 MsG0780041465.01.T01:CDS 35.0%
TTATCAGTAGGCAAAGAATC+AGG + Chr7:91250873-91250892 None:intergenic 35.0%
TTCACGAATTAAGCTTGATG+AGG - Chr7:91246860-91246879 MsG0780041465.01.T01:intron 35.0%
TTCTCTACCTAAATCACGAA+TGG - Chr7:91250914-91250933 MsG0780041465.01.T01:intron 35.0%
TTGGGTGAATATATGTGTGA+TGG - Chr7:91250625-91250644 MsG0780041465.01.T01:intron 35.0%
TTGTTCCTGATCTACCAAAA+AGG - Chr7:91250092-91250111 MsG0780041465.01.T01:intron 35.0%
TTTCAGAAATGTGTGATTCC+CGG - Chr7:91250792-91250811 MsG0780041465.01.T01:intron 35.0%
TTTGAAGGCAAAAGAACATG+AGG + Chr7:91251222-91251241 None:intergenic 35.0%
! AAAAGTGCATTGCAGAACAT+AGG + Chr7:91251702-91251721 None:intergenic 35.0%
! AAGTCTTATACCACTGATTG+GGG + Chr7:91247190-91247209 None:intergenic 35.0%
! ACTCTTTTTGACAGGTCATA+TGG - Chr7:91247888-91247907 MsG0780041465.01.T01:intron 35.0%
! AGTTGGGGTGTTCTTATTAA+AGG - Chr7:91249583-91249602 MsG0780041465.01.T01:intron 35.0%
! CAAGTCTTATACCACTGATT+GGG + Chr7:91247191-91247210 None:intergenic 35.0%
! CATGTTCTTTTGCCTTCAAA+AGG - Chr7:91251222-91251241 MsG0780041465.01.T01:intron 35.0%
! CCTCAGTTTTCCATAAAACT+GGG - Chr7:91248042-91248061 MsG0780041465.01.T01:intron 35.0%
! GTAAATTGAGCCCAGTTTTA+TGG + Chr7:91248055-91248074 None:intergenic 35.0%
! GTAGAGCATATGTGAAGTTT+TGG - Chr7:91248881-91248900 MsG0780041465.01.T01:intron 35.0%
! TCCTCAGTTTTCCATAAAAC+TGG - Chr7:91248041-91248060 MsG0780041465.01.T01:intron 35.0%
! TCTACCACTCACTCTTTTAT+TGG - Chr7:91251365-91251384 MsG0780041465.01.T01:intron 35.0%
! TCTGTGTAACTCTTTTTGAC+AGG - Chr7:91247880-91247899 MsG0780041465.01.T01:intron 35.0%
! TTGTTTCTTTGGCGTACTTA+TGG - Chr7:91246740-91246759 MsG0780041465.01.T01:intron 35.0%
! TTTTGTTACGCCAAGTCAAA+AGG - Chr7:91246626-91246645 MsG0780041465.01.T01:intron 35.0%
!! ATGTGCAGAGTATTTCTAGT+TGG - Chr7:91248934-91248953 MsG0780041465.01.T01:intron 35.0%
!! CTGTCGATTCAAGTTGATTT+AGG - Chr7:91249116-91249135 MsG0780041465.01.T01:intron 35.0%
!! TATGTTAGGGCATTGTAACT+AGG - Chr7:91249560-91249579 MsG0780041465.01.T01:intron 35.0%
!! TGTGCAGAGTATTTCTAGTT+GGG - Chr7:91248935-91248954 MsG0780041465.01.T01:intron 35.0%
!! TTTTTGGTAGATCAGGAACA+AGG + Chr7:91250093-91250112 None:intergenic 35.0%
!!! AAAAGGCATCCATGCATTTT+TGG - Chr7:91251239-91251258 MsG0780041465.01.T01:intron 35.0%
!!! AAAGGCATCCATGCATTTTT+GGG - Chr7:91251240-91251259 MsG0780041465.01.T01:intron 35.0%
AACTGCTCCATTCGTGATTT+AGG + Chr7:91250924-91250943 None:intergenic 40.0%
AATGAAATGCCAAGGGATGA+AGG + Chr7:91248305-91248324 None:intergenic 40.0%
ACCATCCTCGACATAAAGAA+TGG + Chr7:91250679-91250698 None:intergenic 40.0%
ACTGACATTTGAAGGCTTAC+TGG + Chr7:91251666-91251685 None:intergenic 40.0%
AGTAAGCCTTCAAATGTCAG+TGG - Chr7:91251665-91251684 MsG0780041465.01.T01:CDS 40.0%
ATAAATGTTTGCGGAGAAGG+AGG - Chr7:91247912-91247931 MsG0780041465.01.T01:intron 40.0%
ATAATGGCACATAGCTTTCC+GGG + Chr7:91250813-91250832 None:intergenic 40.0%
ATAGCCGCATTAGCATATCA+TGG + Chr7:91247491-91247510 None:intergenic 40.0%
ATCCTTGCTCCTCAATGAAA+TGG - Chr7:91246774-91246793 MsG0780041465.01.T01:intron 40.0%
CAGCTATCTTCATTTGTCTG+AGG + Chr7:91250018-91250037 None:intergenic 40.0%
CCAATCAGTGGTATAAGACT+TGG - Chr7:91247189-91247208 MsG0780041465.01.T01:intron 40.0%
CCATCCTCGACATAAAGAAT+GGG + Chr7:91250678-91250697 None:intergenic 40.0%
CTCCTTGCTACAAAATGTAC+AGG + Chr7:91247023-91247042 None:intergenic 40.0%
CTGACATTTGAAGGCTTACT+GGG + Chr7:91251665-91251684 None:intergenic 40.0%
CTTCACTTCAACATATGCAC+TGG + Chr7:91250655-91250674 None:intergenic 40.0%
CTTTGCCTGGGAAGATATAA+TGG - Chr7:91250992-91251011 MsG0780041465.01.T01:intron 40.0%
GATCAGGAACAAGGACATAA+AGG + Chr7:91250084-91250103 None:intergenic 40.0%
GATCAGTAGGAACACATAAC+AGG + Chr7:91248096-91248115 None:intergenic 40.0%
GGAATAAATGTTTGCGGAGA+AGG - Chr7:91247909-91247928 MsG0780041465.01.T01:intron 40.0%
GGACCATACAAAACAAACAG+GGG + Chr7:91251573-91251592 None:intergenic 40.0%
GTAATCAAGAGGCTTGCATA+AGG + Chr7:91248441-91248460 None:intergenic 40.0%
TAAATGTTTGCGGAGAAGGA+GGG - Chr7:91247913-91247932 MsG0780041465.01.T01:intron 40.0%
TACCATTTCATTGAGGAGCA+AGG + Chr7:91246779-91246798 None:intergenic 40.0%
TACTCCATCTTCCTTTACTC+AGG + Chr7:91251266-91251285 None:intergenic 40.0%
TCAAGAAGGCCCATTTGTAT+AGG - Chr7:91250174-91250193 MsG0780041465.01.T01:intron 40.0%
TCAATATCGACATCTGCAGT+TGG - Chr7:91249920-91249939 MsG0780041465.01.T01:intron 40.0%
TGAAATGCCTCTACTTGAGA+TGG - Chr7:91248852-91248871 MsG0780041465.01.T01:intron 40.0%
TGAATTCTCCTCCTGAACAA+TGG + Chr7:91246538-91246557 None:intergenic 40.0%
TGCAAAGATTCATGGTAGGA+GGG + Chr7:91249829-91249848 None:intergenic 40.0%
TGGTTGCAAGATTCATGCAA+TGG - Chr7:91248539-91248558 MsG0780041465.01.T01:intron 40.0%
TTCTCAGTTAACCACACCAA+TGG + Chr7:91247992-91248011 None:intergenic 40.0%
TTGTAAGTTCCTACCACCAT+TGG - Chr7:91247973-91247992 MsG0780041465.01.T01:intron 40.0%
TTGTTCAGGAGGAGAATTCA+AGG - Chr7:91246538-91246557 MsG0780041465.01.T01:CDS 40.0%
! AATGCATGGATGCCTTTTGA+AGG + Chr7:91251237-91251256 None:intergenic 40.0%
! CCAAGTCTTATACCACTGAT+TGG + Chr7:91247192-91247211 None:intergenic 40.0%
! GACCTGTACATTTTGTAGCA+AGG - Chr7:91247018-91247037 MsG0780041465.01.T01:intron 40.0%
! TCATCAAAGCATCTTGAGCT+TGG - Chr7:91246562-91246581 MsG0780041465.01.T01:intron 40.0%
! TCTGTGTTTGAAGTGCATGA+CGG - Chr7:91248398-91248417 MsG0780041465.01.T01:CDS 40.0%
! TGGGGTGTTCTTATTAAAGG+AGG - Chr7:91249586-91249605 MsG0780041465.01.T01:intron 40.0%
! TTGCTAGCAACACTCTCTTT+TGG + Chr7:91251493-91251512 None:intergenic 40.0%
! TTGTCCATTGATATCGGTTG+AGG + Chr7:91247457-91247476 None:intergenic 40.0%
!! AAATTGACTTGGGACATCGT+TGG - Chr7:91249074-91249093 MsG0780041465.01.T01:intron 40.0%
!! CAACTAGCAGCGTTTGATTT+TGG - Chr7:91248700-91248719 MsG0780041465.01.T01:intron 40.0%
!! CCCAGTTTTATGGAAAACTG+AGG + Chr7:91248045-91248064 None:intergenic 40.0%
!! GAAAGTGTTTGTTCGAGGTT+AGG - Chr7:91246715-91246734 MsG0780041465.01.T01:intron 40.0%
!! GAGGTTAGGTCTTGTTTCTT+TGG - Chr7:91246729-91246748 MsG0780041465.01.T01:intron 40.0%
!! GAGTACCTTTTTGGTAGATC+AGG + Chr7:91250100-91250119 None:intergenic 40.0%
!! TCTAATGCTTCTTGACTTGC+AGG - Chr7:91249754-91249773 MsG0780041465.01.T01:CDS 40.0%
!! TTCCTCAATCATTTTGGGGA+GGG - Chr7:91251162-91251181 MsG0780041465.01.T01:intron 40.0%
!! TTTTGGGGAGGGAGATATTA+TGG - Chr7:91251173-91251192 MsG0780041465.01.T01:intron 40.0%
!!! CATATCCCACCACTTTTTGT+TGG - Chr7:91251400-91251419 MsG0780041465.01.T01:intron 40.0%
AAATGTTTGCGGAGAAGGAG+GGG - Chr7:91247914-91247933 MsG0780041465.01.T01:intron 45.0%
ACACATTCTCCATGTGTTGC+TGG - Chr7:91248519-91248538 MsG0780041465.01.T01:intron 45.0%
ACCATGAATCTTTGCAGTGG+AGG - Chr7:91249833-91249852 MsG0780041465.01.T01:intron 45.0%
AGAACACACAGCAGTAACAG+AGG + Chr7:91246659-91246678 None:intergenic 45.0%
AGCTCCTCAACCGATATCAA+TGG - Chr7:91247450-91247469 MsG0780041465.01.T01:CDS 45.0%
AGGATGTTGTGTTGGATGTG+TGG - Chr7:91246880-91246899 MsG0780041465.01.T01:intron 45.0%
ATCTTGCAACCAGCAACACA+TGG + Chr7:91248531-91248550 None:intergenic 45.0%
ATTTCACAAGGTAGCTGCCA+TGG - Chr7:91247684-91247703 MsG0780041465.01.T01:intron 45.0%
CCACTGCAAAGATTCATGGT+AGG + Chr7:91249833-91249852 None:intergenic 45.0%
CCCATTCTTTATGTCGAGGA+TGG - Chr7:91250675-91250694 MsG0780041465.01.T01:intron 45.0%
CCTACCATGAATCTTTGCAG+TGG - Chr7:91249830-91249849 MsG0780041465.01.T01:intron 45.0%
CTCATGTCATGCAGAGTTTG+AGG - Chr7:91251631-91251650 MsG0780041465.01.T01:CDS 45.0%
CTGCAAAGATTCATGGTAGG+AGG + Chr7:91249830-91249849 None:intergenic 45.0%
GAACACACAGCAGTAACAGA+GGG + Chr7:91246658-91246677 None:intergenic 45.0%
GAAGCCCATTCTTTATGTCG+AGG - Chr7:91250671-91250690 MsG0780041465.01.T01:intron 45.0%
GCTTGATGAGGATGTTGTGT+TGG - Chr7:91246872-91246891 MsG0780041465.01.T01:intron 45.0%
GGCATTGTAACTAGGAGTTG+GGG - Chr7:91249568-91249587 MsG0780041465.01.T01:intron 45.0%
GGTCTTGACCAGATTGCAAA+TGG - Chr7:91247259-91247278 MsG0780041465.01.T01:CDS 45.0%
GTATGGGATTGCCATTGTTC+AGG - Chr7:91246524-91246543 MsG0780041465.01.T01:CDS 45.0%
GTGAAGTATACCCTCATGCA+AGG + Chr7:91249783-91249802 None:intergenic 45.0%
TACTCAGGCCCAAAAATGCA+TGG + Chr7:91251251-91251270 None:intergenic 45.0%
TCAGCTCCACTGACATTTGA+AGG + Chr7:91251674-91251693 None:intergenic 45.0%
TCAGTTAACCACACCAATGG+TGG + Chr7:91247989-91248008 None:intergenic 45.0%
TCTGTTACTGCTGTGTGTTC+TGG - Chr7:91246658-91246677 MsG0780041465.01.T01:intron 45.0%
TCTTTACCCAAGTGCTTTGC+AGG + Chr7:91247718-91247737 None:intergenic 45.0%
TTAACCACACCAATGGTGGT+AGG + Chr7:91247985-91248004 None:intergenic 45.0%
TTCCTCTGTCTCTAGTGATC+TGG + Chr7:91247070-91247089 None:intergenic 45.0%
TTCGAGATGGTACGCCAAAT+GGG + Chr7:91248825-91248844 None:intergenic 45.0%
TTTCACAAGGTAGCTGCCAT+GGG - Chr7:91247685-91247704 MsG0780041465.01.T01:intron 45.0%
! AGCAAGGAGCGTAAATCAGA+TGG - Chr7:91247034-91247053 MsG0780041465.01.T01:intron 45.0%
! GCATGAGGGTATACTTCACA+TGG - Chr7:91249784-91249803 MsG0780041465.01.T01:CDS 45.0%
! GGGCATTGTAACTAGGAGTT+GGG - Chr7:91249567-91249586 MsG0780041465.01.T01:intron 45.0%
! TTGGATCCTGCAAAGCACTT+GGG - Chr7:91247709-91247728 MsG0780041465.01.T01:intron 45.0%
! TTTGGATCCTGCAAAGCACT+TGG - Chr7:91247708-91247727 MsG0780041465.01.T01:intron 45.0%
!! AGGGAATCTGCCTTTTGACT+TGG + Chr7:91246639-91246658 None:intergenic 45.0%
!! AGGGCATTGTAACTAGGAGT+TGG - Chr7:91249566-91249585 MsG0780041465.01.T01:intron 45.0%
!! CTTCCTCAATCATTTTGGGG+AGG - Chr7:91251161-91251180 MsG0780041465.01.T01:intron 45.0%
!! GCATTTTTGGGCCTGAGTAA+AGG - Chr7:91251252-91251271 MsG0780041465.01.T01:intron 45.0%
!! GTGTCGAAAGTGTTTGTTCG+AGG - Chr7:91246710-91246729 MsG0780041465.01.T01:intron 45.0%
!! TAGCAGCGTTTGATTTTGGC+TGG - Chr7:91248704-91248723 MsG0780041465.01.T01:intron 45.0%
!!! AGCAGCGTTTGATTTTGGCT+GGG - Chr7:91248705-91248724 MsG0780041465.01.T01:intron 45.0%
!!! CTGCCCCTGTTTGTTTTGTA+TGG - Chr7:91251567-91251586 MsG0780041465.01.T01:CDS 45.0%
AAGGACTCCTACAGGAGCTA+TGG + Chr7:91248286-91248305 None:intergenic 50.0%
AAGGGATGAAGGACTCCTAC+AGG + Chr7:91248294-91248313 None:intergenic 50.0%
ACTGATTGGGGTCAGCTACA+AGG + Chr7:91247178-91247197 None:intergenic 50.0%
AGGACTCCTACAGGAGCTAT+GGG + Chr7:91248285-91248304 None:intergenic 50.0%
AGTTCCTACCACCATTGGTG+TGG - Chr7:91247978-91247997 MsG0780041465.01.T01:intron 50.0%
CTCCCTCCCCAAAATGATTG+AGG + Chr7:91251167-91251186 None:intergenic 50.0%
CTTCGAGATGGTACGCCAAA+TGG + Chr7:91248826-91248845 None:intergenic 50.0%
CTTTGCAGGATCCAAACCCA+TGG + Chr7:91247704-91247723 None:intergenic 50.0%
GCCTCCACTGCAAAGATTCA+TGG + Chr7:91249837-91249856 None:intergenic 50.0%
GGGGTTTCAAGCACGAAAGT+TGG - Chr7:91250757-91250776 MsG0780041465.01.T01:intron 50.0%
GTAGCTATCGAGTTCGTCGA+CGG + Chr7:91246458-91246477 None:intergenic 50.0%
TCGTCGACGGAATCATCAAC+TGG + Chr7:91246445-91246464 None:intergenic 50.0%
TGCGTGTTTACCTGGCTGTA+TGG + Chr7:91248977-91248996 None:intergenic 50.0%
TGGGATTGCCATTGTTCAGG+AGG - Chr7:91246527-91246546 MsG0780041465.01.T01:CDS 50.0%
TGGGCCTGAGTAAAGGAAGA+TGG - Chr7:91251259-91251278 MsG0780041465.01.T01:intron 50.0%
TGTAGGAGTCCTTCATCCCT+TGG - Chr7:91248293-91248312 MsG0780041465.01.T01:CDS 50.0%
TTGCAGGCAACCTTGCATGA+GGG - Chr7:91249770-91249789 MsG0780041465.01.T01:CDS 50.0%
TTGTAGCTGACCCCAATCAG+TGG - Chr7:91247177-91247196 MsG0780041465.01.T01:intron 50.0%
! ACTTCACATGGCTGGTCAAC+TGG - Chr7:91249796-91249815 MsG0780041465.01.T01:CDS 50.0%
! CTTCACATGGCTGGTCAACT+GGG - Chr7:91249797-91249816 MsG0780041465.01.T01:CDS 50.0%
! GAGGGTATACTTCACATGGC+TGG - Chr7:91249788-91249807 MsG0780041465.01.T01:CDS 50.0%
! TTCACATGGCTGGTCAACTG+GGG - Chr7:91249798-91249817 MsG0780041465.01.T01:CDS 50.0%
AATCTTTGCAGTGGAGGCCC+TGG - Chr7:91249839-91249858 MsG0780041465.01.T01:intron 55.0%
AGTTGGGCACCTAGCTGCAT+TGG - Chr7:91248951-91248970 MsG0780041465.01.T01:intron 55.0%
ATCTTTGCAGTGGAGGCCCT+GGG - Chr7:91249840-91249859 MsG0780041465.01.T01:intron 55.0%
CAAGGTAGCTGCCATGGGTT+TGG - Chr7:91247690-91247709 MsG0780041465.01.T01:intron 55.0%
CCTGTTCCAGTTCAACCCCA+GGG + Chr7:91249859-91249878 None:intergenic 55.0%
CGCCAGATCACTAGAGACAG+AGG - Chr7:91247065-91247084 MsG0780041465.01.T01:intron 55.0%
CTTGCAGGCAACCTTGCATG+AGG - Chr7:91249769-91249788 MsG0780041465.01.T01:CDS 55.0%
GCTAGCAGTGCGTGTTTACC+TGG + Chr7:91248985-91249004 None:intergenic 55.0%
GCTGTATGGCCAATGCAGCT+AGG + Chr7:91248963-91248982 None:intergenic 55.0%
TCCTACAGGAGCTATGGGAG+AGG + Chr7:91248280-91248299 None:intergenic 55.0%
TCCTCTCCCATAGCTCCTGT+AGG - Chr7:91248276-91248295 MsG0780041465.01.T01:CDS 55.0%
!! ACACAGGAGAGGTGCCCATT+TGG - Chr7:91248808-91248827 MsG0780041465.01.T01:intron 55.0%
CCCTGGGGTTGAACTGGAAC+AGG - Chr7:91249856-91249875 MsG0780041465.01.T01:intron 60.0%
GCCTGTTCCAGTTCAACCCC+AGG + Chr7:91249860-91249879 None:intergenic 60.0%
TCTTTGCAGTGGAGGCCCTG+GGG - Chr7:91249841-91249860 MsG0780041465.01.T01:intron 60.0%
! GCTGCATTGGCCATACAGCC+AGG - Chr7:91248964-91248983 MsG0780041465.01.T01:intron 60.0%
TGGAGGCCCTGGGGTTGAAC+TGG - Chr7:91249850-91249869 MsG0780041465.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 91246439 91251779 91246439 ID=MsG0780041465.01;Name=MsG0780041465.01
Chr7 mRNA 91246439 91251779 91246439 ID=MsG0780041465.01.T01;Parent=MsG0780041465.01;Name=MsG0780041465.01.T01;_AED=0.38;_eAED=0.39;_QI=0|0|0|1|1|1|9|0|603
Chr7 exon 91251423 91251779 91251423 ID=MsG0780041465.01.T01:exon:18507;Parent=MsG0780041465.01.T01
Chr7 exon 91250915 91250947 91250915 ID=MsG0780041465.01.T01:exon:18506;Parent=MsG0780041465.01.T01
Chr7 exon 91250442 91250524 91250442 ID=MsG0780041465.01.T01:exon:18505;Parent=MsG0780041465.01.T01
Chr7 exon 91250244 91250316 91250244 ID=MsG0780041465.01.T01:exon:18504;Parent=MsG0780041465.01.T01
Chr7 exon 91249658 91249829 91249658 ID=MsG0780041465.01.T01:exon:18503;Parent=MsG0780041465.01.T01
Chr7 exon 91249300 91249562 91249300 ID=MsG0780041465.01.T01:exon:18502;Parent=MsG0780041465.01.T01
Chr7 exon 91248105 91248442 91248105 ID=MsG0780041465.01.T01:exon:18501;Parent=MsG0780041465.01.T01
Chr7 exon 91247205 91247562 91247205 ID=MsG0780041465.01.T01:exon:18500;Parent=MsG0780041465.01.T01
Chr7 exon 91246439 91246573 91246439 ID=MsG0780041465.01.T01:exon:18499;Parent=MsG0780041465.01.T01
Chr7 CDS 91251423 91251779 91251423 ID=MsG0780041465.01.T01:cds;Parent=MsG0780041465.01.T01
Chr7 CDS 91250915 91250947 91250915 ID=MsG0780041465.01.T01:cds;Parent=MsG0780041465.01.T01
Chr7 CDS 91250442 91250524 91250442 ID=MsG0780041465.01.T01:cds;Parent=MsG0780041465.01.T01
Chr7 CDS 91250244 91250316 91250244 ID=MsG0780041465.01.T01:cds;Parent=MsG0780041465.01.T01
Chr7 CDS 91249658 91249829 91249658 ID=MsG0780041465.01.T01:cds;Parent=MsG0780041465.01.T01
Chr7 CDS 91249300 91249562 91249300 ID=MsG0780041465.01.T01:cds;Parent=MsG0780041465.01.T01
Chr7 CDS 91248105 91248442 91248105 ID=MsG0780041465.01.T01:cds;Parent=MsG0780041465.01.T01
Chr7 CDS 91247205 91247562 91247205 ID=MsG0780041465.01.T01:cds;Parent=MsG0780041465.01.T01
Chr7 CDS 91246439 91246573 91246439 ID=MsG0780041465.01.T01:cds;Parent=MsG0780041465.01.T01
Gene Sequence

>MsG0780041465.01.T01

ATGCCAGTTGATGATTCCGTCGACGAACTCGATAGCTACATGTATCAAACTGTTGGGCATCAAATTATCATCAAATATGCTGAATGTATGGGATTGCCATTGTTCAGGAGGAGAATTCAAGGTTCATCAAAGCATCTTGAGCTTGGTTATAAAAGGACTCAAGGTGATGAAGTTGAAGATATGTATCTTTTGTTACGCCAAGTCAAAAGGCAGATTCCCTCTGTTACTGCTGTGTGTTCTGGTGCTATTGCATCTGATTATCAGAGACTTCGTGTCGAAAGTGTTTGTTCGAGGTTAGGTCTTGTTTCTTTGGCGTACTTATGGAAACAAGATCAATCCTTGCTCCTCAATGAAATGATTGCAAATGGAATAGTAGCTGTAACTGTGAAGGTAGCTGCCATGGGTTTGGATCCTGCAAAGCACTTGGGTAAAGAATTAGCCTCGTTAAATGCTTACTTGCATAAATTGAAAGAGTCATATGGAATAAATGTTTGCGGAGAAGGAGGGGAATATGAAACATTAACTCTTGATTGCCCGCTCTTTATTAATTTGGGATCTGTGTTTGAAGTGCATGACGGTCTAGAAAATTTCGAAGCCTTATGCAAGCCTCTTGATTACACTTATCCAATTGATGTCGTAGAACATAAATTTAACATTTCAAGAACAAATAACATGAACACATTCTCCATGTGTTGCTGGTTGCAAGATTCATGCAATGATTTGCAGGAAGATTTAATGATTATTTTGAGGAAAATTGAATCGCAACTAGCAGCGTTTGATTTTGGCTGGGAGAATGTACTCTATATACACCTTTACATCGATGACATGAATAAGTTCTCTGAGGCAAACGAGACATATGTGAAGTTTATAACACAGGAGAGGTGCCCATTTGGCGTACCATCTCGAAGTACAGTTGAAATGCCTCTACTTGAGATGGATTTTAGTAGAGCATATGTGAAGTTTTGGTTGCAAATAATAAAGGCAACCTTGCATGAGGGTATACTTCACATGGCTGGTCAACTGGGGCTTGACCCTCCTACCATGAATCTTTGCAGTGGAGGCCCTGGGGTTGAACTGGAACAGGCACTAAAAAACAGTGAAGCAGTGGCAAAATCTTTTAACTGTTCAATATCGACATCTGCAGTTGGTTTTGTTATTTACTGTTCTAAAAATATCACTTTACTGGAGAGACTCGATATCGAGAAGAAACAAGAAACAATCCTCAGACAAATGAAGATAGCTGAATTACAGGAAGGCAAAAAGTGCAAAACACTAGAACCCATATTCCTTTATGTCCTTGTTCCTGATCTACCAAAAAGTGCATATGTTGAAGTGAAGCCCATTCTTTATGTCGAGGATGGTGCAGATGTAGAAATTGAGACCATCATGGAAAGATCTTGTTCAAAGACATCATGTTATTGGGGTTTCAAGCACGAAAGTTGGCATGATTCTTGCTTTCAGAAATGTGTGATTCCCGGAAAGCTATGTGCCATTATATTGTCAATCACAAGTGTTCTGGCTGCAAAGATATCTCCTGATTCTTTGCCTACTGATAATGTCAATAATGATGGTCAATATTCTCTACCTAAATCACGAATGGAGCAGTTATCAAAGTTCTGCATTTATCTTCTTGACAAAGTTCTAATAGATAACGACTTTGCCTGGGAAGATATAATGAGTTTGAGGTTCTACATCCCAGTAAGCCTTCAAATGTCAGTGGAGCTGATACAGCCTATGTTCTGCAATGCACTTTTTGAACTTTCTCAAATAAGTCAGAGGGAGTTTAAAATTGTGAGCCAATCTTCAACATAG
Protein sequence

>MsG0780041465.01.T01

MPVDDSVDELDSYMYQTVGHQIIIKYAECMGLPLFRRRIQGSSKHLELGYKRTQGDEVEDMYLLLRQVKRQIPSVTAVCSGAIASDYQRLRVESVCSRLGLVSLAYLWKQDQSLLLNEMIANGIVAVTVKVAAMGLDPAKHLGKELASLNAYLHKLKESYGINVCGEGGEYETLTLDCPLFINLGSVFEVHDGLENFEALCKPLDYTYPIDVVEHKFNISRTNNMNTFSMCCWLQDSCNDLQEDLMIILRKIESQLAAFDFGWENVLYIHLYIDDMNKFSEANETYVKFITQERCPFGVPSRSTVEMPLLEMDFSRAYVKFWLQIIKATLHEGILHMAGQLGLDPPTMNLCSGGPGVELEQALKNSEAVAKSFNCSISTSAVGFVIYCSKNITLLERLDIEKKQETILRQMKIAELQEGKKCKTLEPIFLYVLVPDLPKSAYVEVKPILYVEDGADVEIETIMERSCSKTSCYWGFKHESWHDSCFQKCVIPGKLCAIILSITSVLAAKISPDSLPTDNVNNDGQYSLPKSRMEQLSKFCIYLLDKVLIDNDFAWEDIMSLRFYIPVSLQMSVELIQPMFCNALFELSQISQREFKIVSQSST*