AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041721.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041721.01.T01 MTR_7g116870 97.120 382 10 1 9 390 1 381 0.0 764
MsG0780041721.01.T01 MTR_8g028160 64.935 385 111 5 21 389 11 387 0.0 512
MsG0780041721.01.T01 MTR_1g030220 41.711 374 206 5 18 384 16 384 1.05e-103 312
MsG0780041721.01.T01 MTR_1g030340 42.424 396 209 7 9 389 1 392 2.05e-101 306
MsG0780041721.01.T01 MTR_8g089805 41.953 379 209 5 5 377 7 380 2.38e-100 303
MsG0780041721.01.T01 MTR_7g033165 41.573 356 193 4 38 384 29 378 1.48e-98 298
MsG0780041721.01.T01 MTR_7g087190 41.207 381 209 8 17 384 13 391 6.84e-98 297
MsG0780041721.01.T01 MTR_1g030268 41.753 388 207 9 5 384 6 382 8.61e-97 294
MsG0780041721.01.T01 MTR_1g030230 41.711 374 206 5 18 384 8 376 1.60e-96 293
MsG0780041721.01.T01 MTR_7g033150 39.583 384 204 7 23 386 11 386 1.74e-96 293
MsG0780041721.01.T01 MTR_1g030275 42.246 374 202 6 18 384 15 381 2.50e-96 293
MsG0780041721.01.T01 MTR_7g033155 40.107 374 192 5 38 386 34 400 6.30e-95 290
MsG0780041721.01.T01 MTR_7g113860 39.503 362 204 6 24 378 15 368 1.69e-84 262
MsG0780041721.01.T01 MTR_7g113860 38.095 378 222 6 9 378 1 374 1.30e-83 260
MsG0780041721.01.T01 MTR_6g007090 36.224 392 220 6 9 384 1 378 5.42e-80 251
MsG0780041721.01.T01 MTR_1g082390 38.482 369 211 6 13 375 8 366 1.30e-79 249
MsG0780041721.01.T01 MTR_8g038680 37.403 385 213 10 15 384 1 372 2.55e-76 241
MsG0780041721.01.T01 MTR_6g007095 36.579 380 210 5 18 379 9 375 8.37e-76 248
MsG0780041721.01.T01 MTR_6g007095 33.526 346 192 6 50 384 378 696 1.21e-57 200
MsG0780041721.01.T01 MTR_7g111780 41.061 358 179 12 37 384 29 364 1.41e-75 239
MsG0780041721.01.T01 MTR_6g007100 36.461 373 211 6 18 384 9 361 1.16e-74 236
MsG0780041721.01.T01 MTR_1g030265 41.060 302 166 5 90 384 53 349 1.90e-73 233
MsG0780041721.01.T01 MTR_7g033165 41.606 274 149 3 38 302 29 300 5.20e-73 230
MsG0780041721.01.T01 MTR_8g089805 40.273 293 168 4 91 377 21 312 3.70e-71 226
MsG0780041721.01.T01 MTR_1g030268 41.503 306 163 7 5 302 6 303 3.24e-70 224
MsG0780041721.01.T01 MTR_7g113860 37.037 297 177 4 88 378 8 300 6.19e-63 204
MsG0780041721.01.T01 MTR_2g015590 35.753 372 209 12 23 380 14 369 1.21e-62 206
MsG0780041721.01.T01 MTR_2g015580 35.829 374 205 13 22 378 27 382 3.11e-59 197
MsG0780041721.01.T01 MTR_8g012540 34.571 350 201 10 15 349 1 337 1.82e-57 191
MsG0780041721.01.T01 MTR_2g015630 35.632 348 189 13 47 376 36 366 2.22e-56 189
MsG0780041721.01.T01 MTR_2g015650 36.723 354 191 12 40 377 29 365 3.91e-56 189
MsG0780041721.01.T01 MTR_3g463960 33.807 352 203 10 40 376 42 378 5.69e-53 181
MsG0780041721.01.T01 MTR_3g463950 33.807 352 203 10 40 376 42 378 5.69e-53 181
MsG0780041721.01.T01 MTR_3g463970 33.807 352 203 10 40 376 42 378 5.69e-53 181
MsG0780041721.01.T01 MTR_3g463940 33.807 352 203 10 40 376 42 378 5.69e-53 181
MsG0780041721.01.T01 MTR_2g043980 32.898 383 212 12 9 377 1 352 1.07e-52 179
MsG0780041721.01.T01 MTR_7g111780 38.732 284 148 8 106 384 3 265 1.09e-52 176
MsG0780041721.01.T01 MTR_3g463930 34.262 359 199 12 40 376 42 385 3.75e-52 179
MsG0780041721.01.T01 MTR_3g069780 33.967 368 207 13 32 381 20 369 1.82e-51 176
MsG0780041721.01.T01 MTR_0029s0050 33.613 357 198 10 32 376 20 349 2.69e-51 176
MsG0780041721.01.T01 MTR_2g079090 33.613 357 198 10 32 376 20 349 3.98e-51 175
MsG0780041721.01.T01 MTR_3g438030 33.696 368 208 13 32 381 20 369 5.16e-51 175
MsG0780041721.01.T01 MTR_2g079080 33.613 357 198 10 32 376 20 349 5.58e-51 175
MsG0780041721.01.T01 MTR_3g448360 33.422 377 215 13 18 376 3 361 5.86e-51 175
MsG0780041721.01.T01 MTR_0029s0100 33.613 357 198 10 32 376 20 349 1.11e-50 174
MsG0780041721.01.T01 MTR_2g015670 34.770 348 194 11 40 378 29 352 2.87e-50 173
MsG0780041721.01.T01 MTR_3g069520 34.078 358 202 13 40 381 28 367 6.58e-50 172
MsG0780041721.01.T01 MTR_4g104240 29.639 388 240 12 7 380 3 371 1.48e-47 166
MsG0780041721.01.T01 MTR_8g031420 29.787 376 225 11 11 374 2 350 2.47e-42 152
MsG0780041721.01.T01 MTR_8g022810 31.579 380 208 15 4 362 1 349 4.60e-42 152
MsG0780041721.01.T01 MTR_2g015590 32.653 294 178 9 22 302 13 299 2.19e-38 141
MsG0780041721.01.T01 MTR_2g044100 30.484 351 209 11 36 374 37 364 3.54e-38 142
MsG0780041721.01.T01 MTR_5g009100 26.989 352 216 9 44 381 48 372 5.26e-38 141
MsG0780041721.01.T01 MTR_8g031390 28.198 344 207 9 42 374 37 351 8.22e-38 140
MsG0780041721.01.T01 MTR_8g031430 29.532 342 202 10 42 372 37 350 2.61e-37 139
MsG0780041721.01.T01 MTR_8g031400 28.529 340 212 9 42 374 37 352 1.66e-36 136
MsG0780041721.01.T01 MTR_8g022790 31.700 347 188 10 42 374 37 348 1.72e-36 136
MsG0780041721.01.T01 MTR_8g079050 28.307 378 222 14 16 371 10 360 3.13e-36 136
MsG0780041721.01.T01 MTR_5g074270 30.707 368 196 17 40 384 31 362 1.67e-34 131
MsG0780041721.01.T01 MTR_2g033920 28.000 350 210 9 41 375 34 356 3.64e-33 127
MsG0780041721.01.T01 MTR_1g060490 28.615 325 195 10 41 359 36 329 6.85e-33 126
MsG0780041721.01.T01 MTR_3g024510 27.714 350 213 10 44 380 40 362 5.02e-32 124
MsG0780041721.01.T01 MTR_3g098270 27.493 371 227 10 17 371 9 353 3.32e-31 122
MsG0780041721.01.T01 MTR_2g043990 31.803 305 166 10 9 301 63 337 4.29e-31 121
MsG0780041721.01.T01 MTR_2g033930 27.056 377 233 13 15 375 1 351 7.41e-31 121
MsG0780041721.01.T01 MTR_4g122200 26.720 378 232 10 13 375 9 356 2.54e-30 120
MsG0780041721.01.T01 MTR_8g031390 27.483 302 183 8 42 332 37 313 8.81e-30 117
MsG0780041721.01.T01 MTR_0565s0010 26.221 389 222 13 15 379 9 356 1.22e-29 118
MsG0780041721.01.T01 MTR_2g084585 27.151 372 232 11 9 369 1 344 1.40e-29 117
MsG0780041721.01.T01 MTR_3g005650 26.260 377 229 11 21 383 11 352 1.94e-29 117
MsG0780041721.01.T01 MTR_3g052580 26.225 347 222 10 42 376 28 352 2.73e-29 117
MsG0780041721.01.T01 MTR_3g052580 26.211 351 217 11 42 376 27 351 2.82e-29 117
MsG0780041721.01.T01 MTR_4g035353 26.882 372 229 13 19 375 8 351 3.61e-29 116
MsG0780041721.01.T01 MTR_8g087890 26.316 380 233 13 17 380 7 355 1.04e-28 115
MsG0780041721.01.T01 MTR_5g022630 28.367 349 209 12 42 375 43 365 1.13e-28 115
MsG0780041721.01.T01 MTR_7g116520 26.882 372 226 12 15 372 12 351 2.13e-28 114
MsG0780041721.01.T01 MTR_3g082830 29.254 335 200 15 42 364 38 347 3.75e-28 114
MsG0780041721.01.T01 MTR_1g060500 26.347 334 201 10 41 360 39 341 4.31e-28 113
MsG0780041721.01.T01 MTR_8g022810 32.927 246 136 9 4 233 1 233 4.98e-28 112
MsG0780041721.01.T01 MTR_1g025760 26.873 387 227 14 6 369 41 394 9.61e-28 113
MsG0780041721.01.T01 MTR_8g014910 26.975 367 231 12 9 364 2 342 1.29e-27 112
MsG0780041721.01.T01 MTR_5g087690 25.620 363 216 12 33 379 40 364 1.74e-27 112
MsG0780041721.01.T01 MTR_2g100620 26.844 339 214 10 42 369 31 346 2.01e-27 111
MsG0780041721.01.T01 MTR_3g052490 25.135 370 236 10 24 376 12 357 2.03e-27 112
MsG0780041721.01.T01 MTR_5g084790 26.844 339 203 13 42 364 32 341 2.44e-27 111
MsG0780041721.01.T01 MTR_1g025680 27.297 381 232 14 12 375 2 354 2.93e-27 112
MsG0780041721.01.T01 MTR_4g056280 26.946 334 209 9 42 364 30 339 4.29e-27 110
MsG0780041721.01.T01 MTR_2g461580 24.935 385 234 11 17 385 6 351 1.36e-26 109
MsG0780041721.01.T01 MTR_3g052480 24.932 369 227 13 24 371 13 352 1.68e-26 109
MsG0780041721.01.T01 MTR_3g464730 25.745 369 226 12 15 365 1 339 2.05e-26 108
MsG0780041721.01.T01 MTR_5g093090 26.629 353 214 11 42 376 28 353 2.06e-26 108
MsG0780041721.01.T01 MTR_3g435540 27.824 363 219 14 22 369 3 337 2.66e-26 108
MsG0780041721.01.T01 MTR_1g024890 26.849 365 226 11 22 372 12 349 3.24e-26 108
MsG0780041721.01.T01 MTR_8g075230 27.378 347 213 12 42 375 36 356 3.52e-26 108
MsG0780041721.01.T01 MTR_7g116570 26.420 352 216 12 41 376 33 357 3.67e-26 108
MsG0780041721.01.T01 MTR_1g025720 26.579 380 227 14 4 365 1 346 4.17e-26 108
MsG0780041721.01.T01 MTR_0009s0250 29.355 310 185 10 16 311 4 293 4.65e-26 107
MsG0780041721.01.T01 MTR_1g069175 28.010 382 222 13 13 372 2 352 5.26e-26 108
MsG0780041721.01.T01 MTR_4g087985 27.321 377 223 14 21 371 15 366 6.67e-26 107
MsG0780041721.01.T01 MTR_1g079540 25.876 371 232 13 22 376 11 354 7.69e-26 107
MsG0780041721.01.T01 MTR_1g082410 27.660 376 160 12 30 379 16 305 1.97e-25 105
MsG0780041721.01.T01 MTR_7g104220 26.994 326 198 12 43 360 43 336 3.41e-25 105
MsG0780041721.01.T01 MTR_4g019880 27.532 385 224 18 9 372 1 351 8.67e-25 104
MsG0780041721.01.T01 MTR_4g056160 27.679 336 203 11 42 362 27 337 9.59e-25 104
MsG0780041721.01.T01 MTR_8g075220 26.301 346 217 11 40 370 38 360 1.10e-24 104
MsG0780041721.01.T01 MTR_5g083040 26.667 330 208 12 42 358 32 340 1.21e-24 103
MsG0780041721.01.T01 MTR_1g092740 24.776 335 213 9 31 358 27 329 1.79e-24 103
MsG0780041721.01.T01 MTR_5g022640 27.095 358 201 15 42 375 43 364 2.83e-24 103
MsG0780041721.01.T01 MTR_7g116510 25.490 357 215 13 37 372 17 343 3.08e-24 102
MsG0780041721.01.T01 MTR_2g015080 25.858 379 218 16 12 360 7 352 3.35e-24 102
MsG0780041721.01.T01 MTR_1g025780 27.083 384 233 14 1 369 2 353 4.87e-24 102
MsG0780041721.01.T01 MTR_8g087870 26.273 373 210 12 9 363 1 326 6.56e-24 101
MsG0780041721.01.T01 MTR_1g025700 26.100 341 212 11 42 369 50 363 8.02e-24 102
MsG0780041721.01.T01 MTR_5g084750 24.471 331 209 12 42 358 30 333 1.44e-23 100
MsG0780041721.01.T01 MTR_3g114090 29.032 341 198 13 40 364 34 346 1.49e-23 100
MsG0780041721.01.T01 MTR_5g084770 24.779 339 213 12 42 365 28 339 2.19e-23 100
MsG0780041721.01.T01 MTR_7g116500 26.648 349 209 12 41 372 32 350 2.24e-23 100
MsG0780041721.01.T01 MTR_4g108690 25.723 346 217 11 38 369 22 341 2.77e-23 100
MsG0780041721.01.T01 MTR_1g092750 24.217 351 199 11 43 372 41 345 4.15e-23 99.8
MsG0780041721.01.T01 MTR_1g092760 25.588 340 207 13 43 372 40 343 4.59e-23 99.4
MsG0780041721.01.T01 MTR_5g078210 26.205 332 204 12 46 364 29 332 6.21e-23 99.0
MsG0780041721.01.T01 MTR_2g033920 28.520 277 168 7 41 302 34 295 6.44e-23 98.6
MsG0780041721.01.T01 MTR_1g025910 28.739 341 195 14 42 369 43 348 7.44e-23 99.4
MsG0780041721.01.T01 MTR_3g005660 25.414 362 234 9 34 382 28 366 9.66e-23 99.0
MsG0780041721.01.T01 MTR_3g114120 28.242 347 197 13 42 369 47 360 1.12e-22 98.6
MsG0780041721.01.T01 MTR_3g023220 24.551 334 200 10 43 363 34 328 1.73e-22 97.8
MsG0780041721.01.T01 MTR_6g021530 24.425 348 219 10 46 376 33 353 2.22e-21 94.7
MsG0780041721.01.T01 MTR_7g008060 25.789 380 219 14 10 372 4 337 2.27e-21 94.7
MsG0780041721.01.T01 MTR_3g021460 24.737 380 227 12 17 380 6 342 5.26e-21 93.6
MsG0780041721.01.T01 MTR_8g074570 25.916 382 234 15 10 371 4 356 1.22e-20 92.8
MsG0780041721.01.T01 MTR_8g075200 25.073 343 218 11 40 369 39 355 1.37e-20 93.2
MsG0780041721.01.T01 MTR_1g079530 25.722 381 227 18 20 381 5 348 3.44e-20 91.3
MsG0780041721.01.T01 MTR_2g017925 27.596 337 196 15 43 368 34 333 2.68e-19 89.0
MsG0780041721.01.T01 MTR_1g060520 23.739 337 170 12 41 360 39 305 3.79e-19 87.8
MsG0780041721.01.T01 MTR_2g017965 25.373 335 207 10 43 365 34 337 3.83e-19 88.6
MsG0780041721.01.T01 MTR_2g017955 24.873 394 238 14 17 389 13 369 4.40e-19 88.2
MsG0780041721.01.T01 MTR_1g092690 23.148 324 207 12 43 358 52 341 9.94e-19 87.0
MsG0780041721.01.T01 MTR_5g093090 26.715 277 179 8 42 305 28 293 2.95e-18 85.1
MsG0780041721.01.T01 MTR_5g074210 31.429 175 99 6 211 384 64 218 5.26e-18 82.4
MsG0780041721.01.T01 MTR_8g074560 26.053 380 221 15 20 371 5 352 9.01e-18 84.3
MsG0780041721.01.T01 MTR_5g078210 26.667 270 171 9 46 302 29 284 5.04e-17 81.6
MsG0780041721.01.T01 MTR_2g017875 23.699 346 216 13 43 374 35 346 5.95e-17 82.0
MsG0780041721.01.T01 MTR_1g030262 50.000 76 38 0 18 93 12 87 1.07e-16 75.5
MsG0780041721.01.T01 MTR_0127s0040 23.482 247 161 5 144 382 8 234 1.61e-16 78.6
MsG0780041721.01.T01 MTR_1108s0010 24.889 225 139 5 143 364 1 198 7.40e-16 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041721.01.T01 AT4G01130 62.895 380 137 2 9 384 1 380 1.17e-177 499
MsG0780041721.01.T01 AT4G01130 63.423 298 105 2 9 302 1 298 1.94e-136 393
MsG0780041721.01.T01 AT4G01130 63.265 294 104 1 95 384 1 294 5.12e-135 388
MsG0780041721.01.T01 AT3G26430 41.489 376 212 5 16 384 4 378 1.60e-99 301
MsG0780041721.01.T01 AT5G14450 40.000 380 209 7 21 387 16 389 1.84e-96 293
MsG0780041721.01.T01 AT1G67830 42.647 340 188 4 38 371 26 364 1.12e-93 285
MsG0780041721.01.T01 AT1G54790 38.830 376 214 6 14 381 7 374 1.97e-83 259
MsG0780041721.01.T01 AT1G54790 37.135 377 223 6 15 381 1 373 3.21e-77 244
MsG0780041721.01.T01 AT1G56670 36.554 383 215 9 11 384 8 371 1.19e-76 242
MsG0780041721.01.T01 AT3G27950 36.292 383 215 8 17 386 6 372 2.73e-75 238
MsG0780041721.01.T01 AT1G09390 35.356 379 219 8 14 384 8 368 4.33e-73 233
MsG0780041721.01.T01 AT1G54790 35.484 403 220 9 15 381 1 399 8.80e-72 230
MsG0780041721.01.T01 AT3G05180 36.919 344 206 5 39 375 33 372 2.04e-70 226
MsG0780041721.01.T01 AT3G62280 36.070 341 191 6 43 376 37 357 5.05e-62 204
MsG0780041721.01.T01 AT1G28580 33.419 389 215 13 15 381 10 376 1.39e-59 198
MsG0780041721.01.T01 AT1G31550 35.677 384 200 14 19 380 15 373 2.64e-59 197
MsG0780041721.01.T01 AT5G45910 33.770 382 222 9 15 378 3 371 3.63e-59 196
MsG0780041721.01.T01 AT1G28600 34.694 392 208 14 9 378 1 366 6.83e-59 196
MsG0780041721.01.T01 AT1G31550 35.509 383 199 14 19 380 15 370 1.15e-57 193
MsG0780041721.01.T01 AT2G27360 36.126 382 207 11 16 378 7 370 2.96e-57 192
MsG0780041721.01.T01 AT1G28590 34.177 395 213 13 9 380 4 374 3.05e-57 192
MsG0780041721.01.T01 AT1G28640 33.247 388 222 13 13 380 3 373 1.42e-56 190
MsG0780041721.01.T01 AT1G28650 33.588 393 222 13 9 380 1 375 2.24e-56 189
MsG0780041721.01.T01 AT1G28610 32.808 381 223 11 14 378 3 366 5.40e-54 183
MsG0780041721.01.T01 AT1G28670 33.075 387 225 13 13 380 3 374 6.21e-53 181
MsG0780041721.01.T01 AT1G56670 36.545 301 171 8 11 302 8 297 2.67e-52 176
MsG0780041721.01.T01 AT1G28570 33.247 385 216 15 15 378 6 370 2.91e-52 179
MsG0780041721.01.T01 AT1G28660 32.648 389 223 14 13 380 3 373 3.44e-51 176
MsG0780041721.01.T01 AT1G28660 32.648 389 222 15 13 380 3 372 8.52e-50 172
MsG0780041721.01.T01 AT3G48460 29.771 393 226 14 7 378 7 370 1.04e-45 161
MsG0780041721.01.T01 AT3G62280 36.293 259 146 5 43 294 37 283 3.79e-44 155
MsG0780041721.01.T01 AT1G28580 32.143 308 179 11 85 380 5 294 4.00e-41 147
MsG0780041721.01.T01 AT3G14225 30.029 343 209 9 42 371 37 361 8.83e-36 135
MsG0780041721.01.T01 AT5G40990 29.598 348 200 10 42 371 37 357 1.53e-35 134
MsG0780041721.01.T01 AT1G06990 29.429 350 195 12 40 369 35 352 6.61e-35 132
MsG0780041721.01.T01 AT1G53920 27.390 387 232 11 9 373 7 366 9.45e-35 132
MsG0780041721.01.T01 AT3G14225 29.480 346 203 10 42 371 37 357 1.87e-34 131
MsG0780041721.01.T01 AT5G15720 30.108 372 205 13 30 376 14 355 2.96e-33 127
MsG0780041721.01.T01 AT5G22810 29.118 340 207 11 42 369 34 351 4.06e-33 127
MsG0780041721.01.T01 AT4G10950 26.286 350 221 11 42 379 71 395 1.47e-32 127
MsG0780041721.01.T01 AT1G71691 27.701 361 217 9 27 374 41 370 1.75e-32 126
MsG0780041721.01.T01 AT2G23540 28.947 380 218 14 18 371 18 371 2.01e-32 126
MsG0780041721.01.T01 AT3G50400 28.649 370 214 14 33 380 25 366 4.37e-32 125
MsG0780041721.01.T01 AT2G31540 27.895 380 216 13 9 364 1 346 1.53e-30 120
MsG0780041721.01.T01 AT1G58430 28.824 340 201 12 40 364 33 346 3.42e-30 119
MsG0780041721.01.T01 AT4G10950 26.000 350 218 12 42 379 71 391 8.25e-30 119
MsG0780041721.01.T01 AT2G42990 26.796 362 215 14 21 365 10 338 8.74e-30 118
MsG0780041721.01.T01 AT1G53940 28.280 343 211 11 42 371 39 359 1.13e-29 118
MsG0780041721.01.T01 AT1G29670 28.080 349 210 12 44 379 34 354 3.81e-29 116
MsG0780041721.01.T01 AT5G08460 27.132 387 235 14 9 375 14 373 4.00e-29 117
MsG0780041721.01.T01 AT5G41890 28.142 366 216 13 29 371 18 359 4.74e-29 116
MsG0780041721.01.T01 AT1G28570 32.710 214 114 7 174 380 19 209 7.04e-29 112
MsG0780041721.01.T01 AT1G29670 28.000 350 211 12 44 380 102 423 8.48e-29 117
MsG0780041721.01.T01 AT1G71120 26.934 349 201 12 42 372 31 343 9.35e-29 115
MsG0780041721.01.T01 AT5G03610 28.280 343 198 12 43 372 44 351 9.75e-29 115
MsG0780041721.01.T01 AT1G53990 27.988 343 205 11 42 371 35 348 1.67e-28 115
MsG0780041721.01.T01 AT4G26790 26.100 341 217 11 40 369 27 343 2.85e-28 114
MsG0780041721.01.T01 AT4G26790 26.100 341 217 11 40 369 27 343 2.85e-28 114
MsG0780041721.01.T01 AT2G30310 27.807 374 223 14 9 364 1 345 4.08e-28 114
MsG0780041721.01.T01 AT1G28570 32.710 214 114 7 174 380 110 300 4.37e-28 112
MsG0780041721.01.T01 AT2G24560 27.248 367 224 11 9 359 1 340 4.39e-28 114
MsG0780041721.01.T01 AT2G04570 27.457 346 210 15 42 373 28 346 1.73e-27 112
MsG0780041721.01.T01 AT1G54030 29.254 335 175 14 41 361 51 337 3.06e-27 112
MsG0780041721.01.T01 AT5G03980 25.895 363 207 14 9 365 1 307 3.19e-27 110
MsG0780041721.01.T01 AT1G71691 29.310 290 178 8 27 307 41 312 8.19e-26 106
MsG0780041721.01.T01 AT2G30220 27.901 362 217 14 19 364 11 344 9.55e-26 107
MsG0780041721.01.T01 AT3G16370 26.801 347 214 13 42 374 30 350 1.27e-25 106
MsG0780041721.01.T01 AT1G75880 25.397 378 237 12 12 370 17 368 1.74e-25 106
MsG0780041721.01.T01 AT1G59406 26.203 374 226 14 14 370 2 342 2.08e-25 105
MsG0780041721.01.T01 AT1G59030 26.203 374 226 14 14 370 2 342 2.08e-25 105
MsG0780041721.01.T01 AT1G58725 26.203 374 226 14 14 370 2 342 2.08e-25 105
MsG0780041721.01.T01 AT3G14820 28.531 354 184 15 42 369 32 342 4.20e-25 105
MsG0780041721.01.T01 AT1G54020 27.451 357 212 11 23 369 12 331 4.74e-25 105
MsG0780041721.01.T01 AT5G15720 28.105 306 173 9 89 376 48 324 5.15e-25 104
MsG0780041721.01.T01 AT1G75880 25.849 383 228 13 12 370 17 367 7.41e-25 105
MsG0780041721.01.T01 AT4G28780 28.249 354 207 14 41 376 30 354 8.56e-25 104
MsG0780041721.01.T01 AT5G45670 27.463 335 202 14 44 364 31 338 9.28e-25 104
MsG0780041721.01.T01 AT2G03980 28.198 344 206 14 37 368 38 352 9.45e-25 104
MsG0780041721.01.T01 AT2G03980 28.198 344 206 14 37 368 38 352 9.45e-25 104
MsG0780041721.01.T01 AT2G03980 28.198 344 206 14 37 368 38 352 9.45e-25 104
MsG0780041721.01.T01 AT2G03980 28.198 344 206 14 37 368 38 352 9.45e-25 104
MsG0780041721.01.T01 AT5G03820 28.042 378 211 18 19 369 6 349 1.15e-24 103
MsG0780041721.01.T01 AT1G75890 28.342 374 213 15 21 373 22 361 1.30e-24 103
MsG0780041721.01.T01 AT1G75890 27.957 372 217 14 21 373 51 390 1.93e-24 103
MsG0780041721.01.T01 AT1G75900 27.273 341 210 12 42 370 43 357 2.31e-24 103
MsG0780041721.01.T01 AT5G45950 26.923 338 200 13 42 365 40 344 2.74e-24 103
MsG0780041721.01.T01 AT1G29660 25.501 349 220 10 44 379 34 355 2.81e-24 103
MsG0780041721.01.T01 AT5G03820 28.042 378 211 18 19 369 34 377 3.02e-24 103
MsG0780041721.01.T01 AT5G03600 27.105 380 218 16 11 375 17 352 3.33e-24 102
MsG0780041721.01.T01 AT1G75890 27.419 372 219 13 21 364 22 370 3.39e-24 103
MsG0780041721.01.T01 AT3G04290 27.066 351 205 13 41 372 28 346 3.50e-24 102
MsG0780041721.01.T01 AT5G63170 26.975 367 201 12 15 360 1 321 3.57e-24 102
MsG0780041721.01.T01 AT5G45960 27.246 345 198 13 36 358 41 354 8.73e-24 102
MsG0780041721.01.T01 AT5G15720 29.592 294 171 10 30 302 14 292 1.12e-23 100
MsG0780041721.01.T01 AT3G53100 25.067 371 231 13 15 369 4 343 1.14e-23 101
MsG0780041721.01.T01 AT1G53940 28.421 285 172 10 42 313 39 304 1.70e-23 99.8
MsG0780041721.01.T01 AT1G71250 26.087 345 220 11 42 375 41 361 1.72e-23 100
MsG0780041721.01.T01 AT4G18970 24.719 356 231 12 44 386 30 361 3.13e-23 100
MsG0780041721.01.T01 AT1G71691 25.253 297 182 7 88 374 3 269 3.14e-23 98.6
MsG0780041721.01.T01 AT4G18970 24.719 356 231 13 44 386 30 361 3.14e-23 100
MsG0780041721.01.T01 AT5G33370 26.301 346 214 13 41 372 29 347 4.57e-23 99.8
MsG0780041721.01.T01 AT2G24560 27.964 329 207 9 9 321 1 315 5.88e-23 98.6
MsG0780041721.01.T01 AT1G75930 27.027 370 217 13 21 371 6 341 1.01e-22 98.6
MsG0780041721.01.T01 AT2G19060 27.528 356 205 15 36 376 24 341 1.21e-22 98.2
MsG0780041721.01.T01 AT3G09930 26.686 341 203 14 43 370 40 346 1.89e-22 97.8
MsG0780041721.01.T01 AT3G09930 26.686 341 203 14 43 370 40 346 1.89e-22 97.8
MsG0780041721.01.T01 AT1G75920 27.224 371 205 15 23 369 6 335 2.47e-22 97.4
MsG0780041721.01.T01 AT5G03810 25.882 340 209 12 42 369 37 345 3.94e-22 97.1
MsG0780041721.01.T01 AT5G03600 27.089 347 195 15 43 375 15 317 5.52e-22 95.9
MsG0780041721.01.T01 AT5G42170 26.163 344 211 13 43 373 51 364 5.55e-22 96.7
MsG0780041721.01.T01 AT5G18430 26.190 378 224 15 18 376 12 353 1.20e-21 95.5
MsG0780041721.01.T01 AT1G20135 23.118 372 219 11 12 364 3 326 1.24e-21 95.1
MsG0780041721.01.T01 AT2G40250 23.599 339 218 13 42 364 36 349 1.56e-21 95.1
MsG0780041721.01.T01 AT1G20120 25.588 340 212 12 40 365 76 388 2.53e-21 95.1
MsG0780041721.01.T01 AT1G74460 26.087 368 219 16 19 369 6 337 4.19e-21 94.0
MsG0780041721.01.T01 AT1G33811 23.990 396 251 14 15 386 1 370 8.47e-21 93.2
MsG0780041721.01.T01 AT5G37690 25.680 331 207 11 46 364 31 334 1.37e-20 92.4
MsG0780041721.01.T01 AT1G54030 34.783 207 96 10 41 234 51 231 1.51e-20 91.7
MsG0780041721.01.T01 AT1G54000 25.781 384 216 19 9 369 2 339 2.10e-20 92.4
MsG0780041721.01.T01 AT1G28600 32.420 219 116 9 9 210 1 204 3.11e-20 89.0
MsG0780041721.01.T01 AT1G54010 25.464 377 226 14 9 369 2 339 3.23e-20 91.7
MsG0780041721.01.T01 AT2G19050 25.434 346 207 12 44 376 33 340 3.42e-20 91.3
MsG0780041721.01.T01 AT1G75920 26.911 327 181 13 60 369 22 307 8.05e-20 89.7
MsG0780041721.01.T01 AT1G28610 30.769 208 127 6 14 210 3 204 1.17e-19 87.8
MsG0780041721.01.T01 AT1G20130 24.501 351 215 13 42 370 204 526 1.40e-19 90.9
MsG0780041721.01.T01 AT1G20130 24.501 351 215 13 42 370 184 506 1.95e-19 90.5
MsG0780041721.01.T01 AT1G58520 25.770 357 208 15 31 370 19 335 8.61e-19 87.0
MsG0780041721.01.T01 AT1G58525 25.770 357 208 15 31 370 19 335 8.61e-19 87.0
MsG0780041721.01.T01 AT3G43570 23.450 371 211 13 14 370 2 313 1.14e-18 86.3
MsG0780041721.01.T01 AT2G36325 24.419 344 209 12 43 372 48 354 1.20e-18 87.0
MsG0780041721.01.T01 AT1G75920 26.166 386 205 16 23 369 1 345 1.54e-18 86.7
MsG0780041721.01.T01 AT1G23500 24.852 338 213 11 42 371 35 339 2.30e-18 85.9
MsG0780041721.01.T01 AT2G19010 25.356 351 201 12 44 376 32 339 4.15e-18 85.1
MsG0780041721.01.T01 AT2G19010 25.071 351 202 11 44 376 62 369 5.72e-18 85.1
MsG0780041721.01.T01 AT3G43550 26.797 306 186 12 14 302 2 286 1.03e-17 83.2
MsG0780041721.01.T01 AT4G30140 26.239 343 206 13 44 376 35 340 1.05e-17 84.0
MsG0780041721.01.T01 AT2G31550 25.728 206 125 5 167 364 20 205 1.29e-17 81.6
MsG0780041721.01.T01 AT1G20132 24.927 341 209 13 42 365 61 371 1.74e-17 83.6
MsG0780041721.01.T01 AT3G14220 25.369 339 209 10 43 371 33 337 1.75e-17 83.6
MsG0780041721.01.T01 AT3G14210 26.437 348 206 13 35 368 29 340 6.12e-17 82.0
MsG0780041721.01.T01 AT1G75910 25.434 346 206 14 40 369 26 335 9.72e-17 81.3
MsG0780041721.01.T01 AT5G37690 24.848 330 203 12 46 364 31 326 5.34e-16 79.0
MsG0780041721.01.T01 AT5G55050 26.796 362 219 16 35 376 32 367 6.21e-16 79.0
MsG0780041721.01.T01 AT5G33370 25.352 284 184 11 41 310 29 298 1.54e-15 77.4
MsG0780041721.01.T01 AT2G19050 26.172 256 161 8 44 289 33 270 2.01e-14 73.6
MsG0780041721.01.T01 AT1G54020 24.199 281 173 8 93 369 1 245 1.88e-11 64.7
MsG0780041721.01.T01 AT1G54020 24.199 281 173 8 93 369 1 245 1.88e-11 64.7
MsG0780041721.01.T01 AT1G54020 24.199 281 173 8 93 369 1 245 1.88e-11 64.7

Find 98 sgRNAs with CRISPR-Local

Find 159 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAACCTATGCTATTCTTAA+TGG 0.135679 7:-94433054 MsG0780041721.01.T01:CDS
AGTTCAGACCTTGACGAATT+TGG 0.191181 7:-94433506 MsG0780041721.01.T01:CDS
CCTGCTGAATCTGGTCCTTA+TGG 0.213684 7:-94435146 MsG0780041721.01.T01:CDS
TCTTGGTGGGAGAACATTTA+TGG 0.217034 7:-94433588 MsG0780041721.01.T01:CDS
ATAAGTTACTCTTACTTTAA+TGG 0.231194 7:+94433726 None:intergenic
GTTTGATCATTAACAAATAT+TGG 0.243784 7:-94435424 MsG0780041721.01.T01:five_prime_UTR
GTATTTCCACAGTAAACTTT+AGG 0.285895 7:+94433180 None:intergenic
CATGCTTGTGTTGCCTTGTT+TGG 0.295105 7:-94435261 MsG0780041721.01.T01:CDS
GGTTGGAAGTGAAATCATTT+TGG 0.297243 7:+94433815 None:intergenic
CTGATCAGCTTCTTTAACTT+TGG 0.306393 7:+94434056 None:intergenic
AATACTTCTTTGTTTGTCAC+TGG 0.313550 7:-94434132 MsG0780041721.01.T01:CDS
GGAAATACAAAGGAGATAAA+TGG 0.320143 7:-94433165 MsG0780041721.01.T01:CDS
ATTCTGTCAGCTCAAGCTAT+TGG 0.321669 7:-94434249 MsG0780041721.01.T01:intron
GGAGATTCAAATTCAGATAC+TGG 0.325361 7:-94435188 MsG0780041721.01.T01:CDS
GTGACAAACAAAGAAGTATT+AGG 0.332102 7:+94434135 None:intergenic
GATCCTATTGATTGTAGATA+TGG 0.334553 7:+94434210 None:intergenic
CATTGTGATCTTCAACCTAT+AGG 0.348100 7:-94432997 MsG0780041721.01.T01:CDS
CTTCAAATGGATCAACCTAT+AGG 0.355948 7:+94432982 None:intergenic
TATATCTGGTGATGGAAGTT+TGG 0.358262 7:+94433870 None:intergenic
TATAAGCTTGCTTGCAGCTT+CGG 0.371154 7:+94433074 None:intergenic
TGGTTGCAAATTGTTTCATT+TGG 0.386261 7:+94434076 None:intergenic
ACAAAAGCATGTTGTGGATA+TGG 0.389909 7:-94433225 MsG0780041721.01.T01:CDS
AGCATCTGAGAGACTTTCTC+TGG 0.391718 7:+94433415 None:intergenic
AATGAACAATAATATATTCA+TGG 0.395938 7:+94435286 None:intergenic
AGATCACAATGTTCCTGAAA+TGG 0.396329 7:+94433009 None:intergenic
TATGAAACAGGTCTTCAATA+TGG 0.402022 7:-94433249 MsG0780041721.01.T01:intron
TTCCGGCATCCTACTTCTCA+TGG 0.414441 7:-94433350 MsG0780041721.01.T01:intron
CTTGTGTTGCCTTGTTTGGT+TGG 0.426360 7:-94435257 MsG0780041721.01.T01:CDS
AGTCCATATCTACAATCAAT+AGG 0.429091 7:-94434213 MsG0780041721.01.T01:CDS
AAGAAACAATGTTCTTCAAA+TGG 0.431144 7:+94432969 None:intergenic
ACTTCCAACCTAGCAGTCAT+TGG 0.432851 7:-94433802 MsG0780041721.01.T01:CDS
TTGAAGTAAGTCATTCCATA+AGG 0.437386 7:+94435131 None:intergenic
TCCCAACTCACATAGTTGTA+AGG 0.444412 7:+94433111 None:intergenic
CTTCCATCACCAGATATACT+TGG 0.446578 7:-94433865 MsG0780041721.01.T01:CDS
AGCTGAATAGCAAGGGAGAA+AGG 0.454745 7:+94434102 None:intergenic
ATACTTCTTTGTTTGTCACT+GGG 0.469378 7:-94434131 MsG0780041721.01.T01:CDS
ATTGTTATTATTAATTAACT+AGG 0.471647 7:+94432939 None:intergenic
TTGTAGGAGCTATATAATCT+TGG 0.478024 7:-94433605 MsG0780041721.01.T01:intron
TAATTAATAATAACAATTGA+AGG 0.479823 7:-94432933 MsG0780041721.01.T01:three_prime_UTR
CCAGCTGGCCGTGCTTCTGA+TGG 0.484411 7:-94435104 MsG0780041721.01.T01:CDS
CCTTGACGAATTTGGATGCA+TGG 0.485707 7:-94433498 MsG0780041721.01.T01:CDS
TACAACTATGTGAGTTGGGA+TGG 0.486217 7:-94433108 MsG0780041721.01.T01:CDS
CCCTTACAACTATGTGAGTT+GGG 0.488599 7:-94433112 MsG0780041721.01.T01:CDS
TGTTTGGTTGGTTTGAGTCA+AGG 0.490554 7:-94435245 MsG0780041721.01.T01:CDS
CCATCAGAAGCACGGCCAGC+TGG 0.492279 7:+94435104 None:intergenic
GGAAGTTCTACTAAGAATGA+AGG 0.495691 7:+94433536 None:intergenic
CAATGTTCCTGAAATGGAAA+AGG 0.495858 7:+94433015 None:intergenic
GGATGCCAATGTAGCATAGT+TGG 0.496579 7:+94434170 None:intergenic
TGTGCCAATGACTGCTAGGT+TGG 0.505293 7:+94433798 None:intergenic
ACCCTTACAACTATGTGAGT+TGG 0.506490 7:-94433113 MsG0780041721.01.T01:CDS
TAGGAGCTATATAATCTTGG+TGG 0.518098 7:-94433602 MsG0780041721.01.T01:CDS
AGGACGTGGATGTGATTTCA+AGG 0.520754 7:-94435225 MsG0780041721.01.T01:CDS
ACAACTATGTGAGTTGGGAT+GGG 0.528306 7:-94433107 MsG0780041721.01.T01:CDS
TCAAGGTCTGAACTATTATG+AGG 0.530045 7:+94433515 None:intergenic
AATGAAGGGTAGCACCCTAC+TGG 0.532982 7:+94433551 None:intergenic
TACTTAATCTTGCACCAGTA+GGG 0.541138 7:-94433565 MsG0780041721.01.T01:CDS
AAGCTTGCTTGCAGCTTCGG+TGG 0.542742 7:+94433077 None:intergenic
GAAATTTGTGAAACTACTTG+TGG 0.543071 7:+94433754 None:intergenic
AAGGACGTGAAACTAGTTTG+AGG 0.546372 7:-94432914 MsG0780041721.01.T01:three_prime_UTR
AAATTTGTGAAACTACTTGT+GGG 0.547709 7:+94433755 None:intergenic
TTCTTACAACAATGCAGTAG+TGG 0.550306 7:-94433474 MsG0780041721.01.T01:CDS
CAGCTGGCCGTGCTTCTGAT+GGG 0.550469 7:-94435103 MsG0780041721.01.T01:CDS
AGACTCGTGGTTGATTTCAT+CGG 0.553537 7:-94435080 MsG0780041721.01.T01:intron
TTTCCAAGTATATCTGGTGA+TGG 0.553970 7:+94433862 None:intergenic
GCTGAATAGCAAGGGAGAAA+GGG 0.557520 7:+94434103 None:intergenic
AACCATGAGAAGTAGGATGC+CGG 0.560111 7:+94433348 None:intergenic
CGATACCTACACTGTTCTGT+TGG 0.565280 7:-94433378 MsG0780041721.01.T01:CDS
CCATAAGGACCAGATTCAGC+AGG 0.567818 7:+94435146 None:intergenic
GTACTTAATCTTGCACCAGT+AGG 0.570862 7:-94433566 MsG0780041721.01.T01:CDS
CCCAACTCACATAGTTGTAA+GGG 0.576209 7:+94433112 None:intergenic
TGGAGCCAACTATGCTACAT+TGG 0.576891 7:-94434175 MsG0780041721.01.T01:CDS
TGTTCCTGAAATGGAAAAGG+AGG 0.581672 7:+94433018 None:intergenic
TTTGGTTGAGCTGAATAGCA+AGG 0.582254 7:+94434094 None:intergenic
TTCGATCCTAAAGTTTACTG+TGG 0.582562 7:-94433186 MsG0780041721.01.T01:CDS
AACCTAGCAGTCATTGGCAC+AGG 0.585417 7:-94433796 MsG0780041721.01.T01:CDS
TGACTCAAACCAACCAAACA+AGG 0.585659 7:+94435248 None:intergenic
GAAGTTCTACTAAGAATGAA+GGG 0.588435 7:+94433537 None:intergenic
GTGTTTGAACCATGAGAAGT+AGG 0.588802 7:+94433341 None:intergenic
CTAGCAGTCATTGGCACAGG+TGG 0.589232 7:-94433793 MsG0780041721.01.T01:CDS
GTTAAAGAAGCTGATCAGCA+AGG 0.598763 7:-94434051 MsG0780041721.01.T01:intron
GTTGGTTTGAGTCAAGGACG+TGG 0.601280 7:-94435239 MsG0780041721.01.T01:CDS
GCATGTTGTGGATATGGTGG+AGG 0.601305 7:-94433219 MsG0780041721.01.T01:CDS
TATGGTACAAAAGCATGTTG+TGG 0.602150 7:-94433231 MsG0780041721.01.T01:CDS
TTGGTTGAGCTGAATAGCAA+GGG 0.602445 7:+94434095 None:intergenic
AGATCCATTAAGAATAGCAT+AGG 0.606063 7:+94433050 None:intergenic
ACTTACTTCAATAAACCAGC+TGG 0.607541 7:-94435119 MsG0780041721.01.T01:CDS
AGGAGCTATATAATCTTGGT+GGG 0.609668 7:-94433601 MsG0780041721.01.T01:CDS
GATTCAAATTCAGATACTGG+TGG 0.612266 7:-94435185 MsG0780041721.01.T01:CDS
ATAGGATCTGATTATAAACA+TGG 0.613968 7:-94434195 MsG0780041721.01.T01:CDS
CACCTGTGCCAATGACTGCT+AGG 0.626922 7:+94433794 None:intergenic
TGCTTCTGATGGGAGACTCG+TGG 0.632440 7:-94435093 MsG0780041721.01.T01:CDS
AAGCTCCAACAGAACAGTGT+AGG 0.634682 7:+94433373 None:intergenic
CGAGTCTCCCATCAGAAGCA+CGG 0.640065 7:+94435096 None:intergenic
CCATGCATCCAAATTCGTCA+AGG 0.645133 7:+94433498 None:intergenic
TTTGTTAATGATCAAACACA+TGG 0.649485 7:+94435430 None:intergenic
AAAGCATGTTGTGGATATGG+TGG 0.654269 7:-94433222 MsG0780041721.01.T01:CDS
AGTTTACTGTGGAAATACAA+AGG 0.664418 7:-94433175 MsG0780041721.01.T01:CDS
AGTATTAGGAAGAAGCACAG+TGG 0.690045 7:+94434149 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAACAAAAATAAACATTAA+GGG + Chr7:94435042-94435061 None:intergenic 10.0%
!! ATTAGAATGTTAATATATTA+AGG + Chr7:94434397-94434416 None:intergenic 10.0%
!! TAATTAATAATAACAATTGA+AGG - Chr7:94435377-94435396 MsG0780041721.01.T01:five_prime_UTR 10.0%
!! TATAACAAAAATAAACATTA+AGG + Chr7:94435043-94435062 None:intergenic 10.0%
!!! ATTGTTATTATTAATTAACT+AGG + Chr7:94435374-94435393 None:intergenic 10.0%
!! AATGAACAATAATATATTCA+TGG + Chr7:94433027-94433046 None:intergenic 15.0%
!! ATATAAATCAACTTATTGAT+TGG - Chr7:94433476-94433495 MsG0780041721.01.T01:CDS 15.0%
!!! AAATAGTAAGTTGAAATTAA+CGG + Chr7:94433858-94433877 None:intergenic 15.0%
!!! AATCAATAAGTTGATTTATA+TGG + Chr7:94433477-94433496 None:intergenic 15.0%
!!! ATAATTATGATTTTTATTGC+AGG - Chr7:94433514-94433533 MsG0780041721.01.T01:CDS 15.0%
!!! ATTTCAACTTACTATTTTTA+TGG - Chr7:94433861-94433880 MsG0780041721.01.T01:CDS 15.0%
!!! TAATACTGTATTTATTTTCT+TGG + Chr7:94433888-94433907 None:intergenic 15.0%
!!! TAATTATGATTTTTATTGCA+GGG - Chr7:94433515-94433534 MsG0780041721.01.T01:CDS 15.0%
!!! TTATTTTTGTTATATGAAAC+AGG - Chr7:94435049-94435068 MsG0780041721.01.T01:intron 15.0%
!! ATAAGTTACTCTTACTTTAA+TGG + Chr7:94434587-94434606 None:intergenic 20.0%
!! ATTTATGACTGATAAAATAC+TGG + Chr7:94433803-94433822 None:intergenic 20.0%
!! GAATGTTAATATATTAAGGA+AGG + Chr7:94434393-94434412 None:intergenic 20.0%
!! GCTAAAATCTTGAAAATTAT+AGG - Chr7:94433601-94433620 MsG0780041721.01.T01:CDS 20.0%
!! GTTTGATCATTAACAAATAT+TGG - Chr7:94432886-94432905 MsG0780041721.01.T01:three_prime_UTR 20.0%
!! TGATTAGACACATAATTTAA+TGG - Chr7:94433987-94434006 MsG0780041721.01.T01:intron 20.0%
!!! ACATTTTACAATAGTTAGTA+AGG + Chr7:94433320-94433339 None:intergenic 20.0%
!!! TCTTTGTATACATTTTACAT+TGG - Chr7:94434472-94434491 MsG0780041721.01.T01:intron 20.0%
! AAATTTGTGAAACTACTTGT+GGG + Chr7:94434558-94434577 None:intergenic 25.0%
! AAGAAACAATGTTCTTCAAA+TGG + Chr7:94435344-94435363 None:intergenic 25.0%
! AGTGATATCATTAGAGTTAA+GGG + Chr7:94433297-94433316 None:intergenic 25.0%
! ATAACCTATGCTATTCTTAA+TGG - Chr7:94435256-94435275 MsG0780041721.01.T01:CDS 25.0%
! ATAGGATCTGATTATAAACA+TGG - Chr7:94434115-94434134 MsG0780041721.01.T01:CDS 25.0%
! GTTAATATATTAAGGAAGGA+AGG + Chr7:94434389-94434408 None:intergenic 25.0%
! TATTAACTCTATCAACTGTT+AGG - Chr7:94433903-94433922 MsG0780041721.01.T01:intron 25.0%
! TGGAAATATTTGTTTGGTTA+TGG - Chr7:94433772-94433791 MsG0780041721.01.T01:CDS 25.0%
! TTTGTTAATGATCAAACACA+TGG + Chr7:94432883-94432902 None:intergenic 25.0%
!! AAAGATTTTCCAAGTATATC+TGG + Chr7:94434457-94434476 None:intergenic 25.0%
!! AGGAAAATTTTACACAATGT+AGG + Chr7:94433694-94433713 None:intergenic 25.0%
!! ATAGTATTTTCTCATTCACT+CGG - Chr7:94433391-94433410 MsG0780041721.01.T01:CDS 25.0%
!! ATGATTTGCAAACAGATATT+AGG + Chr7:94433666-94433685 None:intergenic 25.0%
!! TGATTTGCAAACAGATATTA+GGG + Chr7:94433665-94433684 None:intergenic 25.0%
AAGGAAGGAAGGAAAATAAA+AGG + Chr7:94434378-94434397 None:intergenic 30.0%
AGATCCATTAAGAATAGCAT+AGG + Chr7:94435263-94435282 None:intergenic 30.0%
AGTCCATATCTACAATCAAT+AGG - Chr7:94434097-94434116 MsG0780041721.01.T01:CDS 30.0%
AGTTTACTGTGGAAATACAA+AGG - Chr7:94435135-94435154 MsG0780041721.01.T01:CDS 30.0%
ATTTGCAAACAGATATTAGG+GGG + Chr7:94433663-94433682 None:intergenic 30.0%
GAAATTTGTGAAACTACTTG+TGG + Chr7:94434559-94434578 None:intergenic 30.0%
GAAGTTCTACTAAGAATGAA+GGG + Chr7:94434776-94434795 None:intergenic 30.0%
GAGTGATATCATTAGAGTTA+AGG + Chr7:94433298-94433317 None:intergenic 30.0%
GATGCAAATAATCACAGATT+AGG + Chr7:94433714-94433733 None:intergenic 30.0%
GATTTGCAAACAGATATTAG+GGG + Chr7:94433664-94433683 None:intergenic 30.0%
GGAAATACAAAGGAGATAAA+TGG - Chr7:94435145-94435164 MsG0780041721.01.T01:CDS 30.0%
GTATTTCCACAGTAAACTTT+AGG + Chr7:94435133-94435152 None:intergenic 30.0%
TATGAAACAGGTCTTCAATA+TGG - Chr7:94435061-94435080 MsG0780041721.01.T01:intron 30.0%
TCTAGCTGGAAATATTTGTT+TGG - Chr7:94433766-94433785 MsG0780041721.01.T01:CDS 30.0%
TGGTTGCAAATTGTTTCATT+TGG + Chr7:94434237-94434256 None:intergenic 30.0%
TGTAGATATGGACTCAAAAA+TGG + Chr7:94434091-94434110 None:intergenic 30.0%
TTGAAGTAAGTCATTCCATA+AGG + Chr7:94433182-94433201 None:intergenic 30.0%
TTGTAGGAGCTATATAATCT+TGG - Chr7:94434705-94434724 MsG0780041721.01.T01:intron 30.0%
! AATACTTCTTTGTTTGTCAC+TGG - Chr7:94434178-94434197 MsG0780041721.01.T01:CDS 30.0%
! ACTTAGCACTACATTTTAAG+TGG + Chr7:94433639-94433658 None:intergenic 30.0%
! ATACTTCTTTGTTTGTCACT+GGG - Chr7:94434179-94434198 MsG0780041721.01.T01:CDS 30.0%
! GATCCTATTGATTGTAGATA+TGG + Chr7:94434103-94434122 None:intergenic 30.0%
! GATGTGTTTGAACTCATTTT+TGG + Chr7:94433005-94433024 None:intergenic 30.0%
! TAGTAAGTTGAAATTAACGG+TGG + Chr7:94433855-94433874 None:intergenic 30.0%
! TAGTATTTTCTCATTCACTC+GGG - Chr7:94433392-94433411 MsG0780041721.01.T01:CDS 30.0%
! TTTTGCTCACTGAAATTTGT+AGG - Chr7:94434689-94434708 MsG0780041721.01.T01:intron 30.0%
!! GTGACAAACAAAGAAGTATT+AGG + Chr7:94434178-94434197 None:intergenic 30.0%
!! TTCAAGGCTATTTTCAACTT+TGG - Chr7:94433101-94433120 MsG0780041721.01.T01:CDS 30.0%
!!! AACCATTTTAAAACTGTTGG+TGG + Chr7:94434319-94434338 None:intergenic 30.0%
!!! CCAACAGTTTTAAAATGGTT+CGG - Chr7:94434319-94434338 MsG0780041721.01.T01:intron 30.0%
AACTCTATCAACTGTTAGGA+TGG - Chr7:94433907-94433926 MsG0780041721.01.T01:intron 35.0%
ACTCTATCAACTGTTAGGAT+GGG - Chr7:94433908-94433927 MsG0780041721.01.T01:intron 35.0%
ACTTACTTCAATAAACCAGC+TGG - Chr7:94433191-94433210 MsG0780041721.01.T01:CDS 35.0%
AGATCACAATGTTCCTGAAA+TGG + Chr7:94435304-94435323 None:intergenic 35.0%
AGCAGGTGAATTGAATTGAT+TGG - Chr7:94433552-94433571 MsG0780041721.01.T01:CDS 35.0%
AGGAGCTATATAATCTTGGT+GGG - Chr7:94434709-94434728 MsG0780041721.01.T01:intron 35.0%
CAATGTTCCTGAAATGGAAA+AGG + Chr7:94435298-94435317 None:intergenic 35.0%
CATTGTGATCTTCAACCTAT+AGG - Chr7:94435313-94435332 MsG0780041721.01.T01:CDS 35.0%
CTAAAGGTTATAAGAGTCGA+AGG + Chr7:94433431-94433450 None:intergenic 35.0%
CTAGATGTCTTTGTCTTGTA+AGG + Chr7:94433751-94433770 None:intergenic 35.0%
CTTCAAATGGATCAACCTAT+AGG + Chr7:94435331-94435350 None:intergenic 35.0%
CTTCGACTCTTATAACCTTT+AGG - Chr7:94433429-94433448 MsG0780041721.01.T01:CDS 35.0%
GATTCAAATTCAGATACTGG+TGG - Chr7:94433125-94433144 MsG0780041721.01.T01:CDS 35.0%
GGAAGTTCTACTAAGAATGA+AGG + Chr7:94434777-94434796 None:intergenic 35.0%
GGAGATTCAAATTCAGATAC+TGG - Chr7:94433122-94433141 MsG0780041721.01.T01:CDS 35.0%
GGTTCAAACACATATCTCTT+TGG - Chr7:94434981-94435000 MsG0780041721.01.T01:intron 35.0%
TACTTAATCTTGCACCAGTA+GGG - Chr7:94434745-94434764 MsG0780041721.01.T01:intron 35.0%
TAGGAGCTATATAATCTTGG+TGG - Chr7:94434708-94434727 MsG0780041721.01.T01:intron 35.0%
TCAAGGTCTGAACTATTATG+AGG + Chr7:94434798-94434817 None:intergenic 35.0%
TTCGATCCTAAAGTTTACTG+TGG - Chr7:94435124-94435143 MsG0780041721.01.T01:CDS 35.0%
TTCTTACAACAATGCAGTAG+TGG - Chr7:94434836-94434855 MsG0780041721.01.T01:intron 35.0%
TTTCCAAGTATATCTGGTGA+TGG + Chr7:94434451-94434470 None:intergenic 35.0%
! ACAAAAGCATGTTGTGGATA+TGG - Chr7:94435085-94435104 MsG0780041721.01.T01:CDS 35.0%
! ATATGGTTAGTTAACTCAGC+TGG + Chr7:94433460-94433479 None:intergenic 35.0%
! ATGGTTCGGAAAATTACGTA+TGG - Chr7:94434333-94434352 MsG0780041721.01.T01:intron 35.0%
! CTGATCAGCTTCTTTAACTT+TGG + Chr7:94434257-94434276 None:intergenic 35.0%
! GGTTGGAAGTGAAATCATTT+TGG + Chr7:94434498-94434517 None:intergenic 35.0%
! TATGGTACAAAAGCATGTTG+TGG - Chr7:94435079-94435098 MsG0780041721.01.T01:intron 35.0%
!! TATATCTGGTGATGGAAGTT+TGG + Chr7:94434443-94434462 None:intergenic 35.0%
!!! CCGAACCATTTTAAAACTGT+TGG + Chr7:94434322-94434341 None:intergenic 35.0%
!!! TGCCACCAACAGTTTTAAAA+TGG - Chr7:94434314-94434333 MsG0780041721.01.T01:intron 35.0%
AAAGCATGTTGTGGATATGG+TGG - Chr7:94435088-94435107 MsG0780041721.01.T01:CDS 40.0%
ACAAGACAAAGACATCTAGC+TGG - Chr7:94433752-94433771 MsG0780041721.01.T01:CDS 40.0%
ACCCTTACAACTATGTGAGT+TGG - Chr7:94435197-94435216 MsG0780041721.01.T01:CDS 40.0%
AGTTCAGACCTTGACGAATT+TGG - Chr7:94434804-94434823 MsG0780041721.01.T01:intron 40.0%
ATTCTGTCAGCTCAAGCTAT+TGG - Chr7:94434061-94434080 MsG0780041721.01.T01:CDS 40.0%
ATTGTGTGTGTTCAGTTCTG+TGG - Chr7:94434640-94434659 MsG0780041721.01.T01:intron 40.0%
CCCAACTCACATAGTTGTAA+GGG + Chr7:94435201-94435220 None:intergenic 40.0%
CCCTTACAACTATGTGAGTT+GGG - Chr7:94435198-94435217 MsG0780041721.01.T01:CDS 40.0%
CTTCCATCACCAGATATACT+TGG - Chr7:94434445-94434464 MsG0780041721.01.T01:intron 40.0%
GAACTGAACACACACAATGT+TGG + Chr7:94434638-94434657 None:intergenic 40.0%
GTACTTAATCTTGCACCAGT+AGG - Chr7:94434744-94434763 MsG0780041721.01.T01:intron 40.0%
GTGTTTGAACCATGAGAAGT+AGG + Chr7:94434972-94434991 None:intergenic 40.0%
GTTAAAGAAGCTGATCAGCA+AGG - Chr7:94434259-94434278 MsG0780041721.01.T01:intron 40.0%
TCCCAACTCACATAGTTGTA+AGG + Chr7:94435202-94435221 None:intergenic 40.0%
TCTTGGTGGGAGAACATTTA+TGG - Chr7:94434722-94434741 MsG0780041721.01.T01:intron 40.0%
TGACTCAAACCAACCAAACA+AGG + Chr7:94433065-94433084 None:intergenic 40.0%
TGTTCCTGAAATGGAAAAGG+AGG + Chr7:94435295-94435314 None:intergenic 40.0%
TTATAAGAGTCGAAGGATCG+TGG + Chr7:94433424-94433443 None:intergenic 40.0%
TTGGTTGAGCTGAATAGCAA+GGG + Chr7:94434218-94434237 None:intergenic 40.0%
TTTGGTTGAGCTGAATAGCA+AGG + Chr7:94434219-94434238 None:intergenic 40.0%
! AAGGACGTGAAACTAGTTTG+AGG - Chr7:94435396-94435415 MsG0780041721.01.T01:five_prime_UTR 40.0%
! ACAACTATGTGAGTTGGGAT+GGG - Chr7:94435203-94435222 MsG0780041721.01.T01:CDS 40.0%
! AGACTCGTGGTTGATTTCAT+CGG - Chr7:94433230-94433249 MsG0780041721.01.T01:CDS 40.0%
! AGTATTAGGAAGAAGCACAG+TGG + Chr7:94434164-94434183 None:intergenic 40.0%
! TACAACTATGTGAGTTGGGA+TGG - Chr7:94435202-94435221 MsG0780041721.01.T01:CDS 40.0%
! TATAAGCTTGCTTGCAGCTT+CGG + Chr7:94435239-94435258 None:intergenic 40.0%
! TGATCCTCCTTTTCCATTTC+AGG - Chr7:94435288-94435307 MsG0780041721.01.T01:CDS 40.0%
!! TGTTTGGTTGGTTTGAGTCA+AGG - Chr7:94433065-94433084 MsG0780041721.01.T01:CDS 40.0%
AACCATGAGAAGTAGGATGC+CGG + Chr7:94434965-94434984 None:intergenic 45.0%
AAGCTCCAACAGAACAGTGT+AGG + Chr7:94434940-94434959 None:intergenic 45.0%
ACTTCCAACCTAGCAGTCAT+TGG - Chr7:94434508-94434527 MsG0780041721.01.T01:intron 45.0%
AGCATCTGAGAGACTTTCTC+TGG + Chr7:94434898-94434917 None:intergenic 45.0%
AGCTGAATAGCAAGGGAGAA+AGG + Chr7:94434211-94434230 None:intergenic 45.0%
AGGACGTGGATGTGATTTCA+AGG - Chr7:94433085-94433104 MsG0780041721.01.T01:CDS 45.0%
CCATGCATCCAAATTCGTCA+AGG + Chr7:94434815-94434834 None:intergenic 45.0%
CCTTGACGAATTTGGATGCA+TGG - Chr7:94434812-94434831 MsG0780041721.01.T01:intron 45.0%
CGATACCTACACTGTTCTGT+TGG - Chr7:94434932-94434951 MsG0780041721.01.T01:intron 45.0%
GCTGAATAGCAAGGGAGAAA+GGG + Chr7:94434210-94434229 None:intergenic 45.0%
GGATGCCAATGTAGCATAGT+TGG + Chr7:94434143-94434162 None:intergenic 45.0%
GGGTGCTAAAATAAGCAAGC+AGG - Chr7:94433535-94433554 MsG0780041721.01.T01:CDS 45.0%
TGGAGCCAACTATGCTACAT+TGG - Chr7:94434135-94434154 MsG0780041721.01.T01:CDS 45.0%
! CATGCTTGTGTTGCCTTGTT+TGG - Chr7:94433049-94433068 MsG0780041721.01.T01:CDS 45.0%
! CTGTTCTGTTGGAGCTTTTC+CGG - Chr7:94434943-94434962 MsG0780041721.01.T01:intron 45.0%
!! CTTGTGTTGCCTTGTTTGGT+TGG - Chr7:94433053-94433072 MsG0780041721.01.T01:CDS 45.0%
AACCTAGCAGTCATTGGCAC+AGG - Chr7:94434514-94434533 MsG0780041721.01.T01:intron 50.0%
AATGAAGGGTAGCACCCTAC+TGG + Chr7:94434762-94434781 None:intergenic 50.0%
CCATAAGGACCAGATTCAGC+AGG + Chr7:94433167-94433186 None:intergenic 50.0%
CCTGCTGAATCTGGTCCTTA+TGG - Chr7:94433164-94433183 MsG0780041721.01.T01:CDS 50.0%
GCATGTTGTGGATATGGTGG+AGG - Chr7:94435091-94435110 MsG0780041721.01.T01:CDS 50.0%
TGTGCCAATGACTGCTAGGT+TGG + Chr7:94434515-94434534 None:intergenic 50.0%
TTCCGGCATCCTACTTCTCA+TGG - Chr7:94434960-94434979 MsG0780041721.01.T01:intron 50.0%
! GCAGCTTTTCCTGCTGAATC+TGG - Chr7:94433155-94433174 MsG0780041721.01.T01:CDS 50.0%
!! ACTCAGCTGGCTTGACCTAA+AGG + Chr7:94433447-94433466 None:intergenic 50.0%
!! GTTGGTTTGAGTCAAGGACG+TGG - Chr7:94433071-94433090 MsG0780041721.01.T01:CDS 50.0%
CACCTGTGCCAATGACTGCT+AGG + Chr7:94434519-94434538 None:intergenic 55.0%
CGAGTCTCCCATCAGAAGCA+CGG + Chr7:94433217-94433236 None:intergenic 55.0%
CTAGCAGTCATTGGCACAGG+TGG - Chr7:94434517-94434536 MsG0780041721.01.T01:intron 55.0%
TGCTTCTGATGGGAGACTCG+TGG - Chr7:94433217-94433236 MsG0780041721.01.T01:CDS 55.0%
! AAGCTTGCTTGCAGCTTCGG+TGG + Chr7:94435236-94435255 None:intergenic 55.0%
CAGCTGGCCGTGCTTCTGAT+GGG - Chr7:94433207-94433226 MsG0780041721.01.T01:CDS 60.0%
CCAGCTGGCCGTGCTTCTGA+TGG - Chr7:94433206-94433225 MsG0780041721.01.T01:CDS 65.0%
! CCATCAGAAGCACGGCCAGC+TGG + Chr7:94433209-94433228 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 94432879 94435453 94432879 ID=MsG0780041721.01;Name=MsG0780041721.01
Chr7 mRNA 94432879 94435453 94432879 ID=MsG0780041721.01.T01;Parent=MsG0780041721.01;Name=MsG0780041721.01.T01;_AED=0.31;_eAED=0.31;_QI=105|1|1|1|1|1|5|114|390
Chr7 exon 94432879 94433261 94432879 ID=MsG0780041721.01.T01:exon:22551;Parent=MsG0780041721.01.T01
Chr7 exon 94433351 94433621 94433351 ID=MsG0780041721.01.T01:exon:22550;Parent=MsG0780041721.01.T01
Chr7 exon 94433741 94433895 94433741 ID=MsG0780041721.01.T01:exon:22549;Parent=MsG0780041721.01.T01
Chr7 exon 94434052 94434261 94434052 ID=MsG0780041721.01.T01:exon:22548;Parent=MsG0780041721.01.T01
Chr7 exon 94435081 94435453 94435081 ID=MsG0780041721.01.T01:exon:22547;Parent=MsG0780041721.01.T01
Chr7 five_prime_UTR 94435349 94435453 94435349 ID=MsG0780041721.01.T01:five_prime_utr;Parent=MsG0780041721.01.T01
Chr7 CDS 94435081 94435348 94435081 ID=MsG0780041721.01.T01:cds;Parent=MsG0780041721.01.T01
Chr7 CDS 94434052 94434261 94434052 ID=MsG0780041721.01.T01:cds;Parent=MsG0780041721.01.T01
Chr7 CDS 94433741 94433895 94433741 ID=MsG0780041721.01.T01:cds;Parent=MsG0780041721.01.T01
Chr7 CDS 94433351 94433621 94433351 ID=MsG0780041721.01.T01:cds;Parent=MsG0780041721.01.T01
Chr7 CDS 94432993 94433261 94432993 ID=MsG0780041721.01.T01:cds;Parent=MsG0780041721.01.T01
Chr7 three_prime_UTR 94432879 94432992 94432879 ID=MsG0780041721.01.T01:three_prime_utr;Parent=MsG0780041721.01.T01
Gene Sequence

>MsG0780041721.01.T01

ATGACTTTGATTAAGTTTCCAAAAATGAGTTCAAACACATCCATGAATATATTATTGTTCATTTTCATGCTTGTGTTGCCTTGTTTGGTTGGTTTGAGTCAAGGACGTGGATGTGATTTCAAGGCTATTTTCAACTTTGGAGATTCAAATTCAGATACTGGTGGATTTTATGCAGCTTTTCCTGCTGAATCTGGTCCTTATGGAATGACTTACTTCAATAAACCAGCTGGCCGTGCTTCTGATGGGAGACTCGTGGTTGATTTCATCGCTCAAGCTATTGGAATTCCATTTTTGAGTCCATATCTACAATCAATAGGATCTGATTATAAACATGGAGCCAACTATGCTACATTGGCATCCACTGTGCTTCTTCCTAATACTTCTTTGTTTGTCACTGGGATCAGCCCTTTCTCCCTTGCTATTCAGCTCAACCAAATGAAACAATTTGCAACCAAAGTTAAAGAAGCTGATCAGCAAGAAACCAAACTTCCATCACCAGATATACTTGGAAAATCTTTGTATACATTTTACATTGGCCAAAATGATTTCACTTCCAACCTAGCAGTCATTGGCACAGGTGGTGTGCAAGAGTTTCTCCCACAAGTAGTTTCACAAATTTCTGCTACCATTAAAGAGCTATATAATCTTGGTGGGAGAACATTTATGGTACTTAATCTTGCACCAGTAGGGTGCTACCCTTCATTCTTAGTAGAACTTCCTCATAATAGTTCAGACCTTGACGAATTTGGATGCATGGTTTCTTACAACAATGCAGTAGTGGACTATAACAACATGTTGAAAGAGTCATTGAAACAAACCAGAGAAAGTCTCTCAGATGCTTCTGTCATTTATGTCGATACCTACACTGTTCTGTTGGAGCTTTTCCGGCATCCTACTTCTCATGGTCTTCAATATGGTACAAAAGCATGTTGTGGATATGGTGGAGGTGAGTACAACTTCGATCCTAAAGTTTACTGTGGAAATACAAAGGAGATAAATGGAAAAAGAGTGACAGCAACAGCATGTGATGACCCTTACAACTATGTGAGTTGGGATGGGATTCATGCCACCGAAGCTGCAAGCAAGCTTATAACCTATGCTATTCTTAATGGATCTTACTCTGATCCTCCTTTTCCATTTCAGGAACATTGTGATCTTCAACCTATAGGTTGA
Protein sequence

>MsG0780041721.01.T01

MTLIKFPKMSSNTSMNILLFIFMLVLPCLVGLSQGRGCDFKAIFNFGDSNSDTGGFYAAFPAESGPYGMTYFNKPAGRASDGRLVVDFIAQAIGIPFLSPYLQSIGSDYKHGANYATLASTVLLPNTSLFVTGISPFSLAIQLNQMKQFATKVKEADQQETKLPSPDILGKSLYTFYIGQNDFTSNLAVIGTGGVQEFLPQVVSQISATIKELYNLGGRTFMVLNLAPVGCYPSFLVELPHNSSDLDEFGCMVSYNNAVVDYNNMLKESLKQTRESLSDASVIYVDTYTVLLELFRHPTSHGLQYGTKACCGYGGGEYNFDPKVYCGNTKEINGKRVTATACDDPYNYVSWDGIHATEAASKLITYAILNGSYSDPPFPFQEHCDLQPIG*