AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880041973.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880041973.01.T01 MTR_8g007675 78.988 257 10 1 25 237 30 286 3.61e-140 394
MsG0880041973.01.T01 MTR_8g008505 60.854 281 66 2 1 237 1 281 1.27e-114 329
MsG0880041973.01.T01 MTR_8g008660 60.791 278 68 1 1 237 1 278 2.32e-113 326
MsG0880041973.01.T01 MTR_8g008500 59.155 284 69 2 1 237 1 284 9.17e-111 320
MsG0880041973.01.T01 MTR_8g007670 67.453 212 68 1 27 237 7 218 2.06e-104 301
MsG0880041973.01.T01 MTR_3g464040 59.551 267 67 1 12 237 4 270 4.03e-103 300
MsG0880041973.01.T01 MTR_8g007670 55.859 256 68 2 27 237 7 262 2.09e-95 280
MsG0880041973.01.T01 MTR_5g018300 47.656 256 88 2 27 237 8 262 1.20e-76 232
MsG0880041973.01.T01 MTR_5g018320 45.385 260 96 2 23 237 1 259 6.44e-76 230
MsG0880041973.01.T01 MTR_5g018280 46.667 255 91 2 27 237 8 261 3.38e-74 226
MsG0880041973.01.T01 MTR_8g079120 37.154 253 114 5 27 237 11 260 7.58e-49 161
MsG0880041973.01.T01 MTR_5g018365 37.945 253 112 6 27 237 12 261 5.15e-48 159
MsG0880041973.01.T01 MTR_3g093730 36.364 231 129 3 4 234 25 237 9.50e-45 150
MsG0880041973.01.T01 MTR_5g018350 34.783 253 120 5 27 237 7 256 1.69e-44 150
MsG0880041973.01.T01 MTR_5g068100 31.641 256 125 3 27 237 30 280 3.38e-38 134
MsG0880041973.01.T01 MTR_3g093730 31.159 276 127 4 4 234 25 282 3.51e-38 134
MsG0880041973.01.T01 MTR_8g079120 51.786 112 52 1 27 136 53 164 6.49e-38 132
MsG0880041973.01.T01 MTR_7g015220 34.940 249 120 4 27 234 124 371 4.03e-37 134
MsG0880041973.01.T01 MTR_3g005410 29.389 262 134 4 20 235 87 343 3.20e-32 120
MsG0880041973.01.T01 MTR_5g008130 56.962 79 34 0 159 237 2 80 3.05e-23 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880041973.01.T01 AT2G23610 48.095 210 105 3 29 237 11 217 7.41e-59 186
MsG0880041973.01.T01 AT3G50440 38.281 256 109 3 28 237 22 274 2.76e-58 186
MsG0880041973.01.T01 AT2G23620 38.911 257 108 4 27 237 9 262 1.41e-53 174
MsG0880041973.01.T01 AT2G23600 39.300 257 107 4 27 237 9 262 4.25e-52 170
MsG0880041973.01.T01 AT2G23600 39.300 257 107 4 27 237 24 277 5.80e-52 170
MsG0880041973.01.T01 AT2G23590 36.900 271 124 6 9 237 6 271 1.39e-50 166
MsG0880041973.01.T01 AT2G23610 39.844 256 103 5 29 237 11 262 1.41e-50 166
MsG0880041973.01.T01 AT4G37150 36.078 255 117 5 27 237 3 255 1.22e-47 158
MsG0880041973.01.T01 AT2G23560 38.281 256 115 7 24 237 5 259 4.18e-46 154
MsG0880041973.01.T01 AT2G23580 36.260 262 115 5 24 237 5 262 1.42e-44 150
MsG0880041973.01.T01 AT2G23550 36.538 260 117 7 24 237 5 262 3.45e-42 144
MsG0880041973.01.T01 AT2G23550 36.923 260 116 8 24 237 12 269 4.96e-42 144
MsG0880041973.01.T01 AT5G10300 35.178 253 121 5 27 237 6 257 5.62e-41 141
MsG0880041973.01.T01 AT3G29770 36.364 253 111 4 28 235 139 386 3.08e-40 142
MsG0880041973.01.T01 AT5G58310 31.395 258 123 4 27 234 5 258 6.26e-40 138
MsG0880041973.01.T01 AT4G16690 33.065 248 120 5 27 232 12 255 1.21e-39 137
MsG0880041973.01.T01 AT2G23600 50.806 124 59 2 27 149 24 146 6.18e-39 134
MsG0880041973.01.T01 AT1G33990 31.102 254 124 3 28 235 98 346 2.94e-38 136
MsG0880041973.01.T01 AT1G26360 33.992 253 117 4 28 235 190 437 1.14e-37 137
MsG0880041973.01.T01 AT4G37140 52.427 103 49 0 27 129 3 105 4.39e-37 127
MsG0880041973.01.T01 AT4G09900 30.315 254 126 3 28 235 99 347 7.19e-36 130
MsG0880041973.01.T01 AT3G10870 31.621 253 126 2 27 234 20 270 8.87e-36 128
MsG0880041973.01.T01 AT1G69240 32.157 255 121 5 28 235 188 437 2.24e-35 130
MsG0880041973.01.T01 AT5G10300 49.515 103 52 0 27 129 6 108 4.83e-32 116
MsG0880041973.01.T01 AT2G23580 49.533 107 53 1 24 129 5 111 1.12e-31 115
MsG0880041973.01.T01 AT4G37140 51.111 90 44 0 27 116 3 92 4.07e-31 110
MsG0880041973.01.T01 AT2G23550 46.721 122 63 2 24 144 12 132 5.70e-31 114
MsG0880041973.01.T01 AT3G29770 51.389 72 35 0 28 99 139 210 5.30e-19 84.0
MsG0880041973.01.T01 AT2G23570 46.875 96 48 2 142 237 86 178 4.06e-16 73.9

Find 43 sgRNAs with CRISPR-Local

Find 114 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAACCTTTGATGACATTTA+TGG 0.080586 8:-2018345 MsG0880041973.01.T01:CDS
AGTTCAACATCTTTATAAAT+TGG 0.216142 8:+2016961 None:intergenic
GCACTATTAACACAAATTAT+AGG 0.241233 8:+2018530 None:intergenic
AGGGTGGAACTAAGCTTCTT+TGG 0.269816 8:+2016757 None:intergenic
TACTCTTCCATTTCTATCAT+TGG 0.292250 8:+2016915 None:intergenic
TGAATCTCTTGTACTTGTAT+TGG 0.323609 8:+2018386 None:intergenic
ACAATTGAATTAGCTGCTTC+AGG 0.352801 8:-2018416 MsG0880041973.01.T01:CDS
TGAGAAGGTGGAAGTGATAG+AGG 0.372293 8:-2016809 MsG0880041973.01.T01:CDS
TGGTGCATGGTGTTGGTATA+AGG 0.400591 8:-2018477 MsG0880041973.01.T01:CDS
ATTACCTCTTGAAGAACAAC+AGG 0.404228 8:+2018176 None:intergenic
ATGGTTACCAATGATAGAAA+TGG 0.421786 8:-2016922 MsG0880041973.01.T01:CDS
ATCACTTCCACCTTCTCAAA+TGG 0.422893 8:+2016814 None:intergenic
AGATGTTGAACTATTGTTGA+AGG 0.427375 8:-2016950 MsG0880041973.01.T01:CDS
AAATTTATAAGATGATGAAA+AGG 0.434435 8:-2018595 None:intergenic
AAGGAAAAGGTGATTCTTGT+TGG 0.440376 8:-2018308 MsG0880041973.01.T01:CDS
CTTGTTGGTCATAGTCTTGG+TGG 0.441219 8:-2018293 MsG0880041973.01.T01:CDS
ATTCTTGTTGGTCATAGTCT+TGG 0.443284 8:-2018296 MsG0880041973.01.T01:CDS
ATCTCTTCCTCCAAAGGAAA+AGG 0.464266 8:-2018321 MsG0880041973.01.T01:CDS
TTGTTGGTCATAGTCTTGGT+GGG 0.483396 8:-2018292 MsG0880041973.01.T01:CDS
ACATCTTTATAAATTGGTAC+AGG 0.484656 8:+2016967 None:intergenic
AATTTATAAGATGATGAAAA+GGG 0.497143 8:-2018594 None:intergenic
GCAACTATGCTTAAATCAGC+TGG 0.513884 8:-2018452 MsG0880041973.01.T01:CDS
GGTGTCTACATCTGTTGCTA+TGG 0.514872 8:-2018270 MsG0880041973.01.T01:CDS
AAATTGGTACAGGTCTCACT+AGG 0.515680 8:+2016977 None:intergenic
GTCTCACTAGGGACAATGCA+AGG 0.519627 8:+2016989 None:intergenic
AAGTGGTCCATTTGAGAAGG+TGG 0.534667 8:-2016821 MsG0880041973.01.T01:CDS
TATGGAATCTCTTCCTCCAA+AGG 0.542372 8:-2018327 MsG0880041973.01.T01:CDS
CTGATTCATGGTGGAAGCCA+TGG 0.542667 8:-2018497 MsG0880041973.01.T01:CDS
ATACCCTGTTGTTCTTCAAG+AGG 0.545354 8:-2018180 MsG0880041973.01.T01:intron
GAAGCCATGGTGCATGGTGT+TGG 0.558171 8:-2018484 MsG0880041973.01.T01:CDS
ACTATTGTTGAAGGAAACAA+TGG 0.570002 8:-2016941 MsG0880041973.01.T01:CDS
TGTTGGTCATAGTCTTGGTG+GGG 0.581014 8:-2018291 MsG0880041973.01.T01:CDS
GAAGAACAACAGGGTATGAG+AGG 0.589704 8:+2018186 None:intergenic
GATTCCATAAATGTCATCAA+AGG 0.596705 8:+2018341 None:intergenic
GAGAAGTGGTCCATTTGAGA+AGG 0.599756 8:-2016824 MsG0880041973.01.T01:CDS
AAGTGATAATTTGATAACAG+AGG 0.620511 8:-2016869 MsG0880041973.01.T01:CDS
GATAGAGGATTCTGATCACA+TGG 0.632772 8:-2016794 MsG0880041973.01.T01:CDS
AATTGGTACAGGTCTCACTA+GGG 0.640202 8:+2016978 None:intergenic
ATGGTGGAAGCCATGGTGCA+TGG 0.643508 8:-2018490 MsG0880041973.01.T01:CDS
TCTCACTAGGGACAATGCAA+GGG 0.646794 8:+2016990 None:intergenic
TATACCAACACCATGCACCA+TGG 0.667607 8:+2018480 None:intergenic
ATGTTGATGATTGAGAGAAG+TGG 0.696124 8:-2016838 MsG0880041973.01.T01:CDS
TTACCTCTTGAAGAACAACA+GGG 0.771294 8:+2018177 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATATTAATAATATGCA+AGG - Chr8:2017611-2017630 MsG0880041973.01.T01:intron 10.0%
!!! TAAATATAGTTTATTGTTTT+GGG - Chr8:2017327-2017346 MsG0880041973.01.T01:intron 10.0%
!!! TATGAATAATTTAATTTTGT+GGG + Chr8:2017206-2017225 None:intergenic 10.0%
!!! TGTTATTTTTAATTTAATTG+AGG + Chr8:2017252-2017271 None:intergenic 10.0%
!!! TTAAATATAGTTTATTGTTT+TGG - Chr8:2017326-2017345 MsG0880041973.01.T01:intron 10.0%
!!! TTATGAATAATTTAATTTTG+TGG + Chr8:2017207-2017226 None:intergenic 10.0%
!! AAAAGTAAAAATATTGAGAA+TGG + Chr8:2017743-2017762 None:intergenic 15.0%
!! AAAGTAAAAATATTGAGAAT+GGG + Chr8:2017742-2017761 None:intergenic 15.0%
!!! AAACATATTTAATCCTTTTT+TGG - Chr8:2017454-2017473 MsG0880041973.01.T01:intron 15.0%
!!! AACATATTTAATCCTTTTTT+GGG - Chr8:2017455-2017474 MsG0880041973.01.T01:intron 15.0%
!!! ATAAAAATTTAACTTTGACT+TGG - Chr8:2018220-2018239 MsG0880041973.01.T01:CDS 15.0%
!!! ATACTCTTTATTTTTTTTTG+TGG + Chr8:2017659-2017678 None:intergenic 15.0%
!!! TATATACCTTTTGAATTTTA+TGG - Chr8:2017357-2017376 MsG0880041973.01.T01:intron 15.0%
!!! TCTCAATATTTTTACTTTTT+AGG - Chr8:2017744-2017763 MsG0880041973.01.T01:intron 15.0%
!!! TTGCTTATGATAAAAATTTT+AGG + Chr8:2018427-2018446 None:intergenic 15.0%
!! AATAACACAAATAATTGCTA+TGG + Chr8:2017785-2017804 None:intergenic 20.0%
!! AGTTCAACATCTTTATAAAT+TGG + Chr8:2018358-2018377 None:intergenic 20.0%
!! TACATATATATTACTTTGCT+GGG - Chr8:2017303-2017322 MsG0880041973.01.T01:intron 20.0%
!!! AAAAAAATAAAGAGTATTCC+AGG - Chr8:2017662-2017681 MsG0880041973.01.T01:intron 20.0%
!!! ACTTTTTTGCAATCTTTAAA+AGG + Chr8:2018582-2018601 None:intergenic 20.0%
!!! CTTTTTTGCAATCTTTAAAA+GGG + Chr8:2018581-2018600 None:intergenic 20.0%
!!! GAATTTTAAAAATTGAGTGA+GGG - Chr8:2017426-2017445 MsG0880041973.01.T01:intron 20.0%
!!! TGAATTTTAAAAATTGAGTG+AGG - Chr8:2017425-2017444 MsG0880041973.01.T01:intron 20.0%
! AAATCCTACACATTTCAATT+TGG + Chr8:2018304-2018323 None:intergenic 25.0%
! AACTTTGATTAAAGACAAAG+AGG - Chr8:2017716-2017735 MsG0880041973.01.T01:intron 25.0%
! ACATCTTTATAAATTGGTAC+AGG + Chr8:2018352-2018371 None:intergenic 25.0%
! CCATTCTTAAAATATGTCAT+TGG + Chr8:2017387-2017406 None:intergenic 25.0%
! CTACATATATATTACTTTGC+TGG - Chr8:2017302-2017321 MsG0880041973.01.T01:intron 25.0%
! GCACTATTAACACAAATTAT+AGG + Chr8:2016789-2016808 None:intergenic 25.0%
! TTATAAACAACTCCCAAAAA+AGG + Chr8:2017470-2017489 None:intergenic 25.0%
!! AAGTGATAATTTGATAACAG+AGG - Chr8:2018447-2018466 MsG0880041973.01.T01:CDS 25.0%
!! ACAAAGTTTTTCTTCTTTGA+TGG - Chr8:2018095-2018114 MsG0880041973.01.T01:intron 25.0%
!! TGTCTTTAATCAAAGTTTTG+TGG + Chr8:2017713-2017732 None:intergenic 25.0%
!!! AGCATTGTTTTGAATTTATG+AGG - Chr8:2017923-2017942 MsG0880041973.01.T01:intron 25.0%
!!! CCAATGACATATTTTAAGAA+TGG - Chr8:2017384-2017403 MsG0880041973.01.T01:intron 25.0%
!!! CTCTTTATTTTTTTTTGTGG+TGG + Chr8:2017656-2017675 None:intergenic 25.0%
!!! TAGAAGGATTAGTTCTTTAA+TGG - Chr8:2018070-2018089 MsG0880041973.01.T01:intron 25.0%
!!! TTTGTGTTATTTCCATACTT+TGG - Chr8:2017794-2017813 MsG0880041973.01.T01:intron 25.0%
AACTCCAAATTGAAATGTGT+AGG - Chr8:2018297-2018316 MsG0880041973.01.T01:CDS 30.0%
ACTATTGTTGAAGGAAACAA+TGG - Chr8:2018375-2018394 MsG0880041973.01.T01:CDS 30.0%
AGATGTTGAACTATTGTTGA+AGG - Chr8:2018366-2018385 MsG0880041973.01.T01:CDS 30.0%
ATGGTTACCAATGATAGAAA+TGG - Chr8:2018394-2018413 MsG0880041973.01.T01:CDS 30.0%
GATTCCATAAATGTCATCAA+AGG + Chr8:2016978-2016997 None:intergenic 30.0%
GCAATTAATCATCCAAAGTA+TGG + Chr8:2017809-2017828 None:intergenic 30.0%
GGTAGTCCATAAAATTCAAA+AGG + Chr8:2017366-2017385 None:intergenic 30.0%
TACTCTTCCATTTCTATCAT+TGG + Chr8:2018404-2018423 None:intergenic 30.0%
TATGAGGTCATGTAACTTTA+TGG - Chr8:2017939-2017958 MsG0880041973.01.T01:intron 30.0%
TGAATCTCTTGTACTTGTAT+TGG + Chr8:2016933-2016952 None:intergenic 30.0%
TGGTGATAATTGATACATCT+TGG + Chr8:2018171-2018190 None:intergenic 30.0%
! TGAACCTTTGATGACATTTA+TGG - Chr8:2016971-2016990 MsG0880041973.01.T01:CDS 30.0%
!! TTTTGCAATCTTTAAAAGGG+TGG + Chr8:2018578-2018597 None:intergenic 30.0%
AAGGAAAAGGTGATTCTTGT+TGG - Chr8:2017008-2017027 MsG0880041973.01.T01:intron 35.0%
ACAATTGAATTAGCTGCTTC+AGG - Chr8:2016900-2016919 MsG0880041973.01.T01:CDS 35.0%
AGAATGAATTGTGGAATTCC+TGG + Chr8:2017683-2017702 None:intergenic 35.0%
ATTACCTCTTGAAGAACAAC+AGG + Chr8:2017143-2017162 None:intergenic 35.0%
ATTCTTGTTGGTCATAGTCT+TGG - Chr8:2017020-2017039 MsG0880041973.01.T01:intron 35.0%
ATTGGTTGGACCAAAATTCA+TGG - Chr8:2018142-2018161 MsG0880041973.01.T01:intron 35.0%
GGAATTCCACAATTCATTCT+AGG - Chr8:2017683-2017702 MsG0880041973.01.T01:intron 35.0%
GGAATTCCTAGAATGAATTG+TGG + Chr8:2017692-2017711 None:intergenic 35.0%
GGTGGAGTATATGTTAATGA+TGG - Chr8:2018196-2018215 MsG0880041973.01.T01:CDS 35.0%
GTATCAATTATCACCATCTG+AGG - Chr8:2018175-2018194 MsG0880041973.01.T01:intron 35.0%
TAATTGCATAGTGCACACTT+TGG - Chr8:2017822-2017841 MsG0880041973.01.T01:intron 35.0%
TTAATAATATGCAAGGTCCG+AGG - Chr8:2017618-2017637 MsG0880041973.01.T01:intron 35.0%
TTACCTCTTGAAGAACAACA+GGG + Chr8:2017142-2017161 None:intergenic 35.0%
! ACAAGAATCACCTTTTCCTT+TGG + Chr8:2017008-2017027 None:intergenic 35.0%
! ATCTTGGATGCCATGAATTT+TGG + Chr8:2018155-2018174 None:intergenic 35.0%
!! ATGTTGATGATTGAGAGAAG+TGG - Chr8:2018478-2018497 MsG0880041973.01.T01:CDS 35.0%
!!! AATTTTGTGCTGATTCATGG+TGG - Chr8:2016810-2016829 MsG0880041973.01.T01:CDS 35.0%
!!! ACTGCAACTGAGATTTTTTG+TGG + Chr8:2017080-2017099 None:intergenic 35.0%
!!! GCAAATTTTGTGCTGATTCA+TGG - Chr8:2016807-2016826 MsG0880041973.01.T01:CDS 35.0%
AAATTGGTACAGGTCTCACT+AGG + Chr8:2018342-2018361 None:intergenic 40.0%
AACATATACTCCACCTCAGA+TGG + Chr8:2018191-2018210 None:intergenic 40.0%
AATTGGTACAGGTCTCACTA+GGG + Chr8:2018341-2018360 None:intergenic 40.0%
ATACCCTGTTGTTCTTCAAG+AGG - Chr8:2017136-2017155 MsG0880041973.01.T01:intron 40.0%
ATCACTTCCACCTTCTCAAA+TGG + Chr8:2018505-2018524 None:intergenic 40.0%
ATCTCTTCCTCCAAAGGAAA+AGG - Chr8:2016995-2017014 MsG0880041973.01.T01:CDS 40.0%
GATAGAGGATTCTGATCACA+TGG - Chr8:2018522-2018541 MsG0880041973.01.T01:CDS 40.0%
GCAACTATGCTTAAATCAGC+TGG - Chr8:2016864-2016883 MsG0880041973.01.T01:CDS 40.0%
TATGGAATCTCTTCCTCCAA+AGG - Chr8:2016989-2017008 MsG0880041973.01.T01:CDS 40.0%
TCAATTATCACCATCTGAGG+TGG - Chr8:2018178-2018197 MsG0880041973.01.T01:intron 40.0%
! AGAATCACCTTTTCCTTTGG+AGG + Chr8:2017005-2017024 None:intergenic 40.0%
! TTGTTGGTCATAGTCTTGGT+GGG - Chr8:2017024-2017043 MsG0880041973.01.T01:intron 40.0%
!!! ATTTTTTTTTGTGGTGGCCG+AGG + Chr8:2017650-2017669 None:intergenic 40.0%
AAGTGGTCCATTTGAGAAGG+TGG - Chr8:2018495-2018514 MsG0880041973.01.T01:CDS 45.0%
AGGGTGGAACTAAGCTTCTT+TGG + Chr8:2018562-2018581 None:intergenic 45.0%
CAAACCTCCAACTGCTAGAT+TGG - Chr8:2018124-2018143 MsG0880041973.01.T01:intron 45.0%
CCATCTTGTAGCAAGCTAGA+AGG - Chr8:2018054-2018073 MsG0880041973.01.T01:intron 45.0%
GAAGAACAACAGGGTATGAG+AGG + Chr8:2017133-2017152 None:intergenic 45.0%
GAGAAGTGGTCCATTTGAGA+AGG - Chr8:2018492-2018511 MsG0880041973.01.T01:CDS 45.0%
GGTGTCTACATCTGTTGCTA+TGG - Chr8:2017046-2017065 MsG0880041973.01.T01:intron 45.0%
TAGCAACAGTCCACGAAACA+AGG + Chr8:2017991-2018010 None:intergenic 45.0%
TATACCAACACCATGCACCA+TGG + Chr8:2016839-2016858 None:intergenic 45.0%
TCTAGCAGTTGGAGGTTTGT+TGG + Chr8:2018123-2018142 None:intergenic 45.0%
TCTCACTAGGGACAATGCAA+GGG + Chr8:2018329-2018348 None:intergenic 45.0%
TGAGAAGGTGGAAGTGATAG+AGG - Chr8:2018507-2018526 MsG0880041973.01.T01:CDS 45.0%
! CTAGCAGTTGGAGGTTTGTT+GGG + Chr8:2018122-2018141 None:intergenic 45.0%
! CTTGTTGGTCATAGTCTTGG+TGG - Chr8:2017023-2017042 MsG0880041973.01.T01:intron 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG - Chr8:2017519-2017538 MsG0880041973.01.T01:intron 45.0%
! TGTTGGTCATAGTCTTGGTG+GGG - Chr8:2017025-2017044 MsG0880041973.01.T01:intron 45.0%
!! AAGAAGTGAGCCTTGTTTCG+TGG - Chr8:2017978-2017997 MsG0880041973.01.T01:intron 45.0%
!! CCTTCTAGCTTGCTACAAGA+TGG + Chr8:2018057-2018076 None:intergenic 45.0%
!! TGGTGCATGGTGTTGGTATA+AGG - Chr8:2016839-2016858 MsG0880041973.01.T01:CDS 45.0%
AAGGTCCGAGGTTCAAACCT+CGG - Chr8:2017630-2017649 MsG0880041973.01.T01:intron 50.0%
CAACTGAGCTAAGCTCACGA+GGG + Chr8:2017516-2017535 None:intergenic 50.0%
CCAACCAATCTAGCAGTTGG+AGG + Chr8:2018131-2018150 None:intergenic 50.0%
CCTCCAACTGCTAGATTGGT+TGG - Chr8:2018128-2018147 MsG0880041973.01.T01:intron 50.0%
GGTCCAACCAATCTAGCAGT+TGG + Chr8:2018134-2018153 None:intergenic 50.0%
GTCTCACTAGGGACAATGCA+AGG + Chr8:2018330-2018349 None:intergenic 50.0%
! CTGATTCATGGTGGAAGCCA+TGG - Chr8:2016819-2016838 MsG0880041973.01.T01:CDS 50.0%
CCAACTGAGCTAAGCTCACG+AGG + Chr8:2017517-2017536 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - Chr8:2017514-2017533 MsG0880041973.01.T01:intron 55.0%
GAAGCCATGGTGCATGGTGT+TGG - Chr8:2016832-2016851 MsG0880041973.01.T01:CDS 55.0%
! ATGGTGGAAGCCATGGTGCA+TGG - Chr8:2016826-2016845 MsG0880041973.01.T01:CDS 55.0%
GGTGGCCGAGGTTTGAACCT+CGG + Chr8:2017638-2017657 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 2016732 2018606 2016732 ID=MsG0880041973.01;Name=MsG0880041973.01
Chr8 mRNA 2016732 2018606 2016732 ID=MsG0880041973.01.T01;Parent=MsG0880041973.01;Name=MsG0880041973.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|1|1|2|0|237
Chr8 exon 2018181 2018606 2018181 ID=MsG0880041973.01.T01:exon:1247;Parent=MsG0880041973.01.T01
Chr8 exon 2016732 2017019 2016732 ID=MsG0880041973.01.T01:exon:1246;Parent=MsG0880041973.01.T01
Chr8 CDS 2018181 2018606 2018181 ID=MsG0880041973.01.T01:cds;Parent=MsG0880041973.01.T01
Chr8 CDS 2016732 2017019 2016732 ID=MsG0880041973.01.T01:cds;Parent=MsG0880041973.01.T01
Gene Sequence

>MsG0880041973.01.T01

ATGATGAAAAGGGAGATTCACTTTGTGCACATTCTTTTGTTATTAATTCTTTGTCCTATAATTTGTGTTAATAGTGCAAATTTTGTGCTGATTCATGGTGGAAGCCATGGTGCATGGTGTTGGTATAAGGTTGCAACTATGCTTAAATCAGCTGGTCATAATGTTACAACAATTGAATTAGCTGCTTCAGGTATCAATCCAATACAAGTACAAGAGATTCATTCAATTTCAAAATATTATGAACCTTTGATGACATTTATGGAATCTCTTCCTCCAAAGGAAAAGGTGATTCTTGTTGGTCATAGTCTTGGTGGGGTGTCTACATCTGTTGCTATGGAAAAGTTTCCACAAAAAATCTCAGTTGCAGTTTTTGTTACTGCTTATGTGCTTAGTCAAAACCTCTCATACCCTGTTGTTCTTCAAGAGGATTTGACCCTTGCATTGTCCCTAGTGAGACCTGTACCAATTTATAAAGATGTTGAACTATTGTTGAAGGAAACAATGGTTACCAATGATAGAAATGGAAGAGTACCTAAAATTTTTATCATAAGCAAAAGTGATAATTTGATAACAGAGGATTTACAAATGTTGATGATTGAGAGAAGTGGTCCATTTGAGAAGGTGGAAGTGATAGAGGATTCTGATCACATGGTCATGTTCTCTAAACCAAAGAAGCTTAGTTCCACCCTTTTAAAGATTGCAAAAAAGTATTAA
Protein sequence

>MsG0880041973.01.T01

MMKREIHFVHILLLLILCPIICVNSANFVLIHGGSHGAWCWYKVATMLKSAGHNVTTIELAASGINPIQVQEIHSISKYYEPLMTFMESLPPKEKVILVGHSLGGVSTSVAMEKFPQKISVAVFVTAYVLSQNLSYPVVLQEDLTLALSLVRPVPIYKDVELLLKETMVTNDRNGRVPKIFIISKSDNLITEDLQMLMIERSGPFEKVEVIEDSDHMVMFSKPKKLSSTLLKIAKKY*