AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042516.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042516.01.T01 MTR_8g015550 86.179 123 16 1 12 133 81 203 1.19e-72 233
MsG0880042516.01.T01 MTR_8g015550 91.489 94 3 1 144 237 500 588 5.35e-38 140
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042516.01.T01 AT1G73020 56.911 123 52 1 12 133 81 203 5.81e-45 159
MsG0880042516.01.T01 AT1G73020 76.596 94 17 1 144 237 500 588 8.32e-32 122
MsG0880042516.01.T01 AT1G73020 56.911 123 52 1 12 133 81 203 5.81e-45 159
MsG0880042516.01.T01 AT1G73020 76.596 94 17 1 144 237 500 588 8.32e-32 122
MsG0880042516.01.T01 AT1G73020 56.911 123 52 1 12 133 81 203 5.81e-45 159
MsG0880042516.01.T01 AT1G73020 76.596 94 17 1 144 237 500 588 8.32e-32 122

Find 77 sgRNAs with CRISPR-Local

Find 325 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACGAGATTTATTCGTATTA+TGG 0.138766 8:+9898382 MsG0880042516.01.T01:CDS
TGCTACTGTCATTTGATATA+TGG 0.213264 8:+9897769 MsG0880042516.01.T01:CDS
TGAGCTTTCTTTCTTCTTGC+TGG 0.214854 8:-9902165 None:intergenic
AGCCTGGCTTAACATATTTC+AGG 0.220405 8:+9900650 MsG0880042516.01.T01:CDS
AGGGAGAAATTTATATGTTT+TGG 0.267997 8:+9902389 MsG0880042516.01.T01:three_prime_UTR
GGGGAGAATGATTCAGAAAT+TGG 0.281124 8:+9898160 MsG0880042516.01.T01:CDS
GTGATAACCCTTAAATTTGA+TGG 0.281352 8:+9898116 MsG0880042516.01.T01:CDS
TCAGGACTTGGGCTCTTCAT+TGG 0.287955 8:+9898335 MsG0880042516.01.T01:CDS
TCAAAATTACTAGCAGCTTC+AGG 0.302221 8:-9900593 None:intergenic
ACGAGATTTATTCGTATTAT+GGG 0.303434 8:+9898383 MsG0880042516.01.T01:CDS
ATTCAGTATATTACTAAGAT+TGG 0.333183 8:+9899428 MsG0880042516.01.T01:CDS
GGACAATCTCCGGAGGAAAA+AGG 0.338704 8:+9902064 MsG0880042516.01.T01:three_prime_UTR
TTAAGTTCGGTTCGCTCGCT+TGG 0.369380 8:+9901693 MsG0880042516.01.T01:three_prime_UTR
TACATTTAAGCCATAGGAAA+TGG 0.371695 8:-9902207 None:intergenic
CAAGGTTTGTGTCTATTTGT+AGG 0.371889 8:+9902305 MsG0880042516.01.T01:three_prime_UTR
TTCTGTTCAGAACAACATAA+TGG 0.375005 8:+9900554 MsG0880042516.01.T01:CDS
TTAGAGTTGGCGTTGCAGTT+TGG 0.388357 8:+9900289 MsG0880042516.01.T01:CDS
AAAGAAATCCATTGGGAAAC+GGG 0.403363 8:+9898140 MsG0880042516.01.T01:CDS
GACTTGGGCTCTTCATTGGT+GGG 0.423694 8:+9898339 MsG0880042516.01.T01:CDS
GCATGTGATGTGATGGTTTG+TGG 0.425768 8:+9897634 None:intergenic
AGAACAACATAATGGAAATC+AGG 0.432759 8:+9900562 MsG0880042516.01.T01:CDS
CCGCTGCGACCGTAGGAGCC+TGG 0.434938 8:+9900634 MsG0880042516.01.T01:CDS
CTTAAATGTATATTAACAAA+GGG 0.439143 8:+9902220 MsG0880042516.01.T01:three_prime_UTR
AAGCAAGTGTTTCCTTTACA+TGG 0.446190 8:+9898200 MsG0880042516.01.T01:CDS
GGACTTGGGCTCTTCATTGG+TGG 0.446678 8:+9898338 MsG0880042516.01.T01:CDS
ATCAAAATTGCTGCAAGTCC+AGG 0.451481 8:-9901647 None:intergenic
AGGTATGGATTTACAATTTG+AGG 0.452054 8:+9897678 MsG0880042516.01.T01:CDS
TTGATGGAAAAGAAATCCAT+TGG 0.460719 8:+9898132 MsG0880042516.01.T01:CDS
AAGGTTTGTGTCTATTTGTA+GGG 0.464447 8:+9902306 MsG0880042516.01.T01:three_prime_UTR
TTAATATACATTTAAGCCAT+AGG 0.465996 8:-9902213 None:intergenic
CAAAATTACTAGCAGCTTCA+GGG 0.466053 8:-9900592 None:intergenic
GTCGCAGCGGCACGAGGGAC+AGG 0.476355 8:-9900621 None:intergenic
GAAAGAAACTTCTCAGGACT+TGG 0.477414 8:+9898323 MsG0880042516.01.T01:CDS
GCTTGGTTATATGATGAGGA+AGG 0.484436 8:+9901609 MsG0880042516.01.T01:CDS
AAAAGAAATCCATTGGGAAA+CGG 0.488975 8:+9898139 MsG0880042516.01.T01:CDS
GGTTGCAGATTTCTTAGAGT+TGG 0.489805 8:+9900276 MsG0880042516.01.T01:intron
TTTACAATTTGAGGTGGAAG+AGG 0.493377 8:+9897687 MsG0880042516.01.T01:CDS
AGACTAGAAAGAAACTTCTC+AGG 0.497960 8:+9898317 MsG0880042516.01.T01:CDS
CCTCGTGCCGCTGCGACCGT+AGG 0.498400 8:+9900627 MsG0880042516.01.T01:CDS
AACCGAACTTAATCAACAAA+AGG 0.504289 8:-9901682 None:intergenic
AAGGAACTTTGGAGAGATGA+AGG 0.511675 8:+9902083 MsG0880042516.01.T01:three_prime_UTR
TATGTTGTTCTGAACAGAAA+GGG 0.516559 8:-9900550 None:intergenic
TGATGGAAAAGAAATCCATT+GGG 0.521212 8:+9898133 MsG0880042516.01.T01:CDS
CCTACGGTCGCAGCGGCACG+AGG 0.522515 8:-9900627 None:intergenic
TATGTTAAGCCAGGCTCCTA+CGG 0.524156 8:-9900643 None:intergenic
CCAAGCTAAAAGAGCACAGT+TGG 0.526575 8:-9901592 None:intergenic
TACGAATAAATCTCGTCGAT+TGG 0.527002 8:-9898376 None:intergenic
CGGTTCGCTCTTACCCAAGC+AGG 0.529751 8:-9901991 None:intergenic
TTTATTCGTATTATGGGCAA+AGG 0.530187 8:+9898389 MsG0880042516.01.T01:CDS
AGAAGAAAGAAAGCTCAAGC+TGG 0.537251 8:+9902171 MsG0880042516.01.T01:three_prime_UTR
TACCTGAAATATGTTAAGCC+AGG 0.540655 8:-9900652 None:intergenic
CAGTATATTACTAAGATTGG+AGG 0.541175 8:+9899431 MsG0880042516.01.T01:CDS
AATCTTAGTAATATACTGAA+TGG 0.542216 8:-9899426 None:intergenic
GCTTAAATGTATATTAACAA+AGG 0.544432 8:+9902219 MsG0880042516.01.T01:three_prime_UTR
TCATTCTCCCCGTTTCCCAA+TGG 0.545660 8:-9898148 None:intergenic
TTTAGCTTGGTTATATGATG+AGG 0.560422 8:+9901605 MsG0880042516.01.T01:CDS
CTTGGTTATATGATGAGGAA+GGG 0.569347 8:+9901610 MsG0880042516.01.T01:CDS
TTATGTTGTTCTGAACAGAA+AGG 0.578686 8:-9900551 None:intergenic
TATGGATTTACAATTTGAGG+TGG 0.581553 8:+9897681 MsG0880042516.01.T01:CDS
GTTCGCTCGCTTGGTTCCTG+AGG 0.583346 8:+9901702 MsG0880042516.01.T01:three_prime_UTR
CTTTGGAGAGATGAAGGTGA+AGG 0.585260 8:+9902089 MsG0880042516.01.T01:three_prime_UTR
AGGGAATGAAAAGTAGAACC+TGG 0.604329 8:+9901629 MsG0880042516.01.T01:exon
GAAACACACTACACAGGCAC+AGG 0.604370 8:+9902017 MsG0880042516.01.T01:three_prime_UTR
ACGGCAGCAAAAGCAAATGC+AGG 0.605767 8:-9900343 None:intergenic
AAAGAAACTTCTCAGGACTT+GGG 0.607875 8:+9898324 MsG0880042516.01.T01:CDS
GCAGCAAAAGCAAATGCAGG+TGG 0.608053 8:-9900340 None:intergenic
TCAAAATGTCAATGAACACA+AGG 0.610962 8:+9902287 MsG0880042516.01.T01:three_prime_UTR
CAACTGAAAATAGAACCATC+AGG 0.614325 8:-9897730 None:intergenic
TCAAATTGTAAATCCATACC+TGG 0.616032 8:-9897676 None:intergenic
CCTGTGTAGTGTGTTTCACA+CGG 0.619099 8:-9902011 None:intergenic
CCAGGCTCCTACGGTCGCAG+CGG 0.622576 8:-9900634 None:intergenic
CAGCAAAAGCAAATGCAGGT+GGG 0.641926 8:-9900339 None:intergenic
TTAAATGTATATTAACAAAG+GGG 0.643984 8:+9902221 MsG0880042516.01.T01:three_prime_UTR
AAGAAATCCATTGGGAAACG+GGG 0.651527 8:+9898141 MsG0880042516.01.T01:CDS
GCTTTCGTGAAACAACCTGA+TGG 0.657433 8:+9897715 MsG0880042516.01.T01:CDS
CCGTGTGAAACACACTACAC+AGG 0.677117 8:+9902011 MsG0880042516.01.T01:three_prime_UTR
CTACGGTCGCAGCGGCACGA+GGG 0.695897 8:-9900626 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGATAAATTAATTACTTAA+TGG - Chr8:9899931-9899950 None:intergenic 10.0%
!! AATAAAAATAAAATAACCAT+AGG - Chr8:9899553-9899572 None:intergenic 10.0%
!!! CATTTTATTATTTATTTTGA+AGG + Chr8:9902369-9902388 MsG0880042516.01.T01:three_prime_UTR 10.0%
!! AAAAAAAAAATACCATGTAA+AGG - Chr8:9898215-9898234 None:intergenic 15.0%
!! CTTAAATGTATATTAACAAA+GGG + Chr8:9902220-9902239 MsG0880042516.01.T01:three_prime_UTR 15.0%
!! TTAAATGTATATTAACAAAG+GGG + Chr8:9902221-9902240 MsG0880042516.01.T01:three_prime_UTR 15.0%
!!! ATAGATCATTTACTTTTAAT+TGG + Chr8:9901371-9901390 MsG0880042516.01.T01:intron 15.0%
!!! CTTTTTTTGCAATATATTTA+TGG + Chr8:9899234-9899253 MsG0880042516.01.T01:intron 15.0%
!! AATCTTAGTAATATACTGAA+TGG - Chr8:9899429-9899448 None:intergenic 20.0%
!! AGATAAAAGAATTTATACCA+CGG - Chr8:9900365-9900384 None:intergenic 20.0%
!! ATGTTAATGTCAATGTAATT+AGG + Chr8:9900921-9900940 MsG0880042516.01.T01:intron 20.0%
!! ATTCAGTATATTACTAAGAT+TGG + Chr8:9899428-9899447 MsG0880042516.01.T01:CDS 20.0%
!! CATGGAAATGAATTATTATT+TGG - Chr8:9901755-9901774 None:intergenic 20.0%
!! GCTTAAATGTATATTAACAA+AGG + Chr8:9902219-9902238 MsG0880042516.01.T01:three_prime_UTR 20.0%
!! GTTATTAAATTCTTGAACAA+TGG + Chr8:9900128-9900147 MsG0880042516.01.T01:intron 20.0%
!! TAAAAAGTCTGGTTAAATAT+GGG - Chr8:9901888-9901907 None:intergenic 20.0%
!! TAAATCTAGAGAAAATTTGA+AGG - Chr8:9898249-9898268 None:intergenic 20.0%
!! TAATCATCAACAATATAAAG+TGG - Chr8:9900728-9900747 None:intergenic 20.0%
!! TAATGAATCATATAATCATC+AGG - Chr8:9898663-9898682 None:intergenic 20.0%
!! TATATGATTCATTACATTTC+AGG + Chr8:9898669-9898688 MsG0880042516.01.T01:intron 20.0%
!! TTAATATACATTTAAGCCAT+AGG - Chr8:9902216-9902235 None:intergenic 20.0%
!!! AACTTTTATTTTGAATTTGC+AGG + Chr8:9898076-9898095 MsG0880042516.01.T01:intron 20.0%
!!! AATAAGTTGAAAATAGCTTA+TGG + Chr8:9897932-9897951 MsG0880042516.01.T01:intron 20.0%
!!! ACTTTATATTGTTGATGATT+AGG + Chr8:9900727-9900746 MsG0880042516.01.T01:intron 20.0%
!!! ATTTTACGTAGTAGATTATT+TGG - Chr8:9900765-9900784 None:intergenic 20.0%
!!! TTCTTTTCCATCAAATTTAA+GGG - Chr8:9898126-9898145 None:intergenic 20.0%
!!! TTTAAGTTTCAATTGATGAA+GGG + Chr8:9900818-9900837 MsG0880042516.01.T01:intron 20.0%
!!! TTTCTTTTCCATCAAATTTA+AGG - Chr8:9898127-9898146 None:intergenic 20.0%
!!! TTTTAAGTTTCAATTGATGA+AGG + Chr8:9900817-9900836 MsG0880042516.01.T01:intron 20.0%
! AAAACATCTACTTTCTATCA+TGG - Chr8:9901773-9901792 None:intergenic 25.0%
! AAAGTTAAAGACATGTCAAT+AGG - Chr8:9898062-9898081 None:intergenic 25.0%
! AACCCAAATAATTAAAGCAA+GGG - Chr8:9899374-9899393 None:intergenic 25.0%
! AACGATATAAACTTTCACAA+AGG - Chr8:9900519-9900538 None:intergenic 25.0%
! ACGAGATTTATTCGTATTAT+GGG + Chr8:9898383-9898402 MsG0880042516.01.T01:CDS 25.0%
! AGATTCTCACTTATATACAT+CGG - Chr8:9899155-9899174 None:intergenic 25.0%
! AGCGTTTATTATTAGTTAAG+TGG - Chr8:9900429-9900448 None:intergenic 25.0%
! ATGATCTATCTTTAGACTTA+TGG - Chr8:9901360-9901379 None:intergenic 25.0%
! ATTAACATAACCGGAATTTA+TGG - Chr8:9900909-9900928 None:intergenic 25.0%
! ATTACTTAATGGTTGCAATA+CGG - Chr8:9899920-9899939 None:intergenic 25.0%
! CTAAAAAGTCTGGTTAAATA+TGG - Chr8:9901889-9901908 None:intergenic 25.0%
! CTTACTACTACGTAATAAAT+AGG + Chr8:9901311-9901330 MsG0880042516.01.T01:intron 25.0%
! GTAAGTAGAAATGTTATCAA+TGG - Chr8:9901296-9901315 None:intergenic 25.0%
! TACATTGACATTAACATAAC+CGG - Chr8:9900918-9900937 None:intergenic 25.0%
! TATCAGTCTCAAATACTTTA+AGG - Chr8:9898989-9899008 None:intergenic 25.0%
! TGAACAATGGAATATTTGTA+TGG + Chr8:9900141-9900160 MsG0880042516.01.T01:intron 25.0%
! TTCATAATAGTCATGTCAAT+AGG - Chr8:9898015-9898034 None:intergenic 25.0%
! TTGACATGACTATTATGAAA+CGG + Chr8:9898016-9898035 MsG0880042516.01.T01:intron 25.0%
!! AATTGAGAGTATAACAGATT+TGG - Chr8:9900101-9900120 None:intergenic 25.0%
!! ACGTTGAAATGTGAAAATTT+TGG - Chr8:9900797-9900816 None:intergenic 25.0%
!! AGGGAGAAATTTATATGTTT+TGG + Chr8:9902389-9902408 MsG0880042516.01.T01:three_prime_UTR 25.0%
!! ATTATCATTTTCATATCGTG+TGG - Chr8:9898437-9898456 None:intergenic 25.0%
!! TATTTTATGCAGACATACAT+TGG + Chr8:9899632-9899651 MsG0880042516.01.T01:intron 25.0%
!! TCTAATTTTCTCTTGCTTTA+GGG + Chr8:9899741-9899760 MsG0880042516.01.T01:intron 25.0%
!! TTCTAATTTTCTCTTGCTTT+AGG + Chr8:9899740-9899759 MsG0880042516.01.T01:intron 25.0%
!!! ATTTCAGGTATTTATTTTGC+AGG + Chr8:9900665-9900684 MsG0880042516.01.T01:intron 25.0%
!!! CATTGCAATTGATTGATTTT+AGG + Chr8:9898575-9898594 MsG0880042516.01.T01:intron 25.0%
!!! CTTTGTTTAGCTTTTGTTAT+AGG - Chr8:9897851-9897870 None:intergenic 25.0%
!!! GAAAACATTTTTTCAGGTTT+TGG + Chr8:9899790-9899809 MsG0880042516.01.T01:intron 25.0%
!!! GTAACAGAAAACATTTTTTC+AGG + Chr8:9899784-9899803 MsG0880042516.01.T01:intron 25.0%
!!! TATCTTTCCTTGCTTATTTT+TGG + Chr8:9900380-9900399 MsG0880042516.01.T01:intron 25.0%
!!! TTATATATCTCACTGATTTG+AGG + Chr8:9901525-9901544 MsG0880042516.01.T01:intron 25.0%
!!! TTTACTTTTAATTGGTGAAG+TGG + Chr8:9901379-9901398 MsG0880042516.01.T01:intron 25.0%
AAAAGAAATCCATTGGGAAA+CGG + Chr8:9898139-9898158 MsG0880042516.01.T01:CDS 30.0%
AAAAGAATACCTAGCTTAGT+GGG - Chr8:9899894-9899913 None:intergenic 30.0%
AAAGTAGAATCACAACAAGA+AGG - Chr8:9899186-9899205 None:intergenic 30.0%
AACAACGAAACACTGAAAAA+CGG + Chr8:9899484-9899503 MsG0880042516.01.T01:intron 30.0%
AACCGAACTTAATCAACAAA+AGG - Chr8:9901685-9901704 None:intergenic 30.0%
AAGGTTTGTGTCTATTTGTA+GGG + Chr8:9902306-9902325 MsG0880042516.01.T01:three_prime_UTR 30.0%
AAGTATTTCAGAGATATGAG+TGG + Chr8:9899024-9899043 MsG0880042516.01.T01:intron 30.0%
AGGTATGGATTTACAATTTG+AGG + Chr8:9897678-9897697 MsG0880042516.01.T01:CDS 30.0%
AGTCCTATGAGTCTATTATT+CGG + Chr8:9899269-9899288 MsG0880042516.01.T01:intron 30.0%
ATAAGCTGAAAACAGCTTAT+AGG + Chr8:9901063-9901082 MsG0880042516.01.T01:intron 30.0%
CAGTATATTACTAAGATTGG+AGG + Chr8:9899431-9899450 MsG0880042516.01.T01:CDS 30.0%
CATATCCACCAAAAAAAACA+TGG - Chr8:9901244-9901263 None:intergenic 30.0%
CTGACTGAAAAATTCTAATC+TGG + Chr8:9900255-9900274 MsG0880042516.01.T01:intron 30.0%
CTTATTTCAATAAGATCTCC+AGG - Chr8:9897918-9897937 None:intergenic 30.0%
GAACCCAAATAATTAAAGCA+AGG - Chr8:9899375-9899394 None:intergenic 30.0%
GACCCTTGCTTTAATTATTT+GGG + Chr8:9899369-9899388 MsG0880042516.01.T01:intron 30.0%
GACGAGATTTATTCGTATTA+TGG + Chr8:9898382-9898401 MsG0880042516.01.T01:CDS 30.0%
GTGAAAGATTTATGTACTGT+TGG + Chr8:9901405-9901424 MsG0880042516.01.T01:intron 30.0%
GTGATAACCCTTAAATTTGA+TGG + Chr8:9898116-9898135 MsG0880042516.01.T01:CDS 30.0%
GTGCTTATACTATAGCTTAT+AGG - Chr8:9897811-9897830 None:intergenic 30.0%
TAAAAGAATACCTAGCTTAG+TGG - Chr8:9899895-9899914 None:intergenic 30.0%
TACATTTAAGCCATAGGAAA+TGG - Chr8:9902210-9902229 None:intergenic 30.0%
TATGGATTTACAATTTGAGG+TGG + Chr8:9897681-9897700 MsG0880042516.01.T01:CDS 30.0%
TCAAAATGTCAATGAACACA+AGG + Chr8:9902287-9902306 MsG0880042516.01.T01:three_prime_UTR 30.0%
TCAAATTGTAAATCCATACC+TGG - Chr8:9897679-9897698 None:intergenic 30.0%
TCAAGGATGACATACAAAAT+CGG - Chr8:9901031-9901050 None:intergenic 30.0%
TGACCCTTGCTTTAATTATT+TGG + Chr8:9899368-9899387 MsG0880042516.01.T01:intron 30.0%
TGATGGAAAAGAAATCCATT+GGG + Chr8:9898133-9898152 MsG0880042516.01.T01:CDS 30.0%
TTATAGCTGTACTTGAGATA+AGG - Chr8:9899839-9899858 None:intergenic 30.0%
TTCTGTTCAGAACAACATAA+TGG + Chr8:9900554-9900573 MsG0880042516.01.T01:CDS 30.0%
TTGATGGAAAAGAAATCCAT+TGG + Chr8:9898132-9898151 MsG0880042516.01.T01:CDS 30.0%
TTGCAAAAATAAAGAAGCTG+TGG - Chr8:9898636-9898655 None:intergenic 30.0%
TTGTCAGTGTTGTCAAATAT+CGG + Chr8:9901142-9901161 MsG0880042516.01.T01:intron 30.0%
TTTATTCGTATTATGGGCAA+AGG + Chr8:9898389-9898408 MsG0880042516.01.T01:CDS 30.0%
! AATACTTTAAGGAGTTCCAT+TGG - Chr8:9898978-9898997 None:intergenic 30.0%
! AATTATTTGGGTTCAGGTTT+GGG + Chr8:9899381-9899400 MsG0880042516.01.T01:intron 30.0%
! ACATTTCAGGTCAATGAAAT+TGG + Chr8:9898682-9898701 MsG0880042516.01.T01:intron 30.0%
! AGAACAACATAATGGAAATC+AGG + Chr8:9900562-9900581 MsG0880042516.01.T01:CDS 30.0%
! CTGTAATGTTTTGTCAATTC+TGG + Chr8:9898743-9898762 MsG0880042516.01.T01:intron 30.0%
! TAATTATTTGGGTTCAGGTT+TGG + Chr8:9899380-9899399 MsG0880042516.01.T01:intron 30.0%
! TATGTTGTTCTGAACAGAAA+GGG - Chr8:9900553-9900572 None:intergenic 30.0%
! TGCTACTGTCATTTGATATA+TGG + Chr8:9897769-9897788 MsG0880042516.01.T01:CDS 30.0%
! TGCTTTAATTATTTGGGTTC+AGG + Chr8:9899375-9899394 MsG0880042516.01.T01:intron 30.0%
! TTATGTTGTTCTGAACAGAA+AGG - Chr8:9900554-9900573 None:intergenic 30.0%
!! GCAGTATATTTTGCTTTTCT+TGG + Chr8:9898508-9898527 MsG0880042516.01.T01:intron 30.0%
!! GTCCTTTTGTTGATTAAGTT+CGG + Chr8:9901680-9901699 MsG0880042516.01.T01:three_prime_UTR 30.0%
!! TCAATGCATTCACTTTTCTT+AGG + Chr8:9898831-9898850 MsG0880042516.01.T01:intron 30.0%
!! TTTAGCTTGGTTATATGATG+AGG + Chr8:9901605-9901624 MsG0880042516.01.T01:CDS 30.0%
!! TTTGTTTTCTCCATTTCCTA+TGG + Chr8:9902197-9902216 MsG0880042516.01.T01:three_prime_UTR 30.0%
!!! CATGTTTTTTTTGGTGGATA+TGG + Chr8:9901242-9901261 MsG0880042516.01.T01:intron 30.0%
!!! GTATTTATTTTGCAGGACTT+TGG + Chr8:9900672-9900691 MsG0880042516.01.T01:intron 30.0%
!!! TGTGTTCTAAGAAGCTTTTA+AGG + Chr8:9902043-9902062 MsG0880042516.01.T01:three_prime_UTR 30.0%
!!! TTTAACCAGACTTTTTAGCT+CGG + Chr8:9901891-9901910 MsG0880042516.01.T01:intron 30.0%
!!! TTTTCAGGTTTTGGAAAACT+TGG + Chr8:9899799-9899818 MsG0880042516.01.T01:intron 30.0%
AAAGAAACTTCTCAGGACTT+GGG + Chr8:9898324-9898343 MsG0880042516.01.T01:CDS 35.0%
AAAGAAATCCATTGGGAAAC+GGG + Chr8:9898140-9898159 MsG0880042516.01.T01:CDS 35.0%
AAAGAATACCTAGCTTAGTG+GGG - Chr8:9899893-9899912 None:intergenic 35.0%
AAGCAAGTGTTTCCTTTACA+TGG + Chr8:9898200-9898219 MsG0880042516.01.T01:CDS 35.0%
AGACTAGAAAGAAACTTCTC+AGG + Chr8:9898317-9898336 MsG0880042516.01.T01:CDS 35.0%
AGAGGAAAAACATCTCAGAA+AGG - Chr8:9898866-9898885 None:intergenic 35.0%
AGTAAGTCATTACTAGAACC+TGG - Chr8:9898794-9898813 None:intergenic 35.0%
ATAATTCACAGTGTGACATC+AGG - Chr8:9901509-9901528 None:intergenic 35.0%
ATCACCACTACAAAGAAAAC+AGG - Chr8:9898715-9898734 None:intergenic 35.0%
CAAAAATAAAGAAGCTGTGG+TGG - Chr8:9898633-9898652 None:intergenic 35.0%
CAAAATTACTAGCAGCTTCA+GGG - Chr8:9900595-9900614 None:intergenic 35.0%
CAACTGAAAATAGAACCATC+AGG - Chr8:9897733-9897752 None:intergenic 35.0%
CAAGGTTTGTGTCTATTTGT+AGG + Chr8:9902305-9902324 MsG0880042516.01.T01:three_prime_UTR 35.0%
CAGGTTCCTACAAAAGAAAA+CGG - Chr8:9901975-9901994 None:intergenic 35.0%
CTATCCTTCAAAAATGGTCA+TGG - Chr8:9901216-9901235 None:intergenic 35.0%
CTGTTACTACACAATCTCAA+GGG - Chr8:9899771-9899790 None:intergenic 35.0%
CTTATTTCCATAAGCTCTCA+AGG - Chr8:9901048-9901067 None:intergenic 35.0%
CTTGGTTATATGATGAGGAA+GGG + Chr8:9901610-9901629 MsG0880042516.01.T01:CDS 35.0%
CTTTGTAGTGGTGATACTTT+GGG + Chr8:9898720-9898739 MsG0880042516.01.T01:intron 35.0%
GAGGAAAAACATCTCAGAAA+GGG - Chr8:9898865-9898884 None:intergenic 35.0%
GGCCATAACTTATGTGAAAA+CGG - Chr8:9901010-9901029 None:intergenic 35.0%
GTGAGAAACTGCAAAAATCA+AGG - Chr8:9901555-9901574 None:intergenic 35.0%
TACCTGAAATATGTTAAGCC+AGG - Chr8:9900655-9900674 None:intergenic 35.0%
TACGAATAAATCTCGTCGAT+TGG - Chr8:9898379-9898398 None:intergenic 35.0%
TACGCTCATCTTTATGAAGT+TGG + Chr8:9899127-9899146 MsG0880042516.01.T01:intron 35.0%
TATCCATTCTCCTTATCCTA+CGG + Chr8:9898457-9898476 MsG0880042516.01.T01:intron 35.0%
TATTACTAAGATTGGAGGTC+AGG + Chr8:9899436-9899455 MsG0880042516.01.T01:intron 35.0%
TCAAAATTACTAGCAGCTTC+AGG - Chr8:9900596-9900615 None:intergenic 35.0%
TCGATTGATGCCATAAATTC+CGG + Chr8:9900896-9900915 MsG0880042516.01.T01:intron 35.0%
TCGCGTTGTTAGAACTAAAA+TGG + Chr8:9900177-9900196 MsG0880042516.01.T01:intron 35.0%
TCTGTTACTACACAATCTCA+AGG - Chr8:9899772-9899791 None:intergenic 35.0%
TCTTTGTAGTGGTGATACTT+TGG + Chr8:9898719-9898738 MsG0880042516.01.T01:intron 35.0%
TGAAAAGTTACGATGCAACA+AGG - Chr8:9899671-9899690 None:intergenic 35.0%
TTCAGAGATATGAGTGGTTA+GGG + Chr8:9899030-9899049 MsG0880042516.01.T01:intron 35.0%
TTCAGTAAGCATTACAAGAC+TGG + Chr8:9900217-9900236 MsG0880042516.01.T01:intron 35.0%
TTGAAAAGCTGTAAGCTGTT+TGG - Chr8:9901118-9901137 None:intergenic 35.0%
TTGAGACTGATAGAGCAAAA+GGG + Chr8:9898997-9899016 MsG0880042516.01.T01:intron 35.0%
TTGGTCTACAAGGTGATAAT+GGG + Chr8:9899516-9899535 MsG0880042516.01.T01:intron 35.0%
TTTCAGAGATATGAGTGGTT+AGG + Chr8:9899029-9899048 MsG0880042516.01.T01:intron 35.0%
! CTAGTTCTTCTGACAAACTA+AGG + Chr8:9901947-9901966 MsG0880042516.01.T01:intron 35.0%
! GAAGTGCTTCATCATTTAGA+TGG + Chr8:9901471-9901490 MsG0880042516.01.T01:intron 35.0%
! GCTATAAAAAGTACAGCGTT+CGG + Chr8:9899852-9899871 MsG0880042516.01.T01:intron 35.0%
! GTAGGGATGTTTTTCTTTTG+TGG + Chr8:9902323-9902342 MsG0880042516.01.T01:three_prime_UTR 35.0%
! TTTACAATTTGAGGTGGAAG+AGG + Chr8:9897687-9897706 MsG0880042516.01.T01:CDS 35.0%
! TTTGAGACTGATAGAGCAAA+AGG + Chr8:9898996-9899015 MsG0880042516.01.T01:intron 35.0%
!! AACACCATGACCATTTTTGA+AGG + Chr8:9901209-9901228 MsG0880042516.01.T01:intron 35.0%
!! AAGCTTTTAAGGACAATCTC+CGG + Chr8:9902054-9902073 MsG0880042516.01.T01:three_prime_UTR 35.0%
!! ACTTGCAGCAATTTTGATCA+TGG + Chr8:9901652-9901671 MsG0880042516.01.T01:three_prime_UTR 35.0%
!! AGCCGTTTTCACATAAGTTA+TGG + Chr8:9901005-9901024 MsG0880042516.01.T01:intron 35.0%
!! AGCTGCTAGTAATTTTGAGA+CGG + Chr8:9900598-9900617 MsG0880042516.01.T01:CDS 35.0%
!! AGGTGATAATGGGAATTAGT+AGG + Chr8:9899526-9899545 MsG0880042516.01.T01:intron 35.0%
!! CTGATGGTTCTATTTTCAGT+TGG + Chr8:9897731-9897750 MsG0880042516.01.T01:CDS 35.0%
!! CTTGAAGATGGGTTATTTGA+TGG + Chr8:9900070-9900089 MsG0880042516.01.T01:intron 35.0%
!! CTTTAGACTTATGGCTTGTT+TGG - Chr8:9901351-9901370 None:intergenic 35.0%
!! TTATTTTGCAGGACTTTGGA+AGG + Chr8:9900676-9900695 MsG0880042516.01.T01:intron 35.0%
!!! AAGGTACCGTTTTCTTTTGT+AGG + Chr8:9901966-9901985 MsG0880042516.01.T01:intron 35.0%
!!! CTTTCCTTGCTTATTTTTGG+AGG + Chr8:9900383-9900402 MsG0880042516.01.T01:intron 35.0%
!!! GTTTTTTTTGGTGGATATGG+CGG + Chr8:9901245-9901264 MsG0880042516.01.T01:intron 35.0%
!!! TAGCGACACCATGTTTTTTT+TGG + Chr8:9901233-9901252 MsG0880042516.01.T01:intron 35.0%
!!! TTCGCAAAGTTTTGATTCAG+CGG + Chr8:9899695-9899714 MsG0880042516.01.T01:intron 35.0%
AAAATTCAGCACTTCTAGCC+AGG + Chr8:9898773-9898792 MsG0880042516.01.T01:intron 40.0%
AAGAAATCCATTGGGAAACG+GGG + Chr8:9898141-9898160 MsG0880042516.01.T01:CDS 40.0%
AAGAATACCTAGCTTAGTGG+GGG - Chr8:9899892-9899911 None:intergenic 40.0%
ACAGCCTCCAAAAATAAGCA+AGG - Chr8:9900390-9900409 None:intergenic 40.0%
ACATACACTACTAGCCAGAT+TGG - Chr8:9898605-9898624 None:intergenic 40.0%
AGAAGAAAGAAAGCTCAAGC+TGG + Chr8:9902171-9902190 MsG0880042516.01.T01:three_prime_UTR 40.0%
AGAGAAGAAACAATCACCTC+AGG - Chr8:9901721-9901740 None:intergenic 40.0%
AGCCTGGCTTAACATATTTC+AGG + Chr8:9900650-9900669 MsG0880042516.01.T01:CDS 40.0%
AGCTTAGTGGGGGATATATA+AGG - Chr8:9899882-9899901 None:intergenic 40.0%
ATCAAAATTGCTGCAAGTCC+AGG - Chr8:9901650-9901669 None:intergenic 40.0%
ATCCAGGATACAAGATTCCA+GGG + Chr8:9898928-9898947 MsG0880042516.01.T01:intron 40.0%
ATGGGAATTAGTAGGTCCTA+TGG + Chr8:9899534-9899553 MsG0880042516.01.T01:intron 40.0%
ATGTCATCCTTGAGAGCTTA+TGG + Chr8:9901038-9901057 MsG0880042516.01.T01:intron 40.0%
ATGTTATCAATGGCAGACCA+TGG - Chr8:9901286-9901305 None:intergenic 40.0%
ATTCATTCATTCGTAGCCGT+AGG - Chr8:9898476-9898495 None:intergenic 40.0%
CACAAGAAGAAGAGAGAGAA+AGG + Chr8:9899964-9899983 MsG0880042516.01.T01:intron 40.0%
CTTGGTCTACAAGGTGATAA+TGG + Chr8:9899515-9899534 MsG0880042516.01.T01:intron 40.0%
GAAAGAAACTTCTCAGGACT+TGG + Chr8:9898323-9898342 MsG0880042516.01.T01:CDS 40.0%
GACTATTATGAAACGGAAGC+TGG + Chr8:9898023-9898042 MsG0880042516.01.T01:intron 40.0%
GCACCGAATAATAGACTCAT+AGG - Chr8:9899275-9899294 None:intergenic 40.0%
GCTTGGTTATATGATGAGGA+AGG + Chr8:9901609-9901628 MsG0880042516.01.T01:CDS 40.0%
GGGGAGAATGATTCAGAAAT+TGG + Chr8:9898160-9898179 MsG0880042516.01.T01:CDS 40.0%
GGTTGCAGATTTCTTAGAGT+TGG + Chr8:9900276-9900295 MsG0880042516.01.T01:intron 40.0%
TATATATCCCCCACTAAGCT+AGG + Chr8:9899882-9899901 MsG0880042516.01.T01:intron 40.0%
TGAGCTTTCTTTCTTCTTGC+TGG - Chr8:9902168-9902187 None:intergenic 40.0%
TTCTTGGAATGTACACACGA+TGG + Chr8:9898524-9898543 MsG0880042516.01.T01:intron 40.0%
TTGTGAGAGATGACACTAAC+AGG + Chr8:9901791-9901810 MsG0880042516.01.T01:intron 40.0%
! AAGGAACTTTGGAGAGATGA+AGG + Chr8:9902083-9902102 MsG0880042516.01.T01:three_prime_UTR 40.0%
! ACTTTAAGGAGTTCCATTGG+TGG - Chr8:9898975-9898994 None:intergenic 40.0%
! GCTTCCTGTTTTCTTTGTAG+TGG + Chr8:9898708-9898727 MsG0880042516.01.T01:intron 40.0%
! GTGTCGCTATCCTTCAAAAA+TGG - Chr8:9901222-9901241 None:intergenic 40.0%
! TCCAAAGTTCCTTTTTCCTC+CGG - Chr8:9902076-9902095 None:intergenic 40.0%
! TCTTTTGTAGGAACCTGCTT+GGG + Chr8:9901978-9901997 MsG0880042516.01.T01:intron 40.0%
! TTCTTTTGTAGGAACCTGCT+TGG + Chr8:9901977-9901996 MsG0880042516.01.T01:intron 40.0%
!! GTTGTTTTCACAAGTGATCC+TGG + Chr8:9897897-9897916 MsG0880042516.01.T01:intron 40.0%
!! TGATTTTAGGTGAGCCAATC+TGG + Chr8:9898588-9898607 MsG0880042516.01.T01:intron 40.0%
!!! CGACACCATGTTTTTTTTGG+TGG + Chr8:9901236-9901255 MsG0880042516.01.T01:intron 40.0%
!!! TCAGGTTTTGGAAAACTTGG+TGG + Chr8:9899802-9899821 MsG0880042516.01.T01:intron 40.0%
AACAGGTAGAGCCAGGAAAA+TGG + Chr8:9901808-9901827 MsG0880042516.01.T01:intron 45.0%
AACTAGCAAAACGAGCTACC+TGG - Chr8:9901933-9901952 None:intergenic 45.0%
ACAGGTAGAGCCAGGAAAAT+GGG + Chr8:9901809-9901828 MsG0880042516.01.T01:intron 45.0%
AGACTGTCTTGGAGAGCTTA+TGG - Chr8:9897976-9897995 None:intergenic 45.0%
AGCCAACATTAAGCCAAGCA+AGG - Chr8:9900470-9900489 None:intergenic 45.0%
ATACAAGATTCCAGGGAGGA+AGG + Chr8:9898935-9898954 MsG0880042516.01.T01:intron 45.0%
ATGTAAGTCCAAATGCAGCG+AGG - Chr8:9898558-9898577 None:intergenic 45.0%
CAGCAAAAGCAAATGCAGGT+GGG - Chr8:9900342-9900361 None:intergenic 45.0%
CCAACATTAAGCCAAGCAAG+GGG - Chr8:9900468-9900487 None:intergenic 45.0%
CCTGTGTAGTGTGTTTCACA+CGG - Chr8:9902014-9902033 None:intergenic 45.0%
CGATTCATGTAGCCACCTAA+CGG - Chr8:9900879-9900898 None:intergenic 45.0%
CTTCTTACTCTGCCAGCATT+GGG + Chr8:9900041-9900060 MsG0880042516.01.T01:intron 45.0%
GACTGATAGAGCAAAAGGGA+AGG + Chr8:9899001-9899020 MsG0880042516.01.T01:intron 45.0%
GACTTTCTTCTGCAGGTGTT+TGG + Chr8:9899605-9899624 MsG0880042516.01.T01:intron 45.0%
GATCCAGGATACAAGATTCC+AGG + Chr8:9898927-9898946 MsG0880042516.01.T01:intron 45.0%
GATTCATGTAGCCACCTAAC+GGG - Chr8:9900878-9900897 None:intergenic 45.0%
GCCAACATTAAGCCAAGCAA+GGG - Chr8:9900469-9900488 None:intergenic 45.0%
GCTTTCGTGAAACAACCTGA+TGG + Chr8:9897715-9897734 MsG0880042516.01.T01:CDS 45.0%
TACAAGATTCCAGGGAGGAA+GGG + Chr8:9898936-9898955 MsG0880042516.01.T01:intron 45.0%
TAGCCGTAGGATAAGGAGAA+TGG - Chr8:9898463-9898482 None:intergenic 45.0%
TATGCCAACTCGAAGGTAAC+TGG - Chr8:9899109-9899128 None:intergenic 45.0%
TATGTTAAGCCAGGCTCCTA+CGG - Chr8:9900646-9900665 None:intergenic 45.0%
TCATTCGTAGCCGTAGGATA+AGG - Chr8:9898470-9898489 None:intergenic 45.0%
TCCGGAGGAAAAAGGAACTT+TGG + Chr8:9902072-9902091 MsG0880042516.01.T01:three_prime_UTR 45.0%
TGGCAGAGTAAGAAGGCTTT+AGG - Chr8:9900036-9900055 None:intergenic 45.0%
TTAGAGTTGGCGTTGCAGTT+TGG + Chr8:9900289-9900308 MsG0880042516.01.T01:CDS 45.0%
TTATCAATGGCAGACCATGG+CGG - Chr8:9901283-9901302 None:intergenic 45.0%
TTCTTACTCTGCCAGCATTG+GGG + Chr8:9900042-9900061 MsG0880042516.01.T01:intron 45.0%
! CCAAGCTAAAAGAGCACAGT+TGG - Chr8:9901595-9901614 None:intergenic 45.0%
! CTTTGGAGAGATGAAGGTGA+AGG + Chr8:9902089-9902108 MsG0880042516.01.T01:three_prime_UTR 45.0%
! GTTTTGTGCTATGCCAGGTA+TGG + Chr8:9897663-9897682 MsG0880042516.01.T01:CDS 45.0%
! TCTGTGTTTTGTGCTATGCC+AGG + Chr8:9897658-9897677 MsG0880042516.01.T01:CDS 45.0%
!! CCAACTGTGCTCTTTTAGCT+TGG + Chr8:9901592-9901611 MsG0880042516.01.T01:CDS 45.0%
!! CTTTTAAGGACAATCTCCGG+AGG + Chr8:9902057-9902076 MsG0880042516.01.T01:three_prime_UTR 45.0%
!!! TGGTGGATATGGCGGATTTT+TGG + Chr8:9901253-9901272 MsG0880042516.01.T01:intron 45.0%
!!! ATTTTATTATTTATTTTGAA+GGG + Chr8:9902370-9902389 MsG0880042516.01.T01:three_prime_UTR 5.0%
AACTGCACTGCAGAGCTAAG+AGG - Chr8:9898907-9898926 None:intergenic 50.0%
AAGTTCCCTACAGCCACCAA+TGG + Chr8:9898959-9898978 MsG0880042516.01.T01:intron 50.0%
ACGGCAGCAAAAGCAAATGC+AGG - Chr8:9900346-9900365 None:intergenic 50.0%
AGACGACGACTTTCTTCTGC+AGG + Chr8:9899598-9899617 MsG0880042516.01.T01:intron 50.0%
ATGAGCGTATGCCAACTCGA+AGG - Chr8:9899116-9899135 None:intergenic 50.0%
ATTGGGGAGGAGCTTGAAGA+TGG + Chr8:9900058-9900077 MsG0880042516.01.T01:intron 50.0%
CACCTTGTAGACCAAGCTGT+CGG - Chr8:9899511-9899530 None:intergenic 50.0%
CAGGATACAAGATTCCAGGG+AGG + Chr8:9898931-9898950 MsG0880042516.01.T01:intron 50.0%
CATTTGAACGACCCCTTGCT+TGG + Chr8:9900454-9900473 MsG0880042516.01.T01:intron 50.0%
CCAAGCCGAGCTAAAAAGTC+TGG - Chr8:9901899-9901918 None:intergenic 50.0%
CCAATGCTGGCAGAGTAAGA+AGG - Chr8:9900043-9900062 None:intergenic 50.0%
CCACCTAACGGGAAAAAGCA+CGG - Chr8:9900867-9900886 None:intergenic 50.0%
CCATCTGCAGAGAACATGAG+AGG - Chr8:9898884-9898903 None:intergenic 50.0%
CCCCTTGCTTGGCTTAATGT+TGG + Chr8:9900465-9900484 MsG0880042516.01.T01:intron 50.0%
CCGTGTGAAACACACTACAC+AGG + Chr8:9902011-9902030 MsG0880042516.01.T01:three_prime_UTR 50.0%
CCTCTCATGTTCTCTGCAGA+TGG + Chr8:9898881-9898900 MsG0880042516.01.T01:intron 50.0%
CCTTCTTACTCTGCCAGCAT+TGG + Chr8:9900040-9900059 MsG0880042516.01.T01:intron 50.0%
CTCCCTGGAATCTTGTATCC+TGG - Chr8:9898933-9898952 None:intergenic 50.0%
CTGTTCTTCCTCGCTGCATT+TGG + Chr8:9898547-9898566 MsG0880042516.01.T01:intron 50.0%
GAAAAGCAACCTCCGACAGA+AGG - Chr8:9899723-9899742 None:intergenic 50.0%
GAAACACACTACACAGGCAC+AGG + Chr8:9902017-9902036 MsG0880042516.01.T01:three_prime_UTR 50.0%
GACACGAAGAGAGACTGTCT+TGG - Chr8:9897987-9898006 None:intergenic 50.0%
GACTTGGGCTCTTCATTGGT+GGG + Chr8:9898339-9898358 MsG0880042516.01.T01:CDS 50.0%
GCAGCAAAAGCAAATGCAGG+TGG - Chr8:9900343-9900362 None:intergenic 50.0%
GGACAATCTCCGGAGGAAAA+AGG + Chr8:9902064-9902083 MsG0880042516.01.T01:three_prime_UTR 50.0%
GTCTCCAGTTACCTTCGAGT+TGG + Chr8:9899102-9899121 MsG0880042516.01.T01:intron 50.0%
TCAGGACTTGGGCTCTTCAT+TGG + Chr8:9898335-9898354 MsG0880042516.01.T01:CDS 50.0%
TCATTCTCCCCGTTTCCCAA+TGG - Chr8:9898151-9898170 None:intergenic 50.0%
TCTACCACTGCAATCCACCA+AGG - Chr8:9901179-9901198 None:intergenic 50.0%
TGAAAAACGGTCCGACAGCT+TGG + Chr8:9899497-9899516 MsG0880042516.01.T01:intron 50.0%
TGACACTAACAGGTAGAGCC+AGG + Chr8:9901801-9901820 MsG0880042516.01.T01:intron 50.0%
TTGGGGAGGAGCTTGAAGAT+GGG + Chr8:9900059-9900078 MsG0880042516.01.T01:intron 50.0%
! ACGGGAAAAAGCACGGTTGA+TGG - Chr8:9900860-9900879 None:intergenic 50.0%
! GAGTTCCATTGGTGGCTGTA+GGG - Chr8:9898967-9898986 None:intergenic 50.0%
! TTAAGTTCGGTTCGCTCGCT+TGG + Chr8:9901693-9901712 MsG0880042516.01.T01:three_prime_UTR 50.0%
!! TGCATTTGCTTTTGCTGCCG+TGG + Chr8:9900345-9900364 MsG0880042516.01.T01:CDS 50.0%
!!! CAACCGTGCTTTTTCCCGTT+AGG + Chr8:9900861-9900880 MsG0880042516.01.T01:intron 50.0%
!!! CCAGACTTTTTAGCTCGGCT+TGG + Chr8:9901896-9901915 MsG0880042516.01.T01:intron 50.0%
!!! GGATTTTTGGCTTTCCGCCA+TGG + Chr8:9901266-9901285 MsG0880042516.01.T01:intron 50.0%
AAGCCCAGCCCTACGCTTAT+TGG - Chr8:9901848-9901867 None:intergenic 55.0%
ACGAGCTACCTGGTCTGCAT+CGG - Chr8:9901923-9901942 None:intergenic 55.0%
AGCCCAGCCCTACGCTTATT+GGG - Chr8:9901847-9901866 None:intergenic 55.0%
ATAAGCGTAGGGCTGGGCTT+AGG + Chr8:9901848-9901867 MsG0880042516.01.T01:intron 55.0%
CTCTGCAGTGCAGTTGATCC+AGG + Chr8:9898912-9898931 MsG0880042516.01.T01:intron 55.0%
GATTCAGCGGCTCCTTCTGT+CGG + Chr8:9899708-9899727 MsG0880042516.01.T01:intron 55.0%
GGACTTGGGCTCTTCATTGG+TGG + Chr8:9898338-9898357 MsG0880042516.01.T01:CDS 55.0%
GTCCGACAGCTTGGTCTACA+AGG + Chr8:9899506-9899525 MsG0880042516.01.T01:intron 55.0%
TTCAAGCTCCTCCCCAATGC+TGG - Chr8:9900056-9900075 None:intergenic 55.0%
! GGAGTTCCATTGGTGGCTGT+AGG - Chr8:9898968-9898987 None:intergenic 55.0%
! TTACTCTGCCAGCATTGGGG+AGG + Chr8:9900045-9900064 MsG0880042516.01.T01:intron 55.0%
!! AATCCACCAAGGCATCGCGA+TGG - Chr8:9901168-9901187 None:intergenic 55.0%
!! GATGCCTTGGTGGATTGCAG+TGG + Chr8:9901172-9901191 MsG0880042516.01.T01:intron 55.0%
!!! CCGTGCTTTTTCCCGTTAGG+TGG + Chr8:9900864-9900883 MsG0880042516.01.T01:intron 55.0%
!!! GGTGGACTAGCCCATTTTCC+TGG - Chr8:9901822-9901841 None:intergenic 55.0%
AGGGAACTTCCCTTCCTCCC+TGG - Chr8:9898948-9898967 None:intergenic 60.0%
CAGCCCTACGCTTATTGGGG+CGG - Chr8:9901843-9901862 None:intergenic 60.0%
CCACCGCCCCAATAAGCGTA+GGG + Chr8:9901837-9901856 MsG0880042516.01.T01:intron 60.0%
CGAGCTACCTGGTCTGCATC+GGG - Chr8:9901922-9901941 None:intergenic 60.0%
CGGTTCGCTCTTACCCAAGC+AGG - Chr8:9901994-9902013 None:intergenic 60.0%
GCCCAGCCCTACGCTTATTG+GGG - Chr8:9901846-9901865 None:intergenic 60.0%
GCCCCAATAAGCGTAGGGCT+GGG + Chr8:9901842-9901861 MsG0880042516.01.T01:intron 60.0%
GTTCGCTCGCTTGGTTCCTG+AGG + Chr8:9901702-9901721 MsG0880042516.01.T01:three_prime_UTR 60.0%
TATCGGCCATCGCGATGCCT+TGG + Chr8:9901159-9901178 MsG0880042516.01.T01:intron 60.0%
TCCACCGCCCCAATAAGCGT+AGG + Chr8:9901836-9901855 MsG0880042516.01.T01:intron 60.0%
CCCTACGCTTATTGGGGCGG+TGG - Chr8:9901840-9901859 None:intergenic 65.0%
CGCCCCAATAAGCGTAGGGC+TGG + Chr8:9901841-9901860 MsG0880042516.01.T01:intron 65.0%
TCAGCGGCTCCTTCTGTCGG+AGG + Chr8:9899711-9899730 MsG0880042516.01.T01:intron 65.0%
CCAGGCTCCTACGGTCGCAG+CGG - Chr8:9900637-9900656 None:intergenic 70.0%
CGGCCATCGCGATGCCTTGG+TGG + Chr8:9901162-9901181 MsG0880042516.01.T01:intron 70.0%
CTACGGTCGCAGCGGCACGA+GGG - Chr8:9900629-9900648 None:intergenic 70.0%
GGCTTGGCCCGATGCAGACC+AGG + Chr8:9901912-9901931 MsG0880042516.01.T01:intron 70.0%
CCGCTGCGACCGTAGGAGCC+TGG + Chr8:9900634-9900653 MsG0880042516.01.T01:CDS 75.0%
CCTACGGTCGCAGCGGCACG+AGG - Chr8:9900630-9900649 None:intergenic 75.0%
GTCGCAGCGGCACGAGGGAC+AGG - Chr8:9900624-9900643 None:intergenic 75.0%
! CCTCGTGCCGCTGCGACCGT+AGG + Chr8:9900627-9900646 MsG0880042516.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr8 gene 9897646 9902464 9897646 ID=MsG0880042516.01;Name=MsG0880042516.01
Chr8 mRNA 9897646 9902464 9897646 ID=MsG0880042516.01.T01;Parent=MsG0880042516.01;Name=MsG0880042516.01.T01;_AED=0.50;_eAED=0.51;_QI=0|0.57|0.62|1|0.42|0.5|8|556|237
Chr8 exon 9901988 9902464 9901988 ID=MsG0880042516.01.T01:exon:2829;Parent=MsG0880042516.01.T01
Chr8 exon 9901567 9901723 9901567 ID=MsG0880042516.01.T01:exon:2828;Parent=MsG0880042516.01.T01
Chr8 exon 9900549 9900671 9900549 ID=MsG0880042516.01.T01:exon:2827;Parent=MsG0880042516.01.T01
Chr8 exon 9900284 9900366 9900284 ID=MsG0880042516.01.T01:exon:2826;Parent=MsG0880042516.01.T01
Chr8 exon 9899397 9899452 9899397 ID=MsG0880042516.01.T01:exon:2825;Parent=MsG0880042516.01.T01
Chr8 exon 9898311 9898410 9898311 ID=MsG0880042516.01.T01:exon:2824;Parent=MsG0880042516.01.T01
Chr8 exon 9898098 9898221 9898098 ID=MsG0880042516.01.T01:exon:2823;Parent=MsG0880042516.01.T01
Chr8 exon 9897646 9897795 9897646 ID=MsG0880042516.01.T01:exon:2822;Parent=MsG0880042516.01.T01
Chr8 CDS 9897646 9897795 9897646 ID=MsG0880042516.01.T01:cds;Parent=MsG0880042516.01.T01
Chr8 CDS 9898098 9898221 9898098 ID=MsG0880042516.01.T01:cds;Parent=MsG0880042516.01.T01
Chr8 CDS 9898311 9898410 9898311 ID=MsG0880042516.01.T01:cds;Parent=MsG0880042516.01.T01
Chr8 CDS 9899397 9899452 9899397 ID=MsG0880042516.01.T01:cds;Parent=MsG0880042516.01.T01
Chr8 CDS 9900284 9900366 9900284 ID=MsG0880042516.01.T01:cds;Parent=MsG0880042516.01.T01
Chr8 CDS 9900549 9900671 9900549 ID=MsG0880042516.01.T01:cds;Parent=MsG0880042516.01.T01
Chr8 CDS 9901567 9901644 9901567 ID=MsG0880042516.01.T01:cds;Parent=MsG0880042516.01.T01
Chr8 three_prime_UTR 9901645 9901723 9901645 ID=MsG0880042516.01.T01:three_prime_utr;Parent=MsG0880042516.01.T01
Chr8 three_prime_UTR 9901988 9902464 9901988 ID=MsG0880042516.01.T01:three_prime_utr;Parent=MsG0880042516.01.T01
Gene Sequence

>MsG0880042516.01.T01

ATGGTTTGTGGTTCTGTGTTTTGTGCTATGCCAGGTATGGATTTACAATTTGAGGTGGAAGAGGTTGAAGCTTTCGTGAAACAACCTGATGGTTCTATTTTCAGTTGGTGCGAGCGTTTTCATTGCTACTGTCATTTGATATATGGAATAGTAAACAACAGCAAATCAGTGATAACCCTTAAATTTGATGGAAAAGAAATCCATTGGGAAACGGGGAGAATGATTCAGAAATTGGAATCAGAGAACGTTGTCAAGCAAGTGTTTCCTTTACATGATGAAAAGACTAGAAAGAAACTTCTCAGGACTTGGGCTCTTCATTGGTGGGACTTCACGAGTCAGCCAATCGACGAGATTTATTCGTATTATGGGCAAAGGTTTGGGCTCACTGCTGTTTATCTTTTCGCCATTCAGTATATTACTAAGATTGGAGATTTCTTAGAGTTGGCGTTGCAGTTTGGAATGATTTTGATGTTTGCTTGCGCATTCCCACCTGCATTTGCTTTTGCTGCCGTGTCCCTTTCTGTTCAGAACAACATAATGGAAATCAGGACAGATGCCCTGAAGCTGCTAGTAATTTTGAGACGGCCTGTCCCTCGTGCCGCTGCGACCGTAGGAGCCTGGCTTAACATATTTCAGTTTCTCACAGTGATGTCAATTTGCACCAACTGTGCTCTTTTAGCTTGGTTATATGATGAGGAAGGGAATGAAAAGTAG
Protein sequence

>MsG0880042516.01.T01

MVCGSVFCAMPGMDLQFEVEEVEAFVKQPDGSIFSWCERFHCYCHLIYGIVNNSKSVITLKFDGKEIHWETGRMIQKLESENVVKQVFPLHDEKTRKKLLRTWALHWWDFTSQPIDEIYSYYGQRFGLTAVYLFAIQYITKIGDFLELALQFGMILMFACAFPPAFAFAAVSLSVQNNIMEIRTDALKLLVILRRPVPRAAATVGAWLNIFQFLTVMSICTNCALLAWLYDEEGNEK*