Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036595.01.T01 | AES77692.2 | 89.068 | 311 | 34 | 0 | 1 | 311 | 77 | 387 | 0 | 580 |
| MsG0780036595.01.T01 | AES77692.2 | 88.66 | 194 | 22 | 0 | 307 | 500 | 265 | 458 | 8.61E-113 | 352 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036595.01.T01 | Q940Z5 | 37.417 | 302 | 167 | 8 | 2 | 290 | 86 | 378 | 1.60E-58 | 203 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036595.01.T01 | G7L664 | 89.068 | 311 | 34 | 0 | 1 | 311 | 77 | 387 | 0.0 | 580 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048660.01 | MsG0780036595.01 | 0.854096 | 1.545085e-61 | 3.412776e-58 |
| MsG0080049002.01 | MsG0780036595.01 | 0.819023 | 1.443644e-52 | 1.098319e-49 |
| MsG0180000218.01 | MsG0780036595.01 | -0.803523 | 3.347777e-49 | 1.686095e-46 |
| MsG0180000241.01 | MsG0780036595.01 | 0.862142 | 6.248728e-64 | 1.811044e-60 |
| MsG0180000627.01 | MsG0780036595.01 | 0.842659 | 2.258616e-58 | 3.448005e-55 |
| MsG0180001105.01 | MsG0780036595.01 | 0.818721 | 1.690736e-52 | 1.275475e-49 |
| MsG0180004088.01 | MsG0780036595.01 | 0.831925 | 1.266410e-55 | 1.394394e-52 |
| MsG0180004246.01 | MsG0780036595.01 | 0.837508 | 4.988976e-57 | 6.494924e-54 |
| MsG0180004277.01 | MsG0780036595.01 | 0.828802 | 7.341415e-55 | 7.374462e-52 |
| MsG0180005617.01 | MsG0780036595.01 | 0.817031 | 4.070367e-52 | 2.931533e-49 |
| MsG0180005729.01 | MsG0780036595.01 | 0.811698 | 6.147154e-51 | 3.831098e-48 |
| MsG0180005730.01 | MsG0780036595.01 | 0.814858 | 1.243394e-51 | 8.437972e-49 |
| MsG0180005731.01 | MsG0780036595.01 | 0.808213 | 3.459309e-50 | 1.966345e-47 |
| MsG0180006054.01 | MsG0780036595.01 | 0.844859 | 5.822452e-59 | 9.525176e-56 |
| MsG0280010736.01 | MsG0780036595.01 | 0.833959 | 3.952821e-56 | 4.624277e-53 |
| MsG0280010807.01 | MsG0780036595.01 | 0.811584 | 6.507045e-51 | 4.043410e-48 |
| MsG0280010916.01 | MsG0780036595.01 | 0.833679 | 4.642422e-56 | 5.384844e-53 |
| MsG0280011255.01 | MsG0780036595.01 | 0.802897 | 4.511606e-49 | 2.236024e-46 |
| MsG0280011272.01 | MsG0780036595.01 | -0.806672 | 7.342236e-50 | 4.008868e-47 |
| MsG0280011404.01 | MsG0780036595.01 | 0.845982 | 2.890759e-59 | 4.903371e-56 |
| MsG0380014097.01 | MsG0780036595.01 | 0.802819 | 4.680849e-49 | 2.315417e-46 |
| MsG0380014103.01 | MsG0780036595.01 | 0.818077 | 2.366493e-52 | 1.753757e-49 |
| MsG0380014464.01 | MsG0780036595.01 | 0.836972 | 6.838893e-57 | 8.758454e-54 |
| MsG0680031108.01 | MsG0780036595.01 | 0.835931 | 1.259109e-56 | 1.562626e-53 |
| MsG0680033431.01 | MsG0780036595.01 | 0.817904 | 2.588162e-52 | 1.909022e-49 |
| MsG0680033465.01 | MsG0780036595.01 | 0.820286 | 7.432303e-53 | 5.855998e-50 |
| MsG0680034230.01 | MsG0780036595.01 | 0.805525 | 1.279714e-49 | 6.785401e-47 |
| MsG0680034480.01 | MsG0780036595.01 | 0.802482 | 5.493225e-49 | 2.693863e-46 |
| MsG0680034601.01 | MsG0780036595.01 | 0.816336 | 5.827320e-52 | 4.117896e-49 |
| MsG0680035580.01 | MsG0780036595.01 | 0.810668 | 1.027856e-50 | 6.234110e-48 |
| MsG0480018653.01 | MsG0780036595.01 | 0.800780 | 1.227354e-48 | 5.764473e-46 |
| MsG0480019711.01 | MsG0780036595.01 | 0.828110 | 1.078647e-54 | 1.062000e-51 |
| MsG0480020765.01 | MsG0780036595.01 | 0.820616 | 6.242783e-53 | 4.963697e-50 |
| MsG0480020832.01 | MsG0780036595.01 | 0.819279 | 1.262696e-52 | 9.673391e-50 |
| MsG0480020935.01 | MsG0780036595.01 | -0.837762 | 4.292374e-57 | 5.632489e-54 |
| MsG0480021060.01 | MsG0780036595.01 | 0.825585 | 4.326491e-54 | 3.960007e-51 |
| MsG0480022068.01 | MsG0780036595.01 | 0.811299 | 7.504048e-51 | 4.627845e-48 |
| MsG0480022579.01 | MsG0780036595.01 | 0.809772 | 1.604097e-50 | 9.502469e-48 |
| MsG0480023045.01 | MsG0780036595.01 | 0.829680 | 4.495726e-55 | 4.634198e-52 |
| MsG0480023150.01 | MsG0780036595.01 | 0.800550 | 1.367194e-48 | 6.384116e-46 |
| MsG0480023251.01 | MsG0780036595.01 | 0.836197 | 1.077777e-56 | 1.348695e-53 |
| MsG0480023488.01 | MsG0780036595.01 | 0.828212 | 1.019250e-54 | 1.006471e-51 |
| MsG0480023489.01 | MsG0780036595.01 | 0.836685 | 8.097683e-57 | 1.028062e-53 |
| MsG0480023890.01 | MsG0780036595.01 | 0.812362 | 4.405330e-51 | 2.795333e-48 |
| MsG0580024790.01 | MsG0780036595.01 | -0.815701 | 8.080040e-52 | 5.611119e-49 |
| MsG0580024997.01 | MsG0780036595.01 | 0.812287 | 4.574666e-51 | 2.896937e-48 |
| MsG0580025332.01 | MsG0780036595.01 | 0.812473 | 4.166237e-51 | 2.651543e-48 |
| MsG0580025407.01 | MsG0780036595.01 | -0.851412 | 9.026074e-61 | 1.825552e-57 |
| MsG0580025612.01 | MsG0780036595.01 | 0.859253 | 4.700111e-63 | 1.233331e-59 |
| MsG0580025661.01 | MsG0780036595.01 | 0.805881 | 1.077427e-49 | 5.765582e-47 |
| MsG0580025827.01 | MsG0780036595.01 | 0.825712 | 4.036168e-54 | 3.707805e-51 |
| MsG0580025832.01 | MsG0780036595.01 | 0.802570 | 5.268252e-49 | 2.589290e-46 |
| MsG0580025843.01 | MsG0780036595.01 | 0.837753 | 4.316655e-57 | 5.662492e-54 |
| MsG0580025987.01 | MsG0780036595.01 | 0.805051 | 1.608928e-49 | 8.427847e-47 |
| MsG0380015038.01 | MsG0780036595.01 | 0.803273 | 3.771793e-49 | 1.887340e-46 |
| MsG0380015049.01 | MsG0780036595.01 | 0.810779 | 9.726151e-51 | 5.916581e-48 |
| MsG0380015131.01 | MsG0780036595.01 | 0.820491 | 6.671119e-53 | 5.286113e-50 |
| MsG0380015277.01 | MsG0780036595.01 | 0.820897 | 5.379324e-53 | 4.311208e-50 |
| MsG0380015486.01 | MsG0780036595.01 | 0.820620 | 6.229792e-53 | 4.953814e-50 |
| MsG0380015896.01 | MsG0780036595.01 | 0.801548 | 8.548271e-49 | 4.093610e-46 |
| MsG0380016163.01 | MsG0780036595.01 | 0.812404 | 4.312730e-51 | 2.739783e-48 |
| MsG0380016285.01 | MsG0780036595.01 | 0.801489 | 8.790263e-49 | 4.203334e-46 |
| MsG0380016879.01 | MsG0780036595.01 | 0.811766 | 5.941182e-51 | 3.709539e-48 |
| MsG0380017202.01 | MsG0780036595.01 | 0.840401 | 8.890158e-58 | 1.264941e-54 |
| MsG0380017293.01 | MsG0780036595.01 | 0.824630 | 7.274800e-54 | 6.480308e-51 |
| MsG0480018236.01 | MsG0780036595.01 | 0.818591 | 1.809392e-52 | 1.360079e-49 |
| MsG0480018253.01 | MsG0780036595.01 | 0.815213 | 1.037173e-51 | 7.106339e-49 |
| MsG0480018301.01 | MsG0780036595.01 | 0.834545 | 2.816883e-56 | 3.353809e-53 |
| MsG0580027411.01 | MsG0780036595.01 | 0.804667 | 1.934923e-49 | 1.003568e-46 |
| MsG0580028406.01 | MsG0780036595.01 | 0.811157 | 8.056579e-51 | 4.950110e-48 |
| MsG0580028428.01 | MsG0780036595.01 | 0.842724 | 2.171072e-58 | 3.320931e-55 |
| MsG0580028445.01 | MsG0780036595.01 | 0.814137 | 1.795350e-51 | 1.194907e-48 |
| MsG0580029236.01 | MsG0780036595.01 | 0.820196 | 7.792204e-53 | 6.124761e-50 |
| MsG0580029376.01 | MsG0780036595.01 | 0.812366 | 4.396958e-51 | 2.790292e-48 |
| MsG0580029611.01 | MsG0780036595.01 | 0.802895 | 4.514269e-49 | 2.237278e-46 |
| MsG0580029880.01 | MsG0780036595.01 | 0.840808 | 6.957314e-58 | 1.002504e-54 |
| MsG0580030000.01 | MsG0780036595.01 | 0.827821 | 1.266165e-54 | 1.235978e-51 |
| MsG0580030088.01 | MsG0780036595.01 | 0.810785 | 9.698698e-51 | 5.900789e-48 |
| MsG0680030599.01 | MsG0780036595.01 | 0.824126 | 9.555505e-54 | 8.388899e-51 |
| MsG0680030616.01 | MsG0780036595.01 | 0.816964 | 4.213930e-52 | 3.029537e-49 |
| MsG0280006570.01 | MsG0780036595.01 | 0.805976 | 1.029212e-49 | 5.520996e-47 |
| MsG0280006601.01 | MsG0780036595.01 | 0.803344 | 3.645390e-49 | 1.827415e-46 |
| MsG0280007432.01 | MsG0780036595.01 | 0.836864 | 7.289195e-57 | 9.304544e-54 |
| MsG0280007877.01 | MsG0780036595.01 | 0.828643 | 8.023269e-55 | 8.022426e-52 |
| MsG0280007955.01 | MsG0780036595.01 | 0.816919 | 4.313234e-52 | 3.096826e-49 |
| MsG0280008152.01 | MsG0780036595.01 | 0.811792 | 5.864573e-51 | 3.664233e-48 |
| MsG0280008165.01 | MsG0780036595.01 | 0.824239 | 8.987652e-54 | 7.915591e-51 |
| MsG0280008171.01 | MsG0780036595.01 | 0.842340 | 2.744472e-58 | 4.148714e-55 |
| MsG0280008383.01 | MsG0780036595.01 | 0.819404 | 1.182128e-52 | 9.088189e-50 |
| MsG0280009169.01 | MsG0780036595.01 | 0.801536 | 8.597055e-49 | 4.115812e-46 |
| MsG0280009507.01 | MsG0780036595.01 | 0.815574 | 8.622655e-52 | 5.967125e-49 |
| MsG0280010349.01 | MsG0780036595.01 | 0.815831 | 7.557755e-52 | 5.266882e-49 |
| MsG0280010350.01 | MsG0780036595.01 | 0.813035 | 3.137792e-51 | 2.026799e-48 |
| MsG0680035707.01 | MsG0780036595.01 | 0.840243 | 9.778236e-58 | 1.384464e-54 |
| MsG0780036517.01 | MsG0780036595.01 | 0.852607 | 4.132201e-61 | 8.681415e-58 |
| MsG0780036593.01 | MsG0780036595.01 | 0.875447 | 3.060538e-68 | 1.429255e-64 |
| MsG0780036595.01 | MsG0780036596.01 | 0.866109 | 3.624381e-65 | 1.207477e-61 |
| MsG0780036595.01 | MsG0780036602.01 | 0.846762 | 1.772090e-59 | 3.082342e-56 |
| MsG0780036595.01 | MsG0780037395.01 | 0.811787 | 5.877698e-51 | 3.672018e-48 |
| MsG0780036595.01 | MsG0780037808.01 | 0.823782 | 1.150947e-53 | 1.000786e-50 |
| MsG0780036595.01 | MsG0780038334.01 | 0.820403 | 6.987329e-53 | 5.523605e-50 |
| MsG0780036595.01 | MsG0780038378.01 | 0.820696 | 5.985774e-53 | 4.769980e-50 |
| MsG0780036595.01 | MsG0780039323.01 | 0.833935 | 4.007353e-56 | 4.684806e-53 |
| MsG0780036595.01 | MsG0780039338.01 | 0.854029 | 1.615640e-61 | 3.560520e-58 |
| MsG0780036595.01 | MsG0780039432.01 | 0.811810 | 5.810688e-51 | 3.632378e-48 |
| MsG0780036595.01 | MsG0780039867.01 | -0.800130 | 1.664785e-48 | 7.691374e-46 |
| MsG0780036595.01 | MsG0780039976.01 | 0.826238 | 3.027163e-54 | 2.822839e-51 |
| MsG0780036595.01 | MsG0780040888.01 | 0.824992 | 5.976962e-54 | 5.379479e-51 |
| MsG0780036595.01 | MsG0780041074.01 | 0.877054 | 8.547473e-69 | 4.238217e-65 |
| MsG0780036595.01 | MsG0780041262.01 | 0.805759 | 1.143098e-49 | 6.098057e-47 |
| MsG0780036595.01 | MsG0780041468.01 | 0.848202 | 7.120828e-60 | 1.296708e-56 |
| MsG0780036595.01 | MsG0780041634.01 | 0.811136 | 8.140694e-51 | 4.999226e-48 |
| MsG0780036595.01 | MsG0780041767.01 | 0.825902 | 3.638475e-54 | 3.360759e-51 |
| MsG0780036595.01 | MsG0880041861.01 | 0.873946 | 9.909957e-68 | 4.379692e-64 |
| MsG0780036595.01 | MsG0880041863.01 | 0.833985 | 3.892588e-56 | 4.557498e-53 |
| MsG0780036595.01 | MsG0880041864.01 | 0.875180 | 3.774780e-68 | 1.746213e-64 |
| MsG0780036595.01 | MsG0880042516.01 | 0.815533 | 8.805508e-52 | 6.086917e-49 |
| MsG0780036595.01 | MsG0880042988.01 | 0.822648 | 2.117143e-53 | 1.782765e-50 |
| MsG0780036595.01 | MsG0880043037.01 | 0.827260 | 1.725468e-54 | 1.657301e-51 |
| MsG0780036595.01 | MsG0880043157.01 | 0.858679 | 6.982624e-63 | 1.796547e-59 |
| MsG0780036595.01 | MsG0880043313.01 | 0.800520 | 1.386588e-48 | 6.469818e-46 |
| MsG0780036595.01 | MsG0880043937.01 | 0.805312 | 1.418475e-49 | 7.480266e-47 |
| MsG0780036595.01 | MsG0880043941.01 | 0.803061 | 4.171967e-49 | 2.076223e-46 |
| MsG0780036595.01 | MsG0880044043.01 | 0.848893 | 4.585717e-60 | 8.540572e-57 |
| MsG0780036595.01 | MsG0880044379.01 | 0.821397 | 4.127146e-53 | 3.353859e-50 |
| MsG0780036595.01 | MsG0880045668.01 | 0.837043 | 6.560293e-57 | 8.419467e-54 |
| MsG0780036595.01 | MsG0880045992.01 | 0.815520 | 8.863360e-52 | 6.124895e-49 |
| MsG0780036595.01 | MsG0880046815.01 | 0.815042 | 1.132222e-51 | 7.721913e-49 |
| MsG0780036595.01 | MsG0880047055.01 | -0.807092 | 5.984882e-50 | 3.303554e-47 |
| MsG0780036595.01 | MsG0880047394.01 | 0.841042 | 6.038841e-58 | 8.764032e-55 |
| MsG0780036595.01 | MsG0880047538.01 | 0.823902 | 1.078806e-53 | 9.411843e-51 |
| MsG0780036595.01 | MsG0880047657.01 | 0.820981 | 5.144886e-53 | 4.133309e-50 |
| MsG0780036595.01 | MsG0880047758.01 | 0.833885 | 4.124435e-56 | 4.814181e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036595.01.T01 | MTR_7g014330 | 89.068 | 311 | 34 | 0 | 1 | 311 | 77 | 387 | 0.0 | 580 |
| MsG0780036595.01.T01 | MTR_7g014330 | 88.660 | 194 | 22 | 0 | 307 | 500 | 265 | 458 | 1.04e-116 | 352 |
| MsG0780036595.01.T01 | MTR_7g014250 | 86.581 | 313 | 42 | 0 | 1 | 313 | 77 | 389 | 0.0 | 573 |
| MsG0780036595.01.T01 | MTR_7g014250 | 86.598 | 194 | 26 | 0 | 307 | 500 | 265 | 458 | 4.99e-113 | 342 |
| MsG0780036595.01.T01 | MTR_7g014230 | 87.138 | 311 | 40 | 0 | 1 | 311 | 79 | 389 | 0.0 | 566 |
| MsG0780036595.01.T01 | MTR_7g014230 | 86.224 | 196 | 27 | 0 | 302 | 497 | 262 | 457 | 3.66e-112 | 340 |
| MsG0780036595.01.T01 | MTR_7g014360 | 77.492 | 311 | 50 | 1 | 1 | 311 | 27 | 317 | 2.72e-173 | 493 |
| MsG0780036595.01.T01 | MTR_7g014360 | 75.773 | 194 | 27 | 1 | 307 | 500 | 215 | 388 | 4.74e-91 | 283 |
| MsG0780036595.01.T01 | MTR_7g014310 | 62.143 | 280 | 52 | 2 | 32 | 311 | 29 | 254 | 1.40e-109 | 328 |
| MsG0780036595.01.T01 | MTR_7g014310 | 85.864 | 191 | 27 | 0 | 293 | 483 | 118 | 308 | 1.97e-108 | 325 |
| MsG0780036595.01.T01 | MTR_6g015315 | 45.215 | 303 | 153 | 6 | 1 | 299 | 78 | 371 | 3.77e-80 | 257 |
| MsG0780036595.01.T01 | MTR_6g015315 | 42.986 | 221 | 124 | 2 | 281 | 500 | 235 | 454 | 2.07e-51 | 181 |
| MsG0780036595.01.T01 | MTR_6g015320 | 44.805 | 308 | 147 | 9 | 1 | 301 | 81 | 372 | 7.70e-77 | 248 |
| MsG0780036595.01.T01 | MTR_6g015320 | 43.842 | 203 | 110 | 3 | 302 | 500 | 254 | 456 | 6.05e-45 | 164 |
| MsG0780036595.01.T01 | MTR_6g015830 | 43.910 | 312 | 157 | 8 | 2 | 305 | 86 | 387 | 1.45e-75 | 245 |
| MsG0780036595.01.T01 | MTR_6g015830 | 45.641 | 195 | 100 | 4 | 309 | 500 | 271 | 462 | 2.09e-47 | 171 |
| MsG0780036595.01.T01 | MTR_6g015815 | 42.444 | 311 | 160 | 7 | 2 | 304 | 86 | 385 | 6.46e-75 | 244 |
| MsG0780036595.01.T01 | MTR_6g015815 | 46.500 | 200 | 100 | 5 | 306 | 500 | 265 | 462 | 9.30e-49 | 174 |
| MsG0780036595.01.T01 | MTR_6g015850 | 43.087 | 311 | 160 | 7 | 1 | 305 | 85 | 384 | 1.37e-74 | 243 |
| MsG0780036595.01.T01 | MTR_6g015850 | 46.154 | 195 | 99 | 4 | 309 | 500 | 268 | 459 | 9.61e-49 | 174 |
| MsG0780036595.01.T01 | MTR_7g014205 | 78.626 | 131 | 17 | 1 | 337 | 467 | 1 | 120 | 6.04e-62 | 198 |
| MsG0780036595.01.T01 | MTR_7g014205 | 70.968 | 93 | 16 | 1 | 219 | 311 | 1 | 82 | 9.27e-36 | 129 |
| MsG0780036595.01.T01 | MTR_7g014210 | 86.957 | 115 | 14 | 1 | 356 | 469 | 24 | 138 | 3.94e-60 | 195 |
| MsG0780036595.01.T01 | MTR_7g014210 | 72.973 | 74 | 20 | 0 | 238 | 311 | 24 | 97 | 3.83e-28 | 110 |
| MsG0780036595.01.T01 | MTR_7g014610 | 39.032 | 310 | 171 | 8 | 2 | 296 | 84 | 390 | 2.26e-58 | 201 |
| MsG0780036595.01.T01 | MTR_7g014610 | 35.021 | 237 | 136 | 5 | 269 | 500 | 254 | 477 | 7.48e-35 | 136 |
| MsG0780036595.01.T01 | MTR_7g014200 | 39.474 | 304 | 170 | 9 | 2 | 296 | 85 | 383 | 9.04e-58 | 199 |
| MsG0780036595.01.T01 | MTR_7g014200 | 30.508 | 236 | 144 | 5 | 269 | 499 | 249 | 469 | 1.99e-27 | 115 |
| MsG0780036595.01.T01 | MTR_7g014160 | 38.065 | 310 | 172 | 10 | 2 | 296 | 85 | 389 | 4.80e-57 | 197 |
| MsG0780036595.01.T01 | MTR_7g014160 | 39.011 | 182 | 105 | 4 | 322 | 498 | 293 | 473 | 6.70e-33 | 131 |
| MsG0780036595.01.T01 | MTR_6g015310 | 44.000 | 250 | 119 | 9 | 1 | 242 | 26 | 262 | 6.84e-55 | 187 |
| MsG0780036595.01.T01 | MTR_6g015310 | 45.977 | 87 | 46 | 1 | 389 | 475 | 246 | 331 | 8.54e-16 | 79.0 |
| MsG0780036595.01.T01 | MTR_7g013850 | 35.312 | 320 | 175 | 11 | 2 | 296 | 84 | 396 | 2.04e-51 | 182 |
| MsG0780036595.01.T01 | MTR_7g013850 | 32.599 | 227 | 137 | 5 | 277 | 498 | 265 | 480 | 1.77e-30 | 124 |
| MsG0780036595.01.T01 | MTR_7g014620 | 35.430 | 302 | 164 | 7 | 2 | 296 | 70 | 347 | 1.18e-47 | 171 |
| MsG0780036595.01.T01 | MTR_7g014620 | 38.462 | 182 | 107 | 3 | 322 | 498 | 251 | 432 | 3.30e-27 | 114 |
| MsG0780036595.01.T01 | MTR_3g028210 | 29.836 | 305 | 186 | 5 | 9 | 297 | 90 | 382 | 7.64e-42 | 155 |
| MsG0780036595.01.T01 | MTR_3g028210 | 30.612 | 196 | 120 | 8 | 314 | 498 | 274 | 464 | 1.24e-20 | 95.1 |
| MsG0780036595.01.T01 | MTR_7g014630 | 40.201 | 199 | 106 | 4 | 2 | 191 | 85 | 279 | 5.24e-40 | 148 |
| MsG0780036595.01.T01 | MTR_8g012750 | 32.166 | 314 | 191 | 7 | 4 | 299 | 80 | 389 | 1.46e-39 | 149 |
| MsG0780036595.01.T01 | MTR_8g012750 | 33.158 | 190 | 113 | 5 | 322 | 498 | 284 | 472 | 2.24e-23 | 103 |
| MsG0780036595.01.T01 | MTR_2g089670 | 31.894 | 301 | 188 | 7 | 4 | 295 | 100 | 392 | 1.90e-38 | 146 |
| MsG0780036595.01.T01 | MTR_2g089670 | 35.644 | 202 | 123 | 4 | 298 | 494 | 274 | 473 | 1.66e-27 | 115 |
| MsG0780036595.01.T01 | MTR_7g015860 | 33.553 | 304 | 166 | 8 | 4 | 283 | 82 | 373 | 3.02e-38 | 145 |
| MsG0780036595.01.T01 | MTR_7g015860 | 33.161 | 193 | 101 | 4 | 318 | 493 | 274 | 455 | 1.10e-24 | 107 |
| MsG0780036595.01.T01 | MTR_2g089765 | 33.333 | 318 | 181 | 11 | 4 | 299 | 93 | 401 | 5.15e-38 | 145 |
| MsG0780036595.01.T01 | MTR_2g089765 | 37.097 | 186 | 104 | 3 | 321 | 494 | 294 | 478 | 2.73e-29 | 120 |
| MsG0780036595.01.T01 | MTR_3g087640 | 31.818 | 330 | 171 | 12 | 2 | 297 | 83 | 392 | 1.86e-37 | 144 |
| MsG0780036595.01.T01 | MTR_3g087640 | 28.996 | 269 | 162 | 7 | 241 | 498 | 222 | 472 | 9.86e-20 | 92.4 |
| MsG0780036595.01.T01 | MTR_2g089735 | 30.189 | 318 | 186 | 9 | 2 | 297 | 78 | 381 | 2.28e-37 | 143 |
| MsG0780036595.01.T01 | MTR_2g089735 | 35.052 | 194 | 98 | 5 | 322 | 500 | 283 | 463 | 2.34e-24 | 106 |
| MsG0780036595.01.T01 | MTR_2g089755 | 29.874 | 318 | 190 | 11 | 2 | 297 | 89 | 395 | 7.11e-35 | 136 |
| MsG0780036595.01.T01 | MTR_2g089755 | 31.720 | 186 | 117 | 4 | 322 | 500 | 295 | 477 | 5.40e-20 | 93.2 |
| MsG0780036595.01.T01 | MTR_2g089650 | 29.814 | 322 | 181 | 12 | 2 | 297 | 81 | 383 | 1.61e-34 | 135 |
| MsG0780036595.01.T01 | MTR_2g089650 | 28.634 | 227 | 145 | 5 | 284 | 500 | 246 | 465 | 7.09e-19 | 89.7 |
| MsG0780036595.01.T01 | MTR_7g014670 | 37.368 | 190 | 113 | 4 | 314 | 498 | 71 | 259 | 2.36e-33 | 127 |
| MsG0780036595.01.T01 | MTR_7g014670 | 35.238 | 105 | 64 | 2 | 196 | 296 | 71 | 175 | 2.54e-12 | 67.4 |
| MsG0780036595.01.T01 | MTR_3g435300 | 35.849 | 159 | 79 | 6 | 2 | 148 | 76 | 223 | 2.59e-20 | 91.3 |
| MsG0780036595.01.T01 | MTR_7g014180 | 43.956 | 91 | 51 | 0 | 2 | 92 | 83 | 173 | 2.13e-18 | 83.2 |
| MsG0780036595.01.T01 | MTR_8g096530 | 29.412 | 238 | 136 | 10 | 65 | 297 | 138 | 348 | 2.72e-15 | 78.6 |
| MsG0780036595.01.T01 | MTR_3g049150 | 25.490 | 306 | 182 | 9 | 41 | 326 | 106 | 385 | 7.00e-15 | 77.4 |
| MsG0780036595.01.T01 | MTR_3g098980 | 27.500 | 240 | 145 | 9 | 61 | 297 | 141 | 354 | 2.71e-14 | 75.1 |
| MsG0780036595.01.T01 | MTR_7g085930 | 26.357 | 258 | 147 | 6 | 48 | 286 | 119 | 352 | 3.06e-14 | 75.5 |
| MsG0780036595.01.T01 | MTR_3g026950 | 26.996 | 263 | 154 | 9 | 41 | 288 | 105 | 344 | 1.81e-13 | 72.8 |
| MsG0780036595.01.T01 | MTR_8g075610 | 25.203 | 246 | 148 | 9 | 41 | 278 | 98 | 315 | 8.08e-13 | 70.5 |
| MsG0780036595.01.T01 | MTR_7g085990 | 25.194 | 258 | 150 | 6 | 48 | 286 | 115 | 348 | 2.15e-12 | 69.3 |
| MsG0780036595.01.T01 | MTR_7g084940 | 24.286 | 280 | 183 | 8 | 23 | 297 | 105 | 360 | 1.34e-11 | 67.0 |
| MsG0780036595.01.T01 | MTR_7g027175 | 26.667 | 240 | 148 | 8 | 61 | 297 | 143 | 357 | 1.67e-11 | 66.6 |
| MsG0780036595.01.T01 | MTR_3g026310 | 27.857 | 140 | 95 | 2 | 322 | 455 | 264 | 403 | 3.02e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036595.01.T01 | AT5G39050 | 37.417 | 302 | 167 | 8 | 2 | 290 | 86 | 378 | 1.63e-59 | 203 |
| MsG0780036595.01.T01 | AT5G39050 | 34.409 | 186 | 113 | 5 | 318 | 498 | 286 | 467 | 2.29e-26 | 112 |
| MsG0780036595.01.T01 | AT5G39090 | 37.543 | 293 | 164 | 7 | 2 | 290 | 81 | 358 | 4.43e-59 | 202 |
| MsG0780036595.01.T01 | AT5G39090 | 35.676 | 185 | 109 | 6 | 320 | 498 | 267 | 447 | 5.81e-26 | 110 |
| MsG0780036595.01.T01 | AT3G29670 | 38.217 | 314 | 161 | 10 | 2 | 299 | 82 | 378 | 5.03e-58 | 199 |
| MsG0780036595.01.T01 | AT3G29670 | 34.653 | 202 | 112 | 5 | 310 | 500 | 259 | 451 | 7.09e-26 | 110 |
| MsG0780036595.01.T01 | AT5G39080 | 37.710 | 297 | 161 | 8 | 2 | 284 | 81 | 367 | 2.58e-56 | 195 |
| MsG0780036595.01.T01 | AT5G39080 | 35.870 | 184 | 103 | 6 | 318 | 494 | 282 | 457 | 1.76e-23 | 103 |
| MsG0780036595.01.T01 | AT3G29635 | 38.966 | 290 | 160 | 7 | 2 | 286 | 83 | 360 | 2.59e-56 | 194 |
| MsG0780036595.01.T01 | AT3G29635 | 37.624 | 202 | 118 | 6 | 302 | 498 | 256 | 454 | 9.01e-29 | 119 |
| MsG0780036595.01.T01 | AT5G61160 | 37.459 | 307 | 163 | 9 | 2 | 300 | 80 | 365 | 2.25e-55 | 192 |
| MsG0780036595.01.T01 | AT5G61160 | 37.879 | 198 | 112 | 6 | 308 | 500 | 261 | 452 | 7.88e-29 | 119 |
| MsG0780036595.01.T01 | AT3G29590 | 37.762 | 286 | 157 | 6 | 2 | 280 | 77 | 348 | 1.53e-53 | 187 |
| MsG0780036595.01.T01 | AT3G29590 | 35.533 | 197 | 110 | 5 | 313 | 498 | 258 | 448 | 5.63e-23 | 102 |
| MsG0780036595.01.T01 | AT3G29680 | 37.072 | 321 | 172 | 10 | 2 | 317 | 78 | 373 | 8.56e-50 | 177 |
| MsG0780036595.01.T01 | AT3G29680 | 34.715 | 193 | 113 | 6 | 308 | 494 | 258 | 443 | 2.24e-23 | 103 |
| MsG0780036595.01.T01 | AT1G03940 | 29.570 | 372 | 214 | 13 | 2 | 348 | 82 | 430 | 2.13e-40 | 152 |
| MsG0780036595.01.T01 | AT1G03940 | 34.500 | 200 | 115 | 5 | 313 | 498 | 267 | 464 | 8.75e-27 | 113 |
| MsG0780036595.01.T01 | AT1G03495 | 34.767 | 279 | 150 | 11 | 2 | 264 | 82 | 344 | 6.83e-38 | 142 |
| MsG0780036595.01.T01 | AT3G29720 | 35.885 | 209 | 110 | 6 | 23 | 223 | 26 | 218 | 8.55e-29 | 114 |
| MsG0780036595.01.T01 | AT3G29690 | 34.228 | 149 | 86 | 4 | 354 | 498 | 38 | 178 | 8.10e-18 | 81.6 |
| MsG0780036595.01.T01 | AT2G19070 | 24.809 | 262 | 160 | 8 | 40 | 288 | 108 | 345 | 2.53e-15 | 78.6 |
| MsG0780036595.01.T01 | AT3G47170 | 28.063 | 253 | 139 | 10 | 13 | 252 | 108 | 330 | 2.31e-13 | 72.8 |
| MsG0780036595.01.T01 | AT5G41040 | 26.271 | 236 | 142 | 9 | 68 | 297 | 167 | 376 | 1.99e-11 | 66.6 |
| MsG0780036595.01.T01 | AT5G41040 | 26.271 | 236 | 142 | 9 | 68 | 297 | 151 | 360 | 2.13e-11 | 66.2 |
| MsG0780036595.01.T01 | AT2G39980 | 27.941 | 204 | 136 | 6 | 256 | 455 | 236 | 432 | 5.24e-11 | 65.1 |
Find 79 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGATTCCTGCAACATATTT+TGG | 0.082485 | 7:-10218882 | MsG0780036595.01.T01:CDS |
| CCGACTCCTGCAACATATTT+TGG | 0.089197 | 7:-10218440 | MsG0780036595.01.T01:CDS |
| AGTGAGTTATTTGGAGAAAA+TGG | 0.218894 | 7:-10218822 | MsG0780036595.01.T01:CDS |
| TGGTTACTTGAAGGTCTTAA+TGG | 0.223870 | 7:-10218714 | MsG0780036595.01.T01:intron |
| TGTTGAAACAAGTGAGTTAT+TGG | 0.246021 | 7:-10218390 | MsG0780036595.01.T01:CDS |
| GCTGATTTCAATCATTTATC+TGG | 0.253026 | 7:-10219518 | MsG0780036595.01.T01:CDS |
| GTTCCAGAAGATTCATTTAG+AGG | 0.266808 | 7:-10219119 | MsG0780036595.01.T01:CDS |
| GAAACCATTTCAACTTTCTT+TGG | 0.266966 | 7:+10218173 | None:intergenic |
| GTTAAAACAAGTGAGTTATT+TGG | 0.270674 | 7:-10218831 | MsG0780036595.01.T01:CDS |
| GTACTATAAACCTCAAATTT+AGG | 0.281913 | 7:+10218215 | None:intergenic |
| CCAATTGAAAATCCGTAGTT+TGG | 0.297340 | 7:+10219395 | None:intergenic |
| CCAAACCATTAAGCTTCTAT+TGG | 0.298491 | 7:+10219151 | None:intergenic |
| AACAACCAATAGAAGCTTAA+TGG | 0.299594 | 7:-10219156 | MsG0780036595.01.T01:CDS |
| ATTATTTCAATTATCTCGTT+TGG | 0.307673 | 7:-10219096 | MsG0780036595.01.T01:CDS |
| GTTGAAACAAGTGAGTTATT+GGG | 0.310202 | 7:-10218389 | MsG0780036595.01.T01:CDS |
| CAATAGAAGCTTAATGGTTT+GGG | 0.310409 | 7:-10219150 | MsG0780036595.01.T01:CDS |
| AGGCAAAATATTTGAGTGAT+TGG | 0.318923 | 7:-10219193 | MsG0780036595.01.T01:CDS |
| CCCTTGATGAATTTGATGAT+TGG | 0.320166 | 7:+10219575 | None:intergenic |
| CCAATAGAAGCTTAATGGTT+TGG | 0.323690 | 7:-10219151 | MsG0780036595.01.T01:CDS |
| AATCCTCTAAATGAATCTTC+TGG | 0.330893 | 7:+10219116 | None:intergenic |
| TTTGGATATTGAAAAGCTTA+AGG | 0.336799 | 7:-10219078 | MsG0780036595.01.T01:CDS |
| TGAAGTATTAAGTGAAGCTT+TGG | 0.340658 | 7:-10218342 | MsG0780036595.01.T01:CDS |
| TGTCTTTCTGATTGTAGAAA+TGG | 0.347109 | 7:-10218128 | MsG0780036595.01.T01:CDS |
| GAGGTTTATAGTACTGATTT+TGG | 0.352559 | 7:-10218206 | MsG0780036595.01.T01:CDS |
| TTGTATCCATAGCTTATGCC+TGG | 0.358494 | 7:-10218547 | MsG0780036595.01.T01:CDS |
| ACATGAACAAGCTTCTGTTT+TGG | 0.364822 | 7:-10219438 | MsG0780036595.01.T01:CDS |
| CCAAAATATGTTGCAGGAAT+CGG | 0.365249 | 7:+10218882 | None:intergenic |
| GAGCTGAAAATTGGTCTTCA+TGG | 0.367514 | 7:-10218734 | MsG0780036595.01.T01:CDS |
| TCATGTGAAATATTCAAGTT+AGG | 0.378648 | 7:+10219455 | None:intergenic |
| AATTCACTTGTCAACATTTG+TGG | 0.379172 | 7:-10219009 | MsG0780036595.01.T01:CDS |
| ATTGGTTTGTGAGAATCATT+AGG | 0.380290 | 7:+10219593 | None:intergenic |
| CAATTTCCAAAATATGTTGC+AGG | 0.381633 | 7:+10218876 | None:intergenic |
| TGCTGGTTCACCTAAATTTG+AGG | 0.384622 | 7:-10218225 | MsG0780036595.01.T01:CDS |
| TAGGTTTGAATATCGATTGC+AGG | 0.392519 | 7:-10218920 | MsG0780036595.01.T01:CDS |
| CAATTTCCAAAATATGTTGC+AGG | 0.404618 | 7:+10218434 | None:intergenic |
| ATTTGTAGTGTCAAAACAAA+AGG | 0.406667 | 7:-10218612 | MsG0780036595.01.T01:intron |
| ATTTGTAGTGTCAAAACAAA+AGG | 0.406667 | 7:-10219054 | MsG0780036595.01.T01:CDS |
| TTAAAAGATGGAGTGTTGAA+TGG | 0.421534 | 7:-10218314 | MsG0780036595.01.T01:CDS |
| TGAAGTGTTGAGTGAAGCTT+TGG | 0.425405 | 7:-10218784 | MsG0780036595.01.T01:CDS |
| TGGTCTTCATGGTTACTTGA+AGG | 0.428251 | 7:-10218723 | MsG0780036595.01.T01:CDS |
| AAAACCAAAGAAAGTTGAAA+TGG | 0.434697 | 7:-10218177 | MsG0780036595.01.T01:CDS |
| AATGGTGATGGTGTTGAGAT+AGG | 0.443549 | 7:-10218110 | MsG0780036595.01.T01:CDS |
| ATTGCTGATGTTAAAGCAAT+TGG | 0.445735 | 7:-10218251 | MsG0780036595.01.T01:CDS |
| TGTTGAATGGAGCTGAAAAT+TGG | 0.446827 | 7:-10218743 | MsG0780036595.01.T01:CDS |
| GCTTTGGAAACTTTAAAAGA+TGG | 0.454178 | 7:-10218326 | MsG0780036595.01.T01:CDS |
| ATTACATTTCTATCATAGAA+AGG | 0.455442 | 7:+10219236 | None:intergenic |
| TGGTATCTATTGCTTATGCA+TGG | 0.464673 | 7:-10218989 | MsG0780036595.01.T01:CDS |
| ATAAAGAATGGAGTGTTGAA+TGG | 0.475613 | 7:-10218756 | MsG0780036595.01.T01:CDS |
| ACCAATCATCAAATTCATCA+AGG | 0.476412 | 7:-10219576 | MsG0780036595.01.T01:CDS |
| TTGAAACAAGTGAGTTATTG+GGG | 0.479171 | 7:-10218388 | MsG0780036595.01.T01:CDS |
| CAAGGATCCAAATGAATTTG+AGG | 0.481282 | 7:-10219213 | MsG0780036595.01.T01:CDS |
| CCAAAATATGTTGCAGGAGT+CGG | 0.485029 | 7:+10218440 | None:intergenic |
| ATGGTTTCAATAGATAGAAC+TGG | 0.486257 | 7:-10218158 | MsG0780036595.01.T01:CDS |
| GTTAAAGCAATTGGTGCTGC+TGG | 0.491334 | 7:-10218242 | MsG0780036595.01.T01:CDS |
| TGTCAAAACAAAAGGGTACT+AGG | 0.501108 | 7:-10218604 | MsG0780036595.01.T01:CDS |
| TGTCAAAACAAAAGGGTACT+AGG | 0.501108 | 7:-10219046 | MsG0780036595.01.T01:CDS |
| TTTGCTTCGCTCTTTGTCAA+AGG | 0.503257 | 7:-10218056 | MsG0780036595.01.T01:CDS |
| AGCTTTCATTCTGCATACCC+AGG | 0.512729 | 7:+10218529 | None:intergenic |
| TGGCTTTGAATATTGATTGT+CGG | 0.525216 | 7:-10218478 | MsG0780036595.01.T01:CDS |
| TTGAGTGATTGGTTAAAGCA+AGG | 0.525666 | 7:-10219182 | MsG0780036595.01.T01:CDS |
| CTATGATAGAAATGTAATCA+AGG | 0.525898 | 7:-10219231 | MsG0780036595.01.T01:CDS |
| CAACAAAAGTTGACAAGTGA+AGG | 0.526815 | 7:+10218567 | None:intergenic |
| GCTTTGGAAACTATAAAGAA+TGG | 0.532473 | 7:-10218768 | MsG0780036595.01.T01:CDS |
| TCTACAATCAGAAAGACAAA+AGG | 0.534606 | 7:+10218133 | None:intergenic |
| GCATACCCAGGCATAAGCTA+TGG | 0.548203 | 7:+10218541 | None:intergenic |
| TGTATCCATAGCTTATGCCT+GGG | 0.550290 | 7:-10218546 | MsG0780036595.01.T01:CDS |
| TTTGTAGTGTCAAAACAAAA+GGG | 0.558518 | 7:-10218611 | MsG0780036595.01.T01:intron |
| TTTGTAGTGTCAAAACAAAA+GGG | 0.558518 | 7:-10219053 | MsG0780036595.01.T01:CDS |
| TGGAGAAAATGGACTAATTG+TGG | 0.575913 | 7:-10218811 | MsG0780036595.01.T01:CDS |
| GGTATCTATTGCTTATGCAT+GGG | 0.580397 | 7:-10218988 | MsG0780036595.01.T01:CDS |
| CCAATCATCAAATTCATCAA+GGG | 0.585572 | 7:-10219575 | MsG0780036595.01.T01:CDS |
| AACTCAAGTGGCAAACAAAG+TGG | 0.614186 | 7:+10219263 | None:intergenic |
| TCTGATTGTAGAAATGGTGA+TGG | 0.615354 | 7:-10218122 | MsG0780036595.01.T01:CDS |
| AAATATGTTGCAGGAGTCGG+TGG | 0.620986 | 7:+10218443 | None:intergenic |
| AGTGATTGGTTAAAGCAAGG+TGG | 0.623091 | 7:-10219179 | MsG0780036595.01.T01:CDS |
| ATCAGCATGAGATTCAGCTA+TGG | 0.626225 | 7:+10219535 | None:intergenic |
| TAGAAAGGACAAAACTCAAG+TGG | 0.628772 | 7:+10219251 | None:intergenic |
| TGAAACAAGTGAGTTATTGG+GGG | 0.676029 | 7:-10218387 | MsG0780036595.01.T01:CDS |
| GGAAGATGGACTAATCGTGG+CGG | 0.752782 | 7:-10218366 | MsG0780036595.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTACATTTCTATCATAGAA+AGG | + | Chr7:10218421-10218440 | None:intergenic | 20.0% |
| !! | ATTATTTCAATTATCTCGTT+TGG | - | Chr7:10218558-10218577 | MsG0780036595.01.T01:CDS | 20.0% |
| !!! | AACTTCTTTTATCAAATCTT+GGG | - | Chr7:10218321-10218340 | MsG0780036595.01.T01:CDS | 20.0% |
| !!! | ACATATTTTGGAAATTGTAT+TGG | - | Chr7:10218784-10218803 | MsG0780036595.01.T01:CDS | 20.0% |
| !!! | TATTTTTGTTCATCATTACT+TGG | - | Chr7:10219370-10219389 | MsG0780036595.01.T01:CDS | 20.0% |
| ! | AAAACCAAAGAAAGTTGAAA+TGG | - | Chr7:10219477-10219496 | MsG0780036595.01.T01:CDS | 25.0% |
| ! | ATTTGTAGTGTCAAAACAAA+AGG | - | Chr7:10218600-10218619 | MsG0780036595.01.T01:CDS | 25.0% |
| ! | CTATGATAGAAATGTAATCA+AGG | - | Chr7:10218423-10218442 | MsG0780036595.01.T01:CDS | 25.0% |
| ! | GTACTATAAACCTCAAATTT+AGG | + | Chr7:10219442-10219461 | None:intergenic | 25.0% |
| ! | GTTAAAACAAGTGAGTTATT+TGG | - | Chr7:10218823-10218842 | MsG0780036595.01.T01:CDS | 25.0% |
| ! | TTTGGATATTGAAAAGCTTA+AGG | - | Chr7:10218576-10218595 | MsG0780036595.01.T01:CDS | 25.0% |
| ! | TTTGTAGTGTCAAAACAAAA+GGG | - | Chr7:10218601-10218620 | MsG0780036595.01.T01:CDS | 25.0% |
| !! | CAACTTCTTTTATCAAATCT+TGG | - | Chr7:10218320-10218339 | MsG0780036595.01.T01:CDS | 25.0% |
| !! | TATTTTGCCTCAAATTCATT+TGG | + | Chr7:10218451-10218470 | None:intergenic | 25.0% |
| !! | TCATGTGAAATATTCAAGTT+AGG | + | Chr7:10218202-10218221 | None:intergenic | 25.0% |
| !!! | CATTTTTAAGCTTTCTACAT+AGG | + | Chr7:10218351-10218370 | None:intergenic | 25.0% |
| !!! | TATTTTGGAAATTGTATTGC+AGG | - | Chr7:10219229-10219248 | MsG0780036595.01.T01:CDS | 25.0% |
| AAATCCGTAGTTTGGAAAAA+TGG | + | Chr7:10218254-10218273 | None:intergenic | 30.0% | |
| AACAACCAATAGAAGCTTAA+TGG | - | Chr7:10218498-10218517 | MsG0780036595.01.T01:CDS | 30.0% | |
| AATCCTCTAAATGAATCTTC+TGG | + | Chr7:10218541-10218560 | None:intergenic | 30.0% | |
| AATTCACTTGTCAACATTTG+TGG | - | Chr7:10218645-10218664 | MsG0780036595.01.T01:intron | 30.0% | |
| ACCAATCATCAAATTCATCA+AGG | - | Chr7:10218078-10218097 | MsG0780036595.01.T01:CDS | 30.0% | |
| AGGCAAAATATTTGAGTGAT+TGG | - | Chr7:10218461-10218480 | MsG0780036595.01.T01:CDS | 30.0% | |
| AGTGAGTTATTTGGAGAAAA+TGG | - | Chr7:10218832-10218851 | MsG0780036595.01.T01:CDS | 30.0% | |
| ATGGTTTCAATAGATAGAAC+TGG | - | Chr7:10219496-10219515 | MsG0780036595.01.T01:CDS | 30.0% | |
| ATTGCTGATGTTAAAGCAAT+TGG | - | Chr7:10219403-10219422 | MsG0780036595.01.T01:CDS | 30.0% | |
| CAATAGAAGCTTAATGGTTT+GGG | - | Chr7:10218504-10218523 | MsG0780036595.01.T01:CDS | 30.0% | |
| CAATTTCCAAAATATGTTGC+AGG | + | Chr7:10218781-10218800 | None:intergenic | 30.0% | |
| CCAATCATCAAATTCATCAA+GGG | - | Chr7:10218079-10218098 | MsG0780036595.01.T01:CDS | 30.0% | |
| GAAACCATTTCAACTTTCTT+TGG | + | Chr7:10219484-10219503 | None:intergenic | 30.0% | |
| GAGAACAAAAATGCTTTGAT+AGG | - | Chr7:10218715-10218734 | MsG0780036595.01.T01:CDS | 30.0% | |
| GTTGAAACAAGTGAGTTATT+GGG | - | Chr7:10219265-10219284 | MsG0780036595.01.T01:CDS | 30.0% | |
| TCTACAATCAGAAAGACAAA+AGG | + | Chr7:10219524-10219543 | None:intergenic | 30.0% | |
| TGTCTTTCTGATTGTAGAAA+TGG | - | Chr7:10219526-10219545 | MsG0780036595.01.T01:CDS | 30.0% | |
| TGTGTCTAACAAAAAAGCAA+TGG | - | Chr7:10219570-10219589 | MsG0780036595.01.T01:CDS | 30.0% | |
| TGTTGAAACAAGTGAGTTAT+TGG | - | Chr7:10219264-10219283 | MsG0780036595.01.T01:CDS | 30.0% | |
| TTGAAACAAGTGAGTTATTG+GGG | - | Chr7:10219266-10219285 | MsG0780036595.01.T01:CDS | 30.0% | |
| ! | GCTGATTTCAATCATTTATC+TGG | - | Chr7:10218136-10218155 | MsG0780036595.01.T01:CDS | 30.0% |
| ! | TGAAGTATTAAGTGAAGCTT+TGG | - | Chr7:10219312-10219331 | MsG0780036595.01.T01:CDS | 30.0% |
| ! | TTTTGTTCATCATTACTTGG+AGG | - | Chr7:10219373-10219392 | MsG0780036595.01.T01:CDS | 30.0% |
| !! | ATAAAGAATGGAGTGTTGAA+TGG | - | Chr7:10218898-10218917 | MsG0780036595.01.T01:CDS | 30.0% |
| !! | ATTGGTTTGTGAGAATCATT+AGG | + | Chr7:10218064-10218083 | None:intergenic | 30.0% |
| !! | GCTTTGGAAACTATAAAGAA+TGG | - | Chr7:10218886-10218905 | MsG0780036595.01.T01:CDS | 30.0% |
| !! | GCTTTGGAAACTTTAAAAGA+TGG | - | Chr7:10219328-10219347 | MsG0780036595.01.T01:CDS | 30.0% |
| !! | GTTACCATTTTTCCAAACTA+CGG | - | Chr7:10218247-10218266 | MsG0780036595.01.T01:CDS | 30.0% |
| !! | TGGCTTTGAATATTGATTGT+CGG | - | Chr7:10219176-10219195 | MsG0780036595.01.T01:CDS | 30.0% |
| !! | TTAAAAGATGGAGTGTTGAA+TGG | - | Chr7:10219340-10219359 | MsG0780036595.01.T01:CDS | 30.0% |
| !!! | GAGGTTTATAGTACTGATTT+TGG | - | Chr7:10219448-10219467 | MsG0780036595.01.T01:CDS | 30.0% |
| !!! | TATAGTACTGATTTTGGTTG+TGG | - | Chr7:10219454-10219473 | MsG0780036595.01.T01:CDS | 30.0% |
| ACTTGAAGGTCTTAATGGTT+TGG | - | Chr7:10218945-10218964 | MsG0780036595.01.T01:CDS | 35.0% | |
| CAACAAAAGTTGACAAGTGA+AGG | + | Chr7:10219090-10219109 | None:intergenic | 35.0% | |
| CAAGGATCCAAATGAATTTG+AGG | - | Chr7:10218441-10218460 | MsG0780036595.01.T01:CDS | 35.0% | |
| CCAAAATATGTTGCAGGAAT+CGG | + | Chr7:10218775-10218794 | None:intergenic | 35.0% | |
| CCAAACCATTAAGCTTCTAT+TGG | + | Chr7:10218506-10218525 | None:intergenic | 35.0% | |
| CCAATAGAAGCTTAATGGTT+TGG | - | Chr7:10218503-10218522 | MsG0780036595.01.T01:CDS | 35.0% | |
| CCAATTGAAAATCCGTAGTT+TGG | + | Chr7:10218262-10218281 | None:intergenic | 35.0% | |
| CTTGAAGGTCTTAATGGTTT+GGG | - | Chr7:10218946-10218965 | MsG0780036595.01.T01:CDS | 35.0% | |
| GGTATCTATTGCTTATGCAT+GGG | - | Chr7:10218666-10218685 | MsG0780036595.01.T01:intron | 35.0% | |
| GTTCCAGAAGATTCATTTAG+AGG | - | Chr7:10218535-10218554 | MsG0780036595.01.T01:CDS | 35.0% | |
| TAGAAAGGACAAAACTCAAG+TGG | + | Chr7:10218406-10218425 | None:intergenic | 35.0% | |
| TCTGATTGTAGAAATGGTGA+TGG | - | Chr7:10219532-10219551 | MsG0780036595.01.T01:CDS | 35.0% | |
| TGAAACAAGTGAGTTATTGG+GGG | - | Chr7:10219267-10219286 | MsG0780036595.01.T01:CDS | 35.0% | |
| TGAGAACAAAAATGCTCTGA+TGG | - | Chr7:10219156-10219175 | MsG0780036595.01.T01:CDS | 35.0% | |
| TGGTATCTATTGCTTATGCA+TGG | - | Chr7:10218665-10218684 | MsG0780036595.01.T01:intron | 35.0% | |
| TGGTTACTTGAAGGTCTTAA+TGG | - | Chr7:10218940-10218959 | MsG0780036595.01.T01:CDS | 35.0% | |
| TGTTGAATGGAGCTGAAAAT+TGG | - | Chr7:10218911-10218930 | MsG0780036595.01.T01:CDS | 35.0% | |
| ! | ACATGAACAAGCTTCTGTTT+TGG | - | Chr7:10218216-10218235 | MsG0780036595.01.T01:CDS | 35.0% |
| ! | CCAAACTACGGATTTTCAAT+TGG | - | Chr7:10218259-10218278 | MsG0780036595.01.T01:CDS | 35.0% |
| ! | CCCTTGATGAATTTGATGAT+TGG | + | Chr7:10218082-10218101 | None:intergenic | 35.0% |
| ! | TAGGTTTGAATATCGATTGC+AGG | - | Chr7:10218734-10218753 | MsG0780036595.01.T01:CDS | 35.0% |
| ! | TTGAGTGATTGGTTAAAGCA+AGG | - | Chr7:10218472-10218491 | MsG0780036595.01.T01:CDS | 35.0% |
| !! | TGGAGAAAATGGACTAATTG+TGG | - | Chr7:10218843-10218862 | MsG0780036595.01.T01:CDS | 35.0% |
| !! | TGTCAAAACAAAAGGGTACT+AGG | - | Chr7:10218608-10218627 | MsG0780036595.01.T01:intron | 35.0% |
| !!! | TCACATCATGCTGTTTTAGA+TGG | - | Chr7:10218289-10218308 | MsG0780036595.01.T01:CDS | 35.0% |
| AACTCAAGTGGCAAACAAAG+TGG | + | Chr7:10218394-10218413 | None:intergenic | 40.0% | |
| ATCAGCATGAGATTCAGCTA+TGG | + | Chr7:10218122-10218141 | None:intergenic | 40.0% | |
| CCAAAATATGTTGCAGGAGT+CGG | + | Chr7:10219217-10219236 | None:intergenic | 40.0% | |
| TGGTCTTCATGGTTACTTGA+AGG | - | Chr7:10218931-10218950 | MsG0780036595.01.T01:CDS | 40.0% | |
| TGTATCCATAGCTTATGCCT+GGG | - | Chr7:10219108-10219127 | MsG0780036595.01.T01:CDS | 40.0% | |
| TTGTATCCATAGCTTATGCC+TGG | - | Chr7:10219107-10219126 | MsG0780036595.01.T01:CDS | 40.0% | |
| TTTGCTTCGCTCTTTGTCAA+AGG | - | Chr7:10219598-10219617 | MsG0780036595.01.T01:CDS | 40.0% | |
| ! | AGTGATTGGTTAAAGCAAGG+TGG | - | Chr7:10218475-10218494 | MsG0780036595.01.T01:CDS | 40.0% |
| ! | CCGATTCCTGCAACATATTT+TGG | - | Chr7:10218772-10218791 | MsG0780036595.01.T01:CDS | 40.0% |
| !! | AATGGTGATGGTGTTGAGAT+AGG | - | Chr7:10219544-10219563 | MsG0780036595.01.T01:CDS | 40.0% |
| !! | GAGCTGAAAATTGGTCTTCA+TGG | - | Chr7:10218920-10218939 | MsG0780036595.01.T01:CDS | 40.0% |
| !! | TGAAGTGTTGAGTGAAGCTT+TGG | - | Chr7:10218870-10218889 | MsG0780036595.01.T01:CDS | 40.0% |
| !! | TGCTGGTTCACCTAAATTTG+AGG | - | Chr7:10219429-10219448 | MsG0780036595.01.T01:CDS | 40.0% |
| AAATATGTTGCAGGAGTCGG+TGG | + | Chr7:10219214-10219233 | None:intergenic | 45.0% | |
| AGCTTTCATTCTGCATACCC+AGG | + | Chr7:10219128-10219147 | None:intergenic | 45.0% | |
| AGTGAGTTATTGGGGGAAGA+TGG | - | Chr7:10219274-10219293 | MsG0780036595.01.T01:CDS | 45.0% | |
| ! | CCGACTCCTGCAACATATTT+TGG | - | Chr7:10219214-10219233 | MsG0780036595.01.T01:CDS | 45.0% |
| !! | GTTAAAGCAATTGGTGCTGC+TGG | - | Chr7:10219412-10219431 | MsG0780036595.01.T01:CDS | 45.0% |
| GCATACCCAGGCATAAGCTA+TGG | + | Chr7:10219116-10219135 | None:intergenic | 50.0% | |
| !! | GGAAGATGGACTAATCGTGG+CGG | - | Chr7:10219288-10219307 | MsG0780036595.01.T01:CDS | 50.0% |
| !! | GGGGGAAGATGGACTAATCG+TGG | - | Chr7:10219285-10219304 | MsG0780036595.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 10218043 | 10219633 | 10218043 | ID=MsG0780036595.01;Name=MsG0780036595.01 |
| Chr7 | mRNA | 10218043 | 10219633 | 10218043 | ID=MsG0780036595.01.T01;Parent=MsG0780036595.01;Name=MsG0780036595.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0|0|1|1|1|2|0|500 |
| Chr7 | exon | 10218715 | 10219633 | 10218715 | ID=MsG0780036595.01.T01:exon:1606;Parent=MsG0780036595.01.T01 |
| Chr7 | exon | 10218043 | 10218626 | 10218043 | ID=MsG0780036595.01.T01:exon:1605;Parent=MsG0780036595.01.T01 |
| Chr7 | CDS | 10218715 | 10219633 | 10218715 | ID=MsG0780036595.01.T01:cds;Parent=MsG0780036595.01.T01 |
| Chr7 | CDS | 10218043 | 10218626 | 10218043 | ID=MsG0780036595.01.T01:cds;Parent=MsG0780036595.01.T01 |
| Gene Sequence |
| Protein sequence |
